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Faculty Publications

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Full-Text Articles in Engineering

A Visual Imagination Approach To Cognitive Robotics, Damian M. Lyons, Sirhan Chaudhry, D. Paul Benjamin May 2010

A Visual Imagination Approach To Cognitive Robotics, Damian M. Lyons, Sirhan Chaudhry, D. Paul Benjamin

Faculty Publications

No abstract provided.


Summary Of Feedback Edge Set Papers, Jonathan Johnson Apr 2010

Summary Of Feedback Edge Set Papers, Jonathan Johnson

Faculty Publications

The problem of finding a set of edges F from a directed graph G = (V,E) such that the graph G0 = (V,E − F) contains no cycles is known as the feedback edge set (FES) problem or the feedback arc set problem. A related problem is the minimum feedback edge set problem, in which the feedback edge set F must be minimal. The feedback edge set problem has application in applying a common reliability technique called triple modular redundancy to FPGA circuit designs where configuration memory scrubbing is employed [1].


Integrating Perception And Problem Solving To Predict Complex Object Behaviors, Damian M. Lyons, Sirhan Chaudhry, Marius Agica, John Vincent Monaco Apr 2010

Integrating Perception And Problem Solving To Predict Complex Object Behaviors, Damian M. Lyons, Sirhan Chaudhry, Marius Agica, John Vincent Monaco

Faculty Publications

One of the objectives of Cognitive Robotics is to construct robot systems that can be directed to achieve realworld goals by high-level directions rather than complex, low-level robot programming. Such a system must have the ability to represent, problem-solve and learn about its environment as well as communicate with other agents. In previous work, we have proposed ADAPT, a Cognitive Architecture that views perception as top-down and goaloriented and part of the problem solving process.

Our approach is linked to a SOAR-based problem-solving and learning framework. In this paper, we present an architecture for the perceptive and world modelling components …


Fpga Acceleration Of The Phylogenetic Likelihood Function For Bayesian Mcmc Inference Methods, Stephanie Zierke, Jason D. Bakos Apr 2010

Fpga Acceleration Of The Phylogenetic Likelihood Function For Bayesian Mcmc Inference Methods, Stephanie Zierke, Jason D. Bakos

Faculty Publications

Background
Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. This method is used in applications such as RAxML, GARLI, MrBayes, PAML, and PAUP. The Phylogenetic Likelihood Function (PLF) is an important kernel computation for this method. The PLF consists of a loop with no conditional behavior or dependencies between iterations. As such it contains a high potential for exploiting parallelism using micro-architectural techniques. In this paper, we describe a technique for mapping the PLF and supporting logic onto a Field Programmable Gate Array (FPGA)-based co-processor. By leveraging …


Cyber This, Cyber That...So What?, Eric D. Trias, Bryan Bell Apr 2010

Cyber This, Cyber That...So What?, Eric D. Trias, Bryan Bell

Faculty Publications

This article endorses the idea that cyber operations may be conducted in all war-fighting domains: air, space, cyberspace, land, and sea. In addition, despite the immaturity of cyberspace operational doctrines, the doctrines from air and space remain relevant and applicable to the cyberspace domain. Cyber operations are just another set of tools in the commander's toolbox. Although cyber operations have distinct ways of achieving effects, from an Air Force perspective they are similar too the air and space operations that support air and space (and cyberspace) functions. Known and established cyber operations provide war fighters with viable options to kinetic …


Preliminary Results Of Combining Low Frequency Low Intensity Ultrasound And Liposomal Drug Delivery To Treat Tumors In Rats, William G. Pitt, Ghaleb A. Husseini, Beverly L. Roeder, David Dickinson, David Warden, Jonathan Hartley, Peter Jones Mar 2010

Preliminary Results Of Combining Low Frequency Low Intensity Ultrasound And Liposomal Drug Delivery To Treat Tumors In Rats, William G. Pitt, Ghaleb A. Husseini, Beverly L. Roeder, David Dickinson, David Warden, Jonathan Hartley, Peter Jones

