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Full-Text Articles in Biology

Testing Protocols For Surveying Captive Limulus Polyphemus Microbiomes, Fabian Leija, Sean A. Neiswenter Dr. Oct 2019

Testing Protocols For Surveying Captive Limulus Polyphemus Microbiomes, Fabian Leija, Sean A. Neiswenter Dr.

LSAMP Poster Presentations

Limulus polyphemus, the Atlantic horseshoe crab, is a marine arthropod that primarily resides in the shallow intertidal zone of brackish water, water where high salinity seawater meets fresh water. The ecological niche that horseshoe crabs reside in makes them an ideal animal to be placed in an aquarium touch-tank, only needing a shallow pool of water to live comfortably as well as having a tough chitin carapace that won’t be easily damaged by visitors touching them. However, the implications of these human-animal interactions are severely unexplored with limited research being conducted regarding touch-tanks. In contrast, the consequences and hygienic practices …


Development And Characterization Of An Antimicrobial Polydopamine Coating For Conservation Of Humpback Whales., Ariana Tyo, Sonja Welch, Maureen Hennenfent, Pegah Kord Fooroshani, Bruce P Lee, Rupak Rajachar Sep 2019

Development And Characterization Of An Antimicrobial Polydopamine Coating For Conservation Of Humpback Whales., Ariana Tyo, Sonja Welch, Maureen Hennenfent, Pegah Kord Fooroshani, Bruce P Lee, Rupak Rajachar

Michigan Tech Publications

Migration patterns of humpback whales have been monitored using 316L stainless steel (SS) satellite telemetry tags. The potential for tissue infection and necrosis is increased if the bacteria, naturally a part of the diverse microbiome on the skin of humpback whales, can adhere to and colonize the surface of the tags. Polydopamine (pDA) has the potential to prevent the adhesion of one of the most prevalent bacterial strains on the surface of the skin of cetaceans (


Glycolic Acid Utilization In Two Species Of Marine Bacteria, Erik S. Timsak Aug 2019

Glycolic Acid Utilization In Two Species Of Marine Bacteria, Erik S. Timsak

STAR Program Research Presentations

Interactions between bacteria and phytoplankton are crucial for the cycling of organic matter in marine environments. Around 50% of organic carbon taken up by marine bacteria is converted into inorganic carbon. The uptake of organic carbon by marine bacteria exuded from phytoplankton is a key factor in regulating the marine carbon cycle. One such molecule that is exuded by phytoplankton and then uptaken by marine bacteria is called glycolate - the anion of glycolic acid, a two caron molecule. Glycolate is exuded by phytoplankton during photorespiration and 10-50% of dissolved organic carbon in marine environments is comprised of glycolate. Additionally, …


Host Genetics And Geography Influence Microbiome Composition In The Sponge Ircinia Campana, Sarah M. Griffiths, Rachael E. Antwis, Luca Lenzi, Anita Lucaci, Donald C. Behringer, Mark J. Butler, Richard F. Preziosi Jul 2019

Host Genetics And Geography Influence Microbiome Composition In The Sponge Ircinia Campana, Sarah M. Griffiths, Rachael E. Antwis, Luca Lenzi, Anita Lucaci, Donald C. Behringer, Mark J. Butler, Richard F. Preziosi

Biological Sciences Faculty Publications

1. Marine sponges are host to large, diverse communities of microorganisms. These microbiomes are distinct among sponge species and from seawater bacterial communities, indicating a key role of host identity in shaping its resident microbial community. However, the factors governing intraspecific microbiome variability are underexplored, and may shed light on the evolutionary and ecological relationships between host and microbiome.

2. Here, we examined the influence of genetic variation and geographic location on the composition of the Ircinia campana microbiome.

3. We developed new microsatellite markers to genotype I. campana from two locations in the Florida Keys, USA, and characterised their …


Green Infrastructure Design Influences Communities Of Urban Soil Bacteria, Jessica Lee Joyner, Jordan Kerwin, Maha Deeb, George Lozefski, Bharath Prithiviraj, Anna Paitseva, John Mclaughin, Peter M. Groffman, Zhongqi Cheng, Theodore R. Muth May 2019

Green Infrastructure Design Influences Communities Of Urban Soil Bacteria, Jessica Lee Joyner, Jordan Kerwin, Maha Deeb, George Lozefski, Bharath Prithiviraj, Anna Paitseva, John Mclaughin, Peter M. Groffman, Zhongqi Cheng, Theodore R. Muth

Publications and Research

The importance of natural ecosystem processes is often overlooked in urban areas. Green Infrastructure (GI) features have been constructed in urban areas as elements to capture and treat excess urban runoff while providing a range of ancillary benefits, e.g., ecosystem processes mediated by microorganisms that improve air and water quality, in addition to the associations with plant and tree rhizospheres. The objective of this study was to characterize the bacterial community and diversity in engineered soils (Technosols) of five types of GI in New York City; vegetated swales, right of way bioswales (ROWB; including street-side infiltration systems and enhanced tree …


The Effects Of A Bacterial Endotoxin On Behavior And Sensory-Cns-Motor Circuits In Drosophila Melanogaster, Oscar Istas, Abigail Greenhalgh, Robin L. Cooper Apr 2019

The Effects Of A Bacterial Endotoxin On Behavior And Sensory-Cns-Motor Circuits In Drosophila Melanogaster, Oscar Istas, Abigail Greenhalgh, Robin L. Cooper

