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Articles 31 - 60 of 1769

Full-Text Articles in Life Sciences

Functional And Microbial Consequences Of Experimental Evolution Under Starvation In Drosophila Melanogaster, Kristal Marie Aguilar-Conger Dec 2025

Functional And Microbial Consequences Of Experimental Evolution Under Starvation In Drosophila Melanogaster, Kristal Marie Aguilar-Conger

UNLV Theses, Dissertations, Professional Papers, and Capstones

Previous studies in the Gibbs lab have shown that starvation resistant Drosophila melanogaster flies have increased lipid content, lower metabolic rates, and poor physiological health. Historically, many evolutionary studies end at the phenotypic level, leaving the genomic basis largely unresolved. Using Evolve and Resequence (E&R) study, we can map genome-wide allele-frequency trajectories under selection, linking phenotypic shifts to their genomic underpinnings. This study utilized the E&R approach to identify enriched biological processes and pathways underlying starvation adaptation in Drosophila melanogaster. Five replicate restart populations (RS A–E) selected for starvation resistance, along with a control (RC), were resequenced at Generations 1, …


Applying Instrumental Neutron Activation Analysis (Inaa) To Characterize Trace Elements In Water Samples Around Lake Mead, Danesha Hunter Dec 2025

Applying Instrumental Neutron Activation Analysis (Inaa) To Characterize Trace Elements In Water Samples Around Lake Mead, Danesha Hunter

UNLV Theses, Dissertations, Professional Papers, and Capstones

Lake Mead, the largest reservoir in the United States is located on the boarder of Nevada and Arizona. Despite reaching historically low water levels, it continues to supply water and energy to millions of Americans in the southwest. It is well known that the United States suffers from negative implications from nationwide drought. The ongoing megadrought affecting the Colorado River Basin and its tributaries undergoes the urgent need to assess the future water quality of Lake Mead as it continues to shrink. With water levels depleting at an alarming rate, water quality is significantly impacted, indicating that heavy metal accumulation …


Geometric And Proximity Based Substrate Targeting By Cullin-Ring Ligases, Jerry Li Dec 2025

Geometric And Proximity Based Substrate Targeting By Cullin-Ring Ligases, Jerry Li

UNLV Theses, Dissertations, Professional Papers, and Capstones

Homeostasis, the process of maintaining stable biochemical and biophysical conditions, is a fundamental facet of cellular viability. Biochemical homeostasis is critical to support the biological functions that sustain living organisms. Protein ubiquitylation is one of the primary cellular pathways that regulate protein homeostasis and turnover. Ubiquitylation is initiated through the conjugation of a small globular protein known as ubiquitin, onto a given substrate. There exists a myriad of cellular fates that ubiquitylated proteins may undergo, but the most widely studied pathway is protein degradation, whereby a ubiquitylated protein substrate is shunted to a large macromolecular protease known as the proteasome, …


Deciphering The Crl Code: Novel Mechanisms Of Canonical And Non-Canonical Ubiquitylation, Nicholas Wayne Purser Dec 2025

Deciphering The Crl Code: Novel Mechanisms Of Canonical And Non-Canonical Ubiquitylation, Nicholas Wayne Purser

UNLV Theses, Dissertations, Professional Papers, and Capstones

Protein degradation is a fundamental process required for maintaining cellular homeostasis in eukaryotic organisms. In humans, distinct cell types exhibit unique proteomic landscapes that are dynamically balanced by the continual synthesis and degradation of proteins. The timely removal of damaged, misfolded, or old proteins is essential to permit new protein synthesis and to ensure proper cellular function.

