Life Sciences Commons^™

Molecular Basis Of Pathogenesis And Host Determination In Cercospora Sojina: From Phenotypic To Genotypic Patterns, Wagner Calegari Fagundes

Graduate Theses and Dissertations

Frogeye leaf spot (FLS), caused by Cercospora sojina, is an important and recurrent disease of soybean in many production regions. Genetic resistance is potentially one of the most cost-effective and sustainable strategies to control FLS. However, C. sojina has already demonstrated the ability to overcome resistance conveyed by single R-genes (resistance genes) of soybeans, followed by the emergence of new physiological races. Although understanding population genomics and the virulence gene inventories in fungal plant pathogens is extremely important to improve disease control measures, studies regarding host specificity and pathogenesis in C. sojina are very limited. Therefore, the overarching goal of …

Understanding And Predicting Nematode Damage On Soybean Using Spatially Weighted Analysis, Barry Boney

Graduate Theses and Dissertations

Aerial imagery offers great potential as a predictive scouting method and could allow growers to better understand crop performance over time. Evidence suggests that the seed treatments fluopyram and abamectin result in decreased reproduction and root galling by Meloidogyne incognita, but yield protection in fields with higher or different nematode pressure is unclear. The objective of this work was to determine the efficacy of these seed treatments compared to 1,3-dichloropropene (1,3-D) applied site-specifically and then predict where these might best be applied to other fields. In a soybean field infested with M. incognita, apparent electrical conductivity was highly correlated with …

A Generative Statistical Approach For Data Classification In A Biologically Inspired Design Tool, Marvin Manuel Arroyo Rujano

Graduate Theses and Dissertations

The objective of the research this thesis describes is to find a way to classify text-based descriptions of biological adaption to support Biologically Inspired design. Biologically inspired design is a fairly new field with ongoing research. There are different tools to assist designers and biologists in bio-inspired design. Some of the most common are BioTRIZ and AskNature. In recent years, more tools have been proposed to aid and make research in the field easier, for example, the Biologically Inspired Adaptive System Design (BIASD) tool. This tool was designed with the goal of helping designers in early design stages generate more …

Water Conservation Practices For Irrigation Of Turfgrass Lawns, Daniel Sandor

Graduate Theses and Dissertations

Turfgrass lawns are widely used in residential and commercial landscapes, providing many environmental, aesthetic, and recreational benefits. However, concerns and scrutiny arise with perceived maintenance requirements, particularly with regards to irrigation. It is important to manage irrigation in order to maximize water conservation without significantly reducing lawn quality. A series of field and greenhouse studies were conducted to investigate how water usage might be reduced in irrigation practices with the following proposed objectives: 1) evaluate the use of rain and soil moisture sensors in a humid transition zone environment; 2) evaluate the effects of chronic drought stress between drought-resistant and …

Epidemiological Studies Of Soybean Vein Necrosis Virus And Potential Resistance Mechanisms To Its Vector Neohydatothrips Variabilis (Beach), Jing Zhou

Graduate Theses and Dissertations

Soybean (Glycine max (L.) Merrill) is one the most important crops in global agriculture with annual production of over 260 million metric tons. As the dependence of a growing global population to soybean has increased, so does the importance of soybean diseases and pests. Over 200 pathogens attack soybean; among them, viruses pose a major threat to the soybean industries accounting for approximately 10% of the annual yield reduction caused by diseases in the past two decades. Soybean vein necrosis virus (SVNV) is a relatively newly discovered virus causing the homonymous disease. The widespread occurrence of the disease in major …

Assessing Biofiltration Without Ozonation For Removal Of Trihalomethane Precursors In Drinking Water At The Beaver Water District Drinking Water Treatment Plant, Sana Ajaz

Graduate Theses and Dissertations

Biofiltration without pre-ozonation has the capability to remove natural organic matter (NOM) fractions that serve as precursors of disinfection byproducts (DBPs), which include the four regulated trihalomethanes (THMs) and dichloroacetonitrile (DCAN). Rapid small-scale column tests (RSSCTs) and Pilot Plant filters operated at empty-bed contact times (EBCTs) of 4, 8, and 16 minutes were used to evaluate the performance of nutrient-amended (free ammonia and phosphorus) biofiltration for THM and DCAN precursor removal, as measured using formation potential (FP) tests. NOM surrogates – which include dissolved organic carbon (DOC), specific ultraviolet absorbance (SUVA254) and fluorescence-PARAFAC components – were measured weekly throughout the …

