Biology Commons^™

Pelagic Tunicate Grazing On Marine Microbes Revealed By Integrative Approaches, Kelly R. Sutherland, Anne W. Thompson

Biology Faculty Publications and Presentations

Marine microorganisms comprise a large fraction of ocean carbon and are central players in global biogeochemical cycling. Significant gaps remain, however, in our understanding of processes that determine the fate, distribution, and community structure of microbial communities. Protists and viruses are accepted as being part of the microbial loop and a source of microbial mortality. However, pelagic tunicates (salps, doliolods, pyrosomes, and appendicularians), which are abundant in oceanic and coastal environments and consume microorganisms with higher individual grazing rates than other common grazers, remain underappreciated in their role controlling microbial communities, distributions, and flux through ecosystems. In spite of sampling …

Use Of The Sea Hare (Aplysia Fasciata) In Marine Pollution Biomonitoring Of Harbors And Bays, Frank J. Dirrigl, Zachariah Badaoui, Carlos Tamez, Christopher Vitek, Jason Parsons

Biology Faculty Publications and Presentations

Our study evaluated heavy metal concentrations in soft tissues of sea hare, Aplysia fasciata, from the Lower Laguna Madre, Texas. Heavy metals in tissues followed Se > As > Pb > Cd. Concentrations ranged As (BDL-28.08), Cd (BDL-5.50), Pb (BDL-12.85) and Se (4.25-93.43 ppm). Median As, Cd, Pb, and Se tissue levels exceeded exposure levels. Significant relationships occurred in metal-metal (As-Cd, As-Pb, Cd-Pb, Cd-Se, and Pb-Se), metal-tissue (significant Se uptake by inhalant and exhalant siphons and As in the hepatopancreas), and metal-metal within tissue (As-Pb in the hepatopancreas and Cd-Pb in the digestive cecum) analyses (p

Dynamics Of Prochlorococcus And Synechococcus At Station Aloha Revealed Through Flow Cytometry And High-Resolution Vertical Sampling, Ger J. Van Den Engh, Joseph K. Doggett, Anne W. Thompson, Martina A. Doblin, Carla N.G. Gimpel, David M. Karl

Biology Faculty Publications and Presentations

The fluorescence and scattering properties of Prochlorococcus and Synechococcus at Station ALOHA as measured by flow cytometry (termed the FCM phenotype) vary with depth and over a variety of time scales. The variation in FCM phenotypes may reflect population selection or physiological acclimation to local conditions. Observations before, during, and after a storm with deep water mixing show a short-term homogenization of the FCM phenotypes with depth, followed by a return to the stable pattern over the time span of a few days. These dynamics indicate that, within the upper mixed-layer, the FCM phenotype distribution represents acclimation to ambient light. …

The Phenology Of Sand Crabs, Lepidopa Benedicti (Decapoda: Albuneidae), Zen Faulkes

Biology Faculty Publications and Presentations

Albuneid sand crabs are widespread on sandy beaches around the world, but because they conceal themselves by digging in sand and are often found at low densities, little is known about their basic biology. Lepidopa species were collected from the beaches of South Padre Island, Texas, on the western coast of Gulf of Mexico, a location that had previously been suggested to act as a population sink. The site contained Lepidopa benedicti and L. websteri, although the latter was extremely rare (collected three times in 5 years). There was significant variation in abundance across the year, with higher densities …

Assessing Infection Patterns In Chinese Mystery Snails From Wisconsin, Usa Using Field And Laboratory Approaches, Brittany Harried, Kyle Fischer, Kathryn E. Perez, Gregory J. Sandland

Biology Faculty Publications and Presentations

The success of invasive species establishment in new habitats depends, in part, on interactions with other members of the invaded community. Cipangopaludina chinensis, the Chinese mystery snail (CMS), is an exotic, invasive snail in North America. Since its introduction in the 1890s, CMS have spread to a number of watersheds across the United States and parts of Canada. This invasion has generated questions about the snail’s capacity to serve as a host for parasites within local habitats, including parasites with conservation implications. To begin addressing these questions, we necropsied 147 wild-caught snails from 22 lakes across Wisconsin, finding only two …

Insights Into Archaeal Evolution And Symbiosis From The Genomes Of A Nanoarchaeon And Its Inferred Crenarchaeal Host From Obsidian Pool, Yellowstone National Park, Mircea Podar, Kira S. Makarova, David E. Graham, Yuri L. Wolf, Eugene V. Koonin, Anna-Louise Reysenbach

Biology Faculty Publications and Presentations

Background: A single cultured marine organism, Nanoarchaeum equitans, represents the Nanoarchaeota branch of symbiotic Archaea, with a highly reduced genome and unusual features such as multiple split genes.

