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Articles 721 - 750 of 1015

Full-Text Articles in Life Sciences

The Ocean Sampling Day Consortium, Anna Kopf, Mesude Bicak, Renzo Kottman, Julia Schnetzer, Ivaylo Kostadinov, Katja Lehmann, Antonio Fernandez-Guerra, Christian Jeanthon, Eyal Rahav, Matthias Ulrich, Antje Wichels, Gunnar Gerdts, Paraskevi Polymenakou, Giorgos Kotoulas, Rania Siam, Rehab Z. Abdallah, Eva C. Sonnenschein, Thierry Cariou, Fergal O'Gara, Stephen Jackson, Sandi Orlic, Michael Steinke, Julia Busch, Bernardo Duarte, Isabel Caçador, João Canning-Clode, Oleksandra Bobrova, Viggo Marteinsson, Eyjolfur Reynisson, Clara Magalhães Loureiro, Gian Marco Luna, Grazia Marina Quero, Carolin R. Löscher, Anke Kremp, Marie E. Delorenzo, Lise Øvreås, Jennifer Tolman, Julie Laroche, Antonella Penna, Marc Frischer, Timothy Davis, Barker Katherine, Christopher P. Meyer, Sandra Ramos, Catarina Magalhães, Florence Jude-Lemeilleur, Ma Leopoldina Aguirre-Macedo, Shiao Y. Wang, Nicole Poulton, Scott Jones, Rachel Collin, Jed A. Fuhrman, Pascal Conan, Cecilia Alonso, Noga Stambler, Kelly Goodwin, Michael M. Yakimov, Federico Baltar, Levente Bodrossy, Jodie Van De Kamp, Dion Mf Frampton, Martin Ostrowski, Paul Van Ruth, Paul Malthouse, Simon Claus, Klaas Deneudt, Jonas Mortelmans, Sophie Pitois, David Wallom, Ian Salter, Rodrigo Costa, Declan C. Schroeder, Mahrous M. Kandil, Valentina Amaral, Florencia Biancalana, Rafael Santana, Maria Luiza Pedrotti, Takashi Yoshida, Hiroyuki Ogata, Tim Ingleton, Kate Munnik, Naiara Rodriguez-Ezpeleta, Veronique Berteaux-Lecellier, Patricia Wecker, Ibon Cancio, Daniel Valout, Christina Bienhold, Hassan Ghazal, Bouchra Chaouni, Soumya Essayeh, Sara Ettamimi, El Houcine Zaid, Noureddine Boukhatem, Abderrahim Bouali, Rajaa Chahboune, Said Barrijal, Mohammed Timinouni, Fatima El Otmani, Mohamed Bennani, Marianna Mea, Nadezhda Todorova, Ventzislav Karamfilov, Petra Ten Hoopten, Guy Cochrane, Stephanie L'Haridon, Kemal Can Bizel, Alessandro Vezzi, Federico M. Lauro, Patrick Martin, Rachelle M. Jensen, Jamie Hinks, Susan Gebbels, Riccardo Rosselli, Fabio De Pascale, Riccardo Schiavon, Antonina Dos Santos, Emilie Villar, Stéphane Pesant, Bruno Cataletto, Francesca Malfatti, Ranjith Edirisinghe, Jorge A. Herrera Silveira, Michele Barbier, Valentina Turk, Tinkara Tinta, Wayne J. Fuller, Ilkay Salihoglu, Nedime Serakinci, Mahmut Cerkez Ergoren, Eileen Bresnan, Juan Iriberri, Paul Anders Fronth Nyhus, Edvardsen Bente, Hans Erik Karlsen, Peter N. Golyshin, Josep M. Gasol, Snejana Moncheva, Nina Dzhembekova, Zackary Johnson, Christopher Daivd Sinigalliano, Maribeth Louise Gidley, Adriana Zingone, Roberto Danovaro, George Tsiamis, Melody S. Clark, Ana Cristina Costa, Monia El Bour, Ana M. Martins, R. Eric Collins, Anne-Lise Ducluzeau, Jonathan Martinez, Mark J. Costello, Linda A. Amaral-Zettler, Jack A. Gilbert, Neil Davies, Dawn Field, Frank Oliver Glöckner Jun 2015

