Life Sciences Commons^™

Modeling Carbon Allocation, Growth And Recovery In Scrub Oaks Experiencing Aboveground Disturbance, Troy J. Seiler

Electronic Theses and Dissertations

Allocation of assimilated carbon amongst plant metabolic processes and tissues is important to understanding ecosystem carbon cycles. Due to the range of spatio-temporal scales and complex process interactions involved, direct measurements of allocation in natural environments are logistically difficult. Modeling approaches provide tools to examine these patterns by integrating finer scale process measurements. One such method is root:shoot balance, where plant growth is limited by either shoot activity (i.e. photosynthesis) or root activity (i.e. water and nutrient uptake). This method shows promise for application on frequently disturbed systems which perturb aboveground biomass and thus create imbalances in root and shoot …

The Effects Of Age On Reproduction In A Citrus Root Weevil Diaprepes Abbreviatus, Heather R. Chasez

Electronic Theses and Dissertations

Understanding the factors influencing mate choice is a major focus of sexual selection. Many factors are potentially involved, including age of the individual. The good genes model and the youth advantage model both make predictions about the effect of age on mate choice. Under the good genes model older mates would be the more preferable due to their proven high survivability. The “youth advantage” model, predicts that young to intermediate age males would be more advantageous as mates because of a decrease in sperm quality and the possibility of increased germ-line mutations in older animals. I examined the effects of …

Understanding The Invasion Of Florida's Intertidal Crassostrea Virginica Reefs By Non-Native Marine Invertebrate Species, Ethan Fletcher Nash

Electronic Theses and Dissertations

Predicting the locations of new biological invasions has become a high priority for biologists as well as trying to predict if newly introduced species will become damaging to native ecosystems. Reefs of the eastern oyster Crassostrea virginica in Mosquito Lagoon, Florida have been highly disturbed in recent years resulting in dead reefs (piles of dead, disarticulated shells) some of which have been restored. I conducted oyster reef surveys for non-native invertebrates to determine if disturbance on these oyster reefs might assist invasion by two species, Mytella charruana and Perna viridis, recently introduced to the southeastern coast of the United States. …

Altered Calcium Handling In Cerebellar Purkinje Neurons With The Malignant Hyperthermia Mutation, Ryr1-Y522s/+, George C. Talbott

Electronic Theses and Dissertations

To investigate the etiology of malignant hyperthermia and central core disease, mouse models have recently been generated and characterized (Chelu et al., 2006). These RyRY522S/+ knock-in mutant mice provide an excellent tool to investigate calcium dysregulation, its pathological consequences, and potential therapeutic approaches. Skeletal muscle harboring this mutation exhibits calcium leak from internal stores and an increased sensitivity to activation by caffeine, voltage, and temperature (Durham et al., 2008). Although alterations in RyR1 channel function and resultant changes in cellular function have been characterized in skeletal muscle, the effects of MH mutations in RyR1 on central nervous system function have …

Neurochemical Levels Correlate With Population Level Differences In Social Structure And Individual Behavior In The Polyphenic Spider, Anelosimus Studiosus., Jennifer Bryson Price

Electronic Theses and Dissertations

Anelosimus studiosus is a socially polyphenic spider. Individuals can be classified as social/tolerant or solitary/aggressive. These behavioral differences are associated with considerable variation in social structure. Here, we begin to examine the physiological differences that may underlie the behavioral dimorphism in this species and possible implications for the evolution of sociality. Octopamine is a neurotransmitter that has been found to elevate aggression in invertebrates. Serotonin has been shown, in some cases, to interact antagonistically with octopamine. We used High Pressure Liquid Chromatography with Electrochemical Detection to quantify levels of these neurochemicals among adult females from social (multi-female) and solitary (single-female) …

Lack Of Rhythmicity In The Honey Bee Queen: An Investigation Of Temporal Behavioral Patterns In Apis Mellifera Ligustica., Jennifer N. Johnson

Electronic Theses and Dissertations

Little is known about the behavioral patterns of honey bee queens. To determine if mated honey bee queens possess diel rhythmicity in behavior, we observed them in glass-sided observation hives using three types of observation regimes: focal studies consisting of 2-hour and 24-hour continuous observations as well as scan-sampling of multiple queens. All behaviors (active: walking, inspecting, egg-laying, begging for food, feeding, and grooming self; inactive: standing) occurred at all times of day and night, but no queen showed consistent diel rhythmicity in any of the individual behaviors. There were no consistent diel differences in active versus inactive behaviors or …

Molecular Evidence Suggests Multiple Evolutionary Origins Of Sociality In The Polyphenic Spider Anelosimus Studiosus (Araneae: Theridiidae)., Nathaniel O. Weber