Results: The first terrestrial hyperthermophilic member of the Nanoarchaeota was collected from Obsidian Pool, a thermal feature in Yellowstone National Park, separated by single cell isolation, and sequenced together with its putative host, a Sulfolobales archaeon. Both the new Nanoarchaeota (Nst1) and N. equitans lack most biosynthetic capabilities, and phylogenetic analysis of ribosomal RNA and protein sequences indicates that the two form a deepbranching archaeal lineage. However, the Nst1 …

Cephalopod Genomics: A Plan Of Strategies And Organization, Caroline B. Albertin, Laure Bonnaud, C. Titus Brown, Wendy J. Crookes-Goodson, Rute R. Da Fonseca, Carlo Di Cristo, Brian P. Dilkes, Eric Edsinger-Gonzales, Robert M. Freeman Jr., Roger T. Hanlon, Kristen M. Koenig, Annie R. Lindgren, Mark Q. Martindale, Patrick Minx, Leonid L. Moroz, Marie-Therese Nödl, Spencer V. Nyholm, Atsushi Ogura, Judit R. Pungor, Joshua J. C. Rosenthal, Erich M. Schwarz, Shuichi Shigeno, Jan M. Strugnell, Tim Wollesen, Guojie Zhang, Clifton W. Ragsdale

Biology Faculty Publications and Presentations

The Cephalopod Sequencing Consortium (CephSeq Consortium) was established at a NESCent Catalysis Group Meeting, “Paths to Cephalopod Genomics- Strategies, Choices, Organization,” held in Durham, North Carolina, USA on May 24-27, 2012. Twenty-eight participants representing nine countries (Austria, Australia, China, Denmark, France, Italy, Japan, Spain and the USA) met to address the pressing need for genome sequencing of cephalopod mollusks. This group, drawn from cephalopod biologists, neuroscientists, developmental and evolutionary biologists, materials scientists, bioinformaticians and researchers active in sequencing, assembling and annotating genomes, agreed on a set of cephalopod species of particular importance for initial sequencing and developed strategies and an …

A Multi-Gene Phylogeny Of Cephalopoda Supports Convergent Morphological Evolution In Association With Multiple Habitat Shifts In The Marine Environment, Annie R. Lindgren, Molly S. Pankey, Frederick G. Hochberg, Todd H. Oakley

Biology Faculty Publications and Presentations

The marine environment is comprised of numerous divergent organisms living under similar selective pressures, often resulting in the evolution of convergent structures such as the fusiform body shape of pelagic squids, fishes, and some marine mammals. However, little is known about the frequency of, and circumstances leading to, convergent evolution in the open ocean. Here, we present a comparative study of the molluscan class Cephalopoda, a marine group known to occupy habitats from the intertidal to the deep sea. Several lineages bear features that may coincide with a benthic or pelagic existence, making this a valuable group for testing hypotheses …

Factors Controlling Seagrass Revegetation Onto Dredged Material Deposits: A Case Study In Lower Laguna Madre, Texas, James E. Kaldy, Kenneth H. Dunton, Joseph L. Kowalski, Kun-Seop Lee

Biology Faculty Publications and Presentations

Our objective was to evaluate the influence of water quality and sediment chemistry on the survival and growth of Halodule wrightii transplanted onto unconsolidated dredged materials in Lower Laguna Madre, TX. Subsequent to transplanting activities, we measured environmental conditions and seagrass parameters at transplant and natural beds over a 1-yr period. Although water quality characteristics at the transplant and comparison sites were compatible with seagrass growth, transplants failed to survive for more than a few months. Seagrasses at natural sites received high light (>6000 mols m−2 y−1) and exhibited typical patterns of annual growth, biomass and density as well …

Range Extensions Of The Seaweeds Codium Taylorii And Caulerpa Prolifera Into The Lower Laguna Madre, Texas, Hudson R. Deyoe, Donald L. Hockaday

Biology Faculty Publications and Presentations

Between January 1999 and April 2000 two chlorophyte algae, Codium taylorii Silva and Caulerpa prolifera F. obovata (Forsskal) Lamouroux were found in the lower Laguna Madre (LLM). Both are coenocytic algae and are members of the chlorophyte class Bryopsidophyceae ( van den Hoek et al. 1995). The species descriptions in Taylor (1960) were used in the identification of the specimens. Her barium specimens have been deposited at the University of Texas- Pan American Coastal Studies Laboratory (accession numbers COlO - C. prolifera, COl 1 - C. taylorii) , University of California at Berkeley (UC 1753606 - C. taylorii) , University …