Engineering Commons^™

Isolation And Production Of Tandem Collagen Binding Domain From Clostridial Collagenase Colg And Developments In C1q Reagent Production For Future Molecule Characterization Work, Stephanie Beitle

Chemical Engineering Undergraduate Honors Theses

This thesis covers a two part project: the production methods to create a double collagen binding domain molecule with a growth factor for wound healing applications and the development of a new in-house production method for isolating C1q from bovine blood. The wound healing molecule was created using transformation, sonication, and purification before being tested via electrophoresis SDS page and Western blots to confirm the molecule’s presence. The C1q in-house production method utilizes an ultrafiltration flow cell rather than dialysis at a critical point in the process, allowing for researchers to not only be able to use a single small …

Comparing Actively Managed Mutual Fund Categories To Index Funds Using Linear Regression Forecasting And Portfolio Optimization, Luke Weiner

Industrial Engineering Undergraduate Honors Theses

The global investment industry offers a wide variety of investment products especially for individual investors. One such product, index funds, which are younger than actively managed mutual funds, have typically outperformed managed funds. Despite this phenomenon, investors have displayed a tendency to continue investing in actively managed funds. Although only a small percentage of actively managed funds outperform index funds, the costs of actively managed funds are significantly higher. Also, managed fund performances are most often determined by their fund category such as growth or real estate. I wanted to answer the following question for individual investors: can we …

Structural Checking Tool Restructure And Matching Improvements, Derek Taylor

Graduate Theses and Dissertations

With the rising complexity and size of hardware designs, saving development time and cost by employing third-party intellectual property (IP) into various first-party designs has become a necessity. However, using third-party IPs introduces the risk of adding malicious behavior to the design, including hardware Trojans. Different from software Trojan detection, the detection of hardware Trojans in an efficient and cost-effective manner is an ongoing area of study and has significant complexities depending on the development stage where Trojan detection is leveraged. Therefore, this thesis research proposes improvements to various components of the soft IP analysis methodology utilized by the Structural …

Modifications Of A Machine To Produce Clinically-Sized Angioplasty Balloons For Bifurcations, Natalie Smith

Biomedical Engineering Undergraduate Honors Theses

Coronary artery disease is the most common form of heart disease and the leading cause of death in the U.S. ("Heart Disease Facts | cdc.gov", 2021). Typically, coronary artery disease is a result of coronary stenosis, constriction of the coronary artery, which can cause heart failure, arrhythmia, or heart attack ("Coronary Artery Disease: Prevention, Treatment and Research", 2021). Angioplasty balloons are a common treatment method for coronary stenosis and work by placing a stent at the lesion site to widen the vessel and promote blood flow. A type of lesion which remains particularly difficult and relatively common to treat is …

Free Convection Heat Transfer From Plates, Alexa Moreno

Chemical Engineering Undergraduate Honors Theses

The purpose of this honors thesis is to create an experiment for the CHEG Lab I course. This report explains the motivation for creating this heat convection experiment, the results of performing the experiment, and provides recommendations for future work on this experiment. Multiple experiments were performed to assess materials and parameters to be investigated. It was determined that a 0.5” plate has smaller percent error and accommodates for the desired timeframe for a Lab I experiment compared to the first plate used (1.5” thickness). Recommendations for expanding on this project include adding experiments using vertical geometry for heat convection …

3d Volumetric Mapping Of Tissue Properties Via A Catheter-Scale Microendoscope Imaging System, Andrew Stark

Biomedical Engineering Undergraduate Honors Theses

The study of tumor microvasculature is an important area of interest for research and clinical communities; however, there are significant limitations in the clinical characterization of the tumor microenvironment. Optical methods offer quantitative real-time measurement of tissue structure and perfusion and can be miniaturized for deployment endoscopically into previously inaccessible locations. However, conventional optical methods (i.e., optical coherence tomography, white light endoscopy, etc.) gives limited information about tissue perfusion while the diameter of various optical probes along with the complexity of scanning mechanisms make it difficult to access certain areas. In this study, a new technique for characterizing the tumor …

Investigating The Impact Of Hypoxia On Reactive Oxygen Species Generation Within Murine Breast Cancer Cells, Jared Mcpeake

