Life Sciences Commons^™

Protostrongylid Parasites And Pneumonia In Captive And Wild Thinhorn Sheep (Ovis Dalli), Emily J. Jenkins, A. M. Veitch, Susan J. Kutz, T. K. Bollinger, J. M. Chirino-Trejo, B. T. Elkin, K. H. West, Eric P. Hoberg, L. Polley

Harold W. Manter Laboratory of Parasitology: Faculty Publications

We describe health significance of protostrongylid parasites (Parelaphostrongylus odocoilei and Protostrongylus stilesi) and other respiratory pathogens in more than 50 naturally infected Dall’s sheep (Ovis dalli dalli) from the Mackenzie Mountains, Northwest Territories (1998–2002) as well as in three Stone’s sheep (O. d. stonei) experimentally infected with P. odocoilei (2000–2002). Histological lesions in the brain and distribution of P. odocoilei in the muscles of experimentally and naturally infected sheep were consistent with a previously hypothesized ‘‘central nervous system to muscle’’ pattern of migration for P. odocoilei. Dimensions of granulomas associated with eggs of …

Multiplication Of Ovaries In Ctenotaenia Marmotae (Frölich, 1802) (Cestoda: Anoplocephalidae), Sumiya Ganzorig, Yuzaburo Oku, Scott Lyell Gardner, Masao Kamiya

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Individuals of the cestode species Ctenotaenia marmotae (Frölich, 1802) (Cestoda: Anoplocephalidae) possessing duplicated rudimentary ovaries toward the medial parts of the segments were found in material collected from the Siberian marmot (Marmota sibirica) in Mongolia. This tapeworm is characterized by possessing one pair of female genitals per segment. The extra rudimentary ovaries that we found ranged from one to six in number per segment and were much smaller than the main pairs of ovaries. Although multiplication of ovaries was reported to occur in a species of Diandrya (Darrah, 1930) by Rausch (1980), this is the first report of …

Research Note: Hymenolepis Horrida (Cestoda: Hymenolepididae) And Catenotaenia Peromysci (Cestoda: Anoplocephalidae) In Voles From The Canadian Rockies, Yeen Ten Hwang, Scott Lyell Gardner, John S. Millar

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Cestodes from Clethrionomys gapperi (n=34) and Microtus longicaudus (n=8) from Kootenay National Park, British Columbia, Canada are reported. Two species of cestodes, Hymenolepis horrida (sensu lato) and Catenotaenia peromysci, were found in Clethrionomys gapperi, and one species of cestode, H. horrida, was found in Microtus longicaudus. Clethrionomys gapperi represents a new host record for C. peromysci. The Canadian Rockies is a new locality record for both cestode species.

Grânulos De Amido E Fitólitos Em Cálculos Dentários Humanos: Contribuição Ao Estudo Do Modo De Vida E Subsistência De Grupos Sambaquianos Do Litoral Sul Do Brasil, Verônica Wesolowski, Sheila Maria Ferraz Mendonça De Souza, Karl Reinhard, Gregório Ceccantini

Karl Reinhard Publications

Este artigo tem por objetivo apresentar os resultados da recuperação e análise de micro-vestígios vegetais retidos em cálculos dentários de grupos de pescadores-coletores do litoral sul do Brasil. Apresenta também os resultados das relações mantidas entre grânulos de amido e cárie, e entre fitólitos e desgaste dentário.

Através da dissolução química de cálculos dentários foram recuperados microvestígios vegetais em todos os indivíduos estudados. Foi evidenciado o consumo de alimentos amiláceos em todas as séries esqueléticas estudadas, demonstrando independência entre dieta com aporte de produtos vegetais e utilização de cerâmica. Foram encontrados resultados sugestivos de padrões de escolha de alimentos diferenciados …

Mist Netting Bias, Species Accumulation Curves, And The Rediscovery Of Two Bats On Montserrat (Lesser Antilles), Roxanne Larsen, Karen A. Boegler, Hugh H. Genoways, Will P. Masefield, Ronan A. Kirsch, Scott C. Pedersen