The Ocean Sampling Day Consortium, Anna Kopf, Mesude Bicak, Renzo Kottman, Julia Schnetzer, Ivaylo Kostadinov, Katja Lehmann, Antonio Fernandez-Guerra, Christian Jeanthon, Eyal Rahav, Matthias Ulrich, Antje Wichels, Gunnar Gerdts, Paraskevi Polymenakou, Giorgos Kotoulas, Rania Siam, Rehab Z. Abdallah, Eva C. Sonnenschein, Thierry Cariou, Fergal O'Gara, Stephen Jackson, Sandi Orlic, Michael Steinke, Julia Busch, Bernardo Duarte, Isabel Caçador, João Canning-Clode, Oleksandra Bobrova, Viggo Marteinsson, Eyjolfur Reynisson, Clara Magalhães Loureiro, Gian Marco Luna, Grazia Marina Quero, Carolin R. Löscher, Anke Kremp, Marie E. Delorenzo, Lise Øvreås, Jennifer Tolman, Julie Laroche, Antonella Penna, Marc Frischer, Timothy Davis, Barker Katherine, Christopher P. Meyer, Sandra Ramos, Catarina Magalhães, Florence Jude-Lemeilleur, Ma Leopoldina Aguirre-Macedo, Shiao Y. Wang, Nicole Poulton, Scott Jones, Rachel Collin, Jed A. Fuhrman, Pascal Conan, Cecilia Alonso, Noga Stambler, Kelly Goodwin, Michael M. Yakimov, Federico Baltar, Levente Bodrossy, Jodie Van De Kamp, Dion Mf Frampton, Martin Ostrowski, Paul Van Ruth, Paul Malthouse, Simon Claus, Klaas Deneudt, Jonas Mortelmans, Sophie Pitois, David Wallom, Ian Salter, Rodrigo Costa, Declan C. Schroeder, Mahrous M. Kandil, Valentina Amaral, Florencia Biancalana, Rafael Santana, Maria Luiza Pedrotti, Takashi Yoshida, Hiroyuki Ogata, Tim Ingleton, Kate Munnik, Naiara Rodriguez-Ezpeleta, Veronique Berteaux-Lecellier, Patricia Wecker, Ibon Cancio, Daniel Valout, Christina Bienhold, Hassan Ghazal, Bouchra Chaouni, Soumya Essayeh, Sara Ettamimi, El Houcine Zaid, Noureddine Boukhatem, Abderrahim Bouali, Rajaa Chahboune, Said Barrijal, Mohammed Timinouni, Fatima El Otmani, Mohamed Bennani, Marianna Mea, Nadezhda Todorova, Ventzislav Karamfilov, Petra Ten Hoopten, Guy Cochrane, Stephanie L'Haridon, Kemal Can Bizel, Alessandro Vezzi, Federico M. Lauro, Patrick Martin, Rachelle M. Jensen, Jamie Hinks, Susan Gebbels, Riccardo Rosselli, Fabio De Pascale, Riccardo Schiavon, Antonina Dos Santos, Emilie Villar, Stéphane Pesant, Bruno Cataletto, Francesca Malfatti, Ranjith Edirisinghe, Jorge A. Herrera Silveira, Michele Barbier, Valentina Turk, Tinkara Tinta, Wayne J. Fuller, Ilkay Salihoglu, Nedime Serakinci, Mahmut Cerkez Ergoren, Eileen Bresnan, Juan Iriberri, Paul Anders Fronth Nyhus, Edvardsen Bente, Hans Erik Karlsen, Peter N. Golyshin, Josep M. Gasol, Snejana Moncheva, Nina Dzhembekova, Zackary Johnson, Christopher Daivd Sinigalliano, Maribeth Louise Gidley, Adriana Zingone, Roberto Danovaro, George Tsiamis, Melody S. Clark, Ana Cristina Costa, Monia El Bour, Ana M. Martins, R. Eric Collins, Anne-Lise Ducluzeau, Jonathan Martinez, Mark J. Costello, Linda A. Amaral-Zettler, Jack A. Gilbert, Neil Davies, Dawn Field, Frank Oliver Glöckner

Faculty Publications

Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.


Environmental And Adaptive Buffers That Mediate The Response Of Subalpine Ecosystems To Environmental Change, Lafe G. Conner Jun 2015

Environmental And Adaptive Buffers That Mediate The Response Of Subalpine Ecosystems To Environmental Change, Lafe G. Conner

Student Works

This document reports the results of 4 studies of subalpine ecosystem ecology, describing ways that spatial heterogeneity in soils and plant communities mediate ecosystem responses to environmental change. Ecosystem responses to environmental change are also mediated by regional climate patterns and interannual variability in weather. In the first chapter we report the results of an experiment to test for the mediating effects of associational resistance in a forest community that experienced wide-spread beetle kill. We found that Engelmann spruce were more likely to survive a beetle outbreak when growing in low densities (host dilution) and not through other types of …


