Life Sciences Commons^™

Fisheries Management Paper No.286: Western Australian Octopus Resource Harvest Strategy, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

Harvest strategies for Western Australia’s (WA) aquatic resources are formal documents developed to support decision-making processes that ensure the outcomes are consistent with the principles of Ecologically Sustainable Development (ESD; Fletcher 2002a) and Ecosystem Based Fisheries Management (EBFM; Fletcher et al. 2012). Harvest strategies are a key component of all contemporary fishery management systems and a requirement for certification under the Marine Stewardship Council (MSC). The objectives of ESD are reflected in the objectives of the Fish Resources Management Act 1994 (FRMA).

This Octopus Resource Harvest Strategy (Harvest Strategy) has been developed and revised in line with the Harvest Strategy …

Managing Herring In Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Fisheries and Aquaculture Factsheets

Following the recovery of the Australian herring stock in 2021, DPIRD formed the Australian Herring Future Management Working Group, made up of recreational and commercial representatives, to help us determine the best way forward for management of the species in WA.

Sheep Production, Profitability And Greenhouse Gas Emission Of Mixed Farming Systems In Western Australia's Wheatbelt, Tafesse Estifanos, Amir Abadi Abadi Ghadim, Kate Pritchett, Christophe D'Abbadie, Johnny Machon, Paul Mattingley, Bradley Plunkett, Gus Manatsa, Kerrine Blenkinsop, Ross Kingwell, Clinton K. Revell Dr

Animal production and livestock research reports

The south-western agricultural area of Western Australia is a vital contributor to Australia's agricultural output. It generates over $10 billion annually in agricultural production from 2017–18 to 2021–22 and more than $8 billion in export value over the same period. Mixed farming systems characterise the region, producing broadacre crops (primarily wheat, barley, and canola) and livestock. The region's livestock industry is dominated by sheep production for meat and wool, and the state’s share of the national sheep flock in 2020–21 was at 18%.

This report provides a comprehensive review and industry analysis of sheep production in WA, its economic significance, …

Marine Heatwave Conditions In Western Australia Marine Waters - 26th March 2025, Department Of Primary Industries And Regional Development, Western Australia

Marine Heatwave Notification Reports

Marine heatwave (MHW) conditions across the state have persisted. Category 1 – Moderate conditions continue for the Gascoyne and South Coast Bioregions. The North Coast Bioregion has returned to Category 1 – Moderate conditions. The West Coast Bioregion remains warm but is not categorised as experiencing MHW conditions.

Western Australia’S Marine Heatwave Update - 27 March 2025, Department Of Primary Industries And Regional Development, Western Australia, Arani Chandrapavan

Marine Heatwave Notification Reports

No abstract provided.

Hordeum I Genome Unlocks Adaptive Evolution And Genetic Potential For Crop Improvement, Hao Feng, Qingwei Du, Ying Jiang, Yong Jia, Tianhua He, Yibin Wang, Brett Chapman, Jiaxin Yu, Hiawen Zhang, Mengxue Gu, Mengwei Jiang, Shanshan Gao, Xinjie Zhang, Yameng Song, Vanika Garg, Rajeev K. Varshney, Jianhua Wei, Chengdao Li, Xingtan Zhang, Ruifen Li

Grain and Other Field Crops Research Articles

Crop wild relatives (CWRs) are invaluable for crop improvement. Among these, Hordeum I-genome species exhibit exceptional tolerance to alkali and salt stresses. Here we present a chromosome-scale genome assembly of Hordeum brevisubulatum (II, 2n = 2x =14) and genome resequencing of 38 diploid germplasms spanning 7 I-genome species. We reveal that the adaptive evolution of the H. brevisubulatum genome is shaped by structural variations, some of which may contribute to its adaptation to high alkali and salt environments. Evolutionary duplication of the stress sensor-responder module CaBP-NRT2 and the horizontally transferred fungal gene Fhb7 were identified as novel alkaline–saline …

Transcriptional Profiles Reveal Physiological Mechanisms For Compensation During A Simulated Marine Heatwave In Yellowtail Kingfish (Seriola Lalandi), Sharon E. Hook, Ryan J. Farr, Jenny Su, Alistair J. Hobday, Catherine Wingate, Lindsey Woolley, Luke Pilmer

Fisheries Research Articles

Background

Changing ocean temperatures are already causing declines in populations of marine organisms. Predicting the capacity of organisms to adjust to the pressures posed by climate change is a topic of much current research effort, particularly for species we farm or harvest. To explore one measure of phenotypic plasticity, the physiological compensations in response to heat stress as might be experienced in a marine heatwave, we exposed Yellowtail Kingfish (Seriola lalandi) to sublethal heat stress, and used the transcriptome in gill and muscle, benchmarked against heat shock proteins and oxidative stress indicators, to characterise the acute heat stress …

Self-Mustering Yards For Pastoral Livestock Management, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Self-mustering yards (SMYs) are an important component of effective total grazing management in the pastoral regions. These yards are used to self-muster cattle, sheep and goats, as well as native browsers and feral animals as they enter the yards to access the water point.