University of Nebraska State Museum: Mammalogy Papers

Mist nets are commonly used to survey bat populations and to estimate bat biodiversity, but several studies have found that mist net capture data and methods are biased due to a number of factors, including size and placement of nets, and the frequency at which investigators check their nets. Despite the wealth of literature and anecdotal reports, few investigators have quantified the interactions of bats with mist nets directly. We employed night vision camcorders to monitor bat behavior when bats encountered a mist net and then utilized these data to reevaluate years of survey data collected on Montserrat, Lesser Antilles. …

Genome Evolution In Major Escherichia Coli O157:H7 Lineages, Yongxiang Zhang, Chad Laing, Marina Steele, Kim Ziebell, Roger Johnson, Andrew K. Benson, Eduardo Taboada, Victor Gannon

Department of Food Science and Technology: Faculty Publications

Background: Genetic analysis of Escherichia coli O157:H7 strains has shown divergence into two distinct lineages, lineages I and II, that appear to have distinct ecological characteristics, with lineage I strains more commonly associated with human disease. In this study, microarray-based comparative genomic hybridization (CGH) was used to identify genomic differences among 31 E. coli O157:H7 strains that belong to various phage types (PTs) and different lineage-specific polymorphism assay (LSPA) types.
Results: A total of 4,084 out of 6,057 ORFs were detected in all E. coli O157:H7 strains and 1,751 were variably present or absent. Based on this data, E. coli …

Landholder Information For The Safe Use And Management Of 1080, Renee Donovan, David Goodall

Biosecurity published reports

This manual outlines your roles and responsibilities for using and managing 1080. In particular this manual outlines the essential information you need to know in regard to:

• The legislative requirements for 1080 control in Western Australia
• The properties and mode of action of 1080
• How to lodge an application to lay 1080 baits How to safely store and transport 1080
• The procedures and notification required to carry out a baiting proposal
• Personal safety, identifying signs of poisoning & effecting appropriate first aid treatment
• Your responsibilities for notifying DAFWA and the Police of any accidents or incidents
• Methods for evaluating the …

Amazonian Exploitation Revisited: Ecological Asymmetry And The Policy Pendulum, Mark B. Bush, Miles R. Silman

Ocean Engineering and Marine Sciences Faculty Publications

The influence of pre-Columbian human populations on Amazonian ecosystems is being actively debated. The long-standing view that Amazonia was only minimally impacted by human actions has been challenged, and a new paradigm of Amazonia as a "manufactured landscape" is emerging. If such disturbance was the norm until just 500 years ago, Amazonian ecosystems could be far more ecologically resilient to disturbance than previously supposed. Alternatively, if the "manufactured landscape" label is an overstatement, then policy that assumes such resilience may cause substantial and long-lasting ecological damage. We present paleoecological data suggesting a middle path, in which some areas were heavily …

Flavin Charge Transfer Transitions Assist Dna Photolyase Electron Transfer, Spiros S. Skourtis, Tatiana Prytkova, David Beratan

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

This contribution describes molecular dynamics, semi-empirical and ab-initio studies of the primary photo-induced electron transfer reaction in DNA photolyase. DNA photolyases are FADH−-containing proteins that repair UV-damaged DNA by photo-induced electron transfer. A DNA photolyase recognizes and binds to cyclobutatne pyrimidine dimer lesions of DNA. The protein repairs a bound lesion by transferring an electron to the lesion from FADH−, upon photo-excitation of FADH− with 350–450 nm light. We compute the lowest singlet excited states of FADH− in DNA photolyase using INDO/S configuration interaction, time-dependent density-functional, and time-dependent Hartree-Fock methods. The calculations identify the lowest singlet excited state of FADH− …

Seasonal Variation In Dune Vegetation At South Padre Island, Texas., Frank W. Judd, Robert I. Lonard, Kenneth R. Summy, Ruben A. Mazariegos

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Seasonal variation in vegetative cover, species richness, species composition and species importance were compared in the backshore and primary dunes topographic zones at a dune protection area and an unprotected site on South Padre Island, Texas, from May 2004 to April 2005. Cover was greatest in fall, but there was no significant variation among seasons in percent cover in the backshore or primary dunes at either site. Species richness was significantly greater at the dune protection site, but there was no significant seasonal variation in species richness in either topographic zone at either site. Species composition differed between topographic zones …

Optimization Of Porcine Buccal Mucosa For In Vitro Evaluation, Upendra D. Kulkarni

University of the Pacific Theses and Dissertations

Porcine buccal mucosa has been extensively used as in vitro model to study the permeability of drugs and assess their potential to deliver through buccal route. Porcine buccal mucosa is found to be very similar to human oral mucosa in structure and function. However, the in vitro permeation studies across porcine buccal mucosa show high variability which is mostly due to the various experimental and biological variables that are often overlooked while conducting such studies.