Environmental And Adaptive Buffers That Mediate The Response Of Subalpine Ecosystems To Environmental Change, Lafe G. Conner Jun 2015

Environmental And Adaptive Buffers That Mediate The Response Of Subalpine Ecosystems To Environmental Change, Lafe G. Conner

Theses and Dissertations

This document reports the results of 4 studies of subalpine ecosystem ecology, describing ways that spatial heterogeneity in soils and plant communities mediate ecosystem responses to environmental change. Ecosystem responses to environmental change are also mediated by regional climate patterns and interannual variability in weather. In the first chapter we report the results of an experiment to test for the mediating effects of associational resistance in a forest community that experienced wide-spread beetle kill. We found that Engelmann spruce were more likely to survive a beetle outbreak when growing in low densities (host dilution) and not through other types of …


Branching Out: How Virginia Can Strategically Use Trees To Combat Biodiversity Loss, Taylor Pfeiffer Apr 2015

Branching Out: How Virginia Can Strategically Use Trees To Combat Biodiversity Loss, Taylor Pfeiffer

Environmental Studies Senior Seminar Projects

Biodiversity loss is a particularly concerning effect of climate change because as greenhouse gas emissions increase global temperatures, decreases in the abundance and diversity of species has reduced ecosystem resiliency to these changes (Verchot et al. 2007). Weakened ecosystems and threatened species decrease the environment’s capacity to provide humans with services like safe drinking water, fuel, and protection from natural disasters, just to name a few (US EPA 2013). The agricultural industry plays a unique role in this environmental conversation, as farmland both contributes to climate change and is jeopardized by the negative effects created by the issue in a …


Evolution And Biodiversity, Timothy Henkel, Emily Croteau, Matthew Waters Apr 2015

Evolution And Biodiversity, Timothy Henkel, Emily Croteau, Matthew Waters

Biological Sciences Grants Collections

This Grants Collection for Evolution and Biodiversity was created under a Round Four ALG Textbook Transformation Grant.

Affordable Learning Georgia Grants Collections are intended to provide faculty with the frameworks to quickly implement or revise the same materials as a Textbook Transformation Grants team, along with the aims and lessons learned from project teams during the implementation process.

Documents are in .pdf format, with a separate .docx (Word) version available for download. Each collection contains the following materials:

  • Linked Syllabus
  • Initial Proposal
  • Final Report


Subsistence Strategies In Traditional Societies Distinguish Gut Microbiomes, Alexandra J. Obregon-Tito, Raul Y. Tito, Jessica Metcalf, Krithivasan Sankaranarayanan, Jose C. Clemente, Luke K. Ursell, Zhenjiang Zech Xu, Will Van Treuren, Rob Knight, Patrick M. Gaffney, Paul Spicer, Paul Lawson, Luis Marin-Reyes, Omar Trujillo-Villarroel, Morris Foster, Emilio Guija-Poma, Luzmila Troncoso-Corzo, Christina Warinner, Andrew T. Ozga, Cecil M. Lewis Jr. Mar 2015

Subsistence Strategies In Traditional Societies Distinguish Gut Microbiomes, Alexandra J. Obregon-Tito, Raul Y. Tito, Jessica Metcalf, Krithivasan Sankaranarayanan, Jose C. Clemente, Luke K. Ursell, Zhenjiang Zech Xu, Will Van Treuren, Rob Knight, Patrick M. Gaffney, Paul Spicer, Paul Lawson, Luis Marin-Reyes, Omar Trujillo-Villarroel, Morris Foster, Emilio Guija-Poma, Luzmila Troncoso-Corzo, Christina Warinner, Andrew T. Ozga, Cecil M. Lewis Jr.

Biology Faculty Articles

Recent studies suggest that gut microbiomes of urban-industrialized societies are different from those of traditional peoples. Here we examine the relationship between lifeways and gut microbiota through taxonomic and functional potential characterization of faecal samples from hunter-gatherer and traditional agriculturalist communities in Peru and an urban-industrialized community from the US. We find that in addition to taxonomic and metabolic differences between urban and traditional lifestyles, hunter-gatherers form a distinct sub-group among traditional peoples. As observed in previous studies, we find that Treponema are characteristic of traditional gut microbiomes. Moreover, through genome reconstruction (2.2–2.5 MB, coverage depth × 26–513) and functional …


A Decline In Benthic Foraminifera Following The Deepwater Horizon Event In The Northeastern Gulf Of Mexico, Patrick Schwing, Isabel C. Romero, Gregg R Brooks, David W Hastings, Rebekka A Larson, David Hollander Mar 2015

