Life Sciences Commons^™

Western Australian Soil Groups - A Diagnostic Key To Identify Soils In Western Australia (5th Edition), Paul Galloway, Dennis Van Gool, Angela Stuart-Street, Edward A. Griffin, Shahab Pathan, Noel R. Schoknecht

Resource management technical reports

The aim of the Western Australian soil groups (WA soil groups) is to classify soils of Western Australia into a limited set using criteria that are easy to recognise in the field. It is a general-purpose classification with a focus on agronomic and rangeland grazing potential. The WA soil groups are designed for WA needs. It complements the Australian Soil Classification (ASC) by grouping the continuum of soils into a limited set of soil types, which simplifies soil variability for generalists, allows soil surveyors to create standardised soil-type legends for mapping products and permits further analyses of spatial data for …

Northern Great Plains Native Seed Strategy, Lora Perkins, Amy Symstad, Jennifer Zavaleta-Cheek, Emily Rohrer, Krista Ehlert

Native Plant Initiative Newsletters and Reports

Developed by the Northern Great Plains Native Seed Partnership

Draft Management Plan For The South Coast Scallop Managed Fishery, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

The Minister for Fisheries (Minister) intends to transition the South Coast Trawl Fishery (SCTF) to formal management by determining a management plan for the fishery in accordance with section 54(1) of the Fish Resources Management Act 1994 (FRMA).

Section 54(1) of FRMA provides for the Minister to determine by instrument in writing published in the Government Gazette, a management plan for a fishery. Not less than two months prior to determining a management plan, the Minister must, in accordance with section 64(2) of FRMA, prepare a draft of the plan and by notice in the Gazette, state their intent to …

Leveraging High-Frequency Water Quality Data And Machine Learning For Monitoring Harmful Algal Blooms, Ibrahim Busari

All Dissertations

Freshwater management is one of the most critical resources on the earth due to the plethora of water use and its limited availability. Increased algae proliferation is one of the significant problems of freshwater bodies that is triggered by nutrient enrichment and enabling conditions such as light and warm temperatures. This algal proliferation is toxic to the ecosystem through their biomass and potential toxin production that can cause hypoxic conditions and is often referred to as Harmful Algal Blooms (HABs). Current monitoring approaches include laboratory analysis of water samples to observe algal cells, monitoring of water quality parameters using water …

Environmental Dna Identifies Coastal Plant Community Shift 1,000 Years Ago In Torrens Island, South Australia, Nicole R. Foster, Alice R. Jones, Oscar Serrano, Anna Lafratta, Paul S. Lavery, Kor-Jent Van Dijk, Ed Biffin, Bronwyn M. Gillanders, Jennifer Young, Pere Masque, Patricia S. Gadd, Geraldine E. Jacobsen, Atun Zawadzki, Andria Greene, Michelle Waycott

Research outputs 2022 to 2026

Anthropogenic activities are causing detrimental changes to coastal plants– namely seagrass, mangrove, and tidal marshes. Looking beyond recent times to past vegetation dynamics is critical to assess the response and resilience of an environment to change. Here, we develop a high-resolution multi-proxy approach, providing a new evidence base to decipher long-term change in coastal plant communities. Combining targeted environmental DNA analysis with chemical analysis of soils, we reconstructed 4,000 years of change at a temperate wetland on Torrens Island South Australia and identified an ecosystem shift that occurred ~ 1000 years ago. What was once a subtidal seagrass system shifted …

Phytoplankton Responses To Changing Irradiance And Carbon Fertilization, Alison Siersma

Graduate Theses and Dissertations (2019 - present)

Phytoplankton play a crucial role in marine ecosystems due to their innate ability to fix carbon. As atmospheric CO2 levels continue to rise from fossil fuel combustion, the resulting increase in dissolved CO2 and the concurrent decrease in ocean pH are likely to impact the phytoplankton community. The response of phytoplankton to elevated CO2 can vary significantly among species and environmental conditions (e.g. light, temperature, nutrient availability). To address these variations, an experiment was conducted using a controlled photobioreactor system, maintaining high and low light, constant temperature, nutrient levels, and two pCO2 concentrations. This study focused on two regionally relevant …