Biomedical Engineering Undergraduate Honors Theses

When cancer metastasizes from a primary tumor site to secondary site through the bloodstream or lymph, the cancer becomes more difficult to treat. For this reason, it is vital to study what indicates the metastatic potential of a tumor. Current research has shown that cell lines with high metastatic potential display increased levels of metabolic adaptability over their nonmetastatic counterparts after undergoing hypoxic conditions. One method of assessing this adaptability is to measure the concentration of reactive oxygen species (ROS) produced by the cells while undergoing oxidative stress. In highly adaptable metastatic cells, an increase of ROS buildup within the …

Disparities In Response, Motivations, And Self-Efficacy To Entrepreneurially Minded Learning Within Underrepresented Students' Groups, Kaitlin Hall

Biomedical Engineering Undergraduate Honors Theses

Systemic racism in the United States is embedded within the policies that have created oppression for certain groups. Women, people of color, and those from low-income families have less access to entrepreneurial knowledge due to the education gap. It has been determined that less than 20 percent of US patents entail a female inventor. Black and Hispanic college graduates also lack this access as fewer than half as many individuals hold patents. Ensuring that these populations are educated in inventor knowledge can facilitate greater inclusion. The historical Brown vs the Board of Education intended to end unequal public schooling. It …

Erythrocyte Deformability In Response To Glucose Using Liquid Crystals, Jayden Goff

Biomedical Engineering Undergraduate Honors Theses

The worldwide prevalence of diabetes mellitus is rapidly increasing with about 9.3% of the adult population living with the disease. People with diabetes have trouble regulating their blood glucose levels which typically leads to hyperglycemia. Under normal physiological conditions, erythrocytes can undergo deformations in response to shear stress when passing through capillaries with a smaller diameter. Poorly managed hyperglycemia can lead to the glycosylation of erythrocyte membrane proteins and hemoglobin. This glycosylation leads to increased rigidity of the cells along with decreased deformability in response to mechanical stress; therefore, these cells have a higher susceptibility of getting stuck in the …

Clot Analogs For The Development Of Improved Treatment Methods In Ischemic Stroke, Charles A. Rieth

Biomedical Engineering Undergraduate Honors Theses

According to the CDC, nearly 800,000 individuals experience stroke each year in the United States [1]. Greater than 70% of strokes are of ischemic etiology and involve the occlusion of key arteries in the cardiovascular system [2]. Tissue plasminogen activator (IV-tPA) is the current gold standard for thrombolytic approaches [3]; however, this therapeutic is only effective between 3 and 4.5 hours from the patient’s last know well [4]. As a result, less than 5% of acute ischemic stroke patients receive IV-tPA. In order to increase the viability of AIS treatment as a whole, it is essential that thrombolytic techniques are …

The Influence Of Mmp14 On Angiogenesis In Chemotherapy-Treated Tumors, Abdussaboor Muhammad

Biomedical Engineering Undergraduate Honors Theses

Colorectal cancer is the third most common cancer in the world, and it is the fourth most common cause of cancer related death (1). There have been many significant advancements regarding the treatment of cancer which aim to shrink the size of tumors in patients. However, there is still more that needs to be understood about the many different factors that play a role in colorectal cancer development.

Angiogenesis is the process of forming new blood vessels from existing ones and it requires breaking down and remodeling of the extracellular matrix (ECM) in order to allow endothelial cells to migrate …

Atomic Force Microscopy Based Dna Sensing And Manipulation, Matthew Shubert

Mechanical Engineering Undergraduate Honors Theses

Sequencing DNA provides a positive impact for the biomedical community by understanding a wide variety of applications such as human genetics, disease, and pathogens. The reason the Arkansas Micro & Nano Systems lab is involved with research in DNA sequencing is due to the current, leading industry method. Nanopore sequencing was developed by Oxford Nanopore Technology in which its sequencing method separates double stranded DNA to electrically characterize individual nucleotides traveling through a charged nanopore. Unfortunately, nanopore sequencing uses biological materials that require a shelf life and drives high cost. Therefore, the Arkansas Micro & Nano Systems lab has developed …

Pulse Rate Variability Analysis During Hemorrhage In An Experimental Porcine Model, Gabbie Bonvillain, Lauren Crimmins, Md Abul Hayat, Adria Abella Villafranca, Sam Stephens, Hanna K. Jensen, Joseph A. Sanford, Jingxian Wu, Kevin W. Sexton, Morten Jensen