A Decline In Benthic Foraminifera Following The Deepwater Horizon Event In The Northeastern Gulf Of Mexico, Patrick Schwing, Isabel C. Romero, Gregg R Brooks, David W Hastings, Rebekka A Larson, David Hollander

Marine Science Faculty Publications

Sediment cores were collected from three sites (1000-1200 m water depth) in the northeastern Gulf of Mexico from December 2010 to June 2011 to assess changes in benthic foraminiferal density related to the Deepwater Horizon (DWH) event (April-July 2010, 1500 m water depth). Short-lived radioisotope geochronologies (²¹⁰Pb, ²³⁴Th), organic geochemical assessments, and redox metal concentrations were determined to relate changes in sediment accumulation rate, contamination, and redox conditions with benthic foraminiferal density. Cores collected in December 2010 indicated a decline in density (80-93%). This decline was characterized by a decrease in benthic foraminiferal density and benthic foraminiferal accumulation rate (BFAR) …


Lichen Monitoring Delineates Biodiversity On A Great Barrier Reef Coral Cay, Paul C. Rogers, Roderick W. Rogers, Anne Hedrich, Patrick T. Moss Jan 2015

Lichen Monitoring Delineates Biodiversity On A Great Barrier Reef Coral Cay, Paul C. Rogers, Roderick W. Rogers, Anne Hedrich, Patrick T. Moss

Wildland Resources Faculty Publications

Coral islands around the world are threatened by changing climates. Rising seas, drought, and increased tropical storms are already impacting island ecosystems. We aim to better understand lichen community ecology of coral island forests. We used an epiphytic lichen community survey to gauge Pisonia (Pisonia grandis R.BR.), which dominates forest conditions on Heron Island, Australia. Nine survey plots were sampled for lichen species presence and abundance, all tree diameters and species, GPS location, distance to forest-beach edge, and dominant forest type. Results found only six unique lichens and two lichen associates. A Multi-Response Permutation Procedures (MRPP) test found statistically distinct …


Ecologically And Socially Sustainable Livestock Development In Marginal Areas, Ilse Köhler-Rollefson Jan 2015

Ecologically And Socially Sustainable Livestock Development In Marginal Areas, Ilse Köhler-Rollefson

IGC Proceedings (1977-2023)

“Marginal areas” are perceived as difficult and unproductive landscapes, always under the threat of drought, desertification and poverty. Yet, both dryland and high altitude marginal areas have an extraordinary output of livestock products; in the efficiency of producing human-edible protein they far surpass more fertile areas. This productivity under adverse climatic conditions rests on sophisticated strategies and social institutions developed by pastoral communities to deal with variability in the availability of resources. It depends on the use of animal genetic resources that are adapted to make best use of local vegetation and can cope with seasonal variations in availability. Livestock …


Evolution, Systematics & Geographic Parthenogenesis Of Ilyodromus (Crustacea, Ostracoda), Rylan James Shearn Jan 2015

Evolution, Systematics & Geographic Parthenogenesis Of Ilyodromus (Crustacea, Ostracoda), Rylan James Shearn

Theses

Most multicellular organisms reproduce sexually at some point in their life cycle. This is paradoxical because being asexual is theoretically far more advantageous. Asexual organisms do not need to find and court new mates, they reproduce at a faster rate, and with no males, all members of the population contribute toward population growth rate. With over 20, often mutually exclusive hypotheses, this paradox resists a synthesised explanation, and continues to represent one of the largest gaps in our understanding of fundamental evolutionary theory. Clearly, more real world studies are required that document the selective mechanisms underlying differences in evolutionary fitness …


Assessment Of Species Diversity And State Of Stipa Tenacissima Steppes, Wahida Ghiloufi, Jose Luis Quero Perez, Miguel Garcia Gomez, Mohamed Chaieb Jan 2015

Assessment Of Species Diversity And State Of Stipa Tenacissima Steppes, Wahida Ghiloufi, Jose Luis Quero Perez, Miguel Garcia Gomez, Mohamed Chaieb

Turkish Journal of Botany

North African steppes are subjected to extreme degradation resulting in the reduction of their surface, genetic erosion of resources, and decrease in biodiversity. Stipa tenacissima steppes, which constitute one of the most representative vegetation types in the driest areas of the Mediterranean basin, are continuously degrading. With the aim of contributing to a better knowledge of the floristic composition and diagnosing the state of degradation of these steppes, we conducted a phytoecological analysis of 10 S. tenacissima sites in Tunisia. Floristic inventory compiled a systematic list of 46 vascular plant species belonging to 43 genera and 26 families. Species richness …