Effect Of Integrated Crop–Livestock Systems On Soil Properties And Microbial Diversity In Soybean Production, Namita Sinha, Brett R. Rushing, Aniruddha Acharya, Shankar Gaapathi Shanmugam

Faculty Publications - Biological Sciences

Integrated crop and livestock systems (ICLSs) have been considered an important management-based decision to improve soil health by carbon sequestration. A two-year study (2019–2021) at CPBES in Newton, MS, was conducted to evaluate the effect of an ICLS on soil microbial diversity in the southeastern region of the USA, representing agroclimatic conditions that are warm and humid. Amplicons targeting bacterial 16S rRNA genes and fungal ITS2 regions were sequenced. Taxonomic assignment and characterization of microbial diversity were performed using QIIME2®. Soil fungal diversity pattern showed significant difference (alpha diversity, p = 0.031 in 2020 and beta diversity, p = 0.037 …

Analyzing Food Sources And Food Insecurity Of Kichwa Farming Families In The Ecuadorian Amazon, Reina Watanabe

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

While the right to food is internationally recognized and the United Nations established the sustainable development goal to end hunger and achieve food security by 2030, many households remain without consistent access to food in 2024. In Latin America, approximately 4 in 10 households were reported as food insecure in 2020 with higher rates in rural and indigenous communities. Rural areas, which have great overlap with indigenous communities in Ecuador, experience disproportionately high levels of poverty and food insecurity compared to urban areas. The most populous indigenous nationality in the Ecuadorian Amazon and the participants of this study are the …

Informing Management Of American Shad (Alosa Sapidissima) In The Carolinas: Evaluating Novel Fish Passage Approaches And Acoustic Tracking Methods, Margaret Gaither

All Theses

Acoustic telemetry is a valuable tool for fisheries scientists to study the movements and migratory behaviors of aquatic organisms. A critical assumption of this method is that tagged fish exhibit similar behaviors and survival rates as their untagged counterparts. To investigate this, we conducted a 12-week laboratory study on adult American Shad (Alosa sapidissima) using gastroesophageal insertion of acoustic transmitters. We implanted 80 fish with dummy transmitters and monitored tag retention and survival. Our analysis, employing a mixed effects Cox’s proportional hazards model, revealed no significant differences in survival between tagged and control fish, regardless of sex. Additionally, …

Recreational Fishing For Western Rock Lobster: Estimates Of Participation, Effort And Catch In 2023/24, Claire B. Smallwood, Karina L. Ryan, Alissa C. Tate

Fisheries Research Reports

The Western Rock Lobster (WRL) (Panulirus cygnus) is the most commonly caught Rock Lobster (RL) species in Western Australia. Catches from the commercial and recreational sectors are required to determine and monitor Total Allowable Commercial Catch (TACC), Total Allowable Recreational Catch (TARC) and the proportion of Allowable Harvest Level (AHL) achieved. The TARC is set at 5% of the AHL and evaluated in the harvest strategy based on a 5-year average.

Data for the recreational sector are obtained using phone-recall surveys to provide annual estimates of participation, fishing effort and retained catch (by numbers) from recreational fishers who hold a …

Rice Response To Struvite And Other Phosphorus Fertilizers In A Phosphorus-Deficient Soil Under Simulated Furrow-Irrigation, Jonathan B. Brye, Diego Della Lunga, Kristofor R. Brye

