Life Sciences Commons^™

The Impacts Of Urbanization On Soil: The Effect On Decomposition Rates And Microbial Communities, Maximus C. Halekakis

DePaul Discoveries

The anthropogenic impacts of industrialization have left many ecosystems polluted. Soil, being an imperative actor for ecosystem functions, is important to observe under anthropogenic change. My study examined soil organic matter decomposition, microbial biomass carbon(MBC) and the fungal to bacteria ratio(F:B) across an urban-suburban-exurban landuse gradient in San Luis Obispo, California. A cotton strip assay as well as microBIOMETER® testing was performed on three geographic locations in and outside of the city. The cotton strip decomposition acts as an indicator for organic matter breakdown as microorganisms break down the cellulose in the strips causing them to lose mass and tensile …

The Growth Of Ethanol In Brazil: Sugarcane, Corn, And A Few Other Things, Fabio Mattos

Cornhusker Economics

Although we can expect more ethanol produced from corn in the coming years, it is unclear whether it will keep expanding at the same pace as in recent years or how much it will contribute to total ethanol production.

One point to keep an eye on is the typical dynamics of markets. If supply and demand conditions and price movements make corn-ethanol more profitable, ethanol plants in Brazil will keep increasing their production. If it makes more economic sense to produce corn-ethanol (as it happened recently), they will use more corn to produce ethanol.

Supply and demand conditions for ethanol, …

Agenda De Investigación Para El Manejo Sustentable Del Manglar En Tamaulipas, México [Research Agenda For The Sustainable Management Of Mangroves In Tamaulipas, Mexico], Carlos Zamora-Tovar, Alejandro Fierro-Cabo, Glenda Nelly Requena-Lara

School of Earth, Environmental, & Marine Sciences Faculty Publications

Se presenta un análisis de la información ecológica disponible sobre los manglares de Tamaulipas, México. El objetivo fue establecer una línea base de conocimiento que defina el estado del arte a partir de la información publicada; actualizar la estructura forestal con datos propios observados en el año 2018; y determinar una agenda de investigación prioritaria para el manejo sostenible del ecosistema de man-glar, ecosistema de vital importancia por la gran variedad de recursos y servicios ambientales que aporta a la sociedad. La investigación bibliográfica recopiló 32 trabajos relevantes: 16 publicaciones formales, siete ediciones institucionales y nueve consideradas literaturas gris; recopilación …

Phylogenomics Recovers Multiple Origins Of Portable Case Making In Caddisflies (Insecta: Trichoptera), Nature's Underwater Architects, Paul B. Frandsen, Ralph W. Holzenthal, Marianne Espeland, Jesse Breinholt, Jessica A. Thomas Thorpe, Sabrina Simon, Akito Y. Kawahara, David Plotkin, Scott Hotaling, Yiyuan Li, C. Riley Nelson, Oliver Niehuis, Christoph Mayer, Lars Podsiadlowski, Alexander Donath, Bernhard Misof, Emily Moriarty Lemmon, Alan Lemmon, John C. Morse, Shanlin Liu, Steffen U. Pauls, Xin Zhou

Watershed Sciences Faculty Publications

Caddisflies (Trichoptera) are among the most diverse groups of freshwater animals with more than 16 000 describes species. They play a fundamental role in freshwater ecology and environmental engineering in streams, rivers and lakes. Because of this, they are frequently used as indicator organisms in biomonitoring programmes. Despite their importance, key questions concerning the evolutionary history of caddisflies, such as the timing and origin of larval case making, remain unanswered owing to the lack of a well-resolved phylogeny. Here, we estimated a phylogenetic tree using a combination of transcriptomes and targeted enrichment data for 207 species, representing 48 of 52 …

A Comparative Analysis Of Openet For Evaluating Evapotranspiration In California Almond Orchards, Kyle Knipper, Martha Anderson, Nicholas Bambach, Forrest Melton, Zac Ellis, Yun Yang, John Volk, Andrew J. Mcelrone, William Kustas, Matthew Roby, Will Carrara, Sebastian Castro, Ayse Kilic, Joshua B. Fisher, Anderson Ruhoff, Gabriel B. Senay, Charles Morton, Sebastian Saa, Richard G. Allen