Citrus Fruits Maturity Parameters 2025-2026, Department Of Primary Industries And Regional Development, Western Australia

Viticulture research reports

Under Biosecurity and Agricultural Management (Agricultural Standards) Regulations 2013 Part 5.

Managing Lupin Sclerotinia: Know Your Risk And How To Respond, Ciara Beard, Geoff J. Thomas, Zia Hoque, Sarita Bennett, Pippa J. Michael, Rachael Crockett, Shannah Kanny, Montana Bradley

Grain and other field crops research reports

• Sclerotinia prevalence, particularly basal Sclerotinia (ground level infection) has increased significantly in Western Australia in the last five years. Since 2020, commercial crop surveys have found basal Sclerotinia more common in lupins than in canola, and it is difficult to manage.
• From 2021–2025 extensive research was conducted in the laboratory, glasshouse and field trials by research partners Department of Primary Industries and Regional Development (DPIRD), Centre for Crop Disease Management (CCDM), Mingenew Irwin Group (MIG) and lupin growers. Key new findings applicable to lupin growers are:
• Sclerotinia infects narrow-leaf lupin via two pathways: canopy and basal. Basal infection is more …

Marine Heatwave Conditions In Western Australia Marine Waters - 20 February 2025, Department Of Primary Industries And Regional Development, Western Australia

Marine Heatwave Notification Reports

Marine heatwave (MHW) conditions across all Bioregions of Western Australia have eased over the last two weeks. MHW status no longer applies to the majority of the North Coast and West Coast Bioregions. MHW conditions in the Gascoyne and South Coast Bioregion have eased to Category 1 - Moderate.

Western Australia’S Marine Heatwave Update - 16 February 2025, Department Of Primary Industries And Regional Development, Western Australia

Marine Heatwave Notification Reports

No abstract provided.

An Economic Analysis Of Cell-Fencing In Semi-Arid Rangelands, Stuart Dawson, Tracey L. Kreplins, Malcolm S. Kennedy, Santhi Wicks, Patricia A. Fleming

Biosecurity Research Articles

In Australia, livestock predation by dingoes (Canis familiaris) has contributed to what some livestock producers consider a dire situation for rangeland pastoralism, driving demand for cooperative regional-scale exclusion (‘cell’) fencing (i.e. pest-proof fences that encompass one or more individual properties) and landscape-scale predator control. The present case study predicted the effect of four cell-fences in the state of Western Australia (WA) on the gross margin of sheep (for meat or meat and wool) and cattle pastoral enterprises. We modelled the potential effects of the following four key variables: (1) four levels of commodity prices, (2) five levels of …

A Barley Pan-Transcriptome Reveals Layers Of Genotype-Dependent Transcriptional Complexity, Wenbin Guo, Miriam Schreiber, Vanda B. Marosi, Paolo Bagnaresi, Morten Egevang Jorgensen, Katarzyna B. Braune, Ken J. Chalmers, Brett Chapman, Viet Hoang Dang, Christoph Dockter, Anne Fiebig, Geoffrey B. Fincher, Agostino Fricano, John Fuller, Allison Haaning, Georg Haberer, Axel Himmelbach, Murukarthick Jayakodi, Yong Jia, Nadia Kamal, Peter Langridge, Chengdao Li

Grain and Other Field Crops Research Articles

A pan-transcriptome describes the transcriptional and post-transcriptional consequences of genome diversity from multiple individuals within a species. We developed a barley pan-transcriptome using 20 inbred genotypes representing domesticated barley diversity by generating and analyzing short- and long-read RNA-sequencing datasets from multiple tissues. To overcome single reference bias in transcript quantification, we constructed genotype-specific reference transcript datasets (RTDs) and integrated these into a linear pan-genome framework to create a pan-RTD, allowing transcript categorization as core, shell or cloud. Focusing on the core (expressed in all genotypes), we observed significant transcript abundance variation among tissues and between genotypes driven partly by RNA …

Exploring Single Cell Microbial Protein As A Sustainable Fishmeal Alternative In Yellowtail Kingfish (Seriola Lalandi) Diets: Impacts On Health And Gut Microbiome, Luke Pilmer, Lindsey Woolley, Alan Lymbery, Chinh Dam, Abigail Elizur, Md Javed Foysal, Gavin Partridge

Fisheries Research Articles

Background

With the global expansion of aquaculture and the increasing demand for fish meal, identifying appropriate and sustainable alternative protein sources for aquafeeds has become essential. Single-cell protein (SCP), derived from methanotrophic bacteria, presents a promising alternative by converting methane into protein, potentially addressing both the need for alternative protein sources and reducing industrial greenhouse gas emissions. This study aimed to evaluate the effects of different levels of SCP inclusion (0%, 25%, 50%, and 75% fish meal replacement) on the health, gene expression, and gut microbiome of yellowtail kingfish (YTK, Seriola lalandi) following a 35-day growth trial.