Electronic Theses and Dissertations

Anelosimus studiosus exhibits two behavioral phenotypes: subsocial and social. This is the only documented spider inhabiting a temperate climate exhibiting social behavior. While the subsocial phenotype is most common throughout the range, the social behavior occurs in isolated pockets in northern latitudes. This study examines the origins of the social phenotype within a segment of the spider's range. Two hypotheses are tested: 1) pockets of social behavior represent a single origin or 2) pockets of social behavior represent local evolutions, thus leading to multiple origins of evolution. Microsatellite loci were used to determine genetic structure of the population and to …

Mosaic Analysis With Double Markers (Madm) As A Method To Map Cell Fates In Adult Mouse Taste Buds., Preston D. Moore

Electronic Theses and Dissertations

Taste buds are chemosensory endorgans embedded in the oral epithelium composed of cells that undergo continuous replacement. Mature taste cells live on average 10-14 days and are replaced by new cells when they die. However, the mechanism by which taste cells are produced and integrated into the taste bud as mature taste cells remains unknown. Previous studies approached this issue from either cell cycle gene expression properties or lineage tracing of precursor cells. In our study, we apply a new fate mapping technique that combines these two ideas. This technique, Mosaic Analysis with Double Markers, allows for simultaneous gene knockout …

Modulation Of Alpha-Subunit Visit-Dg Sequence Residues Ser-347, Gly-351 And Thr-349 In The Catalytic Sites Of Escherichia Coli Atp Synthase., Laura Elaine Brudecki

Electronic Theses and Dissertations

Binding of inorganic phosphate (P_i) in ATP synthase catalytic sites is a crucial step for the synthesis of adenosine-5'-triphosphate (ATP). ATP is the fundamental means of cellular energy in almost every organism, and in order to gain insight into the regulation of ATP catalysis, critical amino acid residues responsible for binding P_i must be identified. Here, we investigate the role of highly conserved α-subunit VISIT-DG sequence residues αSer-347, αGly-351, and αThr-349 in P_i binding. Mutations αS347A/Q, αG351Q, αT349A/D/R, βR182A, and αT349R/βR182A were generated via site directed mutagenesis. Results from biochemical assays showed that αSer-347 is required …

Discovery And Characterization Of An Antibiotic From The Soil Bacterium Bacillus Sp., Thomas S. Barber

Electronic Theses and Dissertations

Many important antibiotics have become nearly obsolete due to the rise of antibiotic resistant pathogens. Rhodococcus, an actinomycete related to the prolific antibiotic producing genus Streptomyces, harbors over 30 genes for secondary metabolism that could be involved in antibiotic production. Several antibiotics have already been reported for Rhodococcus, suggesting the genus may be a good source for new inhibitory compounds. Fifty four soil bacteria were isolated using enrichment culture techniques (including 37 Rhodococcus) and screened for antibiotic producers. BTHX2, a species of Bacillus was found to have activity against Micrococcus luteus and Rhodococcus erythropolis. BTHX2 …

Effect Of Stress On Mucin Expression In The Gastrointestinal Tract Of Mice., Bupe Martha Habiyambere

Electronic Theses and Dissertations

This study investigated the effects of chronic stress on mucin expression in the GIT of mice. Sixteen ICR male mice were randomly divided into treated and control animals. Restraint stress was applied to the treated group for 21 days. Body weight (BW) changes and feed consumed (FC) were regularly recorded. After 21 days mice were euthanized and blood, GIT mucosa, and GIT sections were collected. Serum corticosterone levels were determined. The GIT sections were fixed, paraffin embedded, sectioned, and stained with AB-PAS to visualize goblet cells. Mucin expression was determined using qPCR. As expected stressed mice showed higher corticosterone than …

Role Of Eukaryotic Sel-1 Like Repeat Containing Genes In Helicobacter Pylori Evolution And Pathogenesis., Kalyani Putty

Electronic Theses and Dissertations

Background: Helicobacter pylori (Hp) establishes life-long gastric infection in billions of humans, and is often responsible for diseases such as peptic ulcer and gastric cancer. Cumulative actions of genetic drift and natural selection over several millennia sculpted the present Hp population structure, which is characterized by extreme genetic diversity and striking geographic clustering of genotypes. Natural selection is more commonly imprinted in DNA sequences of Hp proteins that interact with host components; however, in most instances biological relevance of selection during Hp infection remains unknown. Here, I attempted to elucidate the consequence of natural selection in two different contexts: (1) …

Effects Of Short-Term, High-Force Resistance Training On High-Intensity Exercise Capacity., Patrick Abi Nader

