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Full-Text Articles in Biology

Understanding, Quantifying, And Reducing Bias In Fisheries-Independent Visual Surveys, James Kilfoil Feb 2020

Understanding, Quantifying, And Reducing Bias In Fisheries-Independent Visual Surveys, James Kilfoil

FIU Electronic Theses and Dissertations

Understanding spatiotemporal changes in populations is vital for conservation managers to assess current recovery efforts, determine future conservation priorities, and forms the basis to explore complex ecological questions. In fisheries, these data have traditionally been collected using fisheries-independent surveys that rely on extractive sampling practices (e.g., longlines, gillnets, trawls). However, with the growing availability of low-cost, high-definition cameras, researchers are increasingly using visual surveys as a non-invasive alternative. Camera surveys have a number of advantages including their archivable data, and offer insights into species habitat use and behavior. However, the use of cameras has a number of inherent biases. Understanding, …


Mechanisms For The Persistence Of The Coral Holobiont In The Warming Oceans Of The Anthropocene, Daniel G. Merselis Jul 2019

Mechanisms For The Persistence Of The Coral Holobiont In The Warming Oceans Of The Anthropocene, Daniel G. Merselis

FIU Electronic Theses and Dissertations

Coral Reefs are rapidly deteriorating in response to an onslaught of human-mediated stressors. Just one stressor alone, climate change, may extirpate coral reef ecosystems within a human lifetime, threatening societal and ecological catastrophe. Reef-derived ecosystem services are crucial for sustenance, coastal protection, and economic prosperity in over 100 countries. Near-term human decisions will determine whether reef-corals, the ecosystems they engineer, the 25% of marine biodiversity they support, and the human communities that depend upon them can be protected. My dissertation aims to characterize the potential for corals' adaptive mechanisms to facilitate their continued survival- information which will only represent hope …


Spatial And Temporal Patterns Of Arctic Nearshore Fish Community And Food Web Structures, Mark B. Barton Jun 2018

Spatial And Temporal Patterns Of Arctic Nearshore Fish Community And Food Web Structures, Mark B. Barton

FIU Electronic Theses and Dissertations

Climate change and increasing anthropogenic activities are causing rapid changes to environmental and ecological processes in the Arctic Ocean. To better understand these changes, scientists have increased research efforts in these regions, but to date the number of studies on Arctic nearshore habitats are lacking. My dissertation responds to the paucity of information and investigates patterns in Arctic nearshore fish communities and food webs to gain insight to how these ecosystems may shift as these changes continue. I used multivariate statistical analysis to examine patterns in community structure and composition to determine that Arctic nearshore fish communities are largely driven …


Phenomenological And Molecular Basis Of The Cnidarian Immune System, Tanya Brown Jun 2017

Phenomenological And Molecular Basis Of The Cnidarian Immune System, Tanya Brown

FIU Electronic Theses and Dissertations

Coral reefs are one of the most diverse ecosystems on the planet due partially to the habitat structure provided by corals. Corals are long lived organisms that can live for hundreds of years and as a result growth of many species is very slow. As a result of this, recovery of corals from disease outbreaks is very slow and difficult and therefore the ecosystem is deteriorating rapidly. Due to this increase in disease and its detrimental effect on coral reefs, it has become imperative to study how corals respond to disease outbreaks. The response of the coral to pathogens is …


Examining Movement And Habitat Selection Of Everglades Fishes In Response To Seasonal Water Levels, Gregory J. Hill Mar 2017

Examining Movement And Habitat Selection Of Everglades Fishes In Response To Seasonal Water Levels, Gregory J. Hill

FIU Electronic Theses and Dissertations

Fish distribution patterns and seasonal habitat use play a key role in the food web dynamics of aquatic ecosystems, including the Florida Everglades. In this study I examined the fine scale habitat shifts and movements of spotted sunfish, Lepomis punctatus across varying seasons and hydrologic conditions using in-situ field enclosures and Passive Integrated Transponder (PIT) systems. Data on fish use of three dominant Everglades marsh habitats and activity level were recorded continuously from January to August, 2015. Fish were more active and had the highest use of higher elevation habitats when water levels rose during an experimental reversal in mid-April. …


