Life Sciences Commons^™

Ecological Risk Assessment Of The Exmouth Gulf Prawn Managed Fishery, Department Of Primary Industries And Regional Development

WA Marine Stewardship Council report series

The Department of Primary Industries and Regional Development (DPIRD, Department) in Western Australia (WA) uses an Ecosystem-Based Fisheries Management (EBFM) approach that considers all relevant ecological as well as social, economic and governance issues to deliver community outcomes (Fletcher et al. 2010; 2012). Ecological risk assessments (ERAs) are undertaken periodically to assess the impacts of fisheries on all the different components of the aquatic environments in which they operate.

Ecological Risk Assessment Of The Abrolhos Islands And Mid-West Trawl Managed Fishery, Department Of Primary Industries And Regional Development

WA Marine Stewardship Council report series

The Department of Primary Industries and Regional Development (DPIRD, Department) in Western Australia (WA) uses an Ecosystem-Based Fisheries Management (EBFM) approach that considers all relevant ecological as well as social, economic and governance issues to deliver community outcomes (Fletcher et al. 2010; 2012). Ecological risk assessments (ERAs) are undertaken periodically to assess the impacts of fisheries on all the different components of the aquatic environments in which they operate.

Snp Population Genetic Data For The Seagrass Halodule Uninervis From Pilbara Region, Western Australia, Kathryn Margaret Mcmahon, Richard Evans

Research Datasets

This dataset contains 80 SNP loci from 15 locations with 25-47 samples per locations. Each column contains data from two alleles. All genotyped samples are included. Prior to population genetic analysis clone mates were identified and removed.

Contribution Of Seagrass Blue Carbon Toward Carbon Neutral Policies In A Touristic And Environmentally-Friendly Island, Camila Bedulli, Paul S. Lavery, Matt Harvey, Carlos M. Duarte, Oscar Serrano

Research outputs 2014 to 2021

Estimates of organic carbon (C_org) storage by seagrass meadows which consider inter-habitat variability are essential to understand their potential to sequester carbon dioxide (CO₂) and derive robust global and regional estimates of blue carbon storage. In this study, we provide baseline estimates of seagrass extent, and soil C_org stocks and accumulation rates from different seagrass habitats at Rottnest Island (in Amphibolis spp., Posidonia spp., Halophila ovalis, and mixed Posidonia/Amphibolis spp. meadows). The C_org stocks in 0.5 m thick seagrass soil deposits, derived from 24 cores, were 5.1 ± 0.7 kg C_org m^{–2 …}

Organic Chemistry Insights For The Exceptional Soil Carbon Storage Of The Seagrass Posidonia Australis, Oscar Serrano, Mohammad Rozaimi, Paul Lavery, Ronald J. Smernik

Research outputs 2014 to 2021

The high organic carbon (OC) stores in seagrass meadows have led to their recognition as significant Blue Carbon sinks, though the diagenetic conditions that enable OC retention in seagrass soils remain poorly understood. In this study, seagrass soils were sampled from a Posidonia australis meadow in Oyster Harbour (Albany; south-western Australia) to investigate the preservation of sedimentary OC. We analysed soil characteristics (colour, grain size and redox potential), radiocarbon age, and characterised the soil organic matter (OM) using solid state CP/MAS 13C NMR spectroscopy to examine the preservation of OM down the soil profile. There was minimal change in organic …

Review Of Recreational Fishing Surveys In Western Australia, Alissa Tate, K. L. Ryan, Claire B. Smallwood, Cameron J. Desfosses, S.M Taylor, E.K. Lai, Stuart Blight

Fisheries Research Reports

Recreational fishing has been a popular activity in Western Australia for many years, with an estimated 25% of the population participating in this activity in 2017/18. Recreational fishing surveys have been implemented by the Department of Primary Industries and Regional Development (formally Department of Fisheries) since 1976.