Electronic Theses and Dissertations

The purpose of this study was to assess the effects of short-term high-intensity resistance training on time to exhaustion at maximal aerobic output. It was hypothesized that 2 weeks of training will induce improvements in performance at maximal aerobic output. Eighteen subjects participated in this study. Subjects were assigned to a control (n=8) or resistance training (n=10) groups. The resistance training group participated in 5 sessions of strength training over a period of 2 weeks on the leg press device. Both groups participated in pre and post intervention testing. After the intervention strength in the training group significantly increased (p=.00). …

Role Of Sabp2 In Systemic Acquired Resistance Induced By Acibenzolar-S-Methyl In Plants., Diwaker Tripathi

Electronic Theses and Dissertations

Plants have evolved an efficient mechanism to defend themselves against pathogens. Many biotic and abiotic agents have been shown to induce defense mechanism in plants. Acibenzolar-S-Methyl (ASM) is a commercially available chemical inducer of local and systemic resistance (SAR) response in plants. ASM functioning at molecular level is mostly unclear. This research was designed to investigate the mechanism of ASM action in plants. It was hypothesized that SABP2, a plant protein, plays an important role in ASM-mediated defense signaling. Biochemical studies were performed to test the interaction between SABP2 and ASM. Transgenic SABP2-silenced tobacco plants were used to determine the …

Isolation Of A Siderophore Produced By Methicillin-Resistant Staphylococcus Aureus Strain H372., Rachel Elizabeth Presswood

Electronic Theses and Dissertations

Iron is necessary for many cellular processes such as the electron transport chain and gene regulation. However, most iron on earth is found in insoluble iron-hydroxide complexes. In addition, iron is tightly sequestered in the human body by proteins such as transferrin, making it unavailable for pathogens. In order to overcome these limitations bacteria have evolved siderophores. Siderophores are low molecular weight compounds that bind ferric iron with a high affinity. Staphylococcus aureus is an important human pathogen that is known to produce at least four siderophores, and these siderophores contribute to its virulence. S. aureus strain H372 was found …

Overexpression Of Amyloid Precursor Protein Induces Mitochondrial Oxidative Stress And Activates The Intrinsic Apoptosis Pathway, Matthew G. Bartley

Electronic Theses and Dissertations

Down syndrome (DS) is the most common genetic form of cognitive disability and is caused by trisomy of chromosome 21. Within chromosome 21 is the gene, amyloid precursor protein (APP). Proteolysis of APP into toxic and aggregate-prone, beta-amyloid fragments underlies the pathophysiology of Alzheimer's disease (AD). Individuals with DS develop the neuropathology that can be diagnosed as AD; however, the role of APP overexpression in this comorbidity is presently unclear. Here, we elucidated the mechanism of cell death induced by overexpression of wild type APP. Chinese hamster ovary cells transfected with a DsRed-APP fusion construct displayed caspase-3 activation and nuclear …

Neuroprotective Effects Of Anthocyanins On Neuronal Death Induced By Inhibition Of Bcl-2 And Oxidative Stress, Natalie A. Kelsey

Electronic Theses and Dissertations

Neurodegenerative diseases such as Parkinson’s and amyotrophic lateral sclerosis have devastating consequences to the afflicted patients. A major cellular pathophysiology underlying these diseases is mitochondrial oxidative stress (MOS) leading to neuronal death. Here, we investigated the neuroprotective effects of a novel class of nutraceuticals, anthocyanins, against MOS-induced death in primary cultures of rat cerebellar granule neurons (CGNs). Anthocyanins are natural antioxidants whose neuroprotective potential has yet to be examined in detail. Kuromanin and callistephin are anthocyanins derived from black rice and strawberries, respectively. Glutathione (GSH)-sensitive MOS and intrinsic apoptosis were induced in CGNs by the Bcl-2 inhibitor, HA14-1. Callistephin and …

Greening The Green Revolution: Moving Beyond Chemicals To Sustainable Agricultural Practices, Elizabeth G. Crawley

Electronic Theses and Dissertations

Agriculture has dominated the economy of many developing countries for centuries, which has led to development policies that center on agricultural development. An obvious approach to improved production is to decrease agricultural losses in the fields and increase efficiency to markets. This study focuses on the developmental role of pesticides and chemical fertilizers on non-traditional agricultural export farming and the adoption of IPM techniques. With farmers in the Comayagua Valley of Honduras, an Asian vegetable production center for the country, as the study population, the costs and benefits of planting oriental vegetables was examined. Statistical analysis was used to examine …

