Biotechnology Commons^™

Hepatic Targets To Control Blood Glucose And Potentially Aid In The Treatment Of Diabetes, Rena A. Velissarios

PANDION: The Osprey Journal of Research and Ideas

Maintaining glucose homeostasis is extremely important to remain in good health and prevent disease. This homeostasis is achieved via the regulation of hepatic metabolic pathways like gluconeogenesis and glycogenesis by insulin, which is expressed during high blood glucose. Insulin is responsible for facilitating the uptake of glucose into other tissues from the blood, as well as signaling whether to stimulate or slow glucose metabolism in the liver. Hyperglycemia is one of the main effects of diabetes, a disease characterized by the body’s inability to produce or respond to insulin. Without insulin, hepatic glucose output continues and blood glucose accumulates, causing …

An Experiment Study On Implementing Syngas On A Small Generator Set, Bui Van Chinh, Khong Vu Quang, Khanh Nguyen Duc

ASEAN Journal on Science and Technology for Development

This paper presents an experiment on syngas's influence on the performance and pollutant characteristics of a mechanical diesel engine generator set. Using syngas as an external fuel is good for medium and light loads of less than 80%. While a moderate substitution of syngas will contribute to good performance at high loads, a larger level of syngas provided may degrade engine performance. The brake-specific energy consumption rises as the replacement syngas flow increases. Using syngas as an external fuel to substitute for a part of the diesel might cause the engine to perform unstablely. The more syngas replacements, the greater …

Advances In Biomedical Research And Treatments: What Is Acceptable?, Michael L. Clancy, Khalid M. Iskandarani, Mitchell C. Mccrea

Journal of Health Ethics

This study investigated the technology acceptance (TA) of twenty-first century biomedical treatments by adults in the United States. A new TA instrument was created, using five distinct levels: (1) Healing and Prevention, (2) Replacement Organs, (3) Enhancements-Medical, (4) Enhancements-Discretionary, and (5) Transhumans. An on-line survey produced 353 usable responses, which showed distinct patterns for each of five biomedical treatment levels. There was clear support for Levels 1–3, but very strong opposition to Levels 4–5. The TA finding draws the line between which human interventions are acceptable versus others that should be prohibited through public policies and medical guidelines.

Formulation And Evaluation Of In-Vitro Anti-Cancer Activity Of Iron Nanoparticles On Mcf-7 & A-475 Cells, Sarad Pawar Naik Bukke, Arigela Bharathi, Tenpattinam Shanmugam Saraswathi, Yenumula Nettikallu, Shanmugam Vippamakula

AUIQ Complementary Biological System

Nanomedicine is an interdisciplinary field within the developing nano medication delivery system. Ayurveda, a traditional form of healing, employs nanoparticles known as Bhasmas. Nanoparticles can be selectively designed to simultaneously deliver many medications. This innovative functionality enables meticulous regulation of drug release, therefore obviating the necessity for intricate dosing schedules. This enhances patient compliance with treatment. The aim of this work is to synthesise iron nanoparticles using an environmentally friendly process, evaluate the quality of the produced nanoparticles, and examine their possible anti-cancer properties by in-vitro experimental testing utilizing MCF-7 and A-475 cell lines. To produce neem leaf extract, fresh …

Antimicrobial Properties Of Jasminum Sambac Linn Leave Extract On Selected Oral Associated Pathogen, Sarah Saiful Rizal, Wan Razarinah Wan Abdul Razak

AUIQ Complementary Biological System

Traditional medicine using Jasminum leaves to treat oral health problems is expected due to easy access. Furthermore, due to the rising issue of antibiotic resistance, discovering a natural antibiotic that can effectively replace synthetic antibiotics would be valuable as natural antibiotics can cover the benefits, challenges, and future development. This study aims to assess the antimicrobial properties of ethanolic and aqueous extracts of Jasminum sambac L. leaves at the concentration of 50, 150, and 250 mg/ml against E. coli ATCC 25922, P. aeruginosa ATCC 10145, S. aureus ATCC 33591 and B. cereus ATCC 11778, C. albicans ATCC 10231 and A. …