Microbiota Metabolic Product Deoxycholic Acid Prevents Campylobacter Jejuni Chicken Colonization Through Modulating Ceca Anaerobes, Bilal Ali Alrubaye

Graduate Theses and Dissertations

Campylobacter jejuni is a prevalent infectious enteritis mainly foodborne from chickens. Despite of reducing C. jejuni food contamination dramatically decreases campylobacteriosis, few effective approaches are available for the bacterial reduction in chickens. The aim of this study was to use microbial metabolic product deoxycholic acid (DCA) to reduce C. jejuni chicken colonization. Broiler chicks were fed 0 or 1.5 g/kg DCA, lithocholic acid (LCA), or urodeoxycholic acid (UDCA) in diets or orally gavaged with cholic acid (CA, 1.5g/kg body weight). Birds were also transplanted with DCA modulated anaerobes (DCA-Anearo) or aerobes (DCA-Aero). Birds were infected with 109 CFU/bird human clinical …

Diversification Across A Dynamic Landscape: Phylogeography And Riverscape Genetics Of Speckled Dace (Rhinichthys Osculus) In Western North America, Steven Michael Mussmann

Graduate Theses and Dissertations

Evolution occurs at various spatial and temporal scales. For example, speciation may occur in historic time, whereas localized adaptation is more contemporary. Each is required to identify and manage biodiversity. However, the relative abundance of Speckled Dace (Rhinichthys osculus), a small cyprinid fish in western North America (WNA) and the study species for this dissertation, establishes it an atypical conservation target, particularly when contrasted with the profusion of narrowly endemic forms it displays. Yet, the juxtaposition of ubiquity versus endemism provides an ideal model against which to test hypotheses regarding the geomorphic evolution of WNA. More specifically, it also allows …

Evolutionary Dynamics Of Brown Treesnake (Boiga Irregularis) Reproductive Ecology, With Implications For Invasive Species Control, Brenna Aaren Levine

Graduate Theses and Dissertations

Invasive species represent major threats to biodiversity, global economies, and human health. Consequently, extensive research has been directed towards improving methods that restrict and contain them. Yet, control measures can also act as agents of selection by significantly impacting the reproductive capacity of invasives (in the context of “eco-evo” dynamics). The end result is that control measures subsequently alter the fitness landscape of an invasive over ecologically-relevant time, and lose their efficacy by so doing. However, adaptive management can be promoted by investigating the relationships between reproductive ecology, strength of selection, and (additive) genetic variation. In short, effective control can …

Evaluation Of Genetic And Environmental Influences On Broiler Meat Quality, Sara Katherine Orlowski

Graduate Theses and Dissertations

The effect of both genetic and environmental influences on broiler meat quality were evaluated over three experiments. Selection response was assessed for broiler lines selected for high (HBY4) and low (LBY4) four day percentage breast yield which were formed from a random bred control (RAN). A modern random bred population (MRB) created in 2015 was evaluated for differences in 4 day percentage breast yield and the resulting differences in the incidence and severity of the woody breast and white striping myopathies. Additionally, the use of embryonic thermal manipulation to impact cell division and early caloric feed restriction to slow growth …

Ca2+ - Induced Structural Change Of Multi-Domain Collagen Binding Segments Of Collagenases Colg And Colh From Hathewaya Histolytica, Christopher Eric Ruth

Graduate Theses and Dissertations

Hathewaya histolytica, previously renamed as Clostridium histolyticum, secretes at least two collagenases, ColH and ColG, that allow for degradation of extracellular matrices of animal tissue. Hathewaya histolytica virulence factors are proposed to undergo domain rearrangement upon secretion from the bacteria to the host. In order to accomplish this, collagenases seek the least ordered regions in collagen to efficiently disassemble the fibril. Two types of domains, Polycystic Kidney Disease-like (PKD) and Collagen Binding Domain (CBD), direct the collagenases ability to disassemble the fibril. Calcium dependent structural change have been reported to increase in thermal stability and in tighter collagen binding for …

Quantitative Microbial Risk Assessment For Parts, Ground, And Msc Poultry Product Including Intervention Analysis And Exploration Of Enterobacteriaceae As An Indicator Organism In Poultry Processing, Leigh Ann Parette

Graduate Theses and Dissertations

Samples collected at five different large bird poultry processing facilities over a period of 7 months from prescald to post debone locations were enumerated for Enterobacteriaceae, Salmonella spp., and Campylobacter spp. and the results were used to create Quantitative Microbial Risk Analyses (QMRA) models for parts, ground, and mechanically separated chicken (MSC) products. Sensitivity analyses indicated the points in the process at which reductions would be most advantageous to the endpoint and simulation models were run to test reductions required to meet the current USDA performance standards.