Faculty Publications

Ultrasound is a convenient trigger for site-specific drug delivery in cancer therapy. Nanosized liposomes formulated from soy phosphatidyl choline, cholesterol, 1,2-distearoyl-sn-glycero3-phosphoethanolamine-N-[carboxy(polyethylene glycol)-2000] and alpha-tocopherol were loaded with Doxorubicin (Dox)using a pH gradient. The liposomal suspension was infused through the tail vein of BDIX rats possessing bilateral intradermal DHD/K12 tumors on their hind legs. Then 20-kHz ultrasound was applied to only one of the tumors for 15 minutes. This therapy was repeated weekly for 4 weeks. The results showed that in five of sixrats, the tumors regressed to non-measurable size within 4 weeks. A paired comparison of the normalized size of …


Reverberation-Chamber Test Environment For Outdoor Urban Wireless Propagation Studies, Helge Fielitz, Kate A. Remley, Christopher L. Holloway, Qian Zhang, Qiong Wu, David W. Matolak Mar 2010

Reverberation-Chamber Test Environment For Outdoor Urban Wireless Propagation Studies, Helge Fielitz, Kate A. Remley, Christopher L. Holloway, Qian Zhang, Qiong Wu, David W. Matolak

Faculty Publications

We introduce a test environment to replicate the well-known clustering of reflections in power delay profiles arising from late-time delays and reflections. Urban wireless propagation environments are known to exhibit such clustering. The test setup combines discrete reflections generated by a fading simulator with the continuous distribution of reflections created in a reverberation chamber. We describe measurements made in an urban environment in Denver, CO, that illustrate these multiple distributions of reflections. Our comparison of measurements made in the urban environment to those made in the new test environment shows good agreement.


Bidirectional Electrowetting Actuation With Voltage Polarity Dependence, Nathan B. Crane, Alex A. Volinsky, Pradeep Mishra, Ajay Rajgadkar, Mehdi Khodayari Mar 2010

Bidirectional Electrowetting Actuation With Voltage Polarity Dependence, Nathan B. Crane, Alex A. Volinsky, Pradeep Mishra, Ajay Rajgadkar, Mehdi Khodayari

Faculty Publications

This work presents an electrowetting system in which the actuation direction depends on the polarity of the applied voltage. Since electrowetting response depends on the voltage squared, it is typically independent of voltage sign to first order. However, the introduction of an electrochemicaal diode into the equivalent electrical circuit permits polarity-dependent behavior. Electrochemical diodes were created by making holes in the dielectric. The aluminum electrodes passivate and prevent current flow in one direction, creating diode-like behavior with high breakdown voltage. The resulting actuation forces were directly measured and are of comparable magnitude for both actuation directions.


Note: Thermal Analog To Atomic Force Microscopy Force-Displacement Measurements For Nanoscale Interfacial Contact Resistance, Brian D. Iverson, John E. Blendell, Suresh V. Garimella Mar 2010

Note: Thermal Analog To Atomic Force Microscopy Force-Displacement Measurements For Nanoscale Interfacial Contact Resistance, Brian D. Iverson, John E. Blendell, Suresh V. Garimella

Faculty Publications

Thermal diffusion measurements on polymethylmethacrylate-coated Si substrates using heated atomic force microscopy tips were performed to determine the contact resistance between an organic thin film and Si. The measurement methodology presented demonstrates how the thermal contrast signal obtained during a force-displacement ramp is used to quantify the resistance to heat transfer through an internal interface. The results also delineate the interrogation thickness beyond which thermal diffusion in the organic thin film is not affected appreciably by the underlying substrate.


Multidisciplinary Considerations In The Design Of Wings And Wing Tip Devices, Andrew Ning, Ilan Kroo Mar 2010

Multidisciplinary Considerations In The Design Of Wings And Wing Tip Devices, Andrew Ning, Ilan Kroo

Faculty Publications

Conceptual wing design analysis methods are combined with numerical optimization to find minimum drag wings subject to constraints on lift, weight, pitching moment, and stall speed. Tip extensions and winglets designed for minimum drag achieve similar performance, with the optimal solution depending on the ratio of the maneuver lift coecient to the cruise lift coecient. The results highlight the importance of accounting for the depth of the wing structural box in the weight model, and including constraints on stall speed. For tailless aircraft, C-wings show a slight performance advantage over wings with winglets when longitudinal trim and stability constraints are …


Adhesion At Diamond /Metal Interfaces: A Density Functional Theory Study, Haibo Guo, Yue Qi, Xiaodong Li Feb 2010