Central to this regulatory network is ubiquitylation, a highly conserved posttranslational modification system that governs protein stability and function across all eukaryotic cells. Through the covalent attachment of ubiquitin molecules to protein substrates, this system modulates a broad range of biological processes, including …


Modeling The Mojave: A Multiphase, Mixed Methods Phenomenological Investigation Of Novice Understanding Of A Complex Ecological System, Nicole Juliana Thomas Dec 2025

Modeling The Mojave: A Multiphase, Mixed Methods Phenomenological Investigation Of Novice Understanding Of A Complex Ecological System, Nicole Juliana Thomas

UNLV Theses, Dissertations, Professional Papers, and Capstones

This research explores early college science majors’ conceptions of the Mojave Desert ecosystem as a complex system. A multi-level, explanatory sequential mixed methods design was employed to study college science majors’ understanding of the Mojave Desert ecosystem to better inform science pedagogy. The first level, the quantitative phase of the study, consisted of developing a mathematical representation of twelve ecosystem variables present within the Mojave Desert. The second level, the qualitative phase of the study, consisted of phenomenological semi-structured interviews with 23 early college science majors. The findings of this research suggest that the Mojave Desert operates as a complex, …


Enviromental Dna (Edna) Tools For Invasive Mosquitofish (Gambusia Affinis) Surveillance At The Shoshone Pupfish (Cyprinidon Nevadensis Shoshone) Refugium, Yusuf Olamilekan Umar Dec 2025

Enviromental Dna (Edna) Tools For Invasive Mosquitofish (Gambusia Affinis) Surveillance At The Shoshone Pupfish (Cyprinidon Nevadensis Shoshone) Refugium, Yusuf Olamilekan Umar

UNLV Theses, Dissertations, Professional Papers, and Capstones

Spring-fed aquatic ecosystems of the North American Southwest and U.S. Great Basin hosts a plethora of endemic fish species due to the effects of hydrologic fragmentation that resulted from Pleistocene aridification. Threats to endemic fishes worldwide include human intentional or unintentional release of exotic species into their habitats. Early detection of invasive species, while corrective actions are still possible, is critical for management, yet traditional survey methods are often disruptive to sensitive ecosystems, costly, and limited in sensitivity. The recent development of environmental DNA (eDNA) approaches offers powerful alternatives for invasive species monitoring in aquatic systems. In this study, a …


Fitness Changes, Dietary Practices And Sleep Quality In Non-Elite Through-Hikers: A Case Series, Cory J. Greever, Blayke Harrison, Holland Gaston, Anna Grexton, Dante Argento Dec 2025

Fitness Changes, Dietary Practices And Sleep Quality In Non-Elite Through-Hikers: A Case Series, Cory J. Greever, Blayke Harrison, Holland Gaston, Anna Grexton, Dante Argento

Topics in Exercise Science and Kinesiology

Topics in Exercise Science and Kinesiology Volume 6: Issue 1, Article 13, 2025. Through-hikes on long distance backpacking routes have the potential to both improve physical fitness and pose health risks. PURPOSE: To quantify changes in cardiorespiratory fitness and body composition, while recording dietary intake and sleep habits in a sample of through-hikers. METHODS: Participants completed two lab visits consisting of a maximal graded treadmill test and body composition assessments. Hiking volume, energy expenditure, sleep duration, and sleep staging were estimated during the hike using a smart watch. Participants kept a journal of all food and beverage intake. RESULTS: Over …


Knee Injury Prevention Program In An Early Pubertal Female Athlete During A Recreational Softball Season, Doug W. Dendy, Toby Brooks, C Roger James, Micah Lierly Dec 2025

Knee Injury Prevention Program In An Early Pubertal Female Athlete During A Recreational Softball Season, Doug W. Dendy, Toby Brooks, C Roger James, Micah Lierly

Topics in Exercise Science and Kinesiology

Topics in Exercise Science and Kinesiology Volume 6: Issue 1, Article 12, 2025. This case study was intended to analyze the impact of a knee injury prevention program (KIPP) for a young female athlete in a short recreational softball season. It was hypothesized that initiating a KIPP early within a recreational sports season would positively alter lower extremity biomechanics, subsequently reducing the risk of knee injuries during and after skeletal development. During a recreational softball season, a 13-year-old female athlete completed a preliminary biomechanical test, the drop vertical jump battery (DVJBpre), underwent a 7-week in-season KIPP, then was …


An Investigation Of The Characteristics And Uses Of School Farms In California Ffa’S Superior Region, Emily R. Fuller, Jessica M. Toombs Dec 2025

An Investigation Of The Characteristics And Uses Of School Farms In California Ffa’S Superior Region, Emily R. Fuller, Jessica M. Toombs

