Life Sciences Commons^™

Examining The Presence And Effects Of Coherence And Fragmentation In The Gulf Of Maine Fishery Management Network, Derek A. Katznelson, Antonia Sohns, Dongkyu Kim, Evelyn Roozee, William Donner, Andrew M. Song, Jasper R. De Vries, Owen Temby, Gordon M. Hickey

School of Earth, Environmental, & Marine Sciences Faculty Publications

Natural resource management networks cohere due to mutual dependencies and fragment, in part, due to the perceived risks of interaction. However, research on these networks has tended to accept coherence a priori rather than problematizing dependence, and few studies exist on interorganizational risk perception. This article presents the results of a study operationalizing these concepts and measuring the distribution of three types of dependence (capital, legitimacy, and regulatory) and two types of perceived risk (performance and sanction) among nearly fifty stakeholder groups and organizations participating in the management of fisheries in the binational Gulf of Maine. The analysis reveals an …

Disposal Of Nanoplastics By The Brain: Plastic Persistence And Upregulation Of A Putative Plastic-Degrading Enzyme After Exposure To Polystyrene-Infused Food, Callie C. Mauersberg

College of Graduate Studies: Theses & Dissertations

Plastic is a ubiquitous material used in many domestic and commercial applications. Widespread use of plastic has led to environmental accumulation of plastic waste, and microplastics have inundated human food and water sources. Once consumed, it is well established that microplastics translocate from the gut to other tissues, including the brain, via the circulatory system. However, it is unknown if nanoplastics persist permanently in the brain. Additionally, it is not known if microplastics can be enzymatically degraded by phagocytic cells in the CNS, such as microglia and astrocytes. Alkane monooxygenase-homolog 7 (Alkbh7) is a mitochondrial enzyme that may …

Bugs In The Flux: Links Between Arthropod Diversity And Spatial Variation Of Soil Respiration In A Temperate Forest, Erin-Darby H. Mcclain

Theses and Dissertations

Soil respiration (Rs) is the largest terrestrial flux of carbon (C) to the atmosphere, with heterotrophic contributions to Rs varying spatially and temporally. While microbes are the primary and most thoroughly studied source of soil heterotrophic respiration (Rh), contributions from higher trophic organisms, including arthropods, are rarely quantified and poorly understood. Arthropod abundance and diversity correspond with variation in soil microclimate, which is influenced by site factors including canopy structure, site productivity, and disturbance. However, the extent to which these site factors influence arthropod abundance and diversity, and consequently, spatial variation in Rs is not known. The objective of our …

Mdma Enantiomers: An Exploration Into 5-Ht2ar Necessity In Non-Hallucinogen Induced Frontal Cortex Plasticity, Maya C. Gaines-Smith

Theses and Dissertations

Entactogen 3,4-methylenedioxymethamphetamine (MDMA) has gained increasing attention as a potential psychotherapeutic, particularly for psychiatric disorders that have proven to be resistant to traditional treatments. Despite its growing popularity, the complete neurobiological mechanism of MDMA enantiomers, as well as the role of sex in these mechanisms, remains to be fully elucidated. Current ongoing research implicates agonism of the serotonin (5-HT) 2A receptor (5-HT_2AR) and neuroplastic growth in the success of other psychoactive and hallucinogenic pharmacotherapeutics, highlighting the importance of understanding the role that the 5-HT_2AR plays in the therapeutic mechanism of action of MDMA enantiomers. The culmination …

Scopolamine-Induced Modulation Of Serotonin And Dopamine Transporters Activity: Behavioral And Molecular Insights Into Rapid Antidepressant Action, Deepak Karunakaran

