Animal Sciences Commons^™

Characterization Of Atlantic Cod Spawning Habitat And Behavior In Icelandic Coastal Waters, Timothy B. Grabowski, Kevin M. Boswell, Bruce J. Mcadam, R.J. David Wells, Guđrún Marteinsdóttir

Department of Biological Sciences

The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15–16 April 2009). We simultaneously operated two different active hydroacoustic gear types, a split beam echosounder and a dual frequency imaging sonar (DIDSON), as well as a remotely operated underwater vehicle (ROV). A total of five fish species were …

The Lobster Bulletin, Fall 2012, Lobster Institute, University Of Maine

Lobster Bulletin

The Lobster Bulletin newsletter includes research updates, and information on lobsters and the lobster industry. The Lobster Institute at the University of Maine is dedicated to protecting and conserving the lobster resource, and enhancing lobstering as an industry and a way of life.

Headlines in the Fall 2012 issue include:

• Group Seeks to Protect Ocean by Promoting Better Lawn Care Practices
• Lobster Institute 25th Anniversary Celebration Continues
• Maine Conforms First-Ever Case of West Nile Virus
• Research Report: Direct Determination of Age in Lobsters
• Research Report: Lobster Cam Back Online Soon
• Lobster Council Taking Giant Step Forward

Simulated Performance Of Catch Curve Methods For Estimating Total Mortality Rate, Matthew W. Smith, John M. Hoenig

Reports

This document has been issued as VIMS Data Report 60 and provides additional simulation results for Smith et al. (2012) published in the North American Journal of Fisheries Management. Catch curve methods are a basic tool of population dynamics for estimating total mortality rate from age composition. There are a number of methodological issues which remain unresolved. Smith et al. (2012) attempts to provide guidelines on the use of these methods based on extensive Monte Carlo simulations. This report presents additional simulation results to supplement the results in the journal article. The estimators, evaluation criteria, simulation procedures, and conditions simulated …

Nutritional Content Of Rhinoceros Auklet (Cerorhinca Monocerata) Bill Loads, Dustin Taylor, Ron Heintz

STAR Program Research Presentations

Nutritional Content of Rhinoceros Auklet Bill Loads

Dustin E Taylor

Abstract

An adult Rhinoceros Auklet (Cerorhinca monocerata) can only catch and carry a limited amount of prey to their nestlings after a foraging trip. The auklets therefore must maximize their efficiency by bringing back the most proportionally nutritious prey items to their nestlings. The prey carried back to the nesting sites (known as a ‘bill load’) can contain whole fish, as well as parts, most commonly fish heads. This study is aimed to determine whether returning with just heads to the nestlings was proportionally more nutritious than bringing …

A Genetic Survey Of English Sole Populations In The Salish Sea, Elizabeth S. Gutierrez, Gary A. Winans, Jon Baker, Amanda Cope

STAR Program Research Presentations

This summer I interned at the Northwest Fisheries Science Center in Seattle, WA and participated in NOAA’s Salish Sea Project. The Salish Sea Project’s goal is to identify genetically distinctive groups of species in the Salish Sea that may have unique evolutionary and/or adaptive backgrounds. These findings will allow NOAA to promote and monitor the natural production of species in the Salish Sea, to select representative populations for experimental work regarding pollution, ocean acidification and climate change, to contribute to managing the ecosystem for intra- and inter-species diversity, and to help make informed decisions about adaptive management and marine protected …

Developing Monitoring Methods For Leptasterias Spp. As Sentinel Species In Detecting Local Environmental Changes, Zachary Sturbaum, Kathryn Nuessly, Riley J. Smith, C. Sarah Cohen

STAR Program Research Presentations

Leptasterias spp., a six-rayed sea star, is found in rocky intertidal habitats ranging from Alaska to central California. Leptasterias spp. can be monitored on a broad scale throughout their range by a variety of means using timed counts and random plot censusing in order to detect both large-scale and local-level changes in the environment due to climate change, land-based human activity, or other environmental events. Leptasterias brood their young externally until the embryos grow into fully developed juveniles. These juveniles disperse by crawling away, limiting their dispersal potential. This localized dispersal provides an opportunity to use Leptasterias spp …

Effects Of Pristane On Growth Of Pink Salmon (Oncorhynchus Gorbuscha), Brielle D. Kemis, Bonita Nelson