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

Wastewater-recovered phosphorus (P), in the form of the mineral struvite (MgNH₄PO₄⋅6H₂O), may provide a sustainable alternative to decreasing rock-phosphate reserves. Struvite can be generated via precipitation methods, potentially reducing the amount of P runoff to aquatic ecosystems. The objective of this greenhouse tub study was to evaluate the effects of chemically- and electrochemically precipitated struvite (CPST and ECST, respectively) on above- and belowground plant response in a hybrid rice (Oryza sativa) cultivar grown using furrow-irrigation compared to other common fertilizer-P sources [i.e., triple super phosphate (TSP) and diammonium phosphate (DAP)]. Rice was …

Spatial Ecology Of American Bison On Vermejo Park Ranch, New Mexico, Kate Ann Asmus

School of Natural Resources: Dissertations, Theses, and Student Research

American bison (Bison bison) are a keystone species that impact grassland productivity, plant diversity, and landscape heterogeneity. We used GPS telemetry and a replicate herbivore grazing experiment on Vermejo Park Ranch in northeastern New Mexico to advance understanding of bison spatial ecology and grazing dynamics. First, we evaluated the potentially disparate influences of forage productivity and site fidelity on the size and selection of home ranges of bison. Home range size was strongly negatively influenced by forage productivity. However, home range selection was influenced more strongly by site fidelity than spatial variation in forage, as bison selected home …

Investigating Nekton Response To Changing Salinities In The Mississippi Sound: An Experimental And Statistical Approach, Adam Murray

Master's Theses

The Mississippi Sound provides nursery habitats for many coastal species and is recognized for its commercial fisheries. Previous freshening events linked to the Bonnet Carré Spillway, a Mississippi River flood diversion structure, proved catastrophic for oyster populations in the Mississippi Sound, but effects on mobile fish and shellfish species are not well-defined. The planned Mid-Breton Sediment Diversion (MBSD), an initiative to combat wetland loss, is also forecasted to lower salinities in the region, increasing the need to better understand responses of commercially and ecologically important species to freshening events. The objective of this study was to characterize effects of salinity …

Understanding The Influence Of Traffic And Noise On The Wildlife Community Surrounding Fm106 And Sh100 In South Texas, Anna Rose Mehner

Theses and Dissertations

In South Texas, highways create landscape fragmentation, habitat degradation, and result in wildlife vehicle collisions. Vehicle collisions are the highest known cause of mortality of the endangered ocelot (Leopardus pardalis), which led Texas Department of Transportation to install nine wildlife crossing structures (WCS) on Farm-to-Market 106 and five on State Highway 100. These highways are along Laguna Atascosa National Wildlife Refuge, which is the location of the southernmost breeding population of ocelots in the United States. Many other wildlife species including bobcat (Lynx rufus) and coyote (Canis latrans), are present along these highways and …

Structure Modifications And Alternative Monitoring Designs Of Wildlife Road Mitigation Structures, Madison T. Nadler

Theses and Dissertations

Wildlife mitigation structures are designed to keep animals off roadways while providing them safe passage to the other side and not impeding traffic flow. Camera traps are commonly used to assess the success of these mitigation structures, but there are downfalls to both the methods and structures. Alternative mitigation structure designs are needed to better prevent wildlife from accessing roadways in areas where they should be deterred. Additionally, traditional camera trapping methods do not accurately capture the full wildlife communities that may be utilizing these structures and other survey methods are needed, specifically aimed at small mammals, amphibians, and reptiles. …

Guiding Wildlife: Evaluating Wildlife Exit Designs And Sensor Lights For Safer Highways In South Texas, Rupesh Maharjan

Theses and Dissertations

Roadside exclusionary fencing is more prevalent on highways to prevent wildlife-vehicle collisions. Although it can mitigate wildlife road mortality by limiting their access to the road, it can also create a barrier for wildlife stranded within the right-of-way. In State Highway 100 of Texas, the Texas Department of Transportation installed ten wildlife exits to allow wildlife to escape the fenced roadway, and a pair of sensor lights on 13 wildlife guards (WGs) to scare off target species (bobcats and coyotes) from crossing the guards and accessing the roadway. In this study, the effectiveness of three wildlife exit (WE) designs were …