These data were analyzed to determine the reductions from one node (location) to …

Impact Of Roadside Maintenance Practices On Larinus Minutus (Gyllenhal), A Biological Control Agent Of Spotted Knapweed, Mary Elizabeth Ferguson

Graduate Theses and Dissertations

Spotted knapweed, Centaurea stoebe, is an invasive weed found throughout much of the United States. Spotted knapweed is a rangeland weed where it was originally introduced into western North America in the 1880s.Where spotted knapweed spread to the southeastern U.S., it is found mostly along roadsides. It has been the focus of a biological control program beginning in the 1960s, with 12 insects established, with the final introductions occurring in the 1990s. After the success observed in the western U.S. and Canada with one of these insects, Larinus minutus, this weevil was established in northwestern Arkansas. It is too early …

Effect Of Cooking Method On Meat Texture In Normal And Woody Broiler Breast Fillets Using Instrumental Analysis And Descriptive Sensory Analysis, Lynda D. Combs

Graduate Theses and Dissertations

Over the past few decades, broiler breast meat has changed in terms of meat quality. Meat quality has deteriorated with the rise in the occurrence of muscle myopathies. Conditions such as woody breast, which is described as pale and bulging areas of distinct hardness, compromise both the textural and technological traits that have been associated with breast meat. The Meullenet-Owens Razor Shear (MORS) method is a common method for indirectly assessing poultry meat tenderness. A blunt version of the MORS (BMORS) has been shown to be a more sensitive method at higher degrees of toughness. A slightly larger stainless steel …

Where Are All Of Arkansas' Chinquapins? An Ecological Assessment Of Castanea Throughout The State, Logan Pierce Estes

Graduate Theses and Dissertations

Around the turn of the twentieth-century, the chestnut blight fungus (Cryphonectria parasitica) was accidentally introduced into North America. This strong pathogen, which specializes on trees of the genus Castanea, spread rapidly and within half a century had nearly extirpated North America’s Castanea natives from their ranges. During this catastrophe, the American chestnut (Castanea dentata) garnered much of the scientific attention, pushing the other Castanea natives – the chinquapins – to the wayside. More than a century following the spread of the blight, little research into the ecology of North America’s chinquapins had been performed, leaving these trees significantly underrepresented. The …

The Effectiveness Of Using Video Modeling Techniques To Improve Motor Skills For Preschool Children With Autism Spectrum Disorders, Atya Abdullah Hadadi

Graduate Theses and Dissertations

Beside the main syndromes of socialization and communication for individuals with autism spectrum disorders, they also have impairments in motor skills, such as ball skills (catching and throwing) and postural stability (standing and walking balance). The main objective of this dissertation is to improve motor skills for preschooler children with ASD through use of video-modeling techniques. A secondary objective of this research was to find a correlation between the development and improvement of ball skills and balance tasks. Twenty-six children with ASD were divided into two groups. Twenty-six children with ASD from 3-5 years old participated in two groups: one …

Toxicity Of Formulated Insecticide Mixtures To Apis And Non-Apis Bees, Joseph Edward Belsky

Graduate Theses and Dissertations

This work investigates ecotoxicology of new insecticide mixtures to Apis and non-Apis bees. Previous studies have demonstrated the acute and sub-lethal toxicity of individual active ingredient insecticides to honey bees and to a lesser extent non-Apis bees. However, the contact toxicity of formulated premix insecticides containing multiple active ingredients to bees has not been thoroughly assessed. To address this void, laboratory studies simulating exposure to four premix insecticides under different field-realistic scenarios were conducted for two bee species.