Error Correcting Codes And The Human Genome., Suzanne Mclean Lyle

Electronic Theses and Dissertations

In this work, we study error correcting codes and generalize the concepts with a view toward a novel application in the study of DNA sequences. The author investigates the possibility that an error correcting linear code could be included in the human genome through application and research. The author finds that while it is an accepted hypothesis that it is reasonable that some kind of error correcting code is used in DNA, no one has actually been able to identify one. The author uses the application to illustrate how the subject of coding theory can provide a teaching enrichment activity …

Resistance Training Increases The Expression Of Ampk, Mtor, And Glut4 In Previously Sedentary Subjects And Subjects With The Metabolic Syndrome., Andrew Steven Layne

Electronic Theses and Dissertations

Exercise has been considered a cornerstone of diabetes prevention and treatment for decades, but the benefits of resistance training are less clear. Nineteen non-diabetic subjects (10 metabolic syndrome, 9 sedentary controls) underwent 8 weeks of supervised resistance training. After training, strength and V̇ O_2max increased by 10% in both groups. Percent body fat decreased in subjects with the metabolic syndrome. Additionally, lean body mass increased in both groups (p<0.05). Expression of glucose transporter protein-4 (GLUT4), the principle insulin-responsive glucose transporter, increased significantly in both groups. 5-adenosine monophosphateactivated protein kinase (AMPK) and mammalian target of rapamycin (mTOR) expression increased in both groups, indicating increased protein synthesis and mitochondrial biogenesis. Markers of insulin resistance measured by a euglycemic hyperinsulinemic clamp did not improve in subjects with the metabolic syndrome but increased significantly in control subjects (13%). Resistance training upregulates intracellular signaling pathways that may be beneficial for ameliorating the metabolic syndrome.

Isolation And Identification Of The Siderophore "Vicibactin" Produced By Rhizobium Leguminosarum Atcc 14479., William H. Wright Iv

Electronic Theses and Dissertations

Siderophores are small, iron chelating molecules produced by many bacteria to help meet the iron requirements of the cell. Multiple metabolic functions require iron as it serves as a cofactor in many enzymes and cellular processes. However, in the presence of oxygen and at physiologic pH, iron forms insoluble ferric complexes that cause the nutrient to be unavailable to bacterial cells. Siderophores alleviate this limitation by chelating the ferric iron, rendering it soluble and available for uptake. One group of microorganisms known for their ability to produce siderophores is the rhizobia. These bacteria are characterized both by their formation of …

Characteristics Of Nectar Production And Standing Crop In Campsis Radicans (Bignoniaceae)., Andrea Alexis Edge

Electronic Theses and Dissertations

We examined several aspects of nectar production in Campsis radicans to better understand how standing crop is affected and how production affects pollinator visitation. In all experiments, nectar and concentration of flowers were measured and total sugar was calculated. Flowers do not produce additional nectar unless nectar is removed, and it is not resorbed. Volume of standing crop and total sugar fluctuates throughout the day, whereas concentration remains constant. Age and time of day significantly affect regeneration of nectar and sugar. The number of removals did not significantly affect the amount of nectar or sugar regenerated; however, concentration declined significantly …

Hermit Thrush (Catharus Guttatus) And Veery (C. Fuscescens) Breeding Habitat Associations In Southern Appalachian High-Elevation Forests., Andrew J. Laughlin

Electronic Theses and Dissertations

The Hermit Thrush is a new breeding bird in the Southern Appalachian high-elevation mountains, having expanded its range southward over the last few decades. Here it is sympatric with the Veery, a congeneric breeding resident. In order to more fully understand why the range expansion took place and to understand more about the local ecology of the newly arrived bird, I measured several habitat variables in 30 Hermit Thrush and 24 Veery territories. Principal Components Analysis and Cluster Analysis brought to light several patterns of habitat preferences for these 2 species. Hermit Thrushes prefer territories with more leaf litter on …

A Family-Based Association Study Of Conduct Disorder., Xueqiu Jian

Electronic Theses and Dissertations

Conduct disorder (CD) is a psychiatric syndrome in childhood and adolescence that is one of the most common childhood disorders with continuously increasing prevalence but uncertain pathogenesis. We performed a genome-wide, family-based association study of CD using P2BAT/FBAT software. The data is gathered from Collaborative Study on the Genetics of Alcoholism (COGA) and International Multi-Center ADHD Genetics Project (IMAGE).