Quantifying The Heterogeneity Of The Immunoglobulin G N-Glycome In An Ageing Australian Population: The Busselton Healthy Ageing Study, Alyce Russell

Theses: Doctorates and Masters

The use of immunoglobulin G N-glycomics to study chronic non-communicable disorders and other complex phenotypes emerged following the Human Genome Project. The consortium discovered that most phenotypes were too complex to be explained by genetics alone. Thus, the biological importance of epigenetics was recognised; heritable modifications to gene expression rather than the genome itself. Nglycosylation is a form of epigenetic regulation known as a post-translational modification. It stabilises the immunoglobulin G structure and alters downstream responses elicited by the antibody and is extensively studied as a candidate biomarker in the post-genomic era.

The N-glycosylation of immunoglobulin G itself is complex, …

Tropicalisation Of Temperate Seagrass Meadows In Western Australia: Predicting The Impact Of Tropical Herbivorous Fishes On Temperate Seagrass Meadows, Maria Samsonova

Theses: Doctorates and Masters

Rising sea temperatures through climate change produce shifts in the distribution of tropical species to temperate regions, a process termed “tropicalisation”. The poleward expansion of tropical herbivores into temperate seagrass meadows is predicted to increase grazing pressure and alter ecosystem services and processes in these seagrass systems. This study attempted to examine the effects of tropicalisation on temperate seagrass meadows along the western coast of Australia, where the increasing abundance of tropical consumers such as the herbivorous Siganus fuscescens has already been documented. Through the assessment of fish assemblages in seagrass meadows and the grazing levels on seagrass in 2001 …

An Investigation Into The Spatial Distribution, Habitat Selection And Resource Usage Of The Red Fox (Vulpes Vulpes) Inhabiting Urban Reserves Within Perth, Western Australia, Michael Thomas Main

Theses: Doctorates and Masters

I attempted to track a population of urban foxes in Kings Park, but due to collar failure, only one collar was retrieved. The GPS telemetry data from this fox produced home range estimates for minimum convex polygon (MCP) and kernel density (KD) of 0.302 km² and 0.331 km², respectively. The fox was predominantly active at night, with a ten-fold increase in movement during nocturnal periods when compared to daytime movements. Roads and man-made tracks were important for facilitating movement of the fox through its home range, with almost 97% of location fixes recorded within 100m of these features. The fox …

Status Reports Of The Fisheries And Aquatic Resources Of Western Australia 2018/19. State Of The Fisheries, Daniel J. Gaughan, K. Santoro

Status Reports of the Fisheries and Aquatic Resources

The Status Reports of the Fisheries and Aquatic Resources of Western Australia (SRFAR) provide an annual update on the state of the fish stocks and other aquatic resources of Western Australia (WA). These reports outline the most recent assessments of the cumulative risk status for each of the aquatic resources (assets) within WA’s six Bioregions using an Ecosystem Based Fisheries Management (EBFM) approach.

Non-Song Vocalizations Of Humpback Whales In Western Australia, Angela Recalde-Salas, Christine Erbe, Chandra Salgado Kent, Miles Parsons

Research outputs 2014 to 2021

This study presents non-song vocalizations of humpback whales (Megaptera novaeangliae) from two migratory areas off the Western Australian coast: Geographe Bay and Port Hedland. A total of 220 sounds were identified as non-song sounds in 193 h of recordings reviewed. Of those, 68 were measured and qualitatively classified into 17 groups using their spectral features. One group (HW-02) had a high level of variation in terms of spectral slope. However, further classification using statistical classification methods was not possible because of the small sample size. Non-song sound frequencies varied from 9 Hz to 6 kHz, with the majority of sounds …

2020 Western Australian Crop Sowing Guide, Brenda Shackley

Bulletins 4000 -

This edition of the 2020 Crop Sowing Guide includes the major crops grown in WA - wheat, barley, canola, oat and now a new section on lupin and pulses. The publication aims to provide information to support growers with decisions on the best choice of variety for each of the major crops for the upcoming season. The lupin and pulse sections also include an agronomy guide summary to support management decisions required for these high-valued crops.