Honey bee, Apis mellifera (Linnaeus) contact exposure was examined by simulating three scenarios: (1) when bees continuously forage in a field and …

Linkage Mapping For Soybean (Glycine Max) Flood Tolerance, Wade Stiles Hummer

Graduate Theses and Dissertations

Flood tolerance in soybean (Glycine max) is not a well-characterized trait, yet flooding damage is second only to drought stress in terms of yield reduction. The objectives of this study were to determine genetic variation for flooding tolerance in two populations of soybean recombinant inbred lines (RILs) and to identify and confirm flood tolerant QTL. Population A (WHA) consisted of 111 RILs derived from the cross 5002T by 91210-350 and Population B (WHB) consisted of 79 RILs from the cross RA-452 by Osage. Experiments were conducted at the Rice Research and Extension Center (RREC) near Stuttgart, AR in 2015 and …

Mitigating The Risk For Glufosinate Resistance, Christopher John Meyer

Graduate Theses and Dissertations

While glufosinate-resistant weeds have not yet been identified in U.S. row crops, rapid evolution of glyphosate-resistance, and resulting cost to U.S. farmers, demonstrates the need to responsibly steward the limited number of herbicides available in agricultural systems. Field and laboratory experiments were conducted to: 1) Identify herbicide interactions that can occur in Enlist™ and Roundup Ready® Xtend® systems; 2) Identify herbicide interactions that occur when glufosinate is mixed with fomesafen, clethodim, and glyphosate; 3) Determine the optimum rate structure and application timings when multiple POST applications of glufosinate are applied to LibertyLink soybean; 4) Use 14C techniques to determine why …

Influence Of Loss Of Function Of The Fatty Acid Desaturase 7 Gene On Photosynthetic Activity And Foliar Redox Status, Janithri Savindya Wickramanayake

Graduate Theses and Dissertations

Fatty Acid Desaturase7 (FAD7) is a chloroplast-localized enzyme that converts 16 and 18 carbon dienoic fatty acids to trienoic fatty acids. The suppressor of prosystemin-mediated response2 (spr2) mutant in tomato (Solanum lycopersicum) and the fad7-1 mutant in Arabidopsis (Arabidopsis thaliana) result in the loss of function of FAD7, which alter the fatty acid profiles of chloroplast membranes and enhance resistance against aphids. This research contributes toward the long-term goal of identifying factors that determine aphid resistance in FAD7 mutants. Previous data suggested constitutive differences between spr2 and WT including increased expression of genes associated with photosynthesis and differences in redox …

Classifying Interdependencies In The Food And Agriculture Critical Infrastructure Sector, John Doerpinghaus

Graduate Theses and Dissertations

This work classifies examples of infrastructure interdependencies found in the food and agriculture critical infrastructure sector. Interdependencies are identified through an examination of rice and poultry agriculture throughout the state of Arkansas. The subtleties of interdependence examples in the food and agriculture sector are inadequately captured by the well-studied interdependence classification taxonomies. Through 39 interviews, we develop an understanding of the subtle temporal, geographic, and productivity scales of interdependence in over 100 examples and present five new, distinct classifications of interdependence: (1) dynamic physical, (2) dynamic geographic, (3) deadline, (4) delay, and (5) human, economic, and natural resource interdependencies. An …

Spotted Wing Drosophila (Drosophila Suzukii) In Arkansas: Winter Morphs, Wild Hosts, And Fungal Control, Rosalee Knipp

Graduate Theses and Dissertations

Drosophila suzukii (Matsumura), or spotted wing drosophila (SWD), is an invasive fruit fly pest that was first found in the United States in 2008. Unlike native Drosophila, SWD females have a serrated ovipositor that allows them to attack ripening fruit. Since its introduction, it is unclear how and where they overwinter in Arkansas, what local hosts they utilize and what potential alternative tactics can be used to combat this pest. In states north of Arkansas, winter morphs (WM) of SWD are larger, darker pigmented, and can survive colder temperatures than SWD flies found in the summer. These WM were found …

Risk And Return Comparisons Of Pre-Harvest Marketing Strategies, John Leander Turner V

Graduate Theses and Dissertations

This paper analyzes risk and returns associated with pre-harvest corn grain marketing strategies for the state of Arkansas. Farming is characterized by a volatile environment. Numerous risks are taken by producers in order to provide commodities that are bought and sold by various parties in the supply chain. Price, yield, and production costs vary daily and can have large variation between years. Risk and Return Comparisons of Pre-harvest Marketing Strategies examines the effectiveness of using pre-harvest marketing strategies to enhance returns and to mitigate inherent price risk in the Memphis cash corn market. Thirteen strategies are compared to the October …

Imperfect Produce Pricing: Relationships Between Price Percent Discount And Demographic Traits Of Customers, April Foster

Graduate Theses and Dissertations

This research sought to understand the impact of price reductions on consumer spending behaviors related to the purchase of imperfect produce. Additionally, the correlation between consumers’ demographics and their willingness to purchase imperfect produce at various price points was evaluated. The data was viewed with mindfulness toward reducing food loss as a function of the world food crisis. More specifically, the purpose of this study was to describe the relationship between Washington County, Arkansas consumers’ demographic traits and the percent discount at which they are willing to alter their behavior to purchase specific imperfect produce items. Using the Theory of …