Journal of Research in Technical Careers

This study investigates the characteristics and uses of school farms within Northern California, focusing on their role in school-based agricultural education (SBAE). The research aims to determine the structural and operational attributes of these facilities and to identify their primary uses as experiential learning tools. Utilizing a descriptive survey design, data were collected from 74 agricultural educators. Findings reveal that school farms, averaging 21.27 acres, are predominantly managed by agriculture teachers and are primarily used for housing market animals, supporting Supervised Agricultural Experience (SAE) projects. The study highlights the need for diversified school farm facilities to enhance experiential learning across …


The Fitness Cost Of Rifampicin-Resistant Rpob Mutations On Mfd-Mediated Processes In Stationary Phase Bacillus Subtilis, Amber Callaway, Jessica Grifaldo Nov 2025

The Fitness Cost Of Rifampicin-Resistant Rpob Mutations On Mfd-Mediated Processes In Stationary Phase Bacillus Subtilis, Amber Callaway, Jessica Grifaldo

Undergraduate Research Symposium Posters

Rifampicin is a potent antibiotic that tightly binds to the ꞵ-subunit of RNA polymerase and blocks initiation of transcription. Bacillus subtilis cells that acquire rpoB mutations that confer resistance to rifampicin also exhibit decreases in transcription and fitness. Mutation frequency decline (Mfd) is a global transcription regulator that interacts with the ꞵ-subunit of RNA polymerase, and our RNA-seq showed that it had profound effects on the expression of motility genes. We hypothesize that the rifampicin-resistant rpoB: I681T mutation alters Mfd-mediated gene regulation of motility in Bacillus subtilis. Therefore, we will construct mfd- rpoB: I681T double mutants via natural competence and …


Dorsal/Ventral Orientation Of Dentate Granule Cells And Its Impact On Electrophysiology In Mice, Jacob Prince, Savannah Sampson, Alyssa Marron Nov 2025

Dorsal/Ventral Orientation Of Dentate Granule Cells And Its Impact On Electrophysiology In Mice, Jacob Prince, Savannah Sampson, Alyssa Marron

Undergraduate Research Symposium Posters

The hippocampus has known roles in memory formation, learning, and spatial mapping. There are defined physiological differences between CA1 neurons based on their dorsal to ventral position within the 3D hippocampus (Malik et al., 2015). Given the varying functions of the dorsal and ventral hippocampus in cognitive processing and the role of the dentate gyrus as the entry point for information into the hippocampus, it will be interesting to determine if there are differences in the properties of granule cells across the dorsal and ventral axis. We explore the potential topographic specialization of dentate granule cells. This study examines the …


Synthesis Of Disulfide Triazole Phosphorus Fire Retardant Via Photochemical Conditions, Jason Liu Nov 2025

Synthesis Of Disulfide Triazole Phosphorus Fire Retardant Via Photochemical Conditions, Jason Liu

Undergraduate Research Symposium Lightning Talks

The development of fire retardants is critical to enhancing fire safety and advancing fire science. The novel synthesis of a disulfide triazole phosphorus thiolacid fire retardant under photochemical conditions, along with relevant testing on plume generation performance, aims to answer our research goals.The proposed specific synthesis and conditions provide for a more efficient and environmentally greener route compared to conventional methods, utilizing photochemical click reactions. Furthermore, the addition of sulfur element to conventionally sole phosphorus-based FR reduces the chance of leaching by increasing the molecular weight of the compound and overcoming the obstacle of low molecular weight problems while also …


Design And Validation Of A Bilateral, Multi-Site 3d-Printed Neuronal Implant For Rodent Electrophysiology, Homero Phelps, Jonathan V. Trinidad, Talha Soluoku Nov 2025

Design And Validation Of A Bilateral, Multi-Site 3d-Printed Neuronal Implant For Rodent Electrophysiology, Homero Phelps, Jonathan V. Trinidad, Talha Soluoku