Potential Of Critical Mineral And Cytotoxicity Activity Of Gadolinium Complex As Anti-Amoebic Agent By Viability Studies And Flow Cytometry Techniques, Eny Kusrini, Fatimah Hashim, Azrina Aziz, Muhamad Fairus Noor Hassim, Anwar Usman, Lee D. Wilson, El-Sayed Negim, Agus Budi Prasetyo

AUIQ Complementary Biological System

The screening of lanthanide as a critical mineral and used as an anti-amoebic agent is important to identify the safest method and mode of cell death to eliminate this microorganism from the host. In this study, gadolinium ion (Gd³⁺) that complexed with a short acyclic triethylene glycol (EO3) and in the presence of picric acid (HPic) as counter anion for anti-amoebic activity was explored. The trivalent Gd³⁺ complexed with EO3 and HPic via one-pot synthesis reaction using a mole ratio of gadolinium nitrate salt, EO3 ligand and HPic in a mole ratio 1:3:4 to produce [Gd(Pic)_{2 …}

Synergistic Effects Of Biological Stimuli And Flexion Induce Microcavities Promote Hypertrophy And Inhibit Chondrogenesis During In Vitro Culture Of Human Mesenchymal Stem Cell Aggregates, Bo Zhang, Jim Berilla, Sungwoo Cho, Rodrigo A. Somoza, Jean F. Welter, Harihara Baskaran

Faculty Scholarship

Interzone/cavitation are key steps in early stage joint formation that have not been successfully developed in vitro. Further, current models of endochondral ossification, an important step in early bone formation, lack key morphology morphological structures such as microcavities found during development in vivo. This is possibly due to the lack of appropriate strategies for incorporating chemical and mechanical stimuli that are thought to be involved in joint development. We designed a bioreactor system and investigated the synergic effect of chemical stimuli (chondrogenesis-inducing [CIM] and hypertrophy-inducing medium [HIM]) and mechanical stimuli (flexion) on the growth of human mesenchymal stem cells (hMSCs) …

Shining Light On The Invisible: Fluorescent Detection Of Reactive Oxygen Species, Alex Zuo

Research Colloquium

Background

Reactive oxygen species (ROS) play an important role in cell signaling and homeostasis. However, overproduction of ROS leads to oxidative stress, as well as other related diseases, including cancer, neurodegenerative diseases, and cardiovascular disorders. Conventional ROS detection methods are limited by their low sensitivity and low specificity in real-time measurements. Fluorescent probes can offer valuable tools to detect ROS in biological systems. This study is focused on the detection of ROS formation during hypoxia and reoxygenation.

Methods

We used fluorescence detection techniques to study ROS in isolated rodent skeletal muscle models, which were exposed to alternating hyperoxia and hypoxia. …

Efficient Cold-Active Extremozyme For Aldehydes Monitoring, Georgiana Necula-Petrareanu, Paris Lavin, Alina Vasilescu, Cristina Purcarea

FRONTIERS UNBOUND: Exploring Extreme Environments

No abstract provided.

Developing Coexpression Systems To Introduce Hydroxyproline Into Protein Engineered Collagen Peptides Utilizing Hydroxylase From Acanthamoeba Polyphaga Mimivirus, Jennifer Soldatich

Theses and Dissertations

A major challenge of developing collagen mimetic peptides (CMPs) by bacterial expression is to include hydroxyproline for biomedical applications. Coexpression of Prolyl-4-hydroxylase from A.mimivirus with CMPs was investigated. Additionally, four expression designs were created for potential applications in mammalian cells to utilize their natural ability of proline-hydroxylation by post-translational modification.