Results

The …

Marine Protected Species Identification Guide 2025, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

The Western Australian aquatic environment is home to a number of species that are protected under international agreements and national or state legislation. Many of these species occur in areas where fishing takes place, sometimes resulting in interactions between fishers and protected species. An interaction is considered to be any physical contact between a person, fishing vessel or fishing gear and a protected species, including captures, entanglements and collisions.

This guide has been developed to help you identify some common marine protected species in Western Australia that you may encounter while fishing.

It has been divided into 5 sections:

• …

Coverage Matters: Identifying And Mitigating Sampling Frame Issues In Recreational Fishing Surveys, Steve Taylor, Annica De Groote, Kieran Hyder, Jon Volstad, B W. Hartill, J Foster, R Andrews, Karina L. Ryan

Fisheries Research Articles

Surveys play an integral part in monitoring and maintaining sustainable recreational fisheries. For any probabilistic survey, the selection of a sampling frame (e.g., list of individuals or fishers) is an important decision because it influences the ability to provide unbiased estimates of recreational catch and effort. Undercoverage occurs when units of the target population (i.e., the population of interest) are missing from the frame population. This error can undermine the reliability of research advice generated from survey estimates. In this review, we: (i) define six sampling frame configurations that are commonly applied in probabilistic recreational fishing surveys; (ii) synthesise how …

Wa Insecticide Guide 2025 - Autumn Winter, Rebecca Severtson

PestFacts WA

Registered chemicals for broadacre crops in Western Australia.

The insecticides listed in the tables within this guide can be used on any crop appearing on the chemical label, if the rate used does not exceed the highest rate that is registered for use on that crop.

There are many products with different trade names that contain the same active ingredient. This list is not exhaustive and does not imply any specific recommendations of brand names.

Field Trials Report 2024: Wa Farming Systems Project (Daw2204-003rtx), Department Of Primary Industries And Regional Development, Western Australia

Farm Systems and Economics research reports

Within the Western Australian Faming Systems Project, a program of 11 field trials were conducted in 2024 from Ogilvie in the north to Wittenoom Hills in the south.

The season was a challenging one with a late break to the season at all sites and varying conditions from decile 3 to decile 10 growing season rainfall across the sites.

Marine Heatwave Response Plan For Western Australia’S Wild Capture Fisheries And Aquaculture, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

The purpose of the Western Australian wild capture fisheries and aquaculture marine heatwave response plan (the Plan) is to document the Department’s approach for identifying and responding to the hazard of a marine heatwave on wild catch fisheries (commercial, recreational, charter and customary) and aquaculture resources within the geographic boundaries of WA. It provides risk reduction strategies and establishes best-practice processes for each stage of the hazard management and response continuum, ensuring that DPIRD is able to adequately prepare for, respond to, and recover from marine heatwave events. This Plan operates in conjunction with WA’s existing aquatic resource management framework, …

Fisheries Research Report No. 345: Metropolitan Monitoring Program 2024, Alissa C. Tate, Claire B. Smallwood, Karina L. Ryan

Fisheries Research Reports

Ongoing monitoring of recreational fisheries in the Metropolitan zone is essential to ensure the sustainable use of fisheries resources. Surveys of shore- and boat-based recreational fishers within the Metropolitan zone of the West Coast bioregion provide information on human dimensions and catch-per-fisher as well as mean length and weight of key recreationally caught species. For shore-based fishers, estimates of fishing effort, catch and harvest are also presented for key nearshore species. Information in this report is used to support ongoing assessments for key nearshore species and inform the development and evaluation of harvest strategies and other management actions, such as …

Estimating The Carbon Footprint Of Sheep Production In Western Australia, Tafesse Estifanos, Christophe D'Abbadie, Johnny Machon, Amir Abadi Abadi Ghadim, Gus Manatsa, Paul Mattingley, Ross Kingwell, Kevin Foster

Farm Systems and Economics published reports

Western Australia’s broadacre mixed farming systems combine cropping and sheep production and are the largest component of the state’s agricultural sector. The south west Western Australia (WA) agricultural area hosts about 98% of the state's sheep flock. The sheep industry contributed $1.5 billion to the state’s economy in 2021-22 and accounts for about a quarter of on-farm greenhouse gas (GHG) emissions. Most sheep industry emissions (over 80%) come from methane produced by the sheep. Despite this environmental impact, only 9.9% of Australian sheep producers have estimated their emissions, which limits the industry's ability to monitor and manage carbon footprints effectively. …

Citrus Gall Wasp Control, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

Citrus gall wasp (Bruchophagus fellis) is an Australian native insect from northern NSW and Queensland and is now established in most Perth suburbs. It affects all citrus species, particularly lemons and grapefruit, and will be an ongoing pest to manage for Perth gardeners, like other common pests. It has not been found in commercial citrus orchards in Western Australia yet.