Expanding The Understanding Of A Forest Ectomycorrhizal Community By Combining Root Tips And Fruiting Bodies: A Case Study Of Tuber Magnatum Stands, Giorgio Lalli, Marco Leonardi, Marilena Oddis, Giovanni Pacioni, Elena Salerni, Mirco Iotti, Alessandra Zambonelli Jan 2015

Expanding The Understanding Of A Forest Ectomycorrhizal Community By Combining Root Tips And Fruiting Bodies: A Case Study Of Tuber Magnatum Stands, Giorgio Lalli, Marco Leonardi, Marilena Oddis, Giovanni Pacioni, Elena Salerni, Mirco Iotti, Alessandra Zambonelli

Turkish Journal of Botany

A survey of both ectomycorrhizal (ECM) root tips and fruiting bodies of ECM fungi was carried out during a four-year period (2009-2012) in two similar forest stands in central Italy, previously investigated in detail being habitats of the Italian white truffle Tuber magnatum Pico. This research is one of the few conducted in mixed forest stands and, for the first time, it took into account the cryptic fungi (corticiaceous, hypogeous, and sclerotia). This survey led to an exhaustive description of the ECM community by integrating all the 197 taxa recorded (147 species as fruiting bodies, 65 as ectomycorrhizas, and 15 …


Striking The Balance: Challenges And Perspectives For The Protected Areas Network In Northeastern European Russia, Svetlana V. Degteva, Vasily I. Ponomarev, Sasha W. Eisenman, Vyacheslav Dushenkov Jan 2015

Striking The Balance: Challenges And Perspectives For The Protected Areas Network In Northeastern European Russia, Svetlana V. Degteva, Vasily I. Ponomarev, Sasha W. Eisenman, Vyacheslav Dushenkov

Publications and Research

Increasing anthropogenic pressure on the largest remaining tracts of old-growth boreal forest in Europe necessitates additional conservation of ecosystems and biodiversity in northeastern European Russia. In a regional network comprising 8 % of the Nenets Autonomous District and 13.5 % of the Komi Republic, 248 areas have varying protected statuses as state nature reserves (zapovedniks), national parks, reserves/sanctuaries (zakazniks), or natural monuments. Due to increased natural resource extraction in this relatively pristine area, designation of additional protected areas is critical for the protection of key ecological sites. The history of ecological preservation in these regions is herein described, and recent …


Six New Genus Records For Turkish Pezizales From Gaziantep Province, Abdullah Kaya, Yasi̇n Uzun Jan 2015

Six New Genus Records For Turkish Pezizales From Gaziantep Province, Abdullah Kaya, Yasi̇n Uzun

Turkish Journal of Botany

The genera Hypotarzetta Donadini, Pseudombrophila Boud., Pustularia Bonord., Pyronema Carus, Tricharina Eckblad (Pyronemataceae Corda), and Thecotheus Boud. (Ascobolaceae Boud. Ex Sacc.) are recorded from Turkey for the first time based on the collections of Hypotarzetta insignis (Berthet and Riousset) Donadini, Pseudombrophila merdaria (Fr.) Brumm., Pustularia patavina (Cooke and Sacc.) Boud., Pyronema omphalodes (Bull.: Fr.) Fuckel, Tricharina gilva (Boud. Ex Cooke) Eckblad, and Thecotheus pelletieri (P. Crouan and H. Crouan) Boud., respectively. Short descriptions and photographs of the taxa related to their macro- and micromorphologies are provided.


Reasoning Over Taxonomic Change: Exploring Alignments For The Perelleschus Use Case, Nico M. Franz, Mingmin Chen, Shizhuo Yu, Parisa Kianmajd, Shaun Bowers, Bertram Ludäscher Jan 2015

Reasoning Over Taxonomic Change: Exploring Alignments For The Perelleschus Use Case, Nico M. Franz, Mingmin Chen, Shizhuo Yu, Parisa Kianmajd, Shaun Bowers, Bertram Ludäscher

Computer Science Faculty Scholarship

Classifications and phylogenetic inferences of organismal groups change in light of new insights. Over time these changes can result in an imperfect tracking of taxonomic perspectives through the re-/use of Code-compliant or informal names. To mitigate these limitations, we introduce a novel approach for aligning taxonomies through the interaction of human experts and logic reasoners. We explore the performance of this approach with the Perelleschus use case of Franz & Cardona-Duque (2013). The use case includes six taxonomies published from 1936 to 2013, 54 taxonomic concepts (i.e., circumscriptions of names individuated according to their respective source publications), and 75 expert-asserted …


Contributions To The Macrofungal Diversity Of Atatürk Dam Lake Basin, Abdullah Kaya Jan 2015