Revitalizing Biotechnological Advancement In The United States: Patent Eligibility Reform To Promote Innovation While Preserving Morality, Sydney Virtue

West Virginia Law Review

Patent protection has long been recognized as a key part of promoting innovation; however, current patent eligibility law in the United States often produces the exact opposite result. While the basic framework for patent eligibility is provided by the Patent Act, the United States Supreme Court has crafted several significant exceptions to patent eligibility—laws of nature, natural phenomena, and abstract ideas. These judicial exceptions have created a crisis in patent law and impeded biotechnological innovation, as they are too vague to be properly confined and carry tests that are too ambiguous for predictable application. To promote and retain world leadership …

A P-Graph Approach For Planning Sustainable Rice Straw Management Networks, Victoria Migo Sumagang Maria, Michael Angelo B. Promentilla

The Philippine Agricultural Scientist

The Philippines produces up to 15.2 Mt of rice straw waste annually. Unmanaged rice straw waste disposal can lead to pollution from open field burning. On the other hand, rice straw agricultural waste can be used sustainably to produce valuable products such as mushrooms, fodder, pellets, or bioenergy, in a rice straw management system. Such systems can be optimized using Process Integration tools so that the raw materials are used efficiently at the maximum profit and with a minimal carbon footprint. The P-graph framework is an efficient Process Integration tool that solves Process Network Synthesis problems. A P-graph finds the …

Development Of Collagen Mimetic Mini-Fibrils With Tunable Collagenase Susceptibility, Jui Chaugule

Dissertations, Theses, and Capstone Projects

Collagen fibrils are the primary molecular scaffold of all connective tissues and provide the essential support for cell migration and differentiation. Collagen fibrils represent one of the most complex molecular hierarchies: three polypeptide chains in Gly-Xaa-Yaa repeating amino acid sequences, first form the rod-shaped collagen triple helix. These triple helices further self-assemble laterally in a specific manner to form fibrils having the characteristic 67 nm axially repeating structure known as the D-period. Enzymatic digestion of collagen fibrils by matrix metalloproteinases (MMPs) is critical for several physiological processes and is of particular consequence during wound healing. Many of the mechanisms of …

Improving Bovine Intracytoplasmic Sperm Injection, Lauren Gatenby

LSU Doctoral Dissertations

Despite large efforts, there has been minimal improvements in bovine intracytoplasmic sperm injection (ICSI) in the last few decades. In this study, we investigate methods to improve embryo development rates with ICSI in cattle through addressing sperm and oocyte factors and modifying injection methods. Inducing the acrosome reaction in bull sperm prior to injection with progesterone increased cleavage (46.2% vs 16.2%) and blastocyst (21% vs 3.8%) rates compared to controls, respectively. Supplementing glutathione during in vitro maturation of the oocyte did reduce free reactive oxygen species (ROS) in the oocyte, but did not improve embryo development rates with ICSI or …

Molecular Characterization Of Viral Escape From Art And Crispr Hiv-1 Excision In Infected Humanized Mice, Chen Zhang

Theses & Dissertations

Not available.

Evaluating The Effect Of Plantlet Age And Trichoderma Spp. Application On Acclimatization Of Boehmeria Nivea L. Gaud, Eva Aprilia, Anne Nuraini, Muhamad Kadapi

Jurnal Kultivasi

One of the crucial stages in the ramie plant (Boehmeria nivea L. Gaud) tissue culture is the acclimatization phase, which transitions between the in vitro and ex-vitro environments. Determining the appropriate age of plantlets and providing nutrients in the substrate play significant roles in the success of acclimatization. This research is conducted to determine the most suitable age of plantlets for acclimatization and assess the impact of providing nutrients through Trichoderma spp. application on the growth of ramie seedlings during the acclimatization phase. The experiment was conducted between January and March 2023 at the Screenhouse Bale Tatanen, Faculty of Agriculture, …

Activated Carbon Derived From Rice Husk Biomass Using Pyrolysis-Assisted Tartaric Acid Activation For Removal Of Reactive Orange 16 Dye: Adsorption Modeling Using Response Surface Methodology, Ahmed Saud Abdulhameed, Ruihong Wu, Abdallah Reghioua, Harun M. Mbuvi, Zaher Mundher Yaseen, Zaharaddeen N. Garba