The precise nature of the permeability barrier offered by the various tissue layers of buccal mucosa was investigated in this study. It was observed that …

Nest Reuse By Eastern Kingbirds: Adaptive Behavior Or Ecological Constraint?, Lucas J. Redmond, Michael T. Murphy, Amy C. Dolan

Biology Faculty Publications and Presentations

The reuse of old nests by open-cup nesting passerines is a seemingly rare but potentially adaptive behavior if, as a consequence, females begin to breed earlier, lay larger clutches, or fledge more young. We report an unusually high rate of nest reuse (~10% of 341 nests) for Eastern Kingbirds (Tyrannus tyrannus) breeding at Malheur National Wildlife Refuge, Oregon. We found no difference in availability of nesting habitat or food abundance in territories in which nests were and were not reused. We also found no support for the hypotheses that kingbirds benefited from nest reuse by breeding earlier, laying …

Process Development For The Formation Of Post-Bonding Biorecognition Layers In Microfluidic Biosensors, Martin G. Perez, Phaninder R. Kanikella, James N. Reck, Chang-Soo Kim, Matthew O'Keefe

Electrical and Computer Engineering Faculty Research & Creative Works

Formation of the biorecognition layers within microfluidic sensor channels must be done after the completion of the channel structure since these layers cannot withstand the wafer bonding temperature. We propose a new post-bonding immobilization process to prepare the enzyme layers within microfluidic channels of electrochemical biosensors. An array of Pt vertical electrodes is electroplated using a SU-8 mold. The cured SU-8 is then removed by plasma etching to expose the Pt electrode and to define the fluidic channel cavity simultaneously. An array of enzyme posts is formed on the Pt surface by either electropolymerizing or photopolymerizing enzyme precursor solutions injected …

Screening Of Methanol And Acetone Extracts Of Fourteen Indian Medicinal Plants For Antimicrobial Activity, Yogeshkumar Vaghasiya, Sumitra Chanda

Turkish Journal of Biology

The methanol and acetone extracts of 14 plants belonging to different families were evaluated for antimicrobial activity against five Gram-positive bacteria: Staphylococcus aureus, Staphylococcus epidermidis, Bacillus cereus, Bacillus subtilis, Micrococcus flavus; seven Gram-negative bacteria: Pseudomonas aeruginosa, Escherichia coli, Klebsiella pneumoniae, Proteus mirabilis, Proteus vulgaris, Salmonella typhimurium, Citrobacter freundii; and three fungi: Candida tropicalis, Cryptococcus luteolus and Candida albicans. The in vitro antimicrobial activity was performed by agar disc diffusion method. The extractive yield was more in methanol than in acetone. The methanol extracts showed more antibacterial activity than acetone extracts. The most susceptible bacterium was K. pneumoniae and the most …

The Effect Of Walnuts Compared To Fatty Fish On Plasma And Erythrocyte Fatty Acid Composition, Lymphocyte Subsets And Inflammatory Mediators, Yu-Lan Ching

Loma Linda University Electronic Theses, Dissertations & Projects

The purpose of this study was to compare the effects of walnuts vs. fatty fish on circulating inflammatory markers, on lymphocyte subsets, on plasma concentrations of eicosanoids precursor polyunsaturated fatty acid and on erythrocyte membrane fatty acid composition. Under controlled metabolic feeding conditions and randomized crossover (3x3 Latin-square) design, 27 subjects alternately consumed a control diet, a walnut diet (1.5 oz (42.5g) /day of walnuts, 6 times/week) or a fish diet (8 oz (226g) /week of salmon) for 4 weeks each. Consumption of the walnut diet (ALA 5.43 g/day) compared to the fish diet (EPA 170 mg/day and DHA 590 …

Nitrocellulose As A General Tool For Fungal Slide Mounts, David Barry, Cecilia Chan, Gwilym A. Williams

Articles

No abstract provided.