Adhesion At Diamond /Metal Interfaces: A Density Functional Theory Study, Haibo Guo, Yue Qi, Xiaodong Li

Faculty Publications

To understand the basic material properties required in selecting a metallic interlayer for enhanced adhesion of diamondcoatings on the substrates, the interfaces between diamond and metals with different carbide formation enthalpies (Cu, Ti, and Al) are studied using density functional theory. It is found that the work of separation decreases, while the interface energy increases, with the carbide formation enthalpy ΔHf (Tiys (Ti>Cu>Al), is needed to achieve a higher overall interface strength. In addition, when the surface energy is larger than the interface energy, a wetted diamond/metal interface is formed during diamondnucleation, providing the strongest adhesion …


Statistical Approach For Yield Optimization For Minimum Energy Operation In Subthreshold Circuits Considering Variability Issues, Md. Waliullah Khan Nomani, Mohab Anis, Goutam Koley Feb 2010

Statistical Approach For Yield Optimization For Minimum Energy Operation In Subthreshold Circuits Considering Variability Issues, Md. Waliullah Khan Nomani, Mohab Anis, Goutam Koley

Faculty Publications

The supply voltage (V-dd) and threshold voltage (V-th) are two significant design variables that directly impact the performance and power consumption of circuits. The scaling of these voltages has become a popular option to satisfy performance and low power requirements. Subthreshold operation is a compelling approach for energy-constrained applications where processor speed is less important. However, subthreshold designs show dramatically increased sensitivity to process variations due to the exponential relationship of subthreshold drive current with V-th variation and drastically growing leakage power. If there is uncertainty in the value of the threshold or supply voltage, the power advantages of this …


Synchronizing Real And Predicted Synthetic Video Imagery For Localization Of A Robot To A 3d Environment, Damian M. Lyons, Sirhan Chaudhry, D. Paul Benjamin Jan 2010

Synchronizing Real And Predicted Synthetic Video Imagery For Localization Of A Robot To A 3d Environment, Damian M. Lyons, Sirhan Chaudhry, D. Paul Benjamin

Faculty Publications

A mobile robot moving in an environment in which there are other moving objects and active agents, some of which may represent threats and some of which may represent collaborators, needs to be able to reason about the potential future behaviors of those objects and agents. In previous work, we presented an approach to tracking targets with complex behavior, leveraging a 3D simulation engine to generate predicted imagery and comparing that against real imagery. We introduced an approach to compare real and simulated imagery using an affine image transformation that maps the real scene to the synthetic scene in a …


Mining Frequent Generalized Patterns For Web Personalization In The Presence Of Taxonomies, P. Giannikopoulos, I. Varlamis, Magdalini Eirinaki Jan 2010

Mining Frequent Generalized Patterns For Web Personalization In The Presence Of Taxonomies, P. Giannikopoulos, I. Varlamis, Magdalini Eirinaki

Faculty Publications

The Web is a continuously evolving environment, since its content is updated on a regular basis. As a result, the traditional usage-based approach to generate recommendations that takes as input the navigation paths recorded on the Web page level, is not as effective. Moreover, most of the content available online is either explicitly or implicitly characterized by a set of categories organized in a taxonomy, allowing the page-level navigation patterns to be generalized to a higher, aggregate level. In this direction, the authors present the Frequent Generalized Pattern (FGP) algorithm. FGP takes as input the transaction data and a hierarchy …


Challenges Students Face When Solving Open - Ended Problems, Nikos J. Mourtos Jan 2010

Challenges Students Face When Solving Open - Ended Problems, Nikos J. Mourtos

Faculty Publications

Several core aerospace engineering courses at SJSU have been re-designed in an effort to help students develop problem-solving skills. This re-design includes (a) explicit definition of skills and attributes students need to develop to become capable problem-solvers, (b) inclusion of open-ended problems in each of several key, junior-level, core courses, (c) coaching students in the use of Wood’s Problem-Solving Methodology, and (d) development of rubrics to evaluate student performance at each step of this methodology. The paper discusses the application of this process and, in particular, it presents an assessment of student performance in two courses: fluid mechanics and aerodynamics. …