Biomedical Engineering Undergraduate Honors Theses

During the acute phase of hemorrhage, heart rate and peripheral resistance increases to maintain proper oxygen delivery to vital organs. This response is mediated by the autonomic nervous system. Heart rate variability (HRV) has become a widely utilized measure to determine the autonomic nervous system control over the heart. Recently, pulse rate variability (PRV) has been suggested to serve as a surrogate for HRV. This study evaluates the ability of PRV obtained from peripheral arterial pressure waveforms as a method for detecting hemorrhage. Time domain and frequency domain metrics were evaluated for 5-minute and 15-minute arterial pressure waveform signals prior …

Localized Intra-Arterial Drug Delivery Device For Stroke Treatment, Benjamin Yip

Biomedical Engineering Undergraduate Honors Theses

Strokes are one of the leading causes of death and long-term disability in the United States, and according to the Centers for Disease Control and Prevention more than 795,000 people experience a stroke every year. Around 87% of all strokes are ischemic strokes making it the most common form of stroke. While ischemic strokes are treatable, current devices and methods still result in high mortality rates and high risks of hemorrhaging after treatment. The aim of this study is to design and test a prototype of a novel device for the localized delivery of thrombolytics to treat ischemic strokes. The …

Diffusion Of A Salt In An Aqueous Media, Aldaly Pineda Hernandez

Chemical Engineering Undergraduate Honors Theses

Diffusion is defined as the net transfer of a molecule from a high concentration region to a low concentration region. The concept of diffusion is used in a very important process called "desalination." Desalination is a separation process used to reduce the salt content dissolved in brackish water to make it suitable for human consumption, irrigation, and industrial use.

In desalination plants, it is important to monitor the constantly changing salt content of water, partly due to the diffusive effect. The main purpose of this experiment was to study the diffusion of NaCl in water at two NaCl concentrations. The …

Synthesis And Phase Transition Characterization Of Liquid Crystal Membranes With Slit-Like Pores, Isaac Hopwood

Chemical Engineering Undergraduate Honors Theses

Membranes with slit-like pores have been of interest for some time due to their ability to reject smaller particles than traditional cylindrical-pored membranes at the same fluid flux. However, using liquid crystals as a template for this sort of membrane has not been thoroughly investigated. In this study, the liquid crystal mixture of RM257 (2-Methyl-1,4-phenylene bis(4-(3-(acryloyloxy)propoxy)benzoate)) and 5CB (4-Cyano-4'-pentylbiphenyl) for the purpose of manufacturing membranes with slit-like pores, the phase transition behavior of this LC mixture at various mole fractions of RM257, and the impact of mole fraction of RM257 in the liquid crystal (LC) mixture and membrane manufacturing conditions …

Quantification Of Slit-Like Pores Through Using Liquid Crystals As A Template, Dominique Savage

Chemical Engineering Undergraduate Honors Theses

The purpose of this research is to manufacture a membrane with slit-like pores to achieve particle filtration. Slit-like pore membranes are preferred over conventional membranes with cylindrical pores since slit-like pores have two length scales that can be manipulated to better control cut off and flux through the membrane. This project focuses on manufacturing slit-like pore membranes through the use of two liquid crystals, 1,4-bis[4-(6-acryloyloxyhexyloxy)benzoyloxy]-2-methylbenzene (RM257) and 4-Cyano-4′-pentylbiphenyl (5CB). This method for making slit-like pores has not been widely investigated nor has the morphology of the membrane pores and mechanical properties of such a membrane been addressed. It was found …

Analyzing The Surface Chemistry Of Ni-Fe Hydroxide Alloy Nanoparticles As Catalysts For The Oxygen Evolution Reaction By X-Ray Photoelectron Spectroscopy Analysis, Lauren B. Shepard

Chemical Engineering Undergraduate Honors Theses

Water electrolysis has been proposed as a renewable source of hydrogen, a possible replacement to harmful fossil fuels. This process can be broken down into two half reactions, the hydrogen evolution reaction and the oxygen evolution reaction. Because the oxygen evolution reaction has slow kinetics and a high overpotential to overcome, a catalyst is needed to speed up the kinetics and ensure faster and more efficient production of molecular hydrogen. The use of Ni-Fe hydroxide alloy nanoparticles as a catalyst has been shown to significantly improve the efficiency of the reaction by decreasing the overpotential, making the process more energy …

Optimized Damage Assessment And Recovery Through Data Categorization In Critical Infrastructure System., Shruthi Ramakrishnan