AUIQ Complementary Biological System

In the current work, rice husk (RH) biomass was pyrolyzed using tartaric acid as an activating agent to produce activated carbon (AC). For 60 min, the procedure was run at 700 °C and 5 L/min of nitrogen (N₂) flow rate. The study used response surface methodology (RSM) and a 3-level Box-Behnken design (BBD) to optimize the extraction efficiency of rice husk activated carbon (RHAC) in eliminating reactive orange 16 (RO16) dye from an aqueous solution. Different process parameters, such as pH (2–12), RHAC dose (0.04 – 0.14 g), and time (60-240 min), were chosen as part of the …

Oil Palm Fronds Activated Carbon Via Microwave-Assisted H3po4 Activation: Box-Behnken Optimization For Crystal Violet Dye Removal, Nur Atirah Shamsudin, Qistina Omar, Ismaniza Ismail, Noor Artika Hassan, Syarifah Abd Rahim, Nur Fazreen Dzulkafli, Ruihong Wu, Soon Kong Yong

AUIQ Complementary Biological System

The extensive use of crystal violet (CV) dyes may cause water pollution. A highly porous and functionalized activated carbon can be used for adsorption of CV dyes. Activated carbon was prepared from oil palm fronds through microwave-assisted pyrolysis and activation with phosphoric acid (H₃PO₄) for removal of CV dye from wastewater. The physico-chemical characteristics of oil palm fronds activated carbon (OPFAC) was employed by Brunauer-Emmett-Teller (BET) surface area analysis, Fourier transform infrared (FT-IR) analysis, Scanning Electron Methodology-Energy Dispersive X-Ray (SEM-EDX) analysis, thermogravimetric analysis (TGA), and point of zero charges (pH_pzc). The adsorption parameters such …

Impact Of Some Parameters On The Survival And Proliferation Of Foodborne Pathogens: Escherichia Coli, Bacillus Subtilis, Staphylococcus Aureus, And Streptococcus Pyogenes, Hassan Agha, Ahmed Bashir Sanaalla, Muhanad Abdullah Salim Abdulsamad, Maroua Abderrahmane Salhi, Ghada Abdu-Razzaq Mohammad, Abdulmutalib Alabeed Alkamil Allaq

AUIQ Complementary Biological System

Food poisoning caused by foodborne microorganisms is a significant public health concern. This study aims to investigate the impact of several nutritional and environmental parameters on the growth of Escherichia coli, Bacillus subtilis, Staphylococcus aureus, and Streptococc pyogenes in both model systems and food. The specific impact of temperature, pH, and UV light stress on pathogens.Applying physical stress on microorganisms is a standard method to induce cell inactivation and promote food stability.This study found that the optimal temperature for the growth of these pathogens is between 30°C and 50°C. No growth was observed beyond 50°C, indicating temperature sensitivity; low temperatures …

Advancement In In-Silico Drug Discovery From Virtual Screening Molecular Dockings To De-Novo Drug Design Transformer-Based Generative Ai And Reinforcement Learning, Dony Ang

Computational and Data Sciences (PhD) Dissertations

The field of drug discovery has seen remarkable advancements over the past few decades, transitioning from traditional experimental methods to highly sophisticated computational approaches. One of the pivotal techniques in this evolution is virtual screening, which utilizes molecular docking to predict the interaction between small molecules and target proteins. This method has significantly accelerated the initial stages of drug discovery by enabling the high-throughput screening of large chemical libraries. By simulating the binding affinity and stability of potential drug candidates, virtual screening has become a cornerstone in identifying promising compounds for further development.

A notable application of virtual screening was …

Epidural Stimulation For Urogenital Dysfunction In The Spinal Cord Injured Rat., Natasha Lorraine Wilkins

Electronic Theses and Dissertations

Spinal cord injury (SCI) is a devastating, life changing event that greatly impacts quality of life. SCI can have body-wide, multi-system consequences including dysfunction within the urogenital system. Challenges with the urinary system include urinary incontinence, urine retention, and detrusor-sphincter dyssynergia all of which require maintenance through the regular use of catheters. Sexual dysfunction in men, who comprise nearly 80% of the SCI population, includes erectile dysfunction, anejaculation, retrograde ejaculation, poor expulsive force during ejaculation, and poor sperm quality. The treatment for sexual function in SCI men is focused more on fertility through the collection of sperm for insemination procedures …