Investigating Sub-Tropical Community Resistance And Resilience To Climate Disturbance, Ross E. Boucek Aug 2016

Investigating Sub-Tropical Community Resistance And Resilience To Climate Disturbance, Ross E. Boucek

FIU Electronic Theses and Dissertations

Changes in global climate will likely increase climate variability. In turn, changes in climate variability have begun to alter the frequency, intensity, and timing of climate disturbances. Continued changes in the climate disturbance regime experienced by natural systems will undoubtedly affect ecological processes at every hierarchical scale. Thus, in order to predict the dynamics of ecological systems in the future, we must develop a more mechanistic understanding of how and in what ways climate disturbance affects natural systems. In South Florida, two climate disturbances recently affected the region, a severe cold spell in 2010, and a drought in 2011. Importantly, …


Environmental Influences On Bacterio-Phytoplanktonic Coupling And Bacterial Growth Efficiency In A Sub-Tropical Estuary, Rachel Kotkowski Apr 2014

Environmental Influences On Bacterio-Phytoplanktonic Coupling And Bacterial Growth Efficiency In A Sub-Tropical Estuary, Rachel Kotkowski

FIU Electronic Theses and Dissertations

Bacterio-phytoplanktonic coupling and bacterial growth efficiency (BGE) measurements were used to analyze microbial trophic dynamics and the influence of environmental factors in Florida Bay, Florida. Phytoplankton gross primary productivity (GPP) was measured using 24-hour in situ oxygen incubations; bacterial productivity (BP) was measured using 3H- thymidine incorporation. Weak bacterio-phytoplanktonic coupling was observed over the sampling period. BP was more influenced by local total nitrogen concentrations while GPP was more evenly distributed. BGE rates were low but consistent with marine and estuarine ecosystems worldwide. Results suggest that bacterioplankton growth in Florida Bay is relatively uncoupled from phytoplankton production, which may …


Effects Of Multiple Ecological Drivers On Recruitment And Succession Of Coral Reef Macroalgal Communities, Alain Duran Jun 2013

Effects Of Multiple Ecological Drivers On Recruitment And Succession Of Coral Reef Macroalgal Communities, Alain Duran

FIU Electronic Theses and Dissertations

The study evaluated the effects of herbivory pressure, nutrient availability and potential propagule supply on recruitment and succession of coral reef macroalgal communities. Recruitment and succession tiles were placed in a nutrient-herbivory factorial experiment and macroalgal abundances were evaluated through time. Proportional abundances of macroalgal form-functional groups on recruitment and succession tiles were similar to field established communities within treatments, evidencing possible effects of adult macroalgae as propagule supply. Macroalgal abundance of recruitment tiles increased with nutrient loading and herbivory reduction combined whereas on succession tiles nutrient loading increased abundance of articulated-calcareous only when herbivores were excluded. Macroalgal field established …


The Interactive Effects Of Predators, Resources, And Disturbance On Freshwater Snail Populations From The Everglades, Clifton B. Ruehl Apr 2010

The Interactive Effects Of Predators, Resources, And Disturbance On Freshwater Snail Populations From The Everglades, Clifton B. Ruehl

FIU Electronic Theses and Dissertations

The origins of population dynamics depend on interplay between abiotic and biotic factors; the relative importance of each changing across space and time. Predation is a central feature of ecological communities that removes individuals (consumption) and alters prey traits (non-consumptive). Resource quality mitigates non-consumptive predator effects by stimulating growth and reproduction. Disturbance resets predator-prey interactions by removing both. I integrate experiments, time-series analysis, and performance trials to examine the relative importance of these on the population dynamics of a snail species by studying a variety of their traits. A review of ninety-three published articles revealed that snail abundance was much …