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Articles 5311 - 5340 of 14173
Full-Text Articles in Engineering
Large-Scale Non-Linear Dynamic Optimization For Combining Applications Of Optimal Scheduling And Control, Logan Daniel Beal
Large-Scale Non-Linear Dynamic Optimization For Combining Applications Of Optimal Scheduling And Control, Logan Daniel Beal
Theses and Dissertations
Optimization has enabled automated applications in chemical manufacturing such as advanced control and scheduling. These applications have demonstrated enormous benefit over the last few decades and continue to be researched and refined. However, these applications have been developed separately with uncoordinated objectives. This dissertation investigates the unification of scheduling and control optimization schemes. The current practice is compared to early-concept, light integrations, and deeper integrations. This quantitative comparison of economic impacts encourages further investigation and tighter integration. A novel approach combines scheduling and control into a single application that can be used online. This approach implements the discrete-time paradigm from …
Optimization-Based Spatial Positioning And Energy Management For Unmanned Aerial Vehicles, Ronald Abraham Martin
Optimization-Based Spatial Positioning And Energy Management For Unmanned Aerial Vehicles, Ronald Abraham Martin
Theses and Dissertations
This research applies techniques from the field of optimization to spatial positioning and energy management in Unmanned Aerial Vehicles (UAVs). Two specific areas are treated: optimization of UAV view plans for 3D modeling of infrastructure, and trajectory optimization of solar powered high-altitude long-endurance (HALE) UAVs. Structure-from-Motion (SfM) is a computer vision technique for creating 3D models from 2D images. View planning is the process of planning image sets that will effectively model a given scene. First, a genetic algorithm based view planning approach is demonstrated. A novel terrain simulation environment is developed, and the algorithm is tested at multiple sites …
Experimentation And Modeling Of The Effects Of Along-Wind Dispersion On Cloud Characteristics Of Finite-Duration Contaminant Releases In The Atmosphere, Jessica M. Morris
Experimentation And Modeling Of The Effects Of Along-Wind Dispersion On Cloud Characteristics Of Finite-Duration Contaminant Releases In The Atmosphere, Jessica M. Morris
Graduate Theses and Dissertations
Along-wind dispersion, or stretching of the cloud in the direction of the wind, plays an important role in the concentration and modeling of contaminant releases in the atmosphere. Theoretical and empirical derivations were compared for appropriate parameterization of along-wind dispersion. Available field data were analyzed to evaluate and improve previous parameterizations of the along-wind dispersion coefficient, σ_x. An experimental test program was developed and executed in an ultra-low speed wind tunnel at the Chemical Hazards Research Center to determine the effects of the time distribution coefficient on true finite-duration releases from an original area source. Multiple wind speeds, release durations, …
Lipid Extraction From Spirulina Sp. And Schizochytrium Sp. Using Supercritical Co2 With Methanol, Shihong Liu, Husam A. Abu Hajar, Guy Riefler, Ben J. Stuart
Lipid Extraction From Spirulina Sp. And Schizochytrium Sp. Using Supercritical Co2 With Methanol, Shihong Liu, Husam A. Abu Hajar, Guy Riefler, Ben J. Stuart
Civil & Environmental Engineering Faculty Publications
Microalgae are one of the most promising feedstocks for biodiesel production due to their high lipid content and easy farming. However, the extraction of lipids from microalgae is energy intensive and costly and involves the use of toxic organic solvents. Compared with organic solvent extraction, supercritical CO2 (SCCO2) has demonstrated advantages through lower toxicity and no solvent-liquid separation. Due to the nonpolar nature of SCCO2, polar organic solvents such as methanol may need to be added as a modifier in order to increase the extraction ability of SCCO2. In this paper, pilot scale lipid …
Experimental Study On The Influence Of Slickwater On Shale Permeability, Zhonghua Liu, Baojun Bai, Zheyu Zhang, Jing Tang, Shunpeng Zeng, Xiaogang Li
Experimental Study On The Influence Of Slickwater On Shale Permeability, Zhonghua Liu, Baojun Bai, Zheyu Zhang, Jing Tang, Shunpeng Zeng, Xiaogang Li
Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works
There are two diametrically opposite views of the influence of slickwater on shale permeability among scholars at home and abroad. We used the shale outcrops rock samples from the Lower Silurian Longmaxi Formation in Sichuan Basin. The permeability of these dry samples before and after immersion in different solution systems were tested by pulse attenuation method. The experimental results show that the impregnation of different slickwater components and standard salt solution can promote the increase of the permeability of shale samples. The stress sensitivity of shale samples after liquid immersion is medium weak to weak. The sample stress sensitivity is …