On Iterative Decoding Of Two-Level Superposition Codes For Cooperative Broadcasting Based On Qpsk And 4-Pam Constellations, Robert H. Morelos-Zaragoza Jan 2010

On Iterative Decoding Of Two-Level Superposition Codes For Cooperative Broadcasting Based On Qpsk And 4-Pam Constellations, Robert H. Morelos-Zaragoza

Faculty Publications

This paper considers iterative decoding of two-level superposition codes used in cooperative broadcasting over wireless networks. The coding scheme consists of two low-density parity-check (LDPC) codes combined using Plotkin's |u|u + v|-construction and provides two levels of error protection. Coding for cooperative broadcasting differs from conventional single-source broadcast coding. Instead of binary addition of subcode codewords performed by a single-source encoder, in superposition coding two modulated subcode sequences, produced by two coordinated and independent sources, are combined at the antenna of the receiver. Expressions are derived for the bit metrics, or log-likelihood ratio values, used by an iterative decoder for …


Far-Field Optical Nanoscopy Based On Continuous Wave Laser Stimulated Emission Depletion, C. Kuang, Wei Zhao, Guiren Wang Jan 2010

Far-Field Optical Nanoscopy Based On Continuous Wave Laser Stimulated Emission Depletion, C. Kuang, Wei Zhao, Guiren Wang

Faculty Publications

Stimulated emission depletion (STED) microscopy is one of the breakthrough technologies that belong to far-field optical microscopy and can achieve nanoscale spatial resolution. We demonstrate a far-field optical nanoscopy based on continuous wave lasers with different wavelengths, i.e., violet and green lasers for excitation and STED, respectively. Fluorescent dyes Coumarin 102 and Atto 390 are used for validating the depletion efficiency. Fluorescent nanoparticles are selected for characterizing the spatial resolution of the STED system. Linear scanning of the laser beams of the STED system along one line of a microscope slide, which is coated with the nanoparticles, indicates that a …


Structural Health Monitoring With Piezoelectric Wafer Active Sensors—Predictive Modeling And Simulation, Victor Giurgiutiu Jan 2010

Structural Health Monitoring With Piezoelectric Wafer Active Sensors—Predictive Modeling And Simulation, Victor Giurgiutiu

Faculty Publications

This paper starts a review of the state of the art in structural health monitoring with piezoelectric wafer active sensors and follows with highlighting the limitations of the current approaches which are predominantly experimental. Subsequently, the paper examines the needs for developing a predictive modeling methodology that would allow to perform extensive parameter studies to determine the sensing method’s sensitivity to damage and insensitivity to confounding factors such as environmental changes, vibrations, and structural manufacturing variability. The thesis is made that such a predictive methodology should be multi-scale and multi-domain, thus encompassing the modeling of structure, sensors, electronics, and power …


Structural Health Monitoring With Piezoelectric Wafer Active Sensors--Predictive Modeling And Simulation, Victor Giurgiutiu Jan 2010

Structural Health Monitoring With Piezoelectric Wafer Active Sensors--Predictive Modeling And Simulation, Victor Giurgiutiu

Faculty Publications

This paper starts a review of the state of the art in structural health monitoring with piezoelectric wafer active sensors and follows with highlighting the limitations of the current approaches which are predominantly experimental. Subsequently, the paper examines the needs for developing a predictive modeling methodology that would allow to perform extensive parameter studies to determine the sensing method’s sensitivity to damage and insensitivity to confounding factors such as environmental changes, vibrations, and structural manufacturing variability. The thesis is made that such a predictive methodology should be multi-scale and multi-domain, thus encompassing the modeling of structure, sensors, electronics, and power …


Using Jackknife To Assess The Quality Of Gene Order Phylogenies, Jian Shi, Yiwei Zhang, Haiwei Luo, Jijun Tang Jan 2010

Using Jackknife To Assess The Quality Of Gene Order Phylogenies, Jian Shi, Yiwei Zhang, Haiwei Luo, Jijun Tang

Faculty Publications

Background
In recent years, gene order data has attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. If gene orders are viewed as one character with a large number of states, traditional bootstrap procedures cannot be applied. Researchers began to use a jackknife resampling method to assess the quality of gene order phylogenies.