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The almond industry in California faces water management challenges that are being exacerbated by droughts, climate change, and groundwater sustainability legislation. The Tree-crop Remote sensing of Evapotranspiration eXperiment (T-REX) aims to explore opportunities to improve precision irrigation management for woody perennial cropping systems. Almond orchards in the California Central Valley were equipped with eddy covariance flux measurements to evaluate satellite remote sensing-based evapotranspiration (RSET) models. OpenET provides high-resolution (30-m spatial and daily temporal) RSET data, synthesizing decades of research for practical water management. This study provides an evaluation of OpenET performance at six almond sites covering a large range in …

The Fishing Cat: New Insights On Distribution In The Northern Sector Of Chitwan National Park, Nepal, Rupesh Maharjan, Rama Mishra, Jhamak Bahadur Karki

School of Earth, Environmental, & Marine Sciences Faculty Publications

Fishing cat Prionailurus viverrinus (Bennett, 1833) is an elusive and medium-sized feline species with distinguished marking patterns on their head and body separating them from other feline species. Despite being distributed widely among diverse geographic locations, their abundance has declined due to significant habitat loss and human disturbances. There exists a substantial research gap regarding their abundance and distribution in Nepal. In this article, we presented the updated documentation of the fishing cat distribution in the northern sector of Chitwan National Park through our species-focused camera trapping survey. The study was carried out between April and May 2021 with a …

National Parks Field Journal, Isadora Davis

Art and Design Student Scholarship and Projects

A handwritten, richly illustrated field journal by Binghamton University art major Isadora Davis, recording a trip through national parks in the American West via SUNY Broome's BIO 217: Ecology of National Parks. Davis uses colored pencil drawings and pressed botanical specimens to record landscapes, birds, mammals, and plant life in Grand Teton, Yellowstone, Wind Cave, and Badlands National Parks, as well as Custer State Park. Davis's sketches and diagrams visually explore how to decode past landscapes from current formations, while her written entries explain species diversity, animal behavior, and the mechanisms causing geological formations and geothermal events. Part memoir of …

Exploring Producers' Willingness To Pay For Ecosystem Services: Three Essays On Soil Health, Location Preferences, And Cover Crop Adoption, Kaouter Essakkat

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

This dissertation comprises three essays: one assessing Midwest producers' willingness-to-pay (WTP) for soil health-enhancing ecosystem services (ES), another examining the impact of policy implementation locations on WTP, and a third identifying factors influencing producers' adoption of cover crops (CC).

The first essay pioneers the understanding of agricultural producers’ valuation of soil health-associated ES amid growing concerns of soil degradation due to agricultural intensification. Using a discrete choice experiment, this study assesses producers’ WTP for a policy that incentivizes ES provision, specifically improved water quality, carbon sequestration, and enhanced crop yield. Surveying producers across Iowa, Kansas, and Nebraska, our results show …

Population Demography, Occupancy, And Connectivity Of Invasive Bigheaded Carp In The Platte River, Nebraska And Its Tributaries, Blake W. Logan

School of Natural Resources: Dissertations, Theses, and Student Research

Silver Carp Hypophthalmichthys molitrix and Bighead Carp H. nobilis, collectively referred to as bigheaded carp, are invasive species in the United States of America that have expanded their range throughout the Missouri River basin in the last three decades. It may be desirable to develop management plans directed at the monitoring, control, or removal of bigheaded carp within the Missouri River basin. However, a knowledge gap exists regarding bigheaded carp ecology in Missouri River tributaries, which may be important for the development of management plans. As such, this study characterized bigheaded carp population demographics, occupancy, and connectivity in …

Virtual Fencing In Livestock Management: Effects On Beef Cattle Stress And Enhancing Wildlife Conservation, Kaitlyn E. Dozler

School of Natural Resources: Dissertations, Theses, and Student Research

I examined the effects of virtual fencing on beef cattle stress and how implementing the technology can aid wildlife habitat conservation at the University of Nebraska Gudmundsen Sandhills laboratory (GSL) near Whitman, NE. First, I examined how virtual fencing influences acute heart rate changes in beef cattle fitted with the virtual fencing collars. No significant difference in the average heart rate of a cow (P > 0.05) was observed between the 30 min control and virtual fenced periods for both trial dates. Second, I examined the influence of topography on wildlife species richness and presence at GSL using wildlife camera …