Preformed-Particle-Gel Placement And Plugging Performance In Fractures With Tips, Ze Wang, Baojun Bai
Preformed-Particle-Gel Placement And Plugging Performance In Fractures With Tips, Ze Wang, Baojun Bai
Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works
Preformed-particle gels (PPGs) have been applied for reducing excessive water production caused by fractures in reservoirs. A portion of the fractures existing in reservoirs is composed of a void part and a fracture tip. The PPG placement behavior and plugging performance could be mainly affected by the fracture tips. A fracture with a tip, called a "partially open fracture" in this paper, was designed to investigate the placement and water-plugging performance of PPG. Cylindrical sandstone cores were used to manufacture partially open fractures. Pressure data of PPG injection, post-gel water breakthrough, and stable injection were analyzed to investigate the PPG …
Determining The Degree Of [001] Preferred Growth Of Ni(Oh)2 Nanoplates, Taotao Li, Ning Dang, Wanggang Zhang, Wei Liang, Fuqian Yang
Determining The Degree Of [001] Preferred Growth Of Ni(Oh)2 Nanoplates, Taotao Li, Ning Dang, Wanggang Zhang, Wei Liang, Fuqian Yang
Chemical and Materials Engineering Faculty Publications
Determining the degree of preferred growth of low-dimensional materials is of practical importance for the improvement of the synthesis methods and applications of low-dimensional materials. In this work, three different methods are used to analyze the degree of preferred growth of the Ni(OH)2 nanoplates synthesized without the use of a complex anion. The results suggest that the preferred growth degree of the Ni(OH)2 nanoplates calculated by the March parameter and the expression given by Zolotoyabko, which are based on the analysis and texture refinement of the X-ray diffraction pattern, are in good accordance with the results measured by …
Cellulose-Specific Type B Carbohydrate Binding Modules: Understanding Oligomeric And Non-Crystalline Substrate Recognition Mechanisms, Abhishek A. Kognole, Christina M. Payne
Cellulose-Specific Type B Carbohydrate Binding Modules: Understanding Oligomeric And Non-Crystalline Substrate Recognition Mechanisms, Abhishek A. Kognole, Christina M. Payne
Chemical and Materials Engineering Faculty Publications
Background: Effective enzymatic degradation of crystalline polysaccharides requires a synergistic cocktail of hydrolytic enzymes tailored to the wide-ranging degree of substrate crystallinity. To accomplish this type of targeted carbohydrate recognition, nature produces multi-modular enzymes, having at least one catalytic domain appended to one or more carbohydrate binding modules (CBMs). The Type B CBM categorization encompasses several families (i.e., protein folds) of CBMs that are generally thought to selectively bind oligomeric polysaccharides; however, a subset of cellulose-specific CBM families (17 and 28) appear to bind non-crystalline cellulose more tightly than oligomers and in a manner that discriminates between surface topology.
Results: …
High-Throughput Assessment Of A Novel, Thiol-Acrylate Hydrogel For Tumor Spheroid Synthesis In A Microfluidic Device, Nathan Daniel Kersker
High-Throughput Assessment Of A Novel, Thiol-Acrylate Hydrogel For Tumor Spheroid Synthesis In A Microfluidic Device, Nathan Daniel Kersker
LSU Master's Theses
The extracellular environment plays an important role in regulating cell behavior. The mechanical, structural, and compositional properties of the extracellular matrix can determine the fate of the growing cells. Standard two-dimensional culturing in a flask fails to represent a native cellular environment. To create the native environment suitable for cells, hydrogels were previously studied. One of the most extensively studied synthetic hydrogels was a poly(ethylene glycol diacrylate) (PEGDA) hydrogel. However, the need for UV polymerization may introduce unwanted changes in cell morphology and viability. The hydrogel being proposed was a form of a thiol-acrylate hydrogel that can eliminate this problem …
Highly Porous Ceramic Material And Method Of Using And Forming The Same, Alan W. Weimer, Xinhua Liang
Highly Porous Ceramic Material And Method Of Using And Forming The Same, Alan W. Weimer, Xinhua Liang
Chemical and Biochemical Engineering Faculty Research & Creative Works
The present invention generally relates to porous ceramic material and to methods of making and using the material. More particularly, the invention relates to methods of forming ceramic materials by depositing material, using atomic layer deposition, onto a sacrificial substrate and to ceramic materials having controlled wall thickness, relatively large pores, and high surface area by weight.