Contributions To The Macrofungal Diversity Of Atatürk Dam Lake Basin, Abdullah Kaya

Turkish Journal of Botany

This study was carried out on macrofungi samples collected from Atatürk Dam Lake basin, especially from the southern coasts, within the boundaries of Şanlıurfa province between 2003 and 2013. A total of 122 taxa belonging to 38 families were identified. Six of them are new for the mycobiota of Turkey. Sowerbyella rhenana (Fuckel) J. Moravec is new at the genus level, while Peziza pseudoviolacea Donadini, Peziza ripensis E.C. Hansen, Cheilymenia theleboloides (Alb. & Schwein.) Boud., Galeropsis desertorum Velen. & Dvorak, and Tulostoma melanocyclum Bres. are new at species level.


New Records For Turkey And Contributions To The Macrofungal Diversity Of Isparta Province, Hali̇l Güngör, Mehmet Hali̇l Solak, Hakan Alli, Mustafa Işiloğlu, Erbi̇l Kalmiş Jan 2015

New Records For Turkey And Contributions To The Macrofungal Diversity Of Isparta Province, Hali̇l Güngör, Mehmet Hali̇l Solak, Hakan Alli, Mustafa Işiloğlu, Erbi̇l Kalmiş

Turkish Journal of Botany

This study was conducted on specimens of macrofungi collected from Isparta Province between 2005 and 2008; in addition, Trichophaea woolhopeia (Cooke and W. Phillips) Boud. İs given as a new record from Muğla Province. After fieldwork and laboratory studies, 129 taxa belonging to 36 families and 2 divisions were identified from Isparta Province. Five of them, Cortinarius olidus J.E. Lange, Cystoderma jasonis (Cooke and Massee) Harmaja, Echinoderma echinaceum (J.E. Lange) Bon, Hebeloma gigaspermum Gröger and Zschiesch., and Psathyrella canoceps (Kauffman) A.H. Sm., are new records for Turkey.


Taxonomic Studies On Some New Fungal Records From Trabzon, Turkey, Ertuğrul Sesli̇, Pierre-Arthur Moreau Jan 2015

Taxonomic Studies On Some New Fungal Records From Trabzon, Turkey, Ertuğrul Sesli̇, Pierre-Arthur Moreau

Turkish Journal of Botany

Basidiomes of Alnicola subconspersa (Kühner ex P.D. Orton) Bon, Amanita pachyvolvata (Bon) Krieglst., Cortinarius azureus Fr., Cortinarius vernus H. Lindstr. And Melot, Melanogaster variegatus (Vittad.) Tul. And C. Tul., Paxillus ammoniavirescens Contu and Dessì, and Paxillus cuprinus P. Jargeat, H. Gryta, J.P. Chaumeton and A. Vizzini were reported for the first time for the Turkish mycota from Trabzon. Plant species, possible mycorrhizal relationships, and superficial morphologic structures were noted and photos were taken in situ in the collection area. The samples were brought to the laboratory and dried for future microscopic studies. Basidiospores, cystidia, basidia, marginal cells, and pileipellis of …


Ecological Drivers And Habitat Associations Of Estuarine Bivalves, C. Seabird Mckeon, Björn G. Tunberg, Cora A. Johnston, Daniel J. Barshis Jan 2015

Ecological Drivers And Habitat Associations Of Estuarine Bivalves, C. Seabird Mckeon, Björn G. Tunberg, Cora A. Johnston, Daniel J. Barshis

Biological Sciences Faculty Publications

Community composition of the infaunal bivalve fauna of the St. Lucie Estuary and southern Indian River Lagoon, eastern Florida was sampled quarterly for 10 years as part of a long-term benthic monitoring program. A total of 38,514 bivalves of 137 taxa were collected and identified. We utilized this data, along with sediment samples and environmental measurements gathered concurrently, to assess the community composition, distribution, and ecological drivers of the infaunal bivalves of this estuary system. Salinity had the strongest influence on bivalve assemblage across the 15 sites, superseding the influences of sediment type, water turbidity, temperature and other environmental parameters. …


Emergent Non-Consumptive Predator Effects Alter Habitat Colonization By Dipteran Prey, Ethan G. Staats Jan 2015

Emergent Non-Consumptive Predator Effects Alter Habitat Colonization By Dipteran Prey, Ethan G. Staats