Statewide Survey Of Boat-Based Recreational Fishing In Western Australia 2017/18, K. L. Ryan, N.G. Hall, E.K. Lai, Claire B. Smallwood, Alissa Tate, S.M Taylor, Brent S. Wise

Fisheries Research Reports

The statewide survey of boat-based recreational fishing includes three components: (i) off-site Phone Surveys (encompassing an initial Screening Survey, a longitudinal Phone-Diary Survey, and Post-Enumeration Surveys); (ii) on-site Boat Ramp Surveys; and (iii) Remote Camera Surveys. The main data collection period was the 12-months from September 2017 to August 2018 inclusive, with the Post-Enumeration Surveys occurring from September to December 2018.

Analysis Of The Value Of A Ewe In The Wa Sheep Industry, John Young, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock published reports

The WA flock is at a historically low level, however, sheep profitability is at record highs so rebuilding the state flock is an industry priority. Minimising ewe losses is a necessary component of the flock rebuilding. As a result of the feed shortage and possible grain shortage with high prices likely due to demand for grain from the east coast, local farmers may be tempted to underfeed their ewes during the summer/autumn period. Awareness and good information regarding the cost of mis-managing ewe nutrition will help minimize this temptation.

Invertebrate And Reef Health Research And Monitoring At Cocos (Keeling) Islands – 2019 Update, N Konzewitsch, S. N. Evans

Fisheries Research Reports

The five long term reef monitoring sites implemented by DPIRD in 2010, and surveyed annually until 2014, were resurveyed in April 2016 and February 2017. In 2016, a sixth monitoring site (site 6) was established in the marine protected area of the Pulu Keeling National Park (PKNP).

Integrated Survey Of Boat-Based Recreational Fishing In Inner Shark Bay 2018/19, S.M Taylor, Claire B. Smallwood, Cameron J. Desfosses, K. L. Ryan, Gary Jackson

Fisheries Research Reports

Inner Shark Bay is a popular recreational fishing destination. As recreational fishing occurs in a World Heritage Area and Marine Park, there is a need for ongoing reliable information on catches. Many boat-based recreational fishers in inner Shark Bay target Pink Snapper (Chrysophrys auratus).

Biosecurity Research And Development In Western Australia - Report By The Biosecurity Council Of Western Australia, Biosecurity Council Of Western Australia

Biosecurity published reports

Research and development (R&D) is crucial to managing Western Australia’s biosecurity risks and threats. There is a perception, however, that these risks and threats could be better recognised nationally, which may result in greater levels of funding for biosecurity R&D activities relevant to Western Australia (WA).

The purpose of this work was to provide advice to the Minister for Agriculture and Food on the status of biosecurity R&D in WA and opportunities to enhance biosecurity R&D funding in the State.

Recovering A Collapsed Abalone Stock Through Translocation. Seafood Crc Project No. 2011/762, Lachlan W.S. Strain, Jamin M. Brown, Anthony M. Hart

Fisheries Research Reports

A Roe’s Abalone (Haliotis roei) fishery in Western Australia (Area 8) suffered catastrophic mortality (99.9%) due to an anomalous environmental event in the summer of 2011. During this extreme marine heatwave there was a sustained period of elevated sea surface temperatures that rose to lethal levels for this species and effectively wiped out an entire stock at its northern distribution. Natural recovery within the foreseeable future was considered unlikely, thus providing a unique opportunity to test fishery restoration strategies for abalone. Over the course of this assisted recovery program (5.5 years) no natural recovery was observed in the region most …

Biosecurity Council Of Western Australia Annual Report 2018/2019, Biosecurity Council Of Western Australia

Biosecurity published reports

There were four key areas in which the Council focused during the year:

• the attributes required by a biosecurity 'combat' agency to effectively sustain a biosecurity response
• funding for biosecurity research and development in WA
• border biosecurity; and
• WA's preparedness for myrtle rust

Developing constructive advice to Government requires a comprehensive understanding of the needs and challenges of industry, Government and the community. It also requires an understanding of how changes to the biosecurity system might impact these groups and affect WA's biosecurity status. During 2018/19 the Council continued to monitor biosecurity-related developments at national and State levels; provided feedback …

Biosecurity Council Visit To Kununurra August 2019, Biosecurity Council Of Western Australia

Biosecurity published reports

In late 2018, the Biosecurity Council committed to holding regional meetings, possibly annually. The intent of regional meetings are to:

• Engage with local/regional stakeholders on biosecurity matters
• Build networks/relationships with key biosecurity stakeholders
• Provide a conduit to government/agencies for local/regional biosecurity stakeholders.

Council agreed to hold its first regional visit in Kununurra, located in the East Kimberley. The East Kimberley, has a unique set of biosecurity challenges — Kununurra is an important horticulture growing region, there is a large pastoral presence, it adjoins the Northern Territory (NT) border and is in close proximity to Indonesia, it is a hub for …

Crop And Climate Suitability For Irrigated Agriculture In The Midlands Area Of Western Australia, 2nd Edition, Leon Van Wyk

Resource management technical reports

The Midlands groundwater and land assessment is a $4.7 million Water for Food project. Its aim is to confirm groundwater availability at one or more focus areas that may form precincts of 2000–3000 hectares suitable for intensive irrigated horticulture. This report forms part of this project.

Firstly, this report describes the climate of the Midlands study area and highlights the subtle differences between the two selected focus areas, Irwin and Dinner Hill. It discusses the importance of climate in determining crop suitability. We also investigated the following additional factors that determine crop suitability: water quality, water quantity, land capability (soils) …

Tracking The Wa Sheep Flock, Kate Pritchett, Mandy Curnow

Animal production and livestock research reports

The Western Australian (WA) sheep industry experienced a year of uncertainty in 2018 due to the disruptions experienced in the live export trade and the reported poor lambing season. This paper discusses the possible effect of these factors on the size and composition of the WA flock in 2019.

Sustaining A Biosecurity Response: What Makes An Effective And Contemporary Biosecurity ‘Combat’ Agency? Summary Report By The Biosecurity Council Of Western Australia, Biosecurity Council Of Western Australia

Biosecurity published reports

The overall purpose of this work was to provide advice and guidance to the Minister for Agriculture and Food and Director General of the Department of Primary Industries and Regional Development (DPIRD) on how the combined skills and resources of DPIRD can better sustain a high-level biosecurity response whilst retaining the integrity of its other functions.

To develop this advice, two key activities were undertaken:

1. Information gathering and review (via literature review and key informant interviews) to identify the essential characteristics of a biosecurity combat agency; the skillsets required to respond to high-level biosecurity incidents; and ways biosecurity combat agencies …

Western Australian Sheep Producer Survey 2018, Mandy Curnow, Janet Conte

Animal production and livestock published reports

This survey was commissioned in 2018 by the Department of Primary Industries and Regional Development (DPIRD), following earlier surveys in 2011 and 2014 conducted as part of national producer surveys for the Cooperative Research Centre for Sheep Innovation (Sheep CRC). This report is therefore able to analyse respondents’ flock management over time.

The surveys were conducted by telephone with producers who had more than 500 sheep and were located in the Medium Rainfall Zone (MRZ) or Cereal Sheep Zone (CSZ). The sample sizes for the 2011, 2014 and 2018 surveys were 369, 368 and 389 respectively.