Theses and Dissertations

Major depressive disorder (MDD) affects over 350 million individuals worldwide and is characterized by profound dysregulation of serotonin (5-HT) and dopamine (DA) systems that govern mood, reward processing, and motivation. The serotonin transporter (SERT) and dopamine transporter (DAT), both dynamically regulated through phosphorylation, serve as critical determinants of synaptic monoamine signaling. Despite decades of therapeutic development, current antidepressants require 4-6 weeks to achieve efficacy, and approximately one-third to half of patients develop treatment-resistant depression. The emergence of rapid-acting antidepressants like ketamine represents a paradigmatic shift, demonstrating symptom relief within hours; however, ketamine's therapeutic potential remains constrained by abuse liability, dissociative …

Exploring The Role Of Host Immune Responses And Bacterial Sensory Pathways In The Development Of Treponema Denticola-Mediated Periodontal Disease, Annie N. Hinson

Theses and Dissertations

Periodontitis is a chronic inflammatory disease driven by dysbiotic microbial communities and maladaptive host responses. Treponema denticola, a spirochete pathobiont, is strongly associated with disease severity. However, the molecular mechanisms underlying its interaction with host tissues and regulation of virulence remain incompletely understood. This work examines both the epithelial immune responses and bacterial transduction systems that shape T. denticola pathogenesis. Transcriptomic analysis of gingival keratinocytes revealed IL-36γ as the most highly induced cytokine following infection with T. denticola. Functional studies demonstrated that IL-36γ induction occurs in a dose- and time-dependent manner through TLR2/6 signaling, requiring the NF-κB, PI3K/Akt, and …

Functional Analysis Of Ligand Binding Domain 2 Of Outer Surface Protein C Of Borreliella Burgdorferi, Gavin Z. Chambers

Theses and Dissertations

Lyme disease, caused by the spirochete Borreliella burgdorferi, is the most common vector-borne infection in North America. A critical determinant of early mammalian infection is outer surface protein C (OspC), a highly variable lipoprotein that is indispensable for spirochete survival but whose precise function remains unresolved. OspC has been proposed to mediate diverse roles, including complement evasion, adhesion, tissue dissemination, and antiphagocytic activity, supporting the view that it is a multifunctional virulence factor. Structural studies have identified two putative ligand-binding domains (LBD1 and LBD2), with LBD2 forming a solvent-exposed crown at the membrane-distal end of the OspC dimer.

To …

Monograph Available: Urban Coyotes As A Source Of Conflict With Humans: An Evaluation Of Common Management Practices

Human–Wildlife Interactions

This is an announcement about the published monograph titled "Urban Coyotes as a Source of Conflict with Humans: An Evaluation of Common Management Practices." This publication, part of the HWI Monograph Series, is online and open access.

Evaluating Lethal Coyote Management In The Chicago Metropolitan Area Using A Conflict Recurrence Metric, Jeffrey T. Schultz, Scott Beckerman, Robert Erickson, Danielle Montgomery, Stewart W. Breck

Human–Wildlife Interactions

Human–coyote (Canis latrans) conflict in urban environments is prevalent in cities throughout the United States. Urban areas commonly use nonlethal techniques to mitigate coyote-caused conflicts but will also incorporate selective removal of individual coyotes when conflicts persist. However, little research has evaluated these management strategies. This study analyzed coyote removal efforts conducted in the Chicago Metropolitan Area from 2010 to 2020. To evaluate the management actions, we used “time without incidence”—the time elapsing from an initial conflict until either a subsequent conflict occurred in the same area, or when the data collection period ended—as an index of effectiveness. …

Use Of Scat Dna To Estimate Coyote Abundance On A Newly Colonized Barrier Island, Sonia M. Hernandez, Michael J. Yabsley, Sarah C. Webster, Elizabeth M. Kierepka, Rochelle R. Beasley, Carly L. Landa, Heather W. Barron, Kelly Sloan, Holly Milbrandt, James C. Beasley

Human–Wildlife Interactions

Coyotes (Canis latrans) have expanded in mainland eastern North America and are known to have successfully colonized numerous islands. However, there are scarce data on the densities of coyotes in these ecosystems, in which coyotes can have substantive negative impacts. Coyotes first colonized Sanibel Island, a barrier island off the western coast of Florida, USA, in 2011, and their presence has been linked to declines in several sensitive species. However, the population size of coyotes has only been estimated from anecdotal reports and camera traps. Our goal was to estimate the size of the coyote population on Sanibel …