Results
In this paper, we design and conduct a set of experiments to validate the performance of this jackknife procedure and provide discussions on how to conduct it properly. Our results show that jackknife is very useful to …


High-Performance Heterogeneous Computing With The Convey Hc-1, Jason D. Bakos Jan 2010

High-Performance Heterogeneous Computing With The Convey Hc-1, Jason D. Bakos

Faculty Publications

Unlike other socket-based reconfigurable coprocessors, the Convey HC-1 contains nearly 40 field-programmable gate arrays, scatter-gather memory modules, a high-capacity crossbar switch, and a fully coherent memory system.


Comparison Of Stabilization Methods For Fixed-Speed Wind Generator Systems, Mohammod Ali, Bin Wu Jan 2010

Comparison Of Stabilization Methods For Fixed-Speed Wind Generator Systems, Mohammod Ali, Bin Wu

Faculty Publications

Static Synchronous Compensator (STATCOM), Pitch control system, Braking Resistor (BR), and Superconducting Magnetic Energy Storage (SMES) have recently been reported as stabilization methods for fixed-speed wind generator systems. although the individual technologies are well documented, a comparative study of these systems has not been reported so far. This paper aims to fill in the gap, and provides a comprehensive analysis of these stabilization methods for fixed-speed wind generator systems. The analysis is performed in terms of transient stability enhancement, controller complexity, and cost. a novel feature of this work is that the transient stability analysis of wind generator system is …


Integrated Circuit Implementation For A Gan Hfet Driver Circuit, Bo Wang, Jason D. Bakos, Antonello Monti Jan 2010

Integrated Circuit Implementation For A Gan Hfet Driver Circuit, Bo Wang, Jason D. Bakos, Antonello Monti

Faculty Publications

This paper presents the design and implementation of a new integrated circuit (IC) that is suitable for driving the new generation of high-frequency GaN HFETs. The circuit, based upon a resonant switching transition technique, is first briefly described and then discussed in detail, focusing on the design process practical considerations. A new level-shifter topology, used to generate the zero and negative gate-source voltages required to switch the GaN HFET, is introduced and analyzed. The experimental measurements included in this paper report the results of tests carried out on an IC designed and fabricated as part of the multiproject die in …


Quantifying Individual Potential Contributions Of The Hybrid Sulfur Electrolyzer, John A. Staser, Maximilian B. Gorensek, John W. Weidner Jan 2010

Quantifying Individual Potential Contributions Of The Hybrid Sulfur Electrolyzer, John A. Staser, Maximilian B. Gorensek, John W. Weidner

Faculty Publications

The hybrid sulfur cycle has been investigated as a means to produce clean hydrogen efficiently on a large scale by first decomposing H2SO4 to SO2, O2, and H2O and then electrochemically oxidizing SO2 back to H2SO4 with the cogeneration of H2. Thus far, it has been determined that the total cell potential for the hybrid sulfur electrolyzer is controlled mainly by water transport in the cell. Water is required at the anode to participate in the oxidation of SO2 to H2SO4 …


A Novel Far-Field Nanoscopic Velocimetry For Nanofluidics, C. Kuang, Guiren Wang Jan 2010

A Novel Far-Field Nanoscopic Velocimetry For Nanofluidics, C. Kuang, Guiren Wang

Faculty Publications

For the first time we have been able to measure the flow velocity profile for nanofluidics with a spatial resolution better than 70 nm. Due to the diffraction resolution barrier, traditional optical methods have so far failed in measuring the velocity profile in a nanocapillary or a closed nanochannel without an opened sidewall. A novel optical point measurement method is presented which applies stimulated emission depletion (STED) microscopy to laser induced fluorescence photobleaching anemometer (LIFPA) techniques to measure flow velocity. Herein we demonstrate this far-field nanoscopic velocimetry method by measuring the velocity profile in a nanocapillary with an inner diameter …


An Efficient Electrochemical–Thermal Model For A Lithium-Ion Cell By Using The Proper Orthogonal Decomposition Method, Long Cai, Ralph E. White Jan 2010

An Efficient Electrochemical–Thermal Model For A Lithium-Ion Cell By Using The Proper Orthogonal Decomposition Method, Long Cai, Ralph E. White