Examining Hispanic Beginning Farmers And Ranchers In The Rio Grande Valley Through A Community Capitals Framework, Perla Kimberly Schrock

Theses and Dissertations

While existing literature addresses the experiences of beginning farmers and ranchers (BFR), there is a notable gap in research focused on Hispanic beginning farmers and ranchers (HBFR). This study aimed at exploring the unique experiences of HBFR in a predominantly Hispanic region, the Rio Grande Valley (RGV), employed the Community Capitals Framework (Flora et al., 2016). I conducted 16 semi-structured interviews with HBFR and local nonprofit organizations and federal employees, complemented by participant observations. Through thematic and content analysis of the interview transcripts, findings revealed valuable insights into the livelihoods of HBFR. Despite HBFR facing significant challenges, this study demonstrated …

Redefining Approaches For Measuring Landscape Subsidence And Permafrost Degradation In Arctic Tundra Environments, Tabatha Lynn Fuson

Open Access Theses & Dissertations

As climate change accelerates in the Arctic, the degradation of permafrost is leading to significant landscape transformation in tundra landscapes. This dissertation investigates the multifaceted responses of permafrost systems to warming, focusing on the dynamics of surface elevation changes and active layer thickness (ALT) across the North Slope of Alaska. In this study, I explore the capacity of repeat Terrestrial Laser Scanning (TLS) technology for modeling tundra features and detecting surface subsidence, specifically how different climate and landscape conditions during scanning impact TLS model precision. We also compare TLS model precision estimates to TLS model accuracy by comparing elevation values …

Quantifying Greenhouse Gas Exchange And Ecosystem Services In Ecosystems Managed For Nature-Based Solutions Using Eddy Covariance, Remote Sensing, And Models, Lucas Clay

All Dissertations

As global temperatures rise due to climate change, nature-based solutions are increasingly being used to restore nature and to remove carbon from the atmosphere. Nature-based solutions draw on methodologies such as ecological forestry and improved forest management to reduce emissions and maximize resilience. These protocols are still in their infancy and additional measurements and case studies are important to optimizing these protocols. Herein this dissertation we describe multiple measurement methodologies for both greenhouse gas (GHG) emissions and for ecosystem services. In coastal wetland ecosystems, the need for GHG measurements is paramount to understanding the ability of these ecosystems to reduce …

The Impact Of Wild Pigs (Sus Scrofa) On Avian Occupancy And Vegetation Structure, Kenneth Wilson

Graduate Theses and Dissertations

Invasive species, particularly wild pigs (Sus scrofa), pose a significant threat to native ecosystems through both direct and indirect impacts. Wild pigs are large-bodied omnivorous species that can consume a wide variety of plants and animals and are known for destructive foraging behaviors, which likely threatens avian communities through habitat alteration and can impact the long term structure of ecosystems where they are present.

In chapter 1, we used a combination of avian point count surveys, vegetation assessments, and camera trap surveillance to quantify how the occupancy of breeding birds in bottomland hardwood forests changed in relation to …

The Relationship Between Salvinia Molesta Infestation And The Microbial Ecology Of Wetlands At Caddo Lake, Tx, Usa, Martin Hadsell

Electronic Theses and Dissertations

Wetlands are known to host many beneficial geochemical processes such as nutrient cycling and carbon sequestration. These processes are primarily driven by the microbial communities within a wetland. The establishment of non-native invasive species within wetlands has the potential to alter the once beneficial functionality of wetland microbial communities due to the sensitivity microbes have towards environmental changes. Because of this, several metagenomic studies have been conducted to assess microbial community response to aquatic plant invasion; however, there haven’t been any studies researching the influence of Salvinia molesta (D.S. Mitch.), commonly known as Giant Salvinia, on microbial communities. The goal …

A Mathematical Model For Mapping The Insecticide Resistance Trend In The Anopheles Gambiae Mosquito Population Under Climate Variability In Africa, Komi Mensah Agboka, Mark Wamalwa, James Mutuku Mutunga, Henri E.Z. Tonnang