Graduate Theses and Dissertations

Critical infrastructures (CI) play a vital role in majority of the fields and sectors worldwide. It contributes a lot towards the economy of nations and towards the wellbeing of the society. They are highly coupled, interconnected and their interdependencies make them more complex systems. Thus, when a damage occurs in a CI system, its complex interdependencies make it get subjected to cascading effects which propagates faster from one infrastructure to another resulting in wide service degradations which in turn causes economic and societal effects. The propagation of cascading effects of disruptive events could be handled efficiently if the assessment and …

Design, Fabrication, And Characterization Of An Array Of Graphene Based Variable Capacitors, Millicent Nkirote Gikunda

Graduate Theses and Dissertations

Since it was first isolated and characterized in 2004, graphene has shown the potential for a technological revolution. This is due to its amazing physical properties such as high electrical conductivity, high thermal conductivity, and extreme flexibility. Freestanding graphene membranes naturally possesses an intrinsic rippled structure, and these ripples are in constant random motion even room temperatures. Occasionally, the ripples undergo spontaneous buckling (change of curvature from concave to convex and vice versa) and the potential energy associated with this is a double well potential. This movement of graphene is a potential source of vibrational energy.

In this dissertation, we …

High Power Density And High Efficiency Converter Topologies For Renewable Energy Conversion And Ev Applications, Dereje Lemma Woldegiorgis

Graduate Theses and Dissertations

This dissertation work presents two novel converter topologies (a three-level ANPC inverter utilizing hybrid Si/SiC switches and an Asymmetric Alternate Arm Converter (AAAC) topology) that are suitable for high efficiency and high-power density energy conversion systems. The operation principle, modulation, and control strategy of these newly introduced converter topologies are presented in detail supported by simulation and experimental results. A thorough design optimization of these converter topologies (Si/SiC current rating ratio optimization and gate control strategies for the three-level ANPC inverter topology and component sizing for the asymmetric alternate arm converter topology) are also presented.

Performance comparison of the proposed …

A Novel Data Lineage Model For Critical Infrastructure And A Solution To A Special Case Of The Temporal Graph Reachability Problem, Ian Moncur

Graduate Theses and Dissertations

Rapid and accurate damage assessment is crucial to minimize downtime in critical infrastructure. Dependency on modern technology requires fast and consistent techniques to prevent damage from spreading while also minimizing the impact of damage on system users. One technique to assist in assessment is data lineage, which involves tracing a history of dependencies for data items. The goal of this thesis is to present one novel model and an algorithm that uses data lineage with the goal of being fast and accurate. In function this model operates as a directed graph, with the vertices being data items and edges representing …

Modeling Damage Spread, Assessment, And Recovery Of Critical Systems, Justin Burns

Graduate Theses and Dissertations

Critical infrastructure systems have recently become more vulnerable to attacks on their data systems through internet connectivity. If an attacker is successful in breaching a system’s defenses, it is imperative that operations are restored to the system as quickly as possible. This thesis focuses on damage assessment and recovery following an attack. A literature review is first conducted on work done in both database protection and critical infrastructure protection, then the thesis defines how damage affects the relationships between data and software. Then, the thesis proposes a model using a graph construction to show the cascading affects within a system …

Ultrafiltration Membranes Functionalized With Copper Oxide And Zwitterions For Fouling Resistance, Cannon Hackett, Mojtaba Abolhassani, Lauren Greenlee, Audie K. Thompson

Chemical Engineering Faculty Publications and Presentations

Polymeric membrane fouling is a long-standing challenge for water filtration. Metal/metal oxide nanoparticle functionalization of the membrane surface can impart anti-fouling properties through the reactivity of the metal species and the generation of radical species. Copper oxide nanoparticles (CuO NPs) are effective at reducing organic fouling when used in conjunction with hydrogen peroxide, but leaching of copper ions from the membrane has been observed, which can hinder the longevity of the CuO NP activity at the membrane surface. Zwitterions can reduce organic fouling and stabilize NP attachment, suggesting a potential opportunity to combine the two functionalizations. Here, we coated polyethersulfone …

The Effects Of Metronomic And Maximum-Tolerated Dose Chemotherapy In Colorectal Cancer Angiogenesis: A Combined Approach Using Endoscopic Diffuse Reflectance Spectroscopy And Mrna Expression, Ariel Isaac Mundo Ortiz

Graduate Theses and Dissertations

Colorectal cancer (CRC) continues to be one of the most incident and deadliest types of cancer worldwide. Chemotherapy has proven effective to reduce tumor burden for CRC patients, but there are several disadvantages associated with the use of mainstay maximtolerated dose (MTD) chemotherapeutic strategies. Metronomic chemotherapy (MET) has been developed as an alternative that addresses the shortcomings of maximum-tolerated dose chemotherapy but so far its effectiveness as a neoadjuvant strategy for CRC has not been explored.