Mandarin Yield Response To Partial Root Drying And Conventional Deficit Irrigation, Cevat Kirda, Fati̇h Topaloğlu, Sevi̇lay Topçu, Harun Kaman

Turkish Journal of Agriculture and Forestry

Fruit yield response of a mandarin (Citrus reticulata cv. Marisol) orchard to deficit irrigation, which was imposed either through conventional deficit irrigation (DI) or a newly evolving irrigation technique, called partial root drying (PRD), was investigated. The PRD practice simply requires wetting of one half of the rooting zone and leaving the other half dry, thereby utilising reduced amount of irrigation water applied. The wetted and dry sides are interchanged in the subsequent irrigations. Six irrigation treatments were tested: (1) TR, traditional farmers’ method of irrigation where irrigation management was left to the full control of a grower; (2) FULL …

Determination Of Water Conveyance Loss In The Menemen Open Canal Irrigation Network, Erhan Akkuzu, Hali̇l Baki̇ Ünal, Beki̇r Sitki Karataş

Turkish Journal of Agriculture and Forestry

The aim of this research was to determine water conveyance loss in the open canal irrigation network that serves the irrigation areas on the right and left banks of the Menemen Plain, in the lower part of the Gediz Basin. The research was carried out in the main, secondary, and tertiary canals. Water conveyance loss in the canals was measured by the inflow-outflow method, while water velocity was determined using a current-meter. Statistical relationships between canal types, canal shapes, and seepage loss were also investigated. The water conveyance loss at the main canal level was between 0.5% and 1.3% (0.0071-0.0126 …

Methyl Bromide Alternatives For Controlling Meloidogyne Incognita In Pepper Cultivars In The Eastern Mediterranean Region Of Turkey, M. Ali̇ Söğüt, İ. Hali̇l Elekçi̇oğlu

Turkish Journal of Agriculture and Forestry

The efficacy of soil solarization in combination with Trichoderma spp. (S+Tr), dazomet (S+D 300, 400 and 500 kg ha^{-1} of dosages) and fresh chicken manure (S+CM 12.5 t ha^{-1}) as methyl bromide (MB) alternatives against root-knot nematodes on pepper cultivars was investigated in plastic greenhouses in the eastern Mediterranean Region of Turkey. Soil solarization for 6 weeks increased soil temperature by 8.4 and 7.8 °C at 10 cm soil depth in 2000 and 2001, respectively. Second stage juvenile (J2) populations of M. incognita were efficiently reduced by S + Tr, S + D300, S + D400, S + D500, S …

Mating Type Groups Of Ascochyta Rabiei (Teleomorph: Didymella Rabiei), The Causal Agent Of Chickpea Blight In Central Anatolia, Harun Bayraktar, F. Sara Dolar, Sali̇h Maden

Turkish Journal of Agriculture and Forestry

The distribution of mating types of Ascochyta rabiei (teleomorph: Didymella rabiei) was studied on isolates collected from chickpea growing areas of Central Anatolia. Mating type assessments of 45 isolates from 6 different provinces were conducted under laboratory conditions. After keeping for 5-6 weeks, the pseudothecial development and ascospore production were observed on chickpea stem pieces that were incubated in 8 ± 1 °C and 85% relative humidity. Both mating types were found in all the provinces, except for Kayseri and Sivas. The majority of the isolates belonged to Mat 1-1 (57.8%) and the others (42.2%) to MAT 1-2. Additionally, the …

Growth And Stomatal Behaviour Of Two Strawberry Cultivars Under Long-Term Salinity Stress, Ece Turhan, Ati̇lla Eri̇ş

Turkish Journal of Agriculture and Forestry

Sodium chloride (NaCl) treatments were conducted on strawberry plants (Fragaria x ananassa cvs. Camarosa and Chandler) grown under greenhouse conditions. Modified Hoagland solution (one-third strength) containing 0 (control), 8.5, 17.0 and 34.0 mM NaCl was applied to the plants for 6 months. High NaCl concentrations caused serious reductions in growth parameters such as fresh weight (FW) of leaves, stems and roots, leaf area and the number of leaves. Addition of salt to the growth medium caused a reduction in stomatal conductance (Gs) and transpiration rate (E) of Camarosa. Saline water up to 34 mM NaCl did not have any influence …