Theses and Dissertations

When ovipositing, prey organisms avoid habitat patches containing predator cues because predators consume, and negatively affect the fitness of their prey. Richness of predator species often enhances the strength of consumptive predator effects, but little is known about how multiple predators combined affect prey non-consumptively. We quantified dipteran colonization in aquatic mesocosms in response to varied predator richness. Multiple predator species combined reduced oviposition by Culex mosquitoes, chironomid midges, and the general colonizing dipteran community more than predicted by the effects of the independent predator species. Previous research which quantifies effects of multiple predators on prey as prey abundance, but …


Human Appropriation Of Net Primary Production (Hanpp) In An Agriculturally-Dominated Watershed, Southeastern Usa, C. Brannon Andersen, R. Kyle Donovan, John Quinn Jan 2015

Human Appropriation Of Net Primary Production (Hanpp) In An Agriculturally-Dominated Watershed, Southeastern Usa, C. Brannon Andersen, R. Kyle Donovan, John Quinn

Biology Publications

Human appropriation of net primary production (HANPP) quantifies alteration of the biosphere caused by land use change and biomass harvest. In global and regional scale assessments, the majority of HANPP is associated with agricultural biomass harvest. We adapted these methods to the watershed scale and calculated land cover change and HANPP in an agricultural watershed in 1968 and 2011. Between 1968 and 2011, forest cover remained near 50% of the watershed, but row crop decreased from 26% to 0.4%, pasture increased from 19% to 32%, and residential area increased from 2% to 10%. Total HANPP decreased from 35% of potential …


Systematics Of The African River Frog Genus Amietia (Anura: Pyxicephalidae) From Eastern Democratic Republic Of The Congo, Thornton Robert Larson Jan 2015

Systematics Of The African River Frog Genus Amietia (Anura: Pyxicephalidae) From Eastern Democratic Republic Of The Congo, Thornton Robert Larson

Open Access Theses & Dissertations

The African river frog genus Amietia is found near rivers and other lentic water sources throughout central, eastern and southern Africa. Because the genus includes multiple morphologically conservative species, taxonomic studies of river frogs have been limited. We sampled 49 individuals of Amietia from multiple localities in and near the Albertine Rift (AR) of Burundi, Democratic Republic of the Congo and Uganda. We utilized single-gene (16S) and concatenated (12S, 16S, cytochrome b and RAG1) gene-tree analyses and coalescent species-tree analyses to construct phylogenetic trees. Two divergence dating approaches were used in BEAST, including secondary calibration points with 12S, 16S and …


The Relationship Between Riparian Zone Width And Floristic Quality In Shenandoah County, Virginia, Jamie D. Smith Dec 2014

The Relationship Between Riparian Zone Width And Floristic Quality In Shenandoah County, Virginia, Jamie D. Smith

Masters Theses, 2010-2019

Riparian zones harbor an above average plant biodiversity. This biodiversity is threatened by invasive species and increasing human disturbance, the latter of which includes deforestation from agriculture and urban development. In this study, I examine relationship between the width of a forested riparian zone and the vegetation growing there. By using floristic quality assessment as a measure of anthropogenic disturbance, one can determine if wider riparian zones foster exclusion of non-native species while providing higher quality habitats for native plants. A randomized block design was used with three forested riparian treatments: deforested, moderately forested (woody vegetationstream), and extensively forested (woody …


Predictive Modeling Of Floral Species Richness In Michigan Prairie Fen Communities, Nichole R. Mason Dec 2014

Predictive Modeling Of Floral Species Richness In Michigan Prairie Fen Communities, Nichole R. Mason

Masters Theses

Prairie fens contain high levels of floral biodiversity, including 19 state threatened or endangered plant species, and are classified as rare and vulnerable communities by the Michigan Natural Features Inventory. The objective of this thesis was to develop multiple-regression (MR) models that reliably predict total, native, and invasive floral species richness for use by conservation organizations. Floral biodiversity surveys were conducted in eight southern Michigan prairie fens during the 2012 growing season. Simple linear regressions between fen size and biodiversity were used to optimize sampling strategy and effort (i.e., number of transects and plots per transect) in surveys conducted in …


Indigenous Tree Uses, Use-Values And Impact Of Human Population On Forest Size, Structure And Species Richness In Uluguru, Morogoro, Tanzania, David Sylvester Kacholi Nov 2014

Indigenous Tree Uses, Use-Values And Impact Of Human Population On Forest Size, Structure And Species Richness In Uluguru, Morogoro, Tanzania, David Sylvester Kacholi

Tanzania Journal of Science

This study assessed tree uses and use-values as well as impacts of human population on the forest size, species richness, basal area and stand density in the Uluguru forests in Morogoro Region. Interview with locals on the tree uses were done using structured questionnaires and use-value analysis techniques were used in analysing data. Trees with a diameter at breast height ≥ 10 cm measured at 1.3 m above the ground were sampled from a total of 114 plots of 20 m x 20 m (0.04 ha) from the seven forests. A total of 42 species belonging to 20 families were …