Undergraduate Research Symposium Podium Presentations

Neuronal electrophysiology implants are essential tools in neuroscience for recording brain activity and investigating neurological disorders. Our lab’s previous 3D-printed implant designs centered around a single-site, recording platform that was limited in adaptability, precision, and lacked in vivo validation due to lingering engineering malfunctions. To combat limitations and expand recording capabilities, this project aimed to design and validate a new implant capable of multi-site, bilateral recordings across both brain hemispheres, specifically targeting the hippocampus (CA1 and CA3) and anterior cingulate cortex (ACC), regions critical for learning and memory. Building on the Open Ephys ShuttleDrive model, the implant was redesigned using …


The Impact Of Food Insecurity On The Physical And Mental Health Of Food Service Workers And Their Households, Pedro Andrade Nov 2025

The Impact Of Food Insecurity On The Physical And Mental Health Of Food Service Workers And Their Households, Pedro Andrade

Undergraduate Research Symposium Posters

Food insecurity in the United States continues to be a persistent problem, as this household stressor has worsened in the past decade. The prevalence of food insecurity varies by demographic; however, income is a key factor when discussing food security status. One group experiencing food insecurity, but often overlooked when talking about solutions, is food service workers. This research sought to understand the impact of food insecurity on food service workers and their households. A literature review was conducted to gain a deeper understanding of the associations between food insecurity and physical health, mental health, household health, and occupational and …


Associations Between Gad-7 And Phq-9 Scores And Willingness To Seek Treatment, Josephine Shaw Nov 2025

Associations Between Gad-7 And Phq-9 Scores And Willingness To Seek Treatment, Josephine Shaw

Undergraduate Research Symposium Posters

In recent years, mental health concerns among college students have increased significantly. This study aims to analyze data on student willingness and frequency to seek counseling services, such as UNLV CAPS (Student Counseling and Psychological Services), and the appeal of utilizing alternative interventions such as exercise and meditation. This study collected data from UNLV students, faculty, and staff through distribution of a scannable QR code. It included whether they were in therapy, the PHQ-9 and GAD-7, their respective functional impairment questions, and willingness to consider therapy alternatives. Based on respondents’ answers to the PHQ-9, the highest proportion peaked at 36% …


Hawaiian Drosophila Host Plant Preferences, Kyrus Huang, Rodomir Stark Nov 2025

Hawaiian Drosophila Host Plant Preferences, Kyrus Huang, Rodomir Stark

Undergraduate Research Symposium Posters

Understanding how host plant availability influences behavior in Drosophila species provides valuable insight into ecological specialization and speciation. This study examines the effects of different host plants on the reproductive and oviposition behavior of Drosophila silvestris and Drosophila grimshawi. The primary objective of this project is to determine whether females exhibit host-plant preferences during egg-laying. A secondary aim is to assess whether sex and mating status influence host plant preference, specifically comparing male, unmated female, and mated female behavior with two host plants. To test these hypotheses, newly emerged flies were divided into three treatment groups: male-only, female-only, and mixed …


Effect Of Neuroinflammation On Exploratory Behavior In Mice, Gage Pompa, Ariana Mitic, Yader Gomez, Lilian Hagos, Orlando Montiel Nov 2025

Effect Of Neuroinflammation On Exploratory Behavior In Mice, Gage Pompa, Ariana Mitic, Yader Gomez, Lilian Hagos, Orlando Montiel

Undergraduate Research Symposium Posters

Introduction: Mice have been observed in both laboratory and field settings to exhibit a tendency to remain near corners and walls. This trait is known as positive thigmotaxis. Thigmotaxis has been recognized as a fundamental aspect of rodent behavior and used extensively as an anxiety index in mice. Although this characteristic has been recognized as a fundamental aspect of rodent behavior, thigmotaxis has been extensively studied in rectangular and circular environments. However, there is a notable lack of understanding of how alternative geometric configurations can influence this behavior.

Methods and Approach: Using a grid overlaid on the environment the mice …


Assessing How Early Vs. Late Exercise Influences Whole Body Glucose Tolerance And Insulin Signaling Pathways In Quadriceps During Social Jetlag, Ariana Khzarjyan, Austin Cooper, Paula Martinez, Joshua Corpuz, Srushti Wagh, Elias Malek, Todd Schrubb Nov 2025

Assessing How Early Vs. Late Exercise Influences Whole Body Glucose Tolerance And Insulin Signaling Pathways In Quadriceps During Social Jetlag, Ariana Khzarjyan, Austin Cooper, Paula Martinez, Joshua Corpuz, Srushti Wagh, Elias Malek, Todd Schrubb

Undergraduate Research Symposium Posters

BACKGROUND: Circadian rhythms regulate our physiological and metabolic processes throughout a 24-hour cycle. Disruptions to this rhythm with modern lifestyles creates irregular patterns. One of the most common forms of circadian rhythm disruptions amongst humans happens during the weekends, when people tend to stay up later and sleep in later compared to weekdays. This phenomenon is referred to as social jetlag (SJL).