Systematic Review Of Gastrointestinal Nematodes Of Horses From Australia, Muhammad A. Saeed, Ian Beveridge, Ghazanfar Abbas, Anne Beasley, Jenni Bauquier, Edwina Wilkes, Caroline Jacobson, Kris J. Hughes, Charles El-Hage, Ryan O'Handley, John Hurley, Lucy Cudmore, Peter Carrigan, Lisa Walter, Brett Tennent-Brown, Martin K. Nielsen, Abdul Jabbar

Maxwell H. Gluck Equine Research Center Faculty Publications

Background: Equine gastrointestinal nematodes (GINs) have been the subject of intermittent studies in Australia over the past few decades. However, comprehensive information on the epidemiology of equine GINs, the efficacy of available anthelmintic drugs and the prevalence of anthelmintic resistance (AR) in Australasia is lacking. Herein, we have systematically reviewed existing knowledge on the horse GINs recorded in Australia, and main aspects of their pathogeneses, epidemiology, diagnoses, treatment and control.

Methods: Six electronic databases were searched for publications on GINs of Australian horses that met our inclusion criteria for the systematic review. Subsets of publications were subjected to review epidemiology, …

Implications Of Management Decisions On The Wa Sheep Flock In Response To Changing Markets, Kate Pritchett

Animal production and livestock research reports

The Western Australian (WA) sheep industry is profitable and productive and includes more than 4000 individual producers, processors and exporters as well as countless associated businesses and industries.

The industry makes a significant contribution to both the state’s agricultural production and the WA economy. In 2016/17 the gross value of agricultural production (GVAP) from the WA sheep industry totalled $1.4 billion. There is continuing demand for both wool and meat in export markets, giving strong incentives for increasing production of both wool and sheepmeat. This affords producers an opportunity to increase the productivity of their ewe flock and to grow …

Summary Of The West Coast Rock Lobster Managed Fishery Science And Modelling Review, Simon De Lestang, Jason R. How, Nick Caputi, Emma-Jade Tuffley, Mark Rossbach

Fisheries Research Reports

An independent peer review of the science and modelling associated with the West Coast Rock Lobster Managed Fishery was undertaken in May/June 2018. The impetus behind this review was two-fold, i) to address industry concerns that stock assessment modelling was not reflecting what was being experienced by fishers on-water, and ii) to increase stakeholders understanding of, and confidence in, the stock assessment process while ensuring that the process was commensurate with contemporary scientific practices.

Development Of An Industry-Based Habitat Mapping/Monitoring System Frdc Project No 2011/021, Simon De Lestang, Matthew B. Pember, Dirk Slawinski

Fisheries Research Reports

Mapping / monitoring in the marine environment can be a very costly exercise. Scientists from the Department of Primary Industries and Regional Development; Fisheries Division (FD) and the Commonwealth Scientific and Industrial Research Organisation (CSIRO) have developed a small, low-cost automated camera system that, when fitted to commercial fishing gear, can achieve this at minimal cost. The POTBot (Pictures Of The Bottom) system is a cheap, small “smart” camera that can track its position globally and the date and time, and can record high-definition video and water temperature readings when it determines it has been deployed into the ocean.

Status Reports Of The Fisheries And Aquatic Resources Of Western Australia 2017/18. State Of The Fisheries, Daniel J. Gaughan, Brett Molony, K. Santoro

Status Reports of the Fisheries and Aquatic Resources

The Status Reports of the Fisheries and Aquatic Resources of Western Australia (SRFAR) provide an annual update on the state of the fish stocks and other aquatic resources of Western Australia (WA). These reports outline the most recent assessments of the cumulative risk status for each of the aquatic resources (assets) within WA’s six Bioregions using an Ecosystem Based Fisheries Management (EBFM) approach.

Leucaena Esculenta - Environmental Weed Risk Assessment 2019, Department Of Primary Industries And Regional Development, Western Australia

Environmental Weed Risk Assessments

Introducing new plants to an area may have both positive and negative effects on the environment, economy and community. To minimise the negative environmental impact of introducing new agricultural species, DPIRD conducts a risk assessment procedure based on widely accepted scientific standards. This report assesses Leucaena esculenta