Animal Sciences Commons^™

Liquid Chromatography With Tandem Mass Spectrometry Method Development For The Determination Of Β–Defensins In Bovine Milk, Symone T. Whalin

Masters Theses & Specialist Projects

Bovine mastitis, caused by a wide array of pathogens, results in a substantial economic loss for the dairy cattle livestock industry. β-defensins are a part of the bovine’s innate immune system and act as the first line of defense against mastitis. Only foundational research has been done on β-defensins’ ability to treat and prevent mastitis. There have been no analytical methods reported in the literature for analyzing β-defensins in bovine milk. This research aims to create an analytical approach to determine β-defensins in bovine milk. It is challenging to determine an analyte in a complex sample matrix, and milk is …

Toxic Effects Of Silver Ions On Early Developing Zebrafish Embryos Distinguished From Silver Nanoparticles, Martha S. Johnson, Preeyaporn Songkiatisak, Pavan Kumar Cherukuri, Xiao-Hong Nancy Xu

Chemistry & Biochemistry Faculty Publications

Currently, effects of nanomaterials and their ions, such as silver nanoparticles (Ag NPs) and silver ions (Ag⁺), on living organisms are not yet fully understood. One of the vital questions is whether nanomaterials have distinctive effects on living organisms from any other conventional chemicals (e.g., their ions), owing to their unique physicochemical properties. Due to various experimental protocols, studies of this crucial question have been inconclusive, which hinders rational design of effective regulatory guidelines for safely handling NPs. In this study, we chronically exposed early developing zebrafish embryos (cleavage-stage, 2 hours post-fertilization, hpf) to a dilution series of …

Calcification, Dissolution And Test Properties Of Modern Planktonic Foraminifera From The Central Atlantic Ocean, Stergios D. Zarkogiannis, Shinya Iwasaki, James William Buchanan Rae, Matthew W. Schmidt, P. Graham Mortyn, George Kontakiotis, Jennifer E. Hertzberg, Rosalind E.M. Rickaby

OES Faculty Publications

The mass of well-preserved calcite in planktonic foraminifera shells provides an indication of the calcification potential of the surface ocean. Here we report the shell weight of 8 different abundant planktonic foraminifera species from a set of core-top sediments along the Mid-Atlantic Ridge. The analyses showed that near the equator, foraminifera shells of equivalent size weigh on average 1/3 less than those from the middle latitudes. The carbonate preservation state of the samples was assessed by high resolution X-ray microcomputed tomographic analyses of Globigerinoides ruber and Globorotalia truncatulinoides specimens. The specimen preservation was deemed good and does not overall explain …

Short-Term Low Salinity Mitigates Effects Of Oil And Dispersant On Juvenile Eastern Oysters: A Laboratory Experiment With Implications For Oil Spill Response Activities, Meagan N. Schrandt, Sean Powers, F.Scott Rikard, Wilawan Thongda, Eric Peatman

University Faculty and Staff Publications

Following the Deepwater Horizon oil spill, eastern oyster (Crassostrea virginica) reefs in the northern Gulf of Mexico were exposed to oil and various associated clean-up activities that may have compromised oyster reef health. Included in the exposure was oil, dispersant, and in some locales, atypical salinity regimes. Oil and dispersants can be detrimental to oysters and the effects of salinity depend on the level. In addition to these extrinsic factors, genetic diversity of oyster populations may help the oysters respond to stressors, as demonstrated in other systems. We used a 3×3×2 factorial design to experimentally examine the effects …

Detection And Quantitation Of Tetracycline Antibiotics In Agricultural Swine Wastes, Ali Jamal Abdulrheem

Masters Theses & Specialist Projects

The spread of tetracyclines through agricultural systems is causing the present bacteria to develop antibiotic resistance. The spread of this bacteria, as well as the tetracycline antibiotics in the environment is dangerous because these antibiotics pose health hazards for humans. The overuse of antibiotics, which are added to livestock feed, results in the antibiotics being released into the environment via animal feces. In this research, we have attempted to design an analytical method to isolate antibiotics from agricultural wastes with subsequent detection using liquid chromatography and mass spectrometry (LC-MS). The antibiotics investigated in this study were tetracycline, chlortetracycline, and oxytetracycline. …