Cost-Effective Strategies For Feral Swine Control: Exploring Trapping Equipment Cooperatives, Phil Kenkel, Riza Radmehr, Rodney Holcomb, Mckenzie Boyce

Human–Wildlife Interactions

Feral swine (Sus scrofa) in the United States have become a growing concern, with a population of ≥6 million and causing annual damages of ≥$1.5 billion USD. Because of their high reproductive capacity, effective control methods are crucial to reducing or slowing their population growth. While remotely monitored and triggered traps have proven to be an effective control strategy, the cost of sophisticated trapping equipment, which can cost ≥$7,000 USD, is often cost prohibitive for many landowners. Despite the pressing need to address the challenge of making effective feral swine control methods more affordable, there are few studies …

Factors Influencing The Discovery And Use Of Carrion By Vertebrate Scavengers From Human-Induced Mass-Mortality Events, Samantha J. Leivers, Michael J. Bodenchuk, Tyler A. Campbell, John M. Tomeček

Human–Wildlife Interactions

Scavengers play critical roles in ecosystem health and stability, and both biotic and abiotic factors can influence scavenger guild dynamics. Carrion is often limited both temporally and spatially on the landscape, but mass mortality events (MMEs)—in which there is an influx of carrion biomass on the landscape—may result in different scavenger community dynamics compared to when carrion is scarcely distributed. In this study, we investigated factors affecting the discovery and use of carrion by a natural, unharrassed scavenger guild during wild pig (Sus scrofa) MMEs conducted at East Foundation’s San Antonio Viejo Ranch in South Texas, USA. We …

Bird Strikes During Climb And Approach: A Need For Innovative Management Strategies, Richard A. Dolbeer, Michael J. Begier

Human–Wildlife Interactions

Wildlife Hazard Management Plans at civil airports in the United States cannot directly address threats posed by birds moving through aircraft climb and approach paths unrelated to nearby bird-attractant habitats such as landfills. As an iconic example, an Airbus 320 departing LaGuardia Airport (New York, USA) on January 15, 2009, struck a flock of migratory Canada geese (Branta canadensis) 8 km out at 884 m above ground level (AGL) that resulted in a water landing now known as the “Miracle on the Hudson.” We documented 1,841 and 458 strikes from 2009 to 2023 involving large (≥1.8 kg) and …

Human–Wildlife Interactions Monograph Series

Human–Wildlife Interactions

The Human–Wildlife Interactions (HWI) Monograph Series is published in both print and online formats through the Jack H. Berryman Institute at Utah State University. See the current and forthcoming publications in this series.

Refine Fuels Treatments In The Wildland–Urban Interface With Wildlife In Mind, Miles Becker, Catrin M. Edgeley, David Stoner

Human–Wildlife Interactions

Conserving urban tree and shrub cover provides many benefits for wildlife and people, yet often becomes a lower priority than fuels treatments to mitigate fire risk in the wildland–urban interface (WUI). We support the principle that considering multiple objectives on privately owned property is valuable and can be achieved. Data sharing and collaboration between wildfire experts and wildlife biologists could improve the quality and extent of managing both animals and fire. Furthermore, the adoption of statewide policy and municipal regulations for preventing wildfires in the WUI provides an opportunity to incorporate ecological functions in the same directives for a balanced …

Using Advanced Machine Learning To Evaluate The Spatial And Temporal Patterns Of Human–Bear Interactions In Maryland, Usa, Katherine A. Kurth, Jonathan K. Trudeau

Human–Wildlife Interactions

American black bears (Ursus americanus) are highly adaptable to human-dominated areas, which can lead to interactions with humans. Managing these interactions is a priority for many wildlife agencies in North America. Climate-induced shortages in natural food can exacerbate human–bear interactions, as bears are driven to seek alternative food sources in human-dominated areas. However, few studies have investigated the impact of climate or weather on the frequency and severity of human–bear interactions. In Maryland, USA, no research has examined the anthropogenic or environmental factors contributing to human–bear interactions, even though reported interactions have consistently increased since the 1990s. Our …