Spatial Ecology Of Mountain Lions Throughout Their Distribution In California, Kyle D. Dougherty

School of Natural Resources: Dissertations, Theses, and Student Research

Mountain lions (Puma concolor) have been studied extensively throughout their wide geographic distribution in the Western Hemisphere, but most research has been conducted at relatively small spatial scales. We used GPS telemetry data contributed by researchers in 16 study areas throughout California to advance understanding of mountain lion spatial ecology. First, we investigated multi-scale resource selection of mountain lions relative to spatially varying risk of intentional human-caused mortality associated with livestock depredation management. We show that individuals that proactively avoided mortality risk when selecting home ranges were able to relax their avoidance of risk when making resource selection …

Hybridization Between The Rare Gray-Headed Chickadee And The Abundant Boreal Chickadee In The Midst Of Shifting Climate, Matthew R. Armstrong

School of Natural Resources: Dissertations, Theses, and Student Research

As species respond to changing climate, distributions and abundances may shift and alter species interactions. Hybridization, a relatively widespread phenomenon becoming more common with climate change, can have beneficial and detrimental effects on population growth rates and genetic integrity. Beneficial effects due to the introduction of advantageous alleles and increased genetic diversity may result from hybridization. Species may also accrue fitness costs associated with changing climates if mismatches occur between environmental variables and phenotypes. The gray-headed chickadee, Poecile cinctus lathami, is an extremely rare songbird that has experienced marked declines in recent decades within its restricted distribution in Alaska …

The Ecological Applications Of Δ17O: Validating A Novel Technique For Assessing Animal Metabolism And Water Intake, Zachary Taylor Steele

Biological Sciences Theses & Dissertations

Animals obtain water via different processes such as drinking, consuming food, and through metabolic processes like at the end of the electron transport chain when atmospheric oxygen is combined with hydrogen to form ‘cytochrome oxidase water’. Assessing animal water flux and metabolism has mainly been conducted via stable isotope analysis (SIA) of biological samples using hydrogen (²H) and oxygen isotopes (¹⁶O, ¹⁷O, and ¹⁸O; Δ¹⁷O), typically using enriched isotope tracers. However, natural abundance isotope modeling offers an approach for conducting SIA of biological samples that differs because it relies on the unique, …

Enhancing Sustainable Development Goals Through Future Vapor Pressure Deficit Analysis In The Nile River Basin, Surendra Maharjan, Wenzhao Li, Shahryar Fazli, Hani Sewilam, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Vapor Pressure Deficit (VPD) is crucial in meteorology and agriculture for understanding plant-environment interactions. Its application as an indicator in agricultural practices notably advances Sustainable Development Goals such as Zero Hunger (SDG 2) and Climate Action (SDG 13). This research focuses on the impact of climate change on agricultural productivity and food security in the Nile River Basin (NRB), emphasizing the role of VPD, temperature, and precipitation. Utilizing Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets from NEX-GDDP-CMIP6, the study analyzes key climatic variables that influence agricultural conditions. The study applies the Mann-Kendall test to evaluate VPD trends from 2000 …

New Insights On Hybridization In Potamogeton Floridanus (The Florida Pondweed), Kaitlyn R. Sampson

Graduate Theses and Dissertations (2019 - present)

Freshwater ecosystems are some of the most important and highest threatened habitats in the world, and aquatic plants play an important, but often-overlooked, role in maintaining them. Potamogeton is a diverse and ecologically important aquatic plant genus well known for taxonomic difficulty and rampant hybridization. lbis study aimed to 1) test the hypothesis that Potamogeton jloridanus (Florida pondweed) is a hybrid between P. oakesianus and P. pulcher, and 2) to investigate correlations in ecological conditions for the focal species. This study revealed the discovery of a new population of P. jloridanus in Big Coldwater Creek in Santa Rosa Co., FL, …

Recommendations For The Revision Of Animal Units And Their Application In The Western Australian Rangelands, Ian Mclean, Sally Finch

Natural resources commissioned reports

This report provides recommendations for the practical application of a methodology for calculating and applying Animal Units in the rangelands of Western Australia.