STAR Program Research Presentations

Pristane is a naturally occurring hydrocarbon that is generated by copepods in marine ecosystems. Organisms that eat copepods do not readily metabolize pristane, which causes it to accumulate throughout the marine food web. Understanding how pristane affects marine fish is essential because pristane is often used as a bioindicator in lab studies and may be influencing results in those studies. Also, this hydrocarbon may significantly reduce growth of marine fish in the wild. A previous study indicated that pristane is an appetite suppressant and growth retardant in fish. However, the study implemented a feeding regime with unnaturally high levels of …

The Lobster Bulletin, Summer 2012, Lobster Institute, University Of Maine

Lobster Bulletin

The Lobster Bulletin newsletter includes research updates, and information on lobsters and the lobster industry. The Lobster Institute at the University of Maine is dedicated to protecting and conserving the lobster resource, and enhancing lobstering as an industry and a way of life.

Headlines in the Summer 2012 issue include:

• Understanding the Soft Shell Lobster
• Lobster Institute to Host UMaine Lobster Showcase to Celebrate Its 25th Anniversary
• New Lobster Mandatory V-Notch Rules In New York Marine Waters
• Research Report: Effects of Acidification on Juvenile Lobsters Being Studied at UMaine
• Research Report: Fact Sheet Released on Status of Eutrophication in the …

Circle Hooks In Commercial, Recreational, And Artisanal Fisheries: Research Status And Needs For Improved Conservation And Management, Je Serafy, Sj Cooke, Ga Diaz, John Graves, Et Al

VIMS Articles

The intent of convening the International Symposium on Circle Hooks in Research, Management, and Conservation was to yield a contemporary, science-based assessment of the management and conservation utility of circle hooks in commercial, recreational, and artisanal fisheries around the globe. The symposium objective was to provide a forum for individuals, organizations, and agencies to share relevant research results and perspectives. Based on the presentations, an examination of the literature, and the collective experience and knowledge of the authors, we provide a brief overview of the current status of circle hook research along with a list of research needs, with a …

Incorporating Circle Hooks Into Atlantic Pelagic Fisheries: Case Studies From The Commercial Tuna/Swordfish Longline And Recreational Billfish Fisheries, John Graves, Az Horodysky, Dw Kerstetter

VIMS Articles

An emerging body of literature has demonstrated the benefits of the use of circle hooks relative to standard J-hooks in commercial and recreational fisheries. In the pelagic longline fishery for tunas (Thunnus spp.) and swordfish (Xiphias gladius Linnaeus, 1758), the use of circle hooks has resulted in greater catch rates of some target species, lower catch rates of some bycatch species, and a higher percentage of many target and bycatch species alive at the time of haulback (gear retrieval). However, a lack of agreement among results of studies conducted in different fisheries and areas, using different baits and rigging techniques, …

Big Blue And You: An Interdisciplinary Look At Science And The Ocean, A Students Teaching Students Course, Megan M. Nepshinsky, Alexa Kretsch, Benjamin Negrete

Senior Honors Projects

This class is the second project under the new Honors Program initiative, Students Teaching Students (STS). STS was brought to URI and implemented by Bridget Griffith as part of her Senior Honors Project in 2011. Students apply in their Junior year to design, research, and teach an honors course on a topic about which they are passionate. The STS program allows motivated honors students to have a unique opportunity to lead a class as student professors. This allows students a freedom of creativity on the topic, assignments, and teaching style. Drawing on our own experiences, we were able to create …

Comparison Of Creel Survey Data To Traditional Sampling Techniques In Pit-Lake Fisheries Of Muhlenberg County, Kentucky, Derek L. Rupert

Masters Theses & Specialist Projects

Populations of largemouth bass, Micropterus salmoides, and bluegill, Lepomis macrochirus, were evaluated from five pit-lakes in Muhlenberg County, Kentucky, to determine if accurate proportional stock density (PSD) data can be obtained from a mandatory creel survey. It was hypothesized that the proportion of stock-to-quality (300-400mm) and quality (+400mm) largemouth bass from four years (2007-2010) of creel survey data would be statistically similar to those generated through on-site sampling in 2011. Fish were collected via a combination of gill netting, seining, hook-and-line fishing, and boat-mounted electro-fishing. In two of the pit-lakes, the sampling-generated length frequency data was not significantly …

Virginia Game Fish Tagging Program Annual Report 2011, Susanna Musick, Lewis Gillingham

Reports

Through 2011, the Virginia Game Fish Tagging Program has maintained a 17-year database of records for tagged and recaptured fish. The program is a co-operative project of the Virginia Saltwater Fishing Tournament (under the Virginia Marine Resources Commission-VMRC) and the Virginia Institute of Marine Science (VIMS) of the College of William and Mary (under the VIMS Marine Advisory Program).