Genetic And Epigenetic Investigations On Pulmonary Hypertension Syndrome In Meat Type- Chickens, Khaloud Alzahrani

Graduate Theses and Dissertations

This dissertation presents a collection of studies that investigate the genetic and epigenetic associations to ascites phenotype in broiler chickens. Ascites is a significant metabolic disease associated with fast-growing meat-type chickens (broilers) and is a terminal result of pulmonary hypertension syndrome PHS. It is a multi-factorial syndrome caused by interactions between genetic, physiological, environmental, and managemental factors. It was estimated that ascites accounts for losses of about US$1 billion annually worldwide and for over 25% of broilers mortality. Although traditional and molecular genetic methods in the selection and in performance improvements, has greatly reduced ascites frequency, yet it has not …

Efficacy Of Antimicrobial Mitigation On Escherichia Coli Cfu And Growth And Development Of Hydroponic Leafy Greens, Nathan J. Eylands

Graduate Theses and Dissertations

The Food and Drug Administration (FDA) have set new standards that apply to agriculturalists producing crops eaten fresh and/or raw by consumers. This new produce safety rule, known as the Food Safety Modernization Act (FSMA), has established science-based standards for all areas of production in agriculture with regards to microbial contamination. Escherichia coli (E. coli) O157:H7 is a particular bacterium of concern under FSMA guidelines. Grower compliance is mandatory and therefore vital to the continuation of any farm. Greenhouse hydroponic growers have shown advantages in efficiency when compared to conventional farming methodology. Those, however, with recirculating hydroponic systems face unique …

The First In Vivo Human Methionine Sulfide Proteome And The Impact Of Smoking, Abdullah Qassab

Graduate Theses and Dissertations

Reactive oxygen species are naturally generated within the human body and they are known to modulate signaling pathway and mediate other physiological activities. However, excessive generation of ROS and the inability of body defense system in detoxifying them results in the so called “oxidative stress”. Methionine has powerful antioxidant properties due to the presence of electronegative sulfur in its structure. Therefore, Met is readily oxidized, and methionine sulfoxide has been linked to several pathological conditions.

The urinary proteome is an attractive candidate for the discovery of biomarkers to diagnose and classify health conditions because of the non-invasive collection procedure. However, …

Systems To Attract And Feed Pollinators In Warm-Season Lawns, Michelle Wisdom

Graduate Theses and Dissertations

Pollinating insects are responsible for the production of many agricultural crops and they require floral resources to fulfill their life-cycle. Ideally, pollinating insects will encounter a diversity of floral resources across their entire season of activity, and those floral resources can include both herbaceous and woody plant species. Managed turfgrass areas have been identified as potential locations for creating pollinator-friendly habitats. In the transition zone, where both warm- and cool-season turfgrass species are present, the persistence of herbaceous plants in warm-season turfgrasses such as bermudagrass (Cynodon spp.) and buffalograss (Buchloe dactyloides), may be affected not only by the competitive nature …

Spatio-Temporal Reconstruction Of Remote Sensing Observations, Kamrul Khan

Graduate Theses and Dissertations

The USDA Forest Service aims to use satellite imagery for monitoring and predicting changes in forest conditions over time within the country. We specifically focus on a 230, 400 hectares region in north-central Wisconsin between 2003 - 2012. The auxiliary data collected from the satellite imagery of this region are relatively dense in space and time and can be used to efficiently predict how the forest condition changed over that decade. However, these records have a significant proportion of missing values due to weather conditions and system failures. To fill in these missing values, we build spaciotemporal models based on …

Physiological Characterization Of The Soynam Parental Lines Under Field Conditions, Akshita Mishra

Graduate Theses and Dissertations

The narrow genetic pool of soybean (Glycine max L. Merr.) in North America can limit its future yield gains. Among the worldwide germplasm collection of 45,000 unique landraces, only 80 contribute 99% to the collective parentage of North American soybean cultivars. Among these 80 landraces, just 17 contribute to 86% of the collective parentage of the modern cultivars. The Soybean Nested Association Mapping population (SoyNAM) was therefore developed with the objective of diversifying the soybean gene pool. Forty diverse soybean genotypes from maturity groups (MG) 1 through 5 were crossed with a common MG 3 parent to develop 40 recombinant …