Animal Units have evolved over time, in their definition, derivation and the size of the standard animals used. This has resulted in their being varying and inconsistent approaches within and across jurisdictions which has limited their application.

The Animal Unit methodology applied in this report is used in other rangeland and pastoral regions, it therefore progresses a nationally consistent approach.

The standard animals used in this methodology are:

• Animal Equivalent (AE), a 450 kg Bos taurus steer …

Assessing Rice Phenological Features With Hyperspectral Imaging Insights From Earth Surface Mineral Dust Source Investigation (Emit), Shahryar Fazli, Wenzhao Li, Surendra Maharjan, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

In California's Central Valley, water management and crop health, particularly in rice cultivation, are critical. This paper details the application of Earth surface Mineral dust source InvesTigation (EMIT) hyperspectral imaging, specifically employing Spectral Correlation Mapper (SCM) and Spectral Information Divergence (SID), for precise phenological analysis. By aligning EMIT data with Hyperion satellite references, we address spectral and geographical discrepancies. Our methodology includes seasonal sampling of spectral curves to capture the phenological stages of rice. Results show a strong correlation (R ² = 0.86) between August EMIT and Reference dataset, emphasizing EMIT's utility in enhancing agricultural practices and water efficiency in …

The Influence Of Recycled Water On Microbial Source Tracking Techniques That Aim To Identify Untreated Sewage In Surface Waters, Aldo E. Lobos

USF Tampa Graduate Theses and Dissertations

Fecal pollution in recreational waters can introduce pathogens that cause increased human health risk, where exposure can occur during recreational activities such as swimming, diving, surfing, and fishing. Furthermore, human fecal pollution (i.e., sewage) can introduce nutrients and other harmful chemicals that may negatively affect the environment and aquatic species. Generally, sewage is considered the highest risk to human health compared to animal fecal pollution because it typically contains a high diversity of pathogens (including human specific viruses), antibiotic resistant bacteria and genes associated with antibiotic resistance. However, pathogens are difficult to detect due to their low concentrations in the …

[Discussions] Vol. 20 Iss. 1

Discussions

This issue of Discussions was published for the Spring 2024 cycle.

Climate, Food, And Humans Predict Communities Of Mammals In The United States, Roland Kays, Matthew H. Snider, Andrew M. Wilson

Environmental Studies Faculty Publications

The assembly of species into communities and ecoregions is the result of interacting factors that affect plant and animal distribution and abundance at biogeographic scales. Here, we empirically derive ecoregions for mammals to test whether human disturbance has become more important than climate and habitat resources in structuring communities.

Biodiversity Conservation In Western China With Scientific And Technological Support: Current Status, Challenges, And Suggestions, Fuwen Wei, Hang Sun, Jiaojun Zhu, Baoguo Li, Gexia Qiao, Shilong Chen, Jiang Zhu, Xiaoge Ping

Bulletin of Chinese Academy of Sciences (Chinese Version)

As a megadiverse country, China has made significant progress in biodiversity conservation in recent years. The western region is a critical area for biodiversity conservation in China, boasting rich species resources and a high proportion of endemic species. However, its ecosystems are fragile and vulnerable to the impacts of multiple factors like climate change and human activities. Scientific and technological support has played a vital supporting role in biodiversity conservation, providing comprehensive support from monitoring and assessment to restoration and decision-making through biodiversity surveys, scientific research, and the establishment of monitoring networks. Nevertheless, challenges remain, including gaps in taxa and …

Assessing The Climate Resilience Of Quercus Garryana In The Portland Metro Region, Jess Rose Nettle Shamek

Dissertations and Theses

In the context of rapid global climate change, understanding the resilience of local tree species is essential for fostering effective environmental stewardship and community hopefulness. Oregon white oak (Quercus garryana), an emblematic species in the Pacific Northwest, has faced significant habitat loss and degradation since settler colonization. However, it also exhibits a predicted resilience to climate change, potentially leading to a range shift and expansion. Species resilience refers to the capacity of a species to persist and adapt in the face of rapid global climate change. Beyond vulnerability assessments and niche models, we know little about this species' …

Heavy Metals Implications To Sediment Microbiome And Coral Response To Arsenic Dosing, Dimitrios G. Giarikos, Amy Hirons, Jose V. Lopez, Abigail Renegar, Jason Gershman

SECLER Data

No abstract provided.