Fluke Egg Sedimentation Test Procedure, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

The department’s approved procedure for detecting trematode eggs and the Eimeria leuckarti sedimentation method (FEST) on faecal samples.

Skeleton Weed In Western Australia: 2025 Management Guide, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity bulletins

Skeleton weed can reduce crop yields by competing for moisture and nutrients (mainly nitrogen).

This guide helps you manage and eradicate skeleton weed infestations on your property, and helps to stop the spread across WA.

Without the coordinated program aimed at controlling the spread, skeleton weed would now be much more abundant and widely established throughout cereal growing areas.

If you find skeleton weed on your property, we can help you get rid of it.

Skeleton weed is unpredictable and can spread over long distances due to wind dispersal, but once identified it can be managed effectively and eradicated

Skeleton Weed In Western Australia: Control Program 2024–2025, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity bulletins

Key program changes

Winter eradication program

New herbicide recommendations for control in crops, legume based annual pastures, plantations and glyphosate tolerant canola.

• The minimum size of ‘squares’ (infested areas) has been reduced from 40 m x 40 m (0.16 ha) to 20 m x 20 m (0.04 ha) to help reduce the winter treatment area.
• Landholders will need to consult with DPIRD/LAG officers to assess the degree of infestation before working or cultivating through squares in Code 1 paddocks.
• Clopyralid (LontrelTM) herbicide will no longer be provided for treatment on heavily infested paddocks. Landholders will still be required to undertake …

Resource Assessment Report No. 01: Mid-West Scallop Resource 2024 Assessment, Jason How, Arani Chandrapavan, Rachel Marks

Resource Assessment Reports

The Mid-West Scallop Resource (Resource) is only accessed by the Abrolhos Islands Mid-West Trawl Managed Fishery (AIMWTMF). The AIMWTMF is the second largest scallop fishery in Western Australia. Access is limited to the 10 licences granted to access the Resource, which are managed through a range of, gear controls, catch rates and seasonal closures. They access saucer scallops, Ylistrum balloti (formerly Amusium balloti) using otter trawls fished over predominantly sand. The fishery was certified by the Marine Stewardship Council in 2021, with the fishery entering re-certification in 2026.

In 2024, 95.7 t meat weight (478.5 t whole weight) of saucer …

Transcription Factors – Insights Into Abiotic And Biotic Stress Resilience And Crop Improvement, Roopali Bhoite, Olive Onyemaobi, Tanushree Halder, Manisha Shankar, Darshan Sharma

Grain and Other Field Crops Research Articles

Numerous crop traits are controlled by multiple gene-networks. These gene-networks play a crucial role in crop evolution, disease prevention, stress adaptation and other fundamental processes in different organisms. Transcription factors (TFs) are master regulators of gene-networks and therefore have been targets for genetic improvement in crops since the dawn of agriculture. Enhancement of quantitative traits through plant breeding often involves manipulation of several TF sites and altered RNA expression. Advancements in OMICS technology have significantly expanded our understanding of transcription factor (TF) binding sites in plants and their roles in various biological processes. This progress has facilitated the validation of …

Regional Differences In Australian Export Grain Supply Chain Velocities And Their Implications, Ross Kingwell, Hemali Kanthilanka

Grain and Other Field Crops Research Articles

The size of grain harvests are increasing in most Australian states, enabling farmers to supply increasing volumes of grain to domestic and international customers. There is a market preference to supply international customers in the months prior to the availability of the northern hemisphere grain harvest that commences from June. To expedite export sales of Australian grain, most owners and operators of regional export grain supply chains in Australia are increasing their investments in the velocity, reliability, and capacity of their export grain supply chains. Larger volumes of Australian grain are now more rapidly exported. But what are the ramifications …

Farm Profit Impacts Of Consecutive Drought Years Under Climate Scenarios In Southwestern Australia, Sud Kharel, Kevin J. Foster, Meredith M. Guthrie, Ross Kingwell

Climate Science Research Articles

Climate projections for southern Australia indicate an increased likelihood of years of consecutive droughts. How resilient are farm businesses and their farming systems to recover from episodic drought? This study assesses the farm economic and financial impacts of consecutive droughts in southwest Australia. Bioeconomic simulation modelling of farm businesses with different farming systems at three locations is used to examine the long-term financial consequences of consecutive droughts. Various key factors affecting those consequences are examined. Farm location, farming system and starting equity are found to be the main determinants of how quickly a farm business can financially recover from the …