All Peer-Reviewed Publications

The control of arthropod disease vectors using chemical insecticides is vital in combating malaria, however the increasing insecticide resistance (IR) poses a challenge. Furthermore, climate variability affects mosquito population dynamics and subsequently IR propagation. We present a mathematical model to decipher the relationship between IR in Anopheles gambiae populations and climate variability. By adapting the susceptible-infected-resistant (SIR) framework and integrating temperature and rainfall data, our model examines the connection between mosquito dynamics, IR, and climate. Model validation using field data achieved 92% accuracy, and the sensitivity of model parameters on the transmission potential of IR was elucidated (e.g. μPRCC = …

Long-Term Push–Pull Cropping System Shifts Soil And Maize-Root Microbiome Diversity Paving Way To Resilient Farming System, Abdul A. Jalloh, Fathiya Mbarak Khamis, Abdullahi Ahmed Yusuf, Sevgan Subramanian, Daniel Munyao Mutyambai

All Peer-Reviewed Publications

Background: The soil biota consists of a complex assembly of microbial communities and other organisms that vary significantly across farming systems, impacting soil health and plant productivity. Despite its importance, there has been limited exploration of how different cropping systems influence soil and plant root microbiomes. In this study, we investigated soil physicochemical properties, along with soil and maize-root microbiomes, in an agroecological cereal-legume companion cropping system known as push–pull technology (PPT). This system has been used in agriculture for over two decades for insect-pest management, soil health improvement, and weed control in sub-Saharan Africa. We compared the results with …

Biological Reinforcement Learning Simulation For Natural Enemy -Host Behavior: Exploring Deep Learning Algorithms For Population Dynamics, Komi Mensah Agboka, Emmanuel Peter, Erion Bwambale, Bonoukpoè Mawuko Sokame

All Peer-Reviewed Publications

This study introduces a simulation of biological reinforcement learning to explore the behavior of natural enemies in the presence of host pests, aiming to analyze the population dynamics between natural enemies and insect pests within an ecological context. The simulation leverages on Q-learning, a reinforcement learning algorithm, to model the decision-making processes of both parasitoids/predators and pests, thereby assessing the impact of varying parasitism and predation rates on pest population growth. Simulation parameters, such as episode count, duration in months, steps, learning rate, and discount factor, were set arbitrarily. Environmental and reward matrices, representing climatic conditions, crop availability, and the …

A Nursery Study Of The Interplay Between Soil Texture, Rooting Space, And Nurse Plants On Seedling Growth And Root Development In Woody Species Of Tamaulipan Thornscrub, Lance I. Santos

Theses and Dissertations

Reforestation attempts in semi-arid regions are plagued with seedling mortality. Blanket greenhouse practices may not be optimal, in addition, commensalism interactions between nurse plants are considered. To better understand the effects of soil texture and nurse plant interactions on growth and drought tolerance, two experiments were developed. For soil texture, Border palo verde seedlings were grown in different-sized plant bands with three soil types. To observe the effects of nurse plants, an experiment using guayacan, was developed using Texas Ebony, as a leguminous nurse plant. Plants were also exposed to a drought experiment. The results suggest that some soil textures …

Time Series Decomposition Of Land Surface Temperature For Long-Term Trend Forecasting And Impact On Nesting Sea Turtle Habitats In The Arabian Gulf, Sachi Perera, Rommel H. Maneja, Mohamed Allali, Cyril Rakovski, Erik Linstead, Daniele Struppa, Ali Qasem, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Improving land surface temperature (LST) modeling is vital for mitigating climate change effects on various ecosystems and marine habitats such as important sea turtle habitats. Over the past decade, extreme temperatures have likely significantly affected nesting sea turtle habitats in the Arabian Gulf, with predominantly female hatchlings creating an imbalance in the sex ratio. Such shifts have profound implications for these habitats’ long-term survival and conservation management. This study leverages statistical machine learning models to measure ongoing temporal variations in LST. We break down the LST time series into trend, seasonal, and noise components using classical decomposition methods like X11, …