Questioning Ecosystem Assessment And Restoration Practices In A Major Urban Estuary: Perpetuating Myths Of Degradation In Spite Of Facts, John T. Tanacredi Ph.D., Martin P. Schreibman, Kevin Mcdonnell

Faculty Works: CERCOM

The Jamaica Bay ecosystem is a dichotomy. It encompasses more than 12,000 acres of coastal estuarine marshes and an ecological diversity rivaling any coastal environment in the world. It is considerably altered, and is affected by a variety of ecological insults directly related to the fact that more than 14 million people live in its vicinity. Environmental protection institutions responded to the challenge of protecting the bay, surrounding wetlands and recreational benefits by addressing the increasing load of contaminants into the ecosystem. Billions of dollars have been spent during the past five decades on restoration attempts, including upgrading wastewater treatment …

An Assessment Of Stable Hydrogen-Isotope Analysis Methods To Assign Geographic Origin To Migratory Red-Tailed Hawks (Buteo Jamaicensis), Carla Marie Ahlschwede

Department of Environmental Studies: Undergraduate Student Theses

Stable-hydrogen isotopes are becoming an increasingly popular method of studying migratory birds, though sample preparation methods may affect results. In this study I examined feathers from red-tailed hawks (Buteo jamaicensis) to determine the relationship between measure of δD due to inter-feather variation or drying methods, assessed the accuracy of results by using two birds of known-origin and estimated possible natal origins of migratory red-tailed hawks. Two feathers per individual were taken from 81 wild hawks caught at Hitchcock Nature Center near Crescent IA and from 2 rescued red-tailed hawks, Raptor Recovery Nebraska near Eagle, NE. 119 of the …

Herbicides And Amphibian Populations, Zach Shirk

Department of Environmental Studies: Undergraduate Student Theses

Amphibians are a unique class of species that are found worldwide except Antarctica and Greenland. They range in size from a few millimeters to over six feet long. Amphibian’s habitats are as various as their size, but one thing in common is that amphibians require an aquatic location to breed. Amphibians live in deserts, mountain prairies, rain forest, wetlands, and almost everywhere in between. Amphibians are an integrated part of most natural ecosystems across the world. Amphibians are a critical part of many food chains; they provide the important link between secondary and tertiary consumers. Amphibians are indicator species in …

Limulus In The Limelight: Exploring An Ancient Species, John Tanacredi Ph.D.

Faculty Works: CERCOM

In an era when sports numbers shatter historical ceilings (especially in baseball) and fall by the wayside like fall leaves, a most enduring record of life continues to crawl along emerging from the sea early each spring pronouncing their incredible "record" of existences... over 350 million years. Now there is a number that even the rarified air of baseball salaries can admire. Yet, today the remarkable sea creature which endured over 100 million years of dramatically changing earth history prior to the existence of the dinosaurs, and which is comprised of only four species globally, is being tested for its …

Habitat Use Of Sympatrically Nesting Fish Crows And American Crows, Brook Lauro, John Tanacredi Ph.D.

Faculty Works: CERCOM

We examined habitat use of sympatric Fish Crows (Corvus ossifragus) and American Crows (C. brachyrhynchos) nesting in the vicinity of waterbird breeding locations at the Rockaway Peninsula, New York City. Fish Crows nested significantly more often at natural habitats, including coastal dunes and salt marsh islands; American Crows nested significantly more often at residential and recreational areas. In regard to potential foraging areas, Fish Crows nested closer to waterbird colonies and to the water's edge while American Crows nested closer to a garbage source and to lawns. Fish Crows nested significantly more often in deciduous trees …

Water Quality Characterization And Mathematical Modeling Of Dissolved Oxygen In The East And West Ponds, Jamaica Bay Wildlife Refuge, Krishnanand Maillacheruvu, D Roy, John Tanacredi Ph.D.