This dissertation uses a combined optics and molecular biology approach (using diffuse reflectance spectroscopy and mRNA expression) to study the changes in angiogenesis and …

Diffusive Dynamics Of Biological Macromolecules In The Cytoplasm Of Live Bacteria, Asmaa Sadoon

Graduate Theses and Dissertations

Bacteria are small organisms that play important roles in our bodies and in maintaining our surrounding environment. However, bacterial infections are considered as one of the health diseases that threatens the lives of humans. Resistance of bacteria to antibiotics has made treating bacterial infections more challenging. With the emergence of many developed optical techniques, it has become possible to study various biological mechanisms of molecules inside these small organisms with high resolution and precise localization. In this research, single particle tracking photoactivation localization microscopy (sptPALM) technique was used to investigate the dynamics of fluorescent histonelike nucleoid-structuring proteins (H-NS) in live …

Cyanobacterial And Microcystin Response To Nutrient Additions At Lake Fayetteville Throughout The 2021 Growing Season, Lillie Haddock

Graduate Theses and Dissertations

Harmful Algal Blooms (HABs) are becoming a global concern due to their increasing distribution, frequency, intensity, and the occurrence of toxins. While it is known that eutrophication influences algal blooms, there is less known about what triggers these HABs to produce toxins, especially microcystin. In this study, we conducted 21 community bioassays at Lake Fayetteville, a hypereutrophic reservoir in Fayetteville, Arkansas, from April-November 2021 to examine how the addition of phosphorous and nitrogen influence cyanobacteria concentrations, microcystin concentrations, and microcystin toxin production. These experiments included a control, nitrogen (1.0 mg/L as KNO3), low phosphorus (0.025 mg/L as K2HPO4), high phosphorus …

Development Of A Long-Read Sequencing Protocol To Assess The Precision And Efficacy Of Gene Editing For Duchenne Muscular Dystrophy, Landon Andrew Burcham

Graduate Theses and Dissertations

This work establishes a method for assessing on-target precision due to CRISPR-Cas9 gene editing, especially within the context of exon skipping therapy for Duchenne Muscular Dystrophy. The proposed method utilizes an Oxford nanopore long-read sequencing approach to sequence amplified regions of DNA that have been edited using CRISPR-Cas9. NIH3T3 and C2C12 cell lines were treated with a dual-guide CRISPR-Cas9 system, that targets and deletes exon 23 from the DMD gene in mouse samples. Deletion PCR revealed deletion of exon 23 in both DNA and cDNA samples. Additionally, sequencing using Oxford Nanopore revealed targeted exon 23 deletion as the most prevalent …

Generative Designs Of Lightweight Air-Cooled Heat Exchangers, Connor Miller

Mechanical Engineering Undergraduate Honors Theses

The development of high-performance air-cooled heat exchangers is required to permit the rapid growth of vehicle and aircraft electrification. In electric vehicles and airliners, the motors and power electronics are integrated into a compact space, leading to unprecedently high power density. To achieve higher overall thermal efficiency, the heat exchangers must be extremely light while maintaining their heat transfer performance and mechanical robustness. Recently advances in 3D metal printing, e.g., direct metal laser sintering, and selective laser melting, have enabled the manufacturing of high-performance robust heat exchangers by eliminating thermal boundary resistance and ensuring a uniform thermal expansion coefficient. Nonetheless, …

Orbital Debris Analysis And Orbital Decay Analysis Of Arksat-2, Will Stuff

Mechanical Engineering Undergraduate Honors Theses

ARKSAT-2 is a cube satellite developed by the University of Arkansas for its second CubeSat mission. There are two objectives of the ARKSAT-2 mission. The first objective of this mission is to test a novel cold gas thruster propulsion system using water-propylene propellant. This propulsion system will be used for attitude control of the satellite. The second objective for the ARKSAT-2 mission is to test a Solid-State Inflation Balloon (SSIB) that has been designed and developed for this mission. The SSIB is designed to be a simple and cost-effective method for deorbiting the vehicle. In cube satellites, a software known …