Early Onset Alzheimer’S Disease Markers In Mouse Hippocampus Unveiled By Single-Cell Transcriptomic Analysis Following Cranial Radiotherapy, Tuba Aksoy

Dissertations and Theses (Open Access)

Cranial radiation therapy plays an integral role in the treatment of brain tumors but can lead to progressive cognitive deficits in survivors by mechanisms that are poorly understood. To develop preventive or mitigative strategies, it is crucial to better understand the underlying pathogenesis of radiation-induced cognitive impairments. The study investigated single-cell transcriptomics and DNA methylation changes as potential drivers of persistent cellular dysfunction after radiation exposure, specifically concentrating on the CA1-3 regions of the hippocampus and the prefrontal cortex due to their role in cognitive functions. Thirteen-week-old mice underwent whole-brain radiation at clinically relevant doses. Following whole-brain radiation, an assessment …

Enhancing Crop Resilience: Physiological And Omics Approaches For Drought And Heat Stress Tolerance In Soybean And Peanut, Jyoti Prasad Kakati

All Dissertations

Soybean and peanut are two major crops globally grown for oil and protein. Climate change-associated factors like drought and increased temperature (heat stress) challenge the global production of soybeans and peanuts. Though the United States is the second-largest producer of soybean and the fourth-largest producer of peanuts, it still faces production constraints associated with drought and heat stresses. In the present study, we have examined the responses of soybean and peanut plants to drought and heat stresses during germination and reproductive phases. We conducted field and controlled environmental studies to elucidate the impact of drought stress on germination and seedling …

Exploring Chilling Stress And Recovery Dynamics In C4 Perennial Grass Of Miscanthus Sinensis, Karolina Sobańska, Monika Mokrzycka, Martyna Przewoźnik, Tomasz Pniewski, Katarzyna Glowacka

Department of Biochemistry: Faculty Publications

The increasing cultivation of perennial C4 grass known as Miscanthus spp. for biomass production holds promise as a sustainable source of renewable energy. Unlike the sterile triploid hybrid of M. × giganteus, which cannot reproduce through seeds, M. sinensis possesses attributes that could potentially address these limitations by effectively establishing itself through seed propagation. This study aimed to investigate how 18 genotypes of M. sinensis respond to chilling stress and subsequent recovery. Various traits were measured, including growth and biomass yield, the rate of leaf elongation, and a variety of chlorophyll fluorescence parameters, as well as chlorophyll …

Ocular Gene Transfer In The Spotlight: Implications Of Newspaper Content For Clinical Communications, Shelly Benjaminy, Tania M. Bubela

Office of the Provost

Background: Ocular gene transfer clinical trials are raising hopes for blindness treatments and attracting media attention. News media provide an accessible health information source for patients and the public, but are often criticized for overemphasizing benefits and underplaying risks of novel biomedical interventions. Overly optimistic portrayals of unproven interventions may influence public and patient expectations; the latter may cause patients to downplay risks and over-emphasize benefits, with implications for informed consent for clinical trials. We analyze the news media communications landscape about ocular gene transfer and make recommendations for improving communications between clinicians and potential trial participants in light of …

Five Side Populations Isolated From Rat Bone Marrow‑Derived Mesenchymal Stem Cells, Dalia Al Saied Moustafa Ahmed, Mahmoud Elhussiny Salama, Ahmed Abdou Emam, Sara Mohamed Farrag, Basma Hamed Othman, Shaimaa Hassan Haiba, Mohamed Mosaad Salama

Faculty Journal Articles

Over the past decade, there has been marked enthusiasm surrounding the potential application of mesenchymal stem cells (MSCs) as universally compatible donor cells in the field of regenerative medicine. Due to their distinctive immune-tolerant characteristics, these entities hold promise for potential applications in cell replacement, gene therapy and immunomodulatory therapy. MSCs have been defined and characterized based on adhesion properties and different surface markers that are negative for hematopoietic stem cells and positive for MSCs, and their capacity for differentiation into osteocyte, chondrocyte and adipocyte is observed under suitable circumstances. However, this protocol is costly and time-consuming and cannot confirm …