Faculty Works: CERCOM

The current study was undertaken to characterize the East and West Ponds and develop a mathematical model of the effects of nutrient and BOD loading on dissolved oxygen (DO) concentrations in these ponds. The model predicted that both ponds will recover adequately given the average expected range of nutrient and BOD loading due to waste from surface runoff and migratory birds. The predicted dissolved oxygen levels in both ponds were greater than 5.0 mg/L, and were supported by DO levels in the field which were typically above 5.0 mg/L during the period of this study. The model predicted a steady-state …

An Examination Of Predatory Pressures On Piping Plovers Nesting At Breezy Point, New York, Brook Lauro, John Tanacredi Ph.D.

Faculty Works: CERCOM

This study examines predatory threats to Piping Plovers (Charadrius melodus) nesting at Breezy Point, Gateway National Recreation Area, New York. Several methods used include: 1) an evaluation of reproductive success data with documentation of predation to eggs and chicks, 2) predator surveys, and 3) an artificial nest study. The range of breeding pairs nesting from 1988-1996 was 11-19, with an average of 15.8 (SE ± 0.79) pairs/season. The average number of eggs hatched and chicks fledged per year for pairs was 2.2 ± 0.23 and 0.8 ± 0.16 respectively. Reasons for egg losses often went undetected (68%) but …

Managing Birds And Controlling Aircraft In The Kennedy Airport–Jamaica Bay Wildlife Refuge Complex: The Need For Hard Data And Soft Opinions, Kevin Brown, R. Michael Erwin, Milo E. Richmond, P A. Buckley, John Tanacredi Ph.D., Dave Avrin

Faculty Works: CERCOM

During the 1980s, the exponential growth of laughing gull (Larus atricilla) colonies, from 15 to about 7600 nests in 1990, in the Jamaica Bay Wildlife Refuge and a correlated increase in the bird-strike rate at nearby John F. Kennedy International Airport (New York City) led to a controversy between wildlife and airport managers over the elimination of the colonies. In this paper, we review data to evaluate if: (1) the colonies have increased the level of risk to the flying public; (2) on-colony population control would reduce the presence of gulls, and subsequently bird strikes, at the airport; …

Use Of Py-Gc/Ms Analysis Techniques In Animal Waste Management: A Preliminary Survey Of Dairy Manures, Daniel L. Vaughn, Michael A. Kruge

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

The increasing practice of industrial-scale agriculture tends to concentrate large masses of animal waste in relatively compact areas, potentially leading to excessive release of polluting nutrients into waterways during major storms. Anaerobic treatment conditions are generally favored to conserve nitrate N as an agricultural commodity. However, overall N contents in waste are often in excess of crop fertilization needs: storing excess N in soluble nitrate form increases pollution potential. Thus the perceived needs of agriculture and society-at-large become at odds. Organic nitrogen forms (e.g., proteins) are more environmentally stable and are less subject to unintentional release. Although U.S. farmers tend …

Phytosociological Analysis Of Restored And Managed Grassland Habitat Within An Urban National Park, Andrew M. Greller, Celestine Durando, Leslie F. Marcus, D. Siril A. Wijesundara, Michael D. Byer, Robert Cook, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

Floyd Bennett Field (FBF), 579 ha in extent, is a division of Gateway National Recreation Area. It is the site of a former airfield, constructed by filling salt marshes with dredged materials. Except for the portion known locally as the “North Forty,” all sections of FBF have been cut over to maintain low vegetation. A grassland management plan (GRAMP) for 165 ha was initiated in 1986, to maintain habitats for open-country birds. Over the next few years, encroaching woody vegetation was removed manually and mechanically from the management area. Since then, it has been maintained as a grassland and receives …

Changes In Reproductive Morphology And Physiology Observed In The Amphipod Crustacean, Melita Nitida Smith, Maintained In The Laboratory On Polluted Estuarine Sediments, John T. Tanacredi Ph.D., B. Borowsky, P. Aitken-Ander