Examining Exercise Self- Efficacy And Functional Mobility In Urban Law Enforcement Officers, Margo F. Jenkins

College of Graduate Studies: Theses & Dissertations

BACKGROUND: Law enforcement officers perform various physically demanding tasks, but much of their daily activities are sedentary or light intensity. Quality movement patterns are vital for fitness, reducing the risk of injuries, and contributing to motivation for physical activity. PURPOSE: This study examined the relationship between exercise self-efficacy (ESES) and functional mobility (FMS) among law enforcement officers. METHODS: 55 officers participated, with exercise self-efficacy measured using the ESES scale and movement patterns assessed with the Functional Movement Screening (FMS). Correlational analysis and linear regression were used to explore the relationships between FMS and ESES, years of service (YoS) and FMS, …

Epigenetic Potential Remains Stable Over 100 Years After Introduction, Danielle Dawkins

College of Graduate Studies: Theses & Dissertations

Introduced species provide important insights into organismal behavioral responses. Epigenetic mechanisms are one of the various ways in which behaviors can be modified, particularly through DNA methylation. Through such mechanisms, phenotypic changes can occur in response to environmental changes, allowing an organism to be more plastic. Epigenetic potential (EP) represents the capacity for an organism to be epigenetically modified, and can be measured by counting CpG motifs; cytosine adjacent to guanine within a DNA sequence. Phenotypic plasticity as it relates to EP has been studied extensively in the house sparrow (Passer domesticus), a globally introduced songbird. It is …

Bio-Inspired Airfoil Design Based On The Aerodynamic Analysis Of A Bird Feather Microstructure, Jack C. Ihm

College of Graduate Studies: Theses & Dissertations

This study investigates the aerodynamic effects of a bio-inspired airfoil design based on the microstructure of a secondary feather from a female wood duck. The research hypothesized that incorporating barbs and barbules into an airfoil design would modify boundary layer behavior by introducing localized flow disturbances. To test this, a bio-inspired airfoil was developed by integrating the microstructure into a NACA 0012 airfoil and analyzed using computational fluid dynamics (CFD) simulations at angles of attack of 0°, 5°, 10°, and 15°. The results showed that the bio-inspired airfoil influenced boundary layer behavior, producing localized flow disturbances near x/c = 0.7 …

Variations Of Hex Bar Deadlifts On Post-Activation Performance Enhancement In Collegiate Baseball Athletes, Samuel Sanders

College of Graduate Studies: Theses & Dissertations

Single-session resistance priming protocols are used by strength and conditioning coaches to acutely improve neuromuscular mechanisms that are beneficial to athletic performance. This study aimed to examine if a concentric-only hex bar deadlift (CHBDL) would produce a similar post-activation performance enhancement (PAPE) effect as a full-range-of-motion hex bar deadlift (THBDL) and mitigate perceived measures of fatigue and soreness in collegiate athletes. 19 NCAA Division I baseball athletes completed the study. A repeated measures design with randomized assignment and counterbalanced order was utilized. Over two weeks, the CHBDL and THBDL were added into a typical priming protocol used by the team’s …

Survey And Identification Of Entomopathogenic Fungi In Millipede Species In Coastal Georgia, Kristin L. Campbell Bailey

College of Graduate Studies: Theses & Dissertations

Entomopathogenic fungi are well-known, species-specific pathogens of a wide diversity of insects that infect, manipulate, and kill their insect hosts to complete their life cycle. Recently in Savannah, Georgia, millipedes belonging to the genus Eurymerodesmus were observed exhibiting pre-death climbing behaviors associated with pathogenic fungal infection. Dying millipedes summited vegetation and subsequently died in elevated positions along edge habitat transitioning a recreational field and forest. Upon inspection, fungal structures found emerging from dead millipedes anatomically resembled Arthrophaga myriapodina, which is the first documented entomophthoralean fungus to infect millipedes. The goal of this research was to obtain species-level identification of the …