PURPOSE: To determine whether timed exercise (early vs. late) can reduce the negative effects of social jetlag in mice. More specifically, determining whether exercise conducted in the early or late active phase of mice will impact the effects …


Single Vs. Whole Muscle Group Assessments: Does The Specific Muscle Influence Its Association With Performance?, Carina M. Velasquez, Kealey J. Wohlgemuth, Mckenzie M. Hare, Kathryn E. Southall, Jacob A. Mota Nov 2025

Single Vs. Whole Muscle Group Assessments: Does The Specific Muscle Influence Its Association With Performance?, Carina M. Velasquez, Kealey J. Wohlgemuth, Mckenzie M. Hare, Kathryn E. Southall, Jacob A. Mota

Topics in Exercise Science and Kinesiology

Topics in Exercise Science and Kinesiology Volume 6: Issue 1, Article 11, 2025. Biometric Muscle size and echo intensity are thought to influence muscle function. Unfortunately, previous works often will examine a single muscle from a group of agonists as a metric of whole muscle performance. This approach may not always be the most appropriate to assess performance outcomes. The purpose of the study was to 1) quantify the association of muscle size and echo intensity with vertical jump performance (VJ), 2) Compare the associations between individual and whole muscle group size and echo intensity, 3) determine whether single or …


Analyzing Surface Spectral Signature Shifts In Fire-Affected Areas Of Elko County Nevada, Ibtihaj Ahmad, Haroon Stephen Oct 2025

Analyzing Surface Spectral Signature Shifts In Fire-Affected Areas Of Elko County Nevada, Ibtihaj Ahmad, Haroon Stephen

Civil and Environmental Engineering and Construction Faculty Research

This study investigates post-fire vegetation transitions and spectral responses in the Snowstorm Fire (2017) and South Sugarloaf Fire (2018) in Nevada using Landsat 8 Operational Land Imager (OLI) surface reflectance imagery and unsupervised ISODATA classification. By comparing pre-fire and post-fire conditions, we have assessed changes in vegetation composition, spectral signatures, and the emergence of novel land cover types. The results revealed widespread conversion of shrubland and conifer-dominated systems to herbaceous cover with significant reductions in near-infrared reflectance and elevated shortwave infrared responses, indicative of vegetation loss and surface alteration. In the South Sugarloaf Fire, three new spectral classes emerged post-fire, …


Streamflow Reconstruction For The Upper Indus Basin, Syeda Saria Bukhary, Sajjad Ahmad Oct 2025

Streamflow Reconstruction For The Upper Indus Basin, Syeda Saria Bukhary, Sajjad Ahmad

Civil and Environmental Engineering and Construction Faculty Research

The sustainability of water resources in Pakistan faces mounting challenges due to population growth, climate change, and declining groundwater reserves. The Indus River, vital for the country’s agriculture, energy, and economy, suffers from limited instrumental discharge records that do not capture long-term hydrologic variability or extreme flow events. This study addressed this gap by developing streamflow reconstructions for the Upper Indus Basin (UIB) using tree-ring chronologies (TRC) combined with sea surface temperature (SST) data—an approach not previously applied in this region—for four discharge stations: Partab, Daniyor, Besham Qila, and Kachora. Stepwise linear regression models using TRC and SST predictors explained …


Evaluating Correlates Of Healthy Eating And Dietary Quality Among Older Adults: A Mixed Methods Approach To Development And Application Of A New Survey Instrument, Sara K. Rosenkranz, Donya Shamati, Anna Biggins, Alissa Mick, Christopher Acosta, Richard R. Rosenkranz Oct 2025