The Lobster Bulletin, Spring 2012, Lobster Institute, University Of Maine

Lobster Bulletin

The Lobster Bulletin newsletter includes research updates, and information on lobsters and the lobster industry. The Lobster Institute at the University of Maine is dedicated to protecting and conserving the lobster resource, and enhancing lobstering as an industry and a way of life.

Headlines in the Spring 2012 issue include:

• Lobster Institute’s 2012 Canadian/U.S. Lobstermen’s Town Meeting Attracts over 100
• Darden Restaurants to Establish a “Lobster Farm” in Malaysia
• National Seafood Marketing Coalition Addresses U.S. Senate
• Lobster Science Symposium Planned for November
• Research Report: Warm Water Affecting Lobsters
• Research Report: Steneck participates in Task Force on Global Fishing
• Lobster Institute’s …

Evaluation Of Striped Bass Stocks In Virginia, Monitoring And Tagging Studies, 2010-2014 : Progress Report, 1 September 2010 - 31 August 2011, Philip W. Sadler, Matthew W. Smith, John M. Hoenig, Robert E. Harris, Lydia M. Goins

Reports

This report presents the results of striped bass (Morone saxatilis) tagging and monitoring activities in Virginia during the period 1 September 2010 through 31 August 2011. It includes an assessment of the biological characteristics of striped bass taken from the 2011 spring spawning run, estimates of annual survival and fishing mortality based on annual spring tagging, and the results of the study that documents the prevalence of mycobacterial infections of striped bass in Chesapeake Bay. The information contained in this report is required by the Atlantic States Marine Fisheries Commission and is used to implement a coordinated management plan for …

Population Dynamics, Chick Diet, And Foraging Behavior Of The Razorbill (Alca Torda) At Matinicus Rock, Maine, Katherine E. Kauffman

Masters Theses 1911 - February 2014

During the summers of 2007-2009, I studied the population growth and reproductive and foraging ecology of the Razorbill (Alca torda) at Matinicus Rock (MR), Maine. This medium-sized marine bird in the family Alcidae (auks) was extirpated from the Gulf of Maine in the late 19^th century by hunting, collecting, and colony disturbance. Following legislation protecting seabirds and their nesting habitats, the Razorbill has recolonized probable former nesting habitat in the Gulf of Maine during the past several decades. Six small colonies comprise the Maine population, which is listed as threatened and forms the southern extension of the …

The Rise And Fall Of Crassostrea Virginica Oyster Reefs: The Role Of Disease And Fishing In Their Demise And A Vignette On Their Management, Eric N. Powell, John M. Klinck, Kathryn Ashton-Alcox, Eileen E. Hofmann, Jason Morson

CCPO Publications

We describe a model designed to simulate the shell carbonate budget of an oyster reef.We identify five parameters descriptive of basic characteristics of the shell carbonate budget of a reef that limit simulation accuracy. Two describe the TAZ (taphonomically-active zone) and the distribution of shell carbonate within it. One is the taphonomic rate in the TAZ. Two determine the volume contribution of shell carbonate and the taphonomic loss rate within the reef framework. For Mid-Atlantic estuaries, model simulations suggest that reef accretion only occurs if oyster abundance is near carrying capacity. Simulations further suggest that reef accretion is infeasible for …

Does Large-Scale Ocean Circulation Structure Life History Connectivity In Antarctic Toothfish (Dissostichus Mawsoni)?, Julian Ashford, Michael S. Dinniman, Cassandra Brooks, Allen H. Andrews, Eileen E. Hofmann, Gregor Cailliet, Christopher Jones, Nakul Ramanna

CCPO Publications

A multidisciplinary approach incorporating otolith chemistry, age data, and numerical Lagrangian particle simulations indicated a single, self-recruiting population of Antarctic toothfish (Dissostichus mawsoni) in the Southeast Pacific Basin (SPB) and Ross Sea, with a life history structured by the large-scale circulation. Chemistry deposited prior to capture along otolith edges demonstrated strong environmental heterogeneity, yet the chemistry in otolith nuclei, deposited during early life, showed no differences. Age data showed only adult fish in catches on the Pacific-Antarctic Ridge in the SPB and structuring of life stages consistent with transport pathways from the northern Ross Sea. Lagrangian particle simulations …

Out Of Sight, But Not Out Of Mind: A Look At Nanoparticles In The Marine Environment, Evan Ward, John J. Doyle

Wrack Lines

Nanoparticles exist in many products used by humans, such as sunscreens. medications, cosmetics, paints and electronics. But what is the effect of these tiny particles on the ocean or estuarine environment when the sunscreen washes off? This article looks at that question and at shellfish in particular. Evan Ward and John Doyle are marine scientists at UConn.