Evaluating Impacts Of Footpaths On Resiliency Of Restored Dunes At Tybee Island, Georgia, Skyler J. Fox

College of Graduate Studies: Theses & Dissertations

Sand dunes provide critical ecosystem services including storm protection by acting as natural barriers. However, these systems are threatened by human disturbance, particularly pedestrian traffic occurring at footpaths that damages dune vegetation. Vegetation is essential to dune growth and stability, as dune plants trap and bind sand. When trampled, dunes become more vulnerable to erosion and less effective at providing coastal protection. On Tybee Island, Georgia—a popular tourist destination—a vegetated dune was constructed in 2020 to enhance storm protection. This study assessed how footpaths impact dune resiliency and aimed to inform management strategies. I evaluated: (1) how characteristics of vegetation, …

Assessment And Health Benefit Of Vitamin C Using A549 Cell, Yetunde Adepoju

College of Graduate Studies: Theses & Dissertations

Vitamin C (ascorbic acid) is a vital micronutrient recognized for its antioxidant capacity and essential bodily functions, such as collagen formation, neurotransmitter activity, and regulation of the immune system. This study explores how vitamin C can protect and potentially heal cells under oxidative stress and inflammation, using A549 cells, a human lung epithelial cell line, as the model system. The cells were exposed to varying concentrations of vitamin C dissolved in water, DMSO, and 5% DMSO. To assess the outcome, cell viability was measured with an MTT assay. In addition, the expression of key genes related to oxidative stress and …

The Bacteriostatic, Regenerative, And Immunomodulatory Properties Of Extracellular Matrix Particles For Lung Injury, Keera P. Rhoads

Theses and Dissertations

Acute respiratory distress syndrome (ARDS) is a prevalent, life-threatening lung condition, affecting nearly 200,000 Americans annually, with a 40% international mortality rate. There is no cure for ARDS, and current pharmacological treatments have limited effectiveness. Symptoms can be mitigated with mechanical ventilation, though this often leads to ventilator-induced lung injuries (VILI) and puts critically ill patients at risk of infections, including ventilator-associated pneumonia (VAP). A promising therapeutic is the extracellular matrix (ECM), a complex network of structural proteins and bioactive molecules that has been shown to have anti-inflammatory properties and prevent fibrosis. We aim to utilize the regenerative and immunomodulatory …

Enhancing Clinical Trial Matching In Molecular Diagnostics: Using Natural Language Processing And Clustering Approaches In Hematological Malignancies, Gillian Fanning

Theses and Dissertations

Clinical trial matching is a critical component of personalized medicine, particularly in the management of hematologic malignancies. At Virginia Commonwealth University (VCU) Health, the Molecular Diagnostics (MDX) Lab produces somatic variant reports and recommends clinical trials based on the presence of clinically significant mutations. However, the current manual trial recommendation process is time-intensive and lacks scalability.

This study introduces a computational framework to streamline and standardize clinical trial matching using natural language processing (NLP) and unsupervised clustering. Trial brief descriptions were analyzed to extract frequent terms, and trials were grouped based on term similarity using joint dimensionality reduction and clustering. …

Dickkopf1(Dkk1): A Novel Endogenous Ligand To Prime Nlrp3 Inflammasome Via Tlr4, Theingi Aung

Theses and Dissertations

Dickkopf1(DKK1) is a quintessential Wnt antagonist and immunomodulator in various inflammatory diseases. The underlying molecular mechanisms of DKK1-mediated immunomodulation remain elusive. Here, we identified TLR4 as a new receptor for DKK1 to activate NFκΒ pathway-mediated gene expression and pyroptosis via NLRP3 inflammasome in human and mouse macrophages.