Using COGA data, we identified 20 markers which showed suggestive associations (p<10^-3) with CD. Nine of them are located in known genes. Two genes, ADAM10 and CAMK2A, which had been reported associated with Alzheimer's disease (AD), bipolar disorder, …

Comparative Morphometrics Of The Sacral Vertebra In Aneides (Caudata: Plethodontidae)., Lisa Nicole Schaaf

Electronic Theses and Dissertations

The genus Aneides (Caudata: Plethodontidae) is an arboreal salamander with a prehensile tail and a distribution that spans North America. It is hypothesized that adaptations for arboreality will be visible in the osteology of the sacral vertebra either by qualitative analysis or linear and morphometric analysis in comparison with other plethodontid salamanders. This study demonstrates that while qualitative and quantitative analyses are successful at making genus-level distinctions between taxa, identification to lower taxonomic levels remains inconclusive. Linear morphometrics and dorsal Procrustes landmarks were the most successful metrics to identify known taxa. Two unidentified fossil salamander sacral vertebrae from Oregon Caves …

Inhibition Of Escherichia Coli Atp Synthase By Polyphenols And Their Derivatives., Prasanna Keerthi Dadi

Electronic Theses and Dissertations

We have studied the inhibitory effect of natural and structurally modified polyphenols on Escherichia coli ATP synthase to test (I) if the beneficial dietary effects of polyphenols are related to their inhibitory actions on ATP synthase, (II) if inhibitory effects of polyphenolic compound could be augmented through structural modifications, and (III) if they can act as antimicrobial agent through their actions on ATP synthesis. X-ray crystal structures of polyphenol binding sites suggested that polyphenols bind at a distinct polyphenol binding pocket, at the interface of α,β,γ-subunits. We found that both natural and modified polyphenols inhibit E. coli ATP synthase to …

The Effects Of Betadine®, Polyvinylpyrrolidone (Pvp), And Iodine On Regeneration In The Planarian Dugesia Tigrina., Traci R. Shaffer

Electronic Theses and Dissertations

The freshwater planarian has a great capacity to regenerate and is an ideal animal model in the study of stem cell and regeneration biology. In this study planarian regenerating new tails were exposed to nonlethal doses of Betadine®, Polyvinylpyrrolidone (PVP), and Iodine. Betadine® is a topical antiseptic commonly used in the healthcare setting and may have a detrimental effect on wound healing. PVP is linked to iodine to create povidone-iodine, the active ingredient in Betadine®. Initially, a preliminary test was performed on the worms to determine the nonlethal concentrations of these chemicals . After this nonlethal concentration was determined, tails …

Innervation, Distribution And Morphology Of Calcitonin Gene Related Peptide And Substancep Immunoreactive Axons In The Whole-Mount Atria Of Fvb Mice, Liang Li

Electronic Theses and Dissertations

Degeneration of nociceptive afferent axons and terminals in the heart is associated with painless sudden cardiac death. However, innervation, distribution and morphological structures of sympathetic cardiac nociceptive afferent axons and terminals have not yet been fully characterized. The aim of the present study is to characterize the density, arrangement, and structural features of differentiated sympathetic afferent axons and terminals in whole-mount FVB mouse atria. FVB mice (3-6 months old) were perfused and the tissues were fixed. The right and left atria were processed with immunohistochemistry. Calcitonin gene-related peptide (CGRP) and substance P (SP) are two neuropeptides which have been widely …

Expression And Characterization Of Antimicrobial Peptides Retrocyclin-101 And Protegrin-1 In Chloroplasts To Control Viral And Bacterial Infections, Baichuan Li

Electronic Theses and Dissertations

Retrocyclin-101 (RC101) and Protegrin-1 (PG1) are two important antimicrobial peptides that can be used as therapeutic agents against bacterial and/or viral infections, especially those caused by the HIV-1 or sexually-transmitted bacteria. Because of their antimicrobial activity and complex secondary structures, they have not yet been produced in microbial systems and their chemical synthesis is prohibitively expensive. Therefore, we created chloroplast transformation vectors with the RC101 or PG1 coding sequence, fused with GFP to confer stability, furin or Factor Xa cleavage site to liberate the mature peptide from their fusion proteins and a His-tag to aid in their purification. Stable integration …

Investigating Instructors' Conceptions Of Evolution Through The Development Of The Classroom Test Of Evolutionary Reasoning, Patricia Eileen Palko

Electronic Theses and Dissertations

In order to assess the evolutionary understanding of high school biology teachers, an instrument entitled the Classroom Test of Evolutionary Reasoning (CTER) was developed. Content, response process, relations to another variable (the Conceptual Inventory of Natural Selection, or CINS), and internal structure evidence were compiled. The second version of the CTER was found to have adequate reliability and validity estimates to allow it to continue to be used as a measurement tool for an understanding of evolution. When assessing a sample of teachers (n = 724), the mean score was 6.35 out of a possible 13 points. The sample was …