Biology Faculty Publications

The effect of bacterial sepsis on animal behavior and physiology is complex due to direct and indirect actions. The most common form of bacterial sepsis in humans is from gram-negative bacterial strains. The endotoxin (lipopolysaccharide, LPS) and/or associated peptidoglycans from the bacteria are the key agents to induce an immune response, which then produces a cascade of immunological consequences. However, there are direct actions of LPS and associated peptidoglycans on cells which are commonly overlooked. This study showed behavioral and neural changes in larval Drosophila fed commercially obtained LPS from Serratia marcescens. Locomotor behavior was not altered, but feeding …


Transitions In Microbial Communities Along A 1600 Km Freshwater Trophic Gradient, Mark J. Rozmarynowycz, Benjamin F.N. Beall, George S. Bullerjahn, Gaston E. Small, Robert W. Sterner, Sandra S. Brovold, Nigel A. D'Souza, Susan B. Watson, Robert Michael L. Mckay Apr 2019

Transitions In Microbial Communities Along A 1600 Km Freshwater Trophic Gradient, Mark J. Rozmarynowycz, Benjamin F.N. Beall, George S. Bullerjahn, Gaston E. Small, Robert W. Sterner, Sandra S. Brovold, Nigel A. D'Souza, Susan B. Watson, Robert Michael L. Mckay

Great Lakes Institute for Environmental Research Publications

This study examined vertically-resolved patterns in microbial community structure across a freshwater trophic gradient extending 1600 km from the oligotrophic waters of Lake Superior to the eutrophic waters of Lake Erie, the most anthropogenically influenced of the Laurentian Great Lakes system. Planktonic bacterial communities clustered by Principal Coordinates Analysis (PCoA) on UniFrac distance matrices into four groups representing the epilimnion and hypolimnion of the upper Great Lakes (Lakes Superior and Huron), Lake Superior's northern bays (Nipigon and Black bays), and Lake Erie. The microbes within the upper Great Lakes hypolimnion were the most divergent of these groups with elevated abundance …


Diverse Microbial Communities Hosted By The Model Carnivorous Pitcher Plant Sarracenia Purpurea: Analysis Of Both Bacterial And Eukaryotic Composition Across Distinct Host Plant Populations, Jacob J. Grothjan, Erica B. Young Feb 2019

Diverse Microbial Communities Hosted By The Model Carnivorous Pitcher Plant Sarracenia Purpurea: Analysis Of Both Bacterial And Eukaryotic Composition Across Distinct Host Plant Populations, Jacob J. Grothjan, Erica B. Young

Biological Sciences Faculty Articles

Background. The pitcher plant Sarracenia purpurea supplements nutrient acquisition through carnivory, capturing insect prey which are digested by a food web community of eukaryotes and bacteria. While the food web invertebrates are well studied, and some recent studies have characterized bacteria, detailed genetic analysis of eukaryotic diversity is lacking. This study aimed to compare eukaryotic and bacterial composition and diversity of pitcher communities within and between populations of host plants in nearby but distinct wetland habitats, and to characterize microbial functions across populations and in comparison with another freshwater community.

Methods. Pitcher fluid was sampled from the two …


Phylogenetic, Genomic, And Biogeographic Characterization Of Anovel And Ubiquitous Marine Invertebrate-Associated Rickettsiales Parasite,Candidatus Aquarickettsia Rohweri, Gen. Nov., Sp. Nov, J. Grace Klinges, Stephanie M. Rosales, Ryan Mcminds, Koty H. Sharp Jan 2019

Phylogenetic, Genomic, And Biogeographic Characterization Of Anovel And Ubiquitous Marine Invertebrate-Associated Rickettsiales Parasite,Candidatus Aquarickettsia Rohweri, Gen. Nov., Sp. Nov, J. Grace Klinges, Stephanie M. Rosales, Ryan Mcminds, Koty H. Sharp

Arts & Sciences Faculty Publications

Bacterial symbionts are integral to the health and homeostasis of invertebrate hosts. Notably, members of the Rickettsiales genus Wolbachia influence several aspects of the fitness and evolution of their terrestrial hosts, but few analogous partnerships have been found in marine systems. We report here the genome, phylogenetics, and biogeography of a ubiquitous and novel Rickettsiales species that primarily associates with marine organisms. We previously showed that this bacterium was found in scleractinian corals, responds to nutrient exposure, and is associated with reduced host growth and increased mortality. This bacterium, like other Rickettsiales, has a reduced genome indicative of a parasitic …


Periphytic Algae Decouple Fungal Activity From Leaf Litter Decomposition Via Negative Priming, Halvor M. Halvorson, Jacob R. Barry, Matthew B. Lodato, Robert H. Findlay, Steven N. Francoeur, Kevin A. Kuehn Jan 2019

Periphytic Algae Decouple Fungal Activity From Leaf Litter Decomposition Via Negative Priming, Halvor M. Halvorson, Jacob R. Barry, Matthew B. Lodato, Robert H. Findlay, Steven N. Francoeur, Kevin A. Kuehn

Faculty Publications

1. Well‐documented in terrestrial settings, priming effects describe stimulated heterotrophic microbial activity and decomposition of recalcitrant carbon by additions of labile carbon. In aquatic settings, algae produce labile exudates which may elicit priming during organic matter decomposition, yet the directions and mechanisms of aquatic priming effects remain poorly tested.

2. We tested algal‐induced priming during decomposition of two leaf species of contrasting recalcitrance, Liriodendron tulipifera and Quercus nigra, in experimental streams under light or dark conditions. We measured litter‐associated algal, bacterial, and fungal biomass and activity, stoichiometry, and litter decomposition rates over 43 days.

3. Light increased algal biomass and …