Evaluating Correlates Of Healthy Eating And Dietary Quality Among Older Adults: A Mixed Methods Approach To Development And Application Of A New Survey Instrument, Sara K. Rosenkranz, Donya Shamati, Anna Biggins, Alissa Mick, Christopher Acosta, Richard R. Rosenkranz

Kinesiology and Nutrition Sciences Faculty Research

Objectives: Community-dwelling older adults face unique challenges related to nutrition and health, but little is known about their barriers and facilitators for healthy eating behaviors. This study sought to develop and evaluate a new instrument to measure the capability, opportunity, and motivation for healthy eating behaviors (COM-HE) among community-dwelling older adults.

Design: A mixed methods approach was used to obtain qualitative and quantitative data. Participants were aged 65 years or older, community-dwelling, and English-speaking. Participants engaged in focus groups (n = 12) and pilot-testing (n = 81) to evaluate the COM-HE instrument. The Rapid Eating Assessment for Participants – Shortened …


A Case Series: Effectiveness Of Nintendo Ring Fit In Improving Balance And Stability Deficits After Recovery From Acl Reconstruction, Emma C. Lord, Melissa A. Tolbert, Whitley J. Stone Oct 2025

A Case Series: Effectiveness Of Nintendo Ring Fit In Improving Balance And Stability Deficits After Recovery From Acl Reconstruction, Emma C. Lord, Melissa A. Tolbert, Whitley J. Stone

Topics in Exercise Science and Kinesiology

Topics in Exercise Science and Kinesiology Volume 6: Issue 1, Article 10, 2025. This study aimed to assess the effectiveness of a gaming system in improving balance, strength, and power after recovery from an anterior cruciate ligament reconstruction (ACLR). Existing bilateral deficits were also assessed among patients.

Four participants between the ages of 18-24 years were recruited for this case-control study. Participants must have had an ACLR in the last 2 years, been discharged from formal physical therapy, and have a continued history of participating in physical activity at least three times a week. Participants were assigned to either the …


The Cost Of Malnutrition In Older Adults In The Mountain West, 2020, Taylor Volk, Anirudh Polagani, Olivia K. Cheche, Kristian Thymianos, Caitlin J. Saladino, William E. Brown Jr. Sep 2025

The Cost Of Malnutrition In Older Adults In The Mountain West, 2020, Taylor Volk, Anirudh Polagani, Olivia K. Cheche, Kristian Thymianos, Caitlin J. Saladino, William E. Brown Jr.

Health

This fact sheet presents 2020 data on the annual costs of disease-associated malnutrition for adults aged 65 years and older across the five Mountain West states of Arizona, Colorado, Nevada, New Mexico, and Utah. The data are sourced from “Advancing Policies for Quality Malnutrition Care in Older Adults: A Toolkit for State Legislators,” a report published by Defeat Malnutrition Today and Women in Government.


Effects Of Body Armor On Respiratory Muscle Fatigue And Muscle Blood Flow During Progressive Treadmill Marching, Kathryn Bell Aug 2025

Effects Of Body Armor On Respiratory Muscle Fatigue And Muscle Blood Flow During Progressive Treadmill Marching, Kathryn Bell

UNLV Theses, Dissertations, Professional Papers, and Capstones

Introduction: Torso-borne loads such as body armor are essential for modern military operations but impose mechanical and metabolic strain. These physiological stressors can trigger the inspiratory metaboreflex, which redirects blood flow from locomotor to respiratory muscles, further reducing muscle oxygen and endurance. While aerobic fitness has been shown to alleviate these effects, the interaction between sex, aerobic capacity, and oxygenation under load is not well understood. This study examined the physiological effects of torso-borne load carriage on respiratory muscle fatigue, skeletal muscle oxygenation, and exercise performance to volitional exhaustion and the degree to which sex and aerobic capacity influence these …


The Speech-To-Song Illusion Across Development And The Effects Of High-Level Expectations, Rodica R. Constantine Aug 2025

The Speech-To-Song Illusion Across Development And The Effects Of High-Level Expectations, Rodica R. Constantine