Who's Afraid Of The Big Bad Cormorant?, Richard Jay King

Wrack Lines

How much do you really know about the cormorant? It's an amazing coastal bird, though not a very pretty one. Lately it has a bad rap as a destroyer of island ecosystems. This article talks about these avian creatures and their habits.

Barnacle Bonding: Morphology Of Attachment Of Xenobalanus Globicipitis To Its Host Tursiops Truncatus, Mark C. Pugliese, Stefanie Anne Boettger, Frank E. Fish

Biology Faculty Publications

No abstract provided.

Deep-Sea Origin And In-Situ Diversification Of Chrysogorgiid Octocorals, Catherine S. Mcfadden, Eric Pante, Scott C. France, Arnaud Couloux, Corinne Cruaud, Sarah Samadi, Les Watling

All HMC Faculty Publications and Research

The diversity, ubiquity and prevalence in deep waters of the octocoral family Chrysogorgiidae Verrill, 1883 make it noteworthy as a model system to study radiation and diversification in the deep sea. Here we provide the first comprehensive phylogenetic analysis of the Chrysogorgiidae, and compare phylogeny and depth distribution. Phylogenetic relationships among 10 of 14 currently-described Chrysogorgiidae genera were inferred based on mitochondrial (mtMutS, cox1) and nuclear (18S) markers. Bathymetric distribution was estimated from multiple sources, including museum records, a literature review, and our own sampling records (985 stations, 2345 specimens). Genetic analyses suggest that the Chrysogorgiidae as currently described is …

Biology Department Newsletter, No.2, Sacred Heart University

Biology Newsletter

No abstract provided.

Seasonal Distributions And Movements Of Longnose Gar (Lepisosteus Osseus) Within The York River System, Virginia, Patrick E. Mcgrath, Eric J. Hilton, John A. Musick

VIMS Articles

The seasonal movements of Lepisosteus osseus (Longnose Gar) are largely unknown. The goal of this project was to characterize spawning movements and seasonal distributions by using acoustic tagging methods and examining historical catch records from a trawl survey. This is the first time that movements have been studied for an estuarine population of Longnose Gar. Two individuals moved greater minimum distances (69 and 74 km) than found in the only other report on movement in this species. Spawning-ground residency time, collected from two tagged Longnose Gar, was approximately one month, and tidal periodicity was observed for one of the two …

Age Composition And Distribution Of Red Drum (Sciaenops Ocellatus) In Offshore Waters Of The North Central Gulf Of Mexico: An Evaluation Of A Stock Under A Federal Harvest Moratorium, Sean P. Powers, Crystal Hightower, J. Marcus Drymon, Matthew W. Johnson

University Faculty and Staff Publications

Because of a lack of fishery- dependent data, assessment of the recovery of fish stocks that undergo the most aggressive form of management, namely harvest moratoriums, remains a challenge. Large schools of red drum (Sclaenops ocellatus) were common along the northern Gulf of Mexico until the late 1980s when increased fishing effort quickly depleted the stock. After 24 years of harvest moratorium on red drum in federal waters, the stock is in need of reassessment; however, fishery dependent data are not available in federal waters and fishery-independent data are limited. We document the distribution, age composition, growth, and condition of …

Estimation Of Juvenile Striped Bass Relative Abundance In The Virginia Portion Of Chesapeake Bay, January 2011-December 2011 : Annual Progress Report, Leonard S. Machut, Mary C. Fabrizio

Reports

The 2011 striped bass juvenile abundance index is 27.09 and is significantly higher than the historic average of 7.92. Unlike previous years, the 2011 York River index was the highest among Virginia watersheds with high recruitment in both the Pamunkey and Mattaponi rivers. All individual river JAI values were significantly higher than their respective historic averages except for the Chickahominy River which was not significantly different from its historic average. This suggests a strong year class was produced in the Virginia portion of Chesapeake Bay in 2011. Sampling of auxiliary stations provides greater spatial coverage of the nursery grounds and …

The Status Of Virginia's Public Oyster Resource 2011, Melissa Southworth, Roger L. Mann

Reports

This report summarizes data collected during 2011 in the Virginia portion of the Chesapeake Bay. The report is composed of two parts, part one, oyster recruitment (shell string) in Virginia and part two, dredge survey of selected oyster bars in Virginia.