Biodiversity Assessment And Its Effect On The Environment Of Shakarparian Forest, Inayat Ullah Malik, Abul Hasan Faiz, Fakhar -I- Abbas Nov 2014

Biodiversity Assessment And Its Effect On The Environment Of Shakarparian Forest, Inayat Ullah Malik, Abul Hasan Faiz, Fakhar -I- Abbas

Journal of Bioresource Management

Shakarparian is known for its scenic beauty and wilderness and has a significant recreational value. It is a part of Margalla Hills National Park (MHNP), Islamabad and can be a good recourse to conduct various environmental studies. This study was aimed to explore the overall biodiversity of Shakarparian forest in terms of flora and its associated fauna. Phytosociological survey was carried out in order to identify the existing plant communities. The plant associations were then correlated to the existing fauna of the area. The results will provide the baseline data to support further studies on biodiversity analysis of ecologically rich …


Effect Of Grain, Region, And Human Influence On Higher Taxonomic Surrogacy, Frances Owen Nov 2014

Effect Of Grain, Region, And Human Influence On Higher Taxonomic Surrogacy, Frances Owen

Master's Theses or Doctor of Nursing Practice

Surrogacy is a common tool within conservation and can be useful when scientists lack detailed knowledge of a system. Higher taxonomic surrogacy is appealing because it can save time and money. However, this technique might vary in effectiveness depending on the taxonomic level, spatial grain, region, and impact by humans. In this thesis I addressed some of the common concerns with higher taxonomic surrogacy using Breeding Bird Atlas data from six states (Colorado, Florida, Michigan, New York, Pennsylvania, and Washington). I compared the coefficients (slopes) of my models rather than the R2 values relied on by other higher taxonomic surrogacy …


Height And Clonality Traits Determine Plant Community Responses To Fertilization, Timothy L. Dickson, Gary G. Mittelbach, Heather L. Reynolds, Katherine L. Gross Sep 2014

Height And Clonality Traits Determine Plant Community Responses To Fertilization, Timothy L. Dickson, Gary G. Mittelbach, Heather L. Reynolds, Katherine L. Gross

Biology Faculty Publications

Fertilization via agricultural inputs and nutrient deposition is one of the major threats to global terrestrial plant richness, yet we still do not fully understand the mechanisms by which fertilization decreases plant richness. Tall clonal species have recently been proposed to cause declines in plant species richness by increasing in abundance in response to fertilization and competing strongly with other species. We tested this hypothesis in a fertilization experiment in a low productivity grassland by using a novel experimental manipulation of the presence vs. absence of clonal species and by examining the role of height within these treatments. We found …


The Significance Of Micro-Prairie Reconstruction In Urban Environments, Bruno Borsari, Neal Mundahl, Malcom F. Vidrine, Marc Pastorek Aug 2014

The Significance Of Micro-Prairie Reconstruction In Urban Environments, Bruno Borsari, Neal Mundahl, Malcom F. Vidrine, Marc Pastorek

The Prairie Naturalist

An aggressive urban sprawl during the last half century has not only contributed to habitat disturbance and extirpation, as well as a loss of knowledge and appreciation for biodiversity. Across the United States, prairie reconstruction has been a very effective approach for developing sustainable landscape designs in city parks and other open spaces. The purpose of this work is to focus on restoration and reconstruction of selected micro-prairies as a vehicle for enhanced place-based education and to partially remediate the consequences of global climate change and loss of pollinators. From the coastal prairies of southwestern Louisiana, to the eastern edge …


Population And Demographic Structure Of Ixodes Scapularis Say In The Eastern United States., Joyce M. Sakamoto, Jerome Goddard, Jason L. Rasgon Jul 2014

Population And Demographic Structure Of Ixodes Scapularis Say In The Eastern United States., Joyce M. Sakamoto, Jerome Goddard, Jason L. Rasgon

CALS Publications

INTRODUCTION: The most significant vector of tick-borne pathogens in the United States is Ixodes scapularis Say (the blacklegged tick). Previous studies have identified significant genetic, behavioral and morphological differences between northern vs. southern populations of this tick. Because tick-borne pathogens are dependent on their vectors for transmission, a baseline understanding of the vector population structure is crucial to determining the risks and epidemiology of pathogen transmission. METHODS: We investigated population genetic variation of I. scapularis populations in the eastern United States using a multilocus approach. We sequenced and analyzed the mitochondrial COI and 16S genes and three nuclear genes (serpin2, …