Deferred Grazing And Sheep At The Break Of Season In South West Western Australia, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Grazing annual pastures in the first 12 days after germination can lower the productivity of pastures during winter by removing poorly rooted plants, and by reducing plant leaf area to sub-optimal levels. The Department of Primary Industries and Regional Development (DPIRD) recommends deferring grazing of pasture paddocks at the break-of-season until feed on offer is at least 500–800 kilograms of dry matter per hectare (kg DM/ha). At this level, pasture plants are likely to be firmly rooted and have sufficient leaf area to be productively grazed.

Class Notes

DePaul Magazine

DePaul alumni share news about their promotions, career moves, weddings, birth announcements, other accomplishments and more with the DePaul community. John Carruthers (CMN MA '09) makes pizzas to support nonprofits. Nyabweza Itaagi (LAS MA '18) helps grow a community-owned agro-eco district with a nature trail in a former rail corridor and conversions of vacant lots into urban farms.

Herbicides, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Herbicides play a vital role in integrated weed management programs. Knowledge of the mechanisms and activity of herbicides will improve the impact and sustainability of herbicides as a weed management tactic. This fact sheet is a guide to the types of herbicides available and when and how they should be used.

Herbicide Application, Department Of Primary Industries And Regional Development, Western Australia

Grains and other field crops factsheets

Herbicides can be applied by a variety of means, including boom sprayers, aerial spraying, misters, blanket wipers, rope wick applicators, weed seekers and back-pack sprayers. This fact sheet reviews the different methods, including nozzles and calibration of equipment, used to apply herbicides.

A Pilot Study On Particulate Matter Concentrations From Cooking And Its Effects On Indoor Air Pollution In A Mexican American Household In Mission, South Texas, Usa, Sai Deepak Pinakana, Carlos Garcia Patlan, Esmeralda Mendez, Amit U. Raysoni

School of Earth, Environmental, & Marine Sciences Faculty Publications

This pilot study focuses on particulate matter (PM) while cooking in a South Texan household. Dishes such as Beef, Burger, Fish, Chicken, Egg Sandwich, and Hotdog were prepared. Indoor PM levels were compared with outdoor PM levels. A DustTrak DRX was used to monitor the PM released during the cooking process. PM2.5 levels were highest while cooking beef, 162.79 + 209.62 μg m−3. Hot Dog preparation resulted in the lowest PM2.5 concentration of 27.72 + 5.58 μg m−3. Indoor PM2.5 levels were observed to be greater in contrast to outdoor levels when compared to the outdoor levels (96 words).

Grazing Annual Pastures – Using Feed On Offer (Foo) As A Guide, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

Grazing management in winter and spring in South West Western Australia (SW WA) can manipulate the quality, quantity and composition of pasture. These pasture changes can increase livestock feed efficiency and productivity, reduce insect populations and improve pasture persistence. Seasonal grazing based on feed on offer (FOO) is described here to maximise stocking rate and pasture production.

The Department of Primary Industries and Regional Development recommends using feed measurements and feed budgeting to increase productivity and reduce livestock health risks.

Using Bayesian Multispecies Models To Evaluate Fish And Invertebrate Detection Probability And Distribution In The Hypersaline Bahia Grande Tidal Basin, Roy M. Ulibarri, Catherine M. Eckert, David Hicks, David Montagne, Brandon Jones, David R. Stewart

School of Earth, Environmental, & Marine Sciences Faculty Publications

Objective

In 2000, the Laguna Atascosa National Wildlife Refuge acquired the Bahia Grande (Texas) management unit, a space that had lain barren and arid for 70 years. A large cooperative partnership launched a restoration project to replenish the basin and recover its original tidal hydrology. In 2005, the construction of a pilot channel successfully restored water throughout the basin, and plans to eventually widen the channel were developed. Our study aims to evaluate an estuarine habitat restoration by assessing ecological drivers and the impacts on species diversity.

Methods

We evaluated species richness, detection/occupancy rates, and species–habitat relationships, and we estimated …