Understanding Mechanisms For Coastal Marsh Sustainability In A Changing Climate, Ashley R. Booth

LSU Doctoral Dissertations

In the Chenier Plain of Louisiana and Texas, coastal marshes are subject to high rates of relative sea level rise (RSLR), restricted sedimentation, and declining elevation attributed to subsidence and decades of intensive management. These marshes were created via mineral sedimentation but now largely accrete via organic matter accumulation. This organic matter accumulation (OMA) – or the balance between plant productivity and decomposition – is essential for maintaining elevation and thus long-term sustainability. However, management for elevation is complicated by a poor understanding of how abiotic factors like flooding and salinity impact processes driving OMA and elevation. To better understand …

Efficacy Of Banana Fibre Paper For The Management Of The Root-Knot Nematode, Meloidogyne Incognita, On Potato (Solanum Tuberosum) In Kenya, Dorris W. Kamau, Wanjohi Waceke, Laura Cortada, Onesmus Mwaura, Tahira Pirzada, Tim L. Sit, Eric Davis, Dick Guenther, Reny Mathew, Lokendra Pal, Saad Khan, Solveig Haukeland, James Kisaakye, Charles Opperman, Danny Coyne

All Peer-Reviewed Publications

Globally, potato (Solanum tuberosum) is a key staple food crop. In Kenya, it is the second most important food crop after maize. Among the various constraints to potato production are plant-parasitic nematodes. In particular, root-knot nematodes (Meloidogyne spp.) are a significant impediment to potato production, suppressing yield and reducing the quality of harvested tubers. The current study was undertaken to evaluate the efficacy of a lignocellulose fibre matrix (banana paper) either impregnated with a chemical or drenched with a biologically-based nematicide for the management of root-knot nematodes on potatoes, in Kenya. The experiment was conducted in both field and pot …

Red Harvester Ants Pogonomyrmex Barbatus (Smith, 1858) (Hymenoptera: Formicidae) Do Not Distinguish Between Sorghum Head Mold Symptomatic And Asymptomatic Seeds, Lilly Victoria Elliott-Vidaurri, Hannah J. Penn, Robin A. Choudhury

School of Earth, Environmental, & Marine Sciences Faculty Publications

Red harvester ants, Pogonomyrmex barbatus (Smith, 1858) (Hymenoptera: Formicidae), common in the Lower Rio Grande Valley of Texas, are known to gather seeds from areas around their nests and store the seeds inside their nests for later consumption. As these ants often nest in and near agricultural fields, some of these seeds may be from crops and may also be infected with fungal plant pathogens. These pathogens can degrade seed coats and may cause the seeds to rot within the ant nests, decreasing storage time and potentially spreading the pathogen to other stored seeds. We studied how head mold, a …

Changing Characteristics Of Land Cover, Landscape Pattern And Ecosystem Services In The Bohai Rim Region Of China, Jiaqi Liu, Wei Chen, Hu Ding, Zhanhang Liu, Min Xu, Ramesh P. Singh, Congqiang Liu

Mathematics, Physics, and Computer Science Faculty Articles and Research

Since the Anthropocene, ecosystems have been continuously deteriorating due to global climate change and human intervention. Exploring the changing characteristics of land use/land cover (LULC), landscape pattern and ecosystem service (ES) and their drivers is crucial for regional ecosystem management and sustainable development. Taking the Bohai Rim region of China as an example, we used the land use transfer matrix, landscape pattern index and InVEST model to analyze the changing characteristics of LULC, landscape pattern and six key ESs [crop production (CP), water yield (WY), carbon storage (CS), soil conservation (SC), habitat quality (HQ), landscape aesthetics (LA)] during 2000–2020. Detailed …