Mapping Secondary Forest Succession With Geographic Information Systems: A Case Study From Bulanıkdere, Kırklareli, Turkey, Günay Çakir, Fati̇h Si̇vri̇kaya, Sali̇h Terzi̇oğlu, Emi̇n Zeki̇ Başkent, Turan Sönmez, Haci Ahmet Yolasiğmaz

Turkish Journal of Agriculture and Forestry

Developing forest management plans for sustaining the full range of forest values is a challenging task. One of the difficulties in this process is to set and achieve management objectives, and conservation targets. A sustainable forest management concept requires that a target forest structure (the composition and the configuration) be set before developing alternative management actions for the achievement of management objectives and the conservation targets. In this respect, developing and understanding vegetation succession play important roles in setting the target forest conditions. This study was conducted in the Bulanıkdere Forest planning unit (Kırklareli, Turkey) where the biodiversity-integrated multiple-use forest …

Critical Period Of Weed Control In Three Winter Oilseed Rape (Brassica Napus L.) Cultivars, Javad Hamzei, A. Dabbagh Mohammady Nasab, Farrokh Rahmizadeh Khoie, Aziz Javanshir, Mohammad Moghaddam

Turkish Journal of Agriculture and Forestry

Field experiments were carried out at the Agricultural Research Station, Faculty of Agriculture, University of Tabriz, in 2004-2005 and 2005-2006. Three winter oilseed rape cultivars (Okapi, Licord, and SLM046) with 12 weed interference durations were evaluated in a factorial experiment based on a randomized complete block design with 3 replications. The experiments consisted of 2 sets of treatments. In the first set, the crop was kept weed-free until the growth stages of 4-leaf, 8-leaf, stem elongation, flowering, and podding. In the second set, weeds were permitted to grow within the crop until the above-mentioned growth stages. Weedy and weed-free checks …

Integrated Management Of Stem Rot Disease (Sclerotium Rolfsii) Of Groundnut (Arachis Hypogaea L.) Using Rhizobium And Trichoderma Harzianum (Itcc - 4572), S. Ganesan, R. Ganesh Kuppusamy, R. Sekar

Turkish Journal of Agriculture and Forestry

Soil-borne plant pathogenic fungi cause heavy crop losses all over the world. With variable climate from region to region, most crops grown in India are susceptible to diseases caused by soil-borne fungal pathogens. Among tropical and subtropical land crops, groundnut (Arachis hypogaea L.) is an important oil seed crop, providing vegetable oil as human food and oil cake meal as animal poultry feed. A large number of diseases attack groundnut plants in India; of these, stem rot (collar rot) caused by Sclerotium rolfsii is the most common disease. Certain well-studied chemical pesticide management strategies are available for reducing damage by …

Relationships Between Remotely Sensed Data And Biomass Components In A Big Sagebrush (Artemisia Tridentata) Dominated Area In Yellowstone National Park, Mustafa Mi̇ri̇k, Jack E. Norland, Mario E. Biondini, Robert L. Crabtree, Gerald J. Michels

Turkish Journal of Agriculture and Forestry

The predictive power of a hyperspectral imagery for estimating woody and herbaceous biomass were examined for a big sagebrush (Artemisia tridentata) dominated area in Yellowstone National Park, Wyoming, United States of America. The normalized difference vegetation (NDV) and structure insensitive pigment (SIP) indices were used to investigate the relationships between biomass components and reflectance spectra. Ground data were collected in 13 sample plots 1 m^2 in size by clipping all herbaceous vegetation to ground level and stripping green leaves from big sagebrush plants. Strong relationships (R^2 from 0.83 to 0.96) were found between the hyperspectral data and biomass components. The …

Growth, Yield, And Quality Of Sweet Potato (Ipomoea Batatas (L.) Lam.) Cultivars In The Southeastern Anatolian And East Mediterranean Regions Of Turkey, Mehmet Emi̇n Çalişkan, Tahsi̇n Söğüt, Erkan Boydak, Eli̇f Ertürk, Hali̇s Arioğlu