Faculty Works: CERCOM

An earlier study showed that the amphipod crustacean Melita nitida Smith maintained on sediments dosed with waste crankcase oil developed physiological and morphological abnormalities. Most notably, mature females developed abnormal setae along the edges of their brood plates. The present study was conducted to determine whether similar abnormalities might be induced in animals maintained on polluted field sediments containing petroleum by-products among other toxic substances. In the laboratory, heterosexual pairs were maintained on three sediments taken from Jamaica Bay (New York) plus one control sediment and one toxic substratum (Ulva lactuca (L.) thalli). The results mirrored the results of …

Rare And Endangered Plants At Gateway National Recreation Area: A Case For Protection Of Urban Natural Areas, Richard Stalter, Michael D. Byer, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

The diversity of native plant species in urban environments is usually overlooked when biodiversity levels are considered. Inventories of native plants reveal many to be rare species surviving the harsh conditions encountered in urban ecosystems. Knowledge of their existence and an inventory of their distribution will assist in maintaining these populations. Protection strategies for rare plant species are outlined for urban National Parks.

Liver Lesions In Winter Flounder (Pseudopleuronectes Americanus) From Jamaica Bay, New York: Indications Of Environmental Degradation, Thomas P. Augspurger, Roger L. Herman, Jeff S. Hatfield, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

Liver sections of winter flounder (Pseudopleuronectes americanus) collected from Jamaica Bay and Shinnecock Bay, New York, in 1989, were examined microscopically to determine the pervasiveness of liver lesions observed previously in Jamaica Bay winter flounder. Neoplastic lesions were not detected in fish from Jamaica Bay or the Shinnecock Bay reference site. Twenty-two percent of Jamaica Bay winter flounder examined (n=103) had unusual vacuolization of hepatocytes and biliary pre-ductal and ductal cells (referred to hereafter as the vacuolated cell lesion). The lesion, identical to that found in 25% of Jamaica Bay winter flounder examined in 1988, has previously been …

Variability In Growth And Age Structure Among Populations Of Ribbed Mussels, Geukensia Demissa (Dillwyn) (Bivalvia: Mytilidae), In Jamacia Bay, New York (Gateway Nra), David R. Franz, John Tanacredi Ph.D.

Faculty Works: CERCOM

Growth rates, body weight, density and biomass of ribbed mussels, Geukensia demissa (Dillwyn), were determined at Spartina alterniflora marsh-flat sites in Jamaica Bay, New York (Lower Hudson Estuary). Cumulative growth and annual growth increments varied but rates were lower at sites within the central bay relative to peripheral sites. Local variability both in size at Ring-1 and size-specific annual growth rates probably account for the variability in cumulative length. No pattersn were noted in frequency distributions of shell size but congruence in age structure was observed among neighboring sites in some areas of the bay. Mussel densities were greater within …

Rotating Biological Contractors As An Effective Removal System Of Waste Petroleum Hydrocarbons From Untreated Wastewaters, John Tanacredi Ph.D., R. C. Cardenas

Faculty Works: CERCOM

A staged, partially submerged rotating biological disk system was assessed to determine its performance in the reduction of detectable concentrations of polynuclear aromatic hydrocarbons (PAH0 attributable to waste crankcase oils (WCCO) in wastewater effluent. Results indicate that such biological systems for the removal of WCCO aromatic hydrocarbons may be a viable alternative to secondary treatment systems commonly being employed.

Characterization Of Polycyclic Aromatic Hydrocarbons (Pahs) By The Kinetics Of Depuration In Bivalve Molluscs, Mercenaria Mercenaria, C Sato, H Kim, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

The objectives of this study were to examine depuration aspects of polycyclic aromatic hydrocarbons (PAHs) in a hard-shell clam Mercenaria mercenaria, and to characterize PAHs by the depuration kinetics. In this investigation, clams were exposed to artificial sea water containing a mixture of eight PAHs (i.e., naphthalene, fluorene, phenanthrene, flouranthene, pyrene, benz[a]anthracene, chrysene, benzo[a]pyrene) for 48 hours. The clams were then transferred into clean (PAH-free) artificial seawater for release, and sampled at predetermined intervals. The target PAHs were extracted from the clam tissue and quantified by a gas chromatograph equipped with a capillary glass column and FID.