Type-2 Diabetes, Pancreatic Amylin, And Neuronal Metabolic Remodeling In Alzheimer's Disease, Noah Leibold, James R. Bain, Florin Despa

Neurology Faculty Publications

Type-2 diabetes raises the risk for Alzheimer’s disease (AD)-type dementia and the conversion from mild cognitive impairment to dementia, yet mechanisms connecting type-2 diabetes to AD remain largely unknown. Amylin, a pancreatic 𝜷-cell hormone co-secreted with insulin, participates in the central regulation of satiation, but also forms pancreatic amyloid in persons with type-2 diabetes and synergistically interacts with brain amyloid 𝜷 (A𝜷) pathology, in both sporadic and familial Alzheimer’s disease (AD). Growing evidence from studies of tumor growth, together with early observations in skeletal muscle, indicates amylin as a potential trigger of cellular metabolic reprogramming. Because the blood, cerebrospinal fluid, …

Diffuse Reflectance Spectroscopy For Optical Characterizations Of Orthotopic Head And Neck Cancer Models In Vivo, Pranto Soumik Saha, Jing Yan, Caigang Zhu

Markey Cancer Center Faculty Publications

We demonstrated an easy-to-build, portable diffuse reflectance spectroscopy device along with a Monte Carlo inverse model to quantify tissue absorption and scattering-based parameters of orthotopic head and neck cancer models in vivo. Both tissue-mimicking phantom studies and animal studies were conducted to verify the optical spectroscopy system and Monte Carlo inverse model for the accurate extraction of tissue optical properties. For the first time, we reported the tissue absorption and scattering coefficients of mouse normal tongue tissues and tongue tumor tissues. Our in vivo animal studies showed reduced total hemoglobin concentration, lower tissue vascular oxygen saturation, and increased tissue scattering …

Dynamic Metabolic Flux Analysis Amidst Data Variability: Sphingolipid Biosynthesis Case Study In Arabidopsis Thaliana Cell Cultures, Abraham Boluwatife Osinuga

Department of Chemical and Biomolecular Engineering: Dissertations, Theses, and Student Research

Sphingolipids are pivotal for plant development and stress responses. Growing interest has been directed towards fully comprehending the regulatory mechanisms of the sphingolipid pathway. In this study, we explore its de novo biosynthesis and homeostasis in Arabidopsis thaliana cell cultures, shedding light on fundamental metabolic mechanisms. Employing ¹⁵N isotope labeling and quantitative dynamic modeling approach, we obtained data with notable variations and developed a regularized and constraint-based Dynamic Metabolic Flux Analysis (r-DMFA) framework to predict metabolic shifts due to enzymatic changes. Our analysis revealed key enzymes such as sphingoid-base hydroxylase (SBH) and long-chain-base kinase …

Exploring The Coffee Genome: A Comprehensive Analysis Of The Plant-Specific Dof Transcription Factor Gene Family, Humera Amin, Shumaila Dastgir, Numan Ali, Muhammad Shafiq, Muhammad Haseeb, Syed Agha Armaghan Asad Abbas Naqvi, Laiba Sharif, Syeda Shehar Bano Rizvi, Sohaib Ahmad, Farooq Ahmad

Journal of Bioresource Management

Dof (DNA binding with one finger) proteins constitute highly ubiquitous transcription factor gene families that are found across all plant species, playing crucial role in fruit ripening, organ development, and other activities. A comprehensive genome-wide analysis of the coffee genome uncovered 49 CaDof genes, which were described in terms of their gene structures, phylogenetic relationships, subcellular localization, gene duplication, and expression in various plant organs. In Coffea arabica, segmental duplication outnumbered tandem duplication. Expressed sequence tags were used to determine the expression of specific organs in CaDof genes. Most genes showed high expression in fruits at various stages, in …