Turkish Journal of Agriculture and Forestry

The study was carried out to determine the adaptation potential of sweet potato crops to different regions of Turkey. The study included 9 introduced genotypes of diverse origin and 2 local genotypes that were tested in 4 locations (Diyarbakır and Şanlıurfa representing the southeastern Anatolia region, and Adana and Hatay representing the Mediterranean region) in 2000 and 2001. Haulm and storage root growth of the cultivars were monitored at monthly intervals. Total and graded storage root yield, and some quality parameters were determined at the final harvest. Although haulm and storage growth varied according to location and year, all cultivars …

Genetic Variation Among Cotton (Gossypium Hirsutum L.) Cultivars For Seed-Set Efficiency, Yüksel Bölek, Mustafa Oğlakçi

Turkish Journal of Agriculture and Forestry

Seed-set efficiency (SSE) is one of the most important within-boll yield components in cotton production. Increased SSE can lead to increased seed number and, ultimately, to greater fiber yield. A field experiment was conducted during 2003-2004 to compare cotton cultivars (Gossypium hirsutum L.), in terms of the potential for improved SSE, in a Mediterranean region (Kahramanmaraş Agricultural Research Institute). SSE changed by year by about 1%-2%, averaging 94%-95%. Mean values for cultivars ranged from 95.78% (Deltaopal) to 93.98% (Nazilli 84S) in 2003, and from 95.67% (Sayar 314) to 94.75% (Carmen) in 2004. Cultivars were significantly different (2%-3%) only for the …

Determining The Relationships Between Yield And Yield Attributes In Sunflower, Yalçin Kaya, Göksel Evci̇, Sezgi̇n Durak, Veli̇ Pekcan, Tahi̇r Gücer

Turkish Journal of Agriculture and Forestry

Relationships between seed yield and agronomic characters in sunflower were investigated without considering genetic effects. Sunflower hybrids were evaluated in 3 categories: constant hybrids, control hybrids (mostly the same in each year), and test hybrids (changing each year). Seed yield was positively correlated with oil content, plant height, and 1000-seed weight, but flowering and physiological maturity period correlated negatively with yield based on the analyses in this research. A diverse relationship was determined between the seed yield of the hybrids and oil content. Results of the regression analysis indicated that, up to 40%-45% oil content, there was a negative correlation …

Effectiveness Of Bacillus Thuringiensis Var. Kurstaki On Thaumetopoea Solitaria Frey. (Lepidoptera: Thaumetopoeidae) Larvae In Laboratory Conditions, Mehmet Kubi̇lay Er, Serpi̇l Karadağ, Cafer Mart

Turkish Journal of Agriculture and Forestry

This study was conducted to determine the effect of Bacillus thuringiensis var. kurstaki on the larvae of Thaumetopoea solitaria in the search for an alternative control method with minimal undesirable side effects. Four larval stages were tested with various concentrations of the bacterium under controlled conditions by dipping pistachio saplings in relevant suspensions and feeding larvae on their leaves. The effect of B. thuringiensis var. kurstaki was significantly higher on the 1^{st} instar larvae than on the 2^{nd} and the 3^{rd} instar larvae, and the effect was significantly higher on the 2^{nd} instar larvae than on the 3^{rd} instar larvae. …

Quantifying Granivory In A Reconstructed Prairie: Affects Of Season, Species, Seed Predators, Sacrificial Food, And The Chemical Deterrent Capsaicin, Craig M. Hemsath

Dissertations and Theses @ UNI

Floral diversity of reconstructed prairies is often low compared to remnant prairies. Studies have demonstrated it is feasible to increase forb diversity in these prairies through overseeding and mowing, but overall rates of seedling establishment range from 0.1% to 1% of sown pure live seed. One explanation may be the ubiquitous populations of granivorous animals eating much of the seed . In this thesis I measured the amount of granivory occurring in a reconstructed prairie. I also tested how season, seed species, seed predator, sacrificial food, and chemical deterrents affect granivory in the reconstructed prairie. I hypothesized that granivores remove …