UNLV Theses, Dissertations, Professional Papers, and Capstones

The typical listener can readily categorize auditory stimuli as either speech or song even though these structures share many acoustic similarities. These musical and linguistic categories may nevertheless take time to develop as children acquire language- and music-specific knowledge. In the Speech-to-Song (STS) illusion, multiple repetitions of a natural spoken utterance can give rise to a perceptual switch wherein the stimulus begins to sound song-like to the listener. While the STS illusion has been well-researched in adult listeners, it had yet to be investigated in children. In our study, we examined whether children experience the STS illusion by presenting participants …


Rna’S Symphony: Harmonizing Splice Junctions And Exon Counts For A Novel Approach To Differential Splicing Analysis, Jelard Aquino Aug 2025

Rna’S Symphony: Harmonizing Splice Junctions And Exon Counts For A Novel Approach To Differential Splicing Analysis, Jelard Aquino

UNLV Theses, Dissertations, Professional Papers, and Capstones

Alternative Splicing (AS) plays a critical role in transcriptome complexity and cell-type-specific gene regulation, yet its analysis remains methodologically fragmented, especially in the context of noisy and sparse single-cell RNA sequencing (scRNA-seq) data. This dissertation addresses key computational challenges in AS detection by evaluating existing tools, developing integrative frameworks, and proposing new strategies for improving analysis accuracy in both bulk and single-cell contexts. In chapter 1, I present a comprehensive literature review of computational tools designed for detecting and quantifying AS from bulk and scRNA-seq data. This review outlines major methodological paradigms, including exon-based and splice junction-based approaches, and evaluates …


Hot Spring Associated Infectious Diseases In The Great Basin And Southwest, Matthew Bentz Aug 2025

Hot Spring Associated Infectious Diseases In The Great Basin And Southwest, Matthew Bentz

UNLV Theses, Dissertations, Professional Papers, and Capstones

Like all bodies of freshwater, natural hot springs can harbor pathogenic microorganisms that carry the threat of infectious disease. The unique chemistry, increased temperature, and popularity for bathing may alter the risk profile of hot springs compared to other natural bodies of water. Despite this risk, the role of hot springs as a reservoir for infectious diseases remains understudied, particularly within the context of regional public health. Nevada and the Great Basin/Southwest have increasingly promoted hot springs for the purposes of tourism, and they share a strong link to the cultural heritage of the region. The unknown risk profile and …


Morphological And Transcriptional Responses Of Mammalian Cells To Glucose Stress, Cassandra Burke Aug 2025

Morphological And Transcriptional Responses Of Mammalian Cells To Glucose Stress, Cassandra Burke

UNLV Theses, Dissertations, Professional Papers, and Capstones

Organismal cells encounter varying conditions, including daily and potentially seasonal fluctuations in available glucose. While some species tightly regulate circulating glucose levels, others tolerate extreme fluctuations, such as frugivorous bats experiencing post-prandial hyperglycemia and hibernating mammals maintaining stable glucose through torpor and hibernation. To investigate how these species-specific strategies influence cellular responses to glucose perturbation, primary dermal fibroblasts from nine mammals – humans, rats, Egyptian fruit bats, brown bear, 13-lined ground squirrel, little brown bat, gelada, honey badger, and Bactrian camel – were exposed to hypoglycemic (2.5mM), baseline (8mM), or hyperglycemic (30mM) treatment. Cell morphology was evaluated using Cell Painting, …


Empowering Science With The World's First High Accuracy And High Throughput Functional Assay, Christopher Giacoletto Aug 2025

Empowering Science With The World's First High Accuracy And High Throughput Functional Assay, Christopher Giacoletto

UNLV Theses, Dissertations, Professional Papers, and Capstones

Understanding the functional consequences of genetic mutations remains a central challenge in modern biology, with far-reaching implications for human health and disease. While early systematic methods like alanine scanning and phage display provided foundational insights into protein structure and function, the emergence of high-throughput approaches—such as Multiplexed Assays of Variant Effect (MAVEs)—and predictive tools powered by artificial intelligence have vastly expanded our ability to profile mutational landscapes. However, these methods are often constrained by trade-offs between accuracy, scalability, and biological relevance.This dissertation presents the development and application of the GigaAssay, the world’s first high-throughput functional assay capable of delivering both …