Faculty Publications

The proper orthogonal decomposition method was applied to develop an efficient, reduced order electrochemical–thermal model for a lithium-ion cell. This model was validated for discharge simulations over a wide range of C rates and various cooling conditions of the cell. The reduced order model agrees well with the COMSOL model, a commercial finite element method solver, and requires times less computation time than the COMSOL model. The model predictions indicate that the discharge time or percent of capacity removed from the cell at an end of discharge voltage of 3.0 V depends on the rate of the discharge and heat …


Maximizing The Life Of A Lithium-Ion Cell By Optimization Of Charging Rates, Saeed Khaleghi Rahimian, Sean Rayman, Ralph E. White Jan 2010

Maximizing The Life Of A Lithium-Ion Cell By Optimization Of Charging Rates, Saeed Khaleghi Rahimian, Sean Rayman, Ralph E. White

Faculty Publications

Using a dynamic optimization method, the optimum charge currents as a function of cycle number during cycling for the lithium-ion cell are obtained. A single particle physics-based model, which includes capacity fade, was applied to simulate the cell performance under low earth-orbit (LEO) cycling conditions. Useful cell life is defined as the number of cycles before the end of discharge voltage drops below 3.0 V or the cell discharge capacity becomes less than 20% of the original discharge capacity. The simulated useful cell life can be increased by ∼29.28% by varying the charge current.


Theoretical Analysis Of Stresses In A Lithium Ion Cell, Sindhuja Renganathan, Godfrey Sikha, Shriram Santhanagopalan, Ralph E. White Jan 2010

Theoretical Analysis Of Stresses In A Lithium Ion Cell, Sindhuja Renganathan, Godfrey Sikha, Shriram Santhanagopalan, Ralph E. White

Faculty Publications

A mathematical model to simulate the generation of mechanical stress during the discharge process in a dual porous insertion electrode cell sandwich comprised of lithium cobalt oxide and carbon is presented. The model attributes stress buildup within intercalation electrodes to two different aspects: changes in the lattice volume due to intercalation and phase transformation during the charge/discharge process. The model is used to predict the influence of cell design parameters such as thickness, porosity, and particle size of the electrodes on the magnitude of stress generation. The model developed in this study can be used to understand the mechanical degradation …


Multimetallic Electrocatalysts Of Pt, Ru, And Ir Supported On Anatase And Rutile Tio2 For Oxygen Evolution In An Acid Environment, Roderick E. Fuentes, Jake Farell, John W. Weidner Jan 2010

Multimetallic Electrocatalysts Of Pt, Ru, And Ir Supported On Anatase And Rutile Tio2 For Oxygen Evolution In An Acid Environment, Roderick E. Fuentes, Jake Farell, John W. Weidner

Faculty Publications

Anatase and rutile TiO2 were investigated as stable supports for different multimetallic nanoparticles (i.e., Pt:Ru, Pt:Ir, Pt:Ru:Ir, and Ir:Ru) and tested for activity toward the oxygen evolution reaction (OER). Overall, Ir:Ru had the highest activity toward OER (i.e., current per gram of metal) compared to the other multimetallic combinations studied. This bimetallic supported on anatase TiO2 had a 53% higher current per gram of metal than an unsupported electrocatalyst of the same composition. The higher catalyst utilization of the supported electrocatalysts for OER is consistent with small, well-dispersed nanoparticles, which were observed in high resolution transmission electron microscopy images.


Mesoporous Tin Oxide As An Oxidation-Resistant Catalyst Support For Proton Exchange Membrane Fuel Cells, Peng Zhang, Sheng-Yang Huang, Branko N. Popov Jan 2010

Mesoporous Tin Oxide As An Oxidation-Resistant Catalyst Support For Proton Exchange Membrane Fuel Cells, Peng Zhang, Sheng-Yang Huang, Branko N. Popov

Faculty Publications

Mesoporous catalyst support based on tin oxide (SnO2) is synthesized with high surface area of 205 m2 g−1 and with narrow pore size distribution. Modified polyol method is used to deposit platinum on SnO2. The physical properties of the support and the SnO2-supported Pt catalyst (Pt/SnO2) are characterized by using the Brunauer, Emmett, and Teller method, X-ray diffraction, and transmission electron microscopy. The electrochemical stability and durability of the Pt/SnO2 catalyst are investigated by the accelerated stress tests proposed by the U.S. Department of Energy. Pt/SnO2 catalyst exhibits …