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Articles 1 - 9 of 9

Full-Text Articles in Biology

Kinetics And Relative Importance Of Phosphorolytic And Hydrolytic Cleavage Of Cellodextrins And Cellobiose In Cell Extracts Of Clostridium Thermocellum, Yie.-Heng P. Zhang, Lee R. Lynd Dec 2004

Kinetics And Relative Importance Of Phosphorolytic And Hydrolytic Cleavage Of Cellodextrins And Cellobiose In Cell Extracts Of Clostridium Thermocellum, Yie.-Heng P. Zhang, Lee R. Lynd

Dartmouth Scholarship

Rates of phosphorolytic cleavage of 􏰁-glucan substrates were determined for cell extracts from Clostridium thermocellum ATCC 27405 and were compared to rates of hydrolytic cleavage. Reactions with cellopentaose and cellobiose were evaluated for both cellulose (Avicel)- and cellobiose-grown cultures, with more limited data also obtained for cellotetraose. To measure the reaction rate in the chain-shortening direction at elevated temper- atures, an assay protocol was developed featuring discrete sampling at 60°C followed by subsequent analysis of reaction products (glucose and glucose-1-phosphate) at 35°C. Calculated rates of phosphorolytic cleavage for cell extract from Avicel-grown cells exceeded rates of hydrolytic cleavage by >20-fold …


Genesis: The Evolution Of Biology, Michael Dietrich Sep 2004

Genesis: The Evolution Of Biology, Michael Dietrich

Dartmouth Scholarship

Review of Genesis: The Evolution of Biology by Jan Sapp, 2003.


Pf15p Is The Chlamydomonas Homologue Of The Katanin P80 Subunit And Is Required For Assembly Of Flagellar Central Microtubules, Erin E. Dymek, Paul A. Lefebvre, Elizabeth F. Smith Aug 2004

Pf15p Is The Chlamydomonas Homologue Of The Katanin P80 Subunit And Is Required For Assembly Of Flagellar Central Microtubules, Erin E. Dymek, Paul A. Lefebvre, Elizabeth F. Smith

Dartmouth Scholarship

Numerous studies have indicated that the central apparatus plays a significant role in regulating flagellar motility, yet little is known about how the central pair of microtubules or their associated projections assemble. Several Chlamydomonas mutants are defective in central apparatus assembly. For example, mutant pf15 cells have paralyzed flagella that completely lack the central pair of microtubules. We have cloned the wild-type PF15 gene and confirmed its identity by rescuing the motility and ultrastructural defects in two pf15 alleles, the original pf15a mutant and a mutant generated by insertional mutagenesis. Database searches using the 798-amino-acid polypeptide predicted from the complete …


Estimating Metazoan Divergence Times With A Molecular Clock, Kevin J. Peterson, Jessica B. Lyons, Kristin S. Nowak, Carter M. Takacs, Matthew J. Wargo, Mark A. Mcpeek Apr 2004

Estimating Metazoan Divergence Times With A Molecular Clock, Kevin J. Peterson, Jessica B. Lyons, Kristin S. Nowak, Carter M. Takacs, Matthew J. Wargo, Mark A. Mcpeek

Dartmouth Scholarship

Accurately dating when the first bilaterally symmetrical animals arose is crucial to our understanding of early animal evolution. The earliest unequivocally bilaterian fossils are 555 million years old. In contrast, molecular-clock analyses calibrated by using the fossil record of vertebrates estimate that vertebrates split from dipterans (Drosophila) 900 million years ago (Ma). Nonetheless, comparative genomic analyses suggest that a significant rate difference exists between vertebrates and dipterans, because the percentage difference between the genomes of mosquito and fly is greater than between fish and mouse, even though the vertebrate divergence is almost twice that of the dipteran. Here we show …


The Cohesion Protein Ord Is Required For Homologue Bias During Meiotic Recombination, Hayley A. Webber, Louisa Howard, Sharon E. Bickel Mar 2004

The Cohesion Protein Ord Is Required For Homologue Bias During Meiotic Recombination, Hayley A. Webber, Louisa Howard, Sharon E. Bickel

Dartmouth Scholarship

During meiosis, sister chromatid cohesion is required for normal levels of homologous recombination, although how cohesion regulates exchange is not understood. Null mutations in orientation disruptor (ord) ablate arm and centromeric cohesion during Drosophila meiosis and severely reduce homologous crossovers in mutant oocytes. We show that ORD protein localizes along oocyte chromosomes during the stages in which recombination occurs. Although synaptonemal complex (SC) components initially associate with synapsed homologues in ord mutants, their localization is severely disrupted during pachytene progression, and normal tripartite SC is not visible by electron microscopy. In ord germaria, meiotic double strand breaks appear …


A Dominant-Negative Fur Mutation In Bradyrhizobium Japonicum, Heather P. Benson, Kristin Levier, Mary Lou Guerinot Mar 2004

A Dominant-Negative Fur Mutation In Bradyrhizobium Japonicum, Heather P. Benson, Kristin Levier, Mary Lou Guerinot

Dartmouth Scholarship

In many bacteria, the ferric uptake regulator (Fur) protein plays a central role in the regulation of iron uptake genes. Because iron figures prominently in the agriculturally important symbiosis between soybean and its nitrogen-fixing endosymbiont Bradyrhizobium japonicum, we wanted to assess the role of Fur in the interaction. We identified a fur mutant by selecting for manganese resistance. Manganese interacts with the Fur protein and represses iron uptake genes. In the presence of high levels of manganese, bacteria with a wild-type copy of the furgene repress iron uptake systems and starve for iron, whereas fur mutants fail to …


Shaping Science With Rhetoric: The Cases Of Dobzhansky, Schrdinger, And Wilson, Michael Dietrich Jan 2004

Shaping Science With Rhetoric: The Cases Of Dobzhansky, Schrdinger, And Wilson, Michael Dietrich

Dartmouth Scholarship

A review of Shaping Science with Rhetoric: The Cases of Dobzhansky, Schrödinger, and Wilson by Leah Ceccarelli.


Mendel's Legacy: The Origin Of Classical Genetics, Michael Dietrich Jan 2004

Mendel's Legacy: The Origin Of Classical Genetics, Michael Dietrich

Dartmouth Scholarship

Review of Mendel's Legacy: The Origin of Classical Genetics by Elof Axel Carlson, 2004


Stage-Specific And Interactive Effects Of Sedimentation And Trout On A Headwater Stream Salamander, Winsor H. Lowe, Keith H. Nislow, Douglas T. Bolger Jan 2004

Stage-Specific And Interactive Effects Of Sedimentation And Trout On A Headwater Stream Salamander, Winsor H. Lowe, Keith H. Nislow, Douglas T. Bolger

Dartmouth Scholarship

In species with complex life cycles, stage-specific effects of environmental conditions combine with factors regulating stage-specific recruitment to determine population-level response to habitat disturbance. The abundance of the stream salamander Gyrinophilus porphyriticus(Plethodontidae) is negatively related to both logging-associated sedimentation and brook trout (Salvelinus fontinalis) in headwater streams throughout New Hampshire, USA. To understand the mechanisms underlying these patterns, we investigated stage-specific and interactive effects of sedimentation and brook trout on G. porphyriticus. We conducted quantitative surveys of salamanders, brook trout, and substrate embeddedness in 15 first-order streams and used a controlled experiment to test the direct and interactive effects of …