The results …

Biodepuration Of Polynuclear Aromatic Hydrocarbons From A Bivalve Mollusk, Mercenaria Mercenaria L, John T. Tanacredi Ph.D., Raul R. Cardenas

Faculty Works: CERCOM

Mercenaria mercenaria, exposed in vitro for 48 h to nine parent polynuclear aromatic hydrocarbons (PAHs) found in waste crankcase oil (WCCO) and analysed by multiparametric analysis over a 45- day depuration period in an activated carbon filtration aquaria system, did not depurate PAHs, but rather maintained them at detectable levels. Uptake of PAHs was shown to be directly related to clam weight. A cluster analysis of empirical results reaffirmed a biostabilization in PAH groupings in clam tissue over a 45-day depuration period and exhibited no evidence of a decreasing trend in total PAHs when subjected to ANOVA. Due to the …

Naphthalenes Associated With Treated Wastewater Effluents In An Urban National Wildlife Refuge, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

Our coastal enviornments have become the invariable recipient of petroleum and petroleum wastes. Demands for petroleum products coupled with a lack of economic incentive to recycle waste oil, will increase the probability of greater concentrations of petroleum derived hyrdrocarbons entering our estuaries (CEQ Report, 1983).

Lake Mead Cover Enhancement Project, Jennifer Stevens Haley, Suzanne Leavitt, Larry Paulson, Donald H. Baepler

Publications (WR)

Ninety-three wildlife agencies were surveyed for information on their attempts to improve fish habitat. In addition, an annotated bibliography including over 100 summaries was completed on:

1. largemouth bass cover requirements and preferences,

2. use and effectiveness of artificial cover,

3. aquatic plant introduction and species requirements for germination and establishment,

4. terrestrial plant introduction and species requirements for germination and establishment, and

5. nutrient exchange between sediment, aquatic plants, and water.

A reconnaissance of existing terrestrial and aquatic vegetation was completed in June 1986 including the production of a video tape of the Nevada shoreline of Lake Mead.

Cover …

A Proposal To Fertilize The Overton Arm And Gregg Basin Areas Of Lake Mead, Larry J. Paulson

Publications (WR)

Several limnological studies have been conducted in Lake Mead during the past decade. The recent studies clearly show that most of Lake Mead is deficient in nutrients, especially phosphorus, and very low in productivity. The reservoir-wide average total phosphorus concentration for 1981 - 1982 was only 9 mg/m³. This is below levels found In most oligotrophic lakes and reservoirs. Algal biomass, as measured by chlorophyll-a, averaged only 1.5 mg/m³. That also places Lake Mead in the oligotrophic range. Transparency, as measured by a Secchi disc, averaged 9-5 m in Lake Mead during 1981-1982. That far exceeds …

Petroleum Hydrocarbons From Effluents: Detection In Marine Environment, John T. Tanacredi Ph.D.

Faculty Works: CERCOM

The marine environment has become the primary disposa ground for an increasing quantity of petroleum wastes. Mushrooming demands for petroleum products and the lack of economic incentive to recycle waste oil will increase the concentrations of detrimental petroleum hydrocarbons in the marine environment

Although a continuous, low-level discharge of waste petroleum hydrocarbons into the marine environment may not be as dramatic as a major oil spill, the consequences could be more devastating over an extended period. As noted by Blumer, earlier interpretations of the environmental effects of oil must not be reevaluated in the light of recent evidence of its …

Biological Studies Of Selected Reaches And Tributaries Of The Colorado River, Nelson Thomas, Federal Water Pollution Control Administration

Publications (WR)

This report fulfills the request of the Colorado River Basin Project, Denver, Colorado, to determine the effects of municipal and industrial wastes on the aquatic life in selected waters of the Colorado River Basin. These studies were conducted with the assistance of personnel from the Colorado River Basin Project.