DKK1 employed TLR4 to initiate NFκB signaling cascade via MyD88. MyD88-TAK1-NFκΒ pathway activation by DKK1 increased HIF1α, NFκB, and NLRP3 protein expression levels, leading to pyroptosis. Unlike LPS, DKK1 did not induce IRAK4 phosphorylation, while the interaction between MyD88 and IRAK4 was maintained for downstream signaling activation. DKK1 did not induce IRF3 phosphorylation …

Comparative Study Of Single Imputation Techniques For The Prediction Of Missing Dairy Data, Ahmed M. Gad Prof, Ahmed Abdelhakim Ahmed Mr, Eman Manaa Prof, Basant Shafik Dr, Sakr Mostafa Prof

Business Administration

Dairy farm records are a crucial component of effective livestock business management. Record analysis allows a farm’s owner to make informed decisions. Incomplete records are less useful for data analysis, so it's important to handle missing values correctly. This study compares different imputation methods for handling missing values in a dataset of dairy records comprising 997 records collected from 234 cows between 2012 and 2022. The dataset was screened against records with missing values and then deleted, resulting in 858 observations from 200 animals. There were missing values in two variables, with a missing percentage of 13.9%: days in milk …

Helminth Parasites Of Galápagos Mammals: A New Cestode Of The Genus Raillietina From The Endemic Rice Rat Nesoryzomys Swarthi And A Summary Of Parasites From Both Endemic And Invasive Rodents, Scott Lyell Gardner, Emma K. Chesley, Michael C. Friedle, Altangerel Tsogtsaikhan Dursahinhan

Scott L. Gardner Publications

In this first report of endoparasites from endemic land-mammals of the Galápagos Islands, we describe a new species of cestode of the genus Raillietina (Cyclophyllidea: Davaineidae) from a species of Nesoryzomys and summarize the extent of helminth parasitism in both oryzomyine endemics and introduced species of Rattus. Up to the current time, no helminth parasites have been reported from rodents of the Galápagos, and little work has yet been done describing and synthesizing Galápagos parasite diversity. In historical times, several species of autochthonous rodents have occupied the islands including: Nesoryzomys narboroughi Heller 1904, N. fernandinae Hutterer and Hirsch …

Zoysiagrass Tolerance To Selective Herbicides For The Removal Of Bermudagrass And The Distribution Of The Annual Bluegrass Weevil (Listronotus Maculicollis) In Kentucky, Kenneth D. Clayton

Theses and Dissertations--Plant and Soil Sciences

Bermudagrass (Cynodon dactylon) may be a problematic weed within zoysiagrass (Zoysia spp.) swards across its entire range. The objective of this study was to determine the efficacy of the herbicide safener metcamifen + trifloxysulfuron-sodium, in conjunction with fluazifop-P-butyl, at removing bermudagrass from zoysiagrass and how varying levels of treatment affected bermudagrass control and zoysiagrass tolerance. Field studies tested rates of metcamifen + trifloxysulfuron-sodium applied with fluazifop-P-butyl compared to treatments of fluazifop alone and fenoxaprop with triclopyr. All treatments controlled bermudagrass, and treatments with the herbicide safener remained under the 20% injury threshold for zoysiagrass for ≤ to 15 days compared …

Fusarium Head Blight Resistance Genes Impact Agronomic Performance, Flavor, Milling, And Baking Traits In Soft Red Winter Wheat, Joyce Morris

Theses and Dissertations--Plant and Soil Sciences

Fusarium Head Blight (FHB) is an economically devastating disease of wheat (Triticum aestivum L.) causing low yields and poor quality. FHB, caused by Fusarium graminearum, disrupts the grain filling phase and results in bleached spikes and shriveled seeds. Deoxynivalenol (DON) is a mycotoxin produced by the fungal pathogen when it infects the plant; DON is harmful when consumed by humans and causes feed rejection in livestock. Using FHB resistant varieties and timely applications of fungicides is the optimum strategy for management of this disease. However, there has been little research focusing on the impact of FHB resistance genes …