Dynamic Optimization Of High-Altitude Solar Aircraft Trajectories Under Station-Keeping Constraints, R. Abraham Martin, Nathaniel S. Gates, Andrew Ning, John Hedengren
Dynamic Optimization Of High-Altitude Solar Aircraft Trajectories Under Station-Keeping Constraints, R. Abraham Martin, Nathaniel S. Gates, Andrew Ning, John Hedengren
Faculty Publications
This paper demonstrates the use of nonlinear dynamic optimization to calculate energy-optimal trajectories for a high-altitude, solar-powered unmanned aerial vehicle (UAV). The objective is to maximize the total energy in the system while staying within a 3 km mission radius and meeting other system constraints. Solar energy capture is modeled using the vehicle orientation and solar position, and energy is stored both in batteries and in potential energy through elevation gain. Energy capture is maximized by optimally adjusting the angle of the aircraft surface relative to the sun. The UAV flight and energy system dynamics are optimized over a 24 …
Linking Lignin Source With Structural And Electrochemical Properties Of Lignin-Derived Carbon Materials, Wenqi Li, Yan Zhang, Lalitendu Das, Yikai Wang, Mi Li, Namal Wanninayake, Yunqiao Pu, Doo Young Kim, Yang-Tse Cheng, Arthur J. Ragauskas, Jian Shi
Linking Lignin Source With Structural And Electrochemical Properties Of Lignin-Derived Carbon Materials, Wenqi Li, Yan Zhang, Lalitendu Das, Yikai Wang, Mi Li, Namal Wanninayake, Yunqiao Pu, Doo Young Kim, Yang-Tse Cheng, Arthur J. Ragauskas, Jian Shi
Biosystems and Agricultural Engineering Faculty Publications
Valorization of lignin to high-value chemicals and products along with biofuel production is generally acknowledged as a technology platform that could significantly improve the economic viability of biorefinery operations. With a growing demand for electrical energy storage materials, lignin-derived activated carbon (AC) materials have received increasing attention in recent years. However, there is an apparent gap in our understanding of the impact of the lignin precursors (i.e., lignin structure, composition and inter-unit linkages) on the structural and electrochemical properties of the derived ACs. In the present study, lignin-derived ACs were prepared under identical conditions from two different lignin …
Nanoparticle Catalytic Enhancement Of Carbon Dioxide Reforming Of Methane For Hydrogen Production, Nicholas Groden
Nanoparticle Catalytic Enhancement Of Carbon Dioxide Reforming Of Methane For Hydrogen Production, Nicholas Groden
Doctoral Dissertations
The U.S. produces 5559.6 million metric tons of carbon dioxide annually, of which 21% is produced by industrial processes. Steam reforming, an industrial process that accounts for 95% of all hydrogen production in industry, produces 134.5 million metric tons of carbon dioxide or around 11% of the total carbon dioxide produced by industry. This carbon dioxide is then either emitted or goes through a sequestration process that accounts for 75% of the plant's operational costs. An alternative reaction to steam reforming is dry reforming, which utilizes carbon dioxide rather than emitting it and can be used in conjunction with current …
Effect Of Cross-Section-Change Induced Advective Flow On The Primary Dendrite Array Morphology Of Hypoeutectic Pb-Sb Alloys During Directional Solidification, K. Pandit, S. R. Upadhyay, Surendra N. Tewari
Effect Of Cross-Section-Change Induced Advective Flow On The Primary Dendrite Array Morphology Of Hypoeutectic Pb-Sb Alloys During Directional Solidification, K. Pandit, S. R. Upadhyay, Surendra N. Tewari
Chemical & Biomedical Engineering Faculty Publications
The morphology and distribution of primary dendrites have been examined in Pb-2.2, 5.8 and 10.8 wt. pct. Sb alloy samples directionally solidified (DSed) in ampoules shaped like an hour-glass to examine the influence of cross-section change induced advective flow on the cellular/dendritic interface. This sample design increases the advective flow of the melt towards the array tips, as the liquid-solid interface enters the neck of the ampoule, and then decreases it as the interface exits the neck. The warm solute-rich melt flowing towards the growth front suppresses the extent of side-branching, decreases the primary dendrite spacing, and increases the primary …
Apparatus, Methods And Systems For Fabricating Thin Nanoporous Membranes, Sankar Nair, Jeffrey H. Drese, Kiwon Eum, Ryan P. Lively, Ali A. Rownaghi, Yash Tamhankar, Shaowei Yang
Apparatus, Methods And Systems For Fabricating Thin Nanoporous Membranes, Sankar Nair, Jeffrey H. Drese, Kiwon Eum, Ryan P. Lively, Ali A. Rownaghi, Yash Tamhankar, Shaowei Yang
Chemical and Biochemical Engineering Faculty Research & Creative Works
Embodiments of the present disclosure provide apparatuses, methods and systems for scalable fabrication of thin, nanoporous membranes useful in industrial applications. One embodiment of the present disclosure provides a molecular separation device configured to efficiently separate molecular species. In this particular embodiment, porous hollow fibers form a supporting scaffold for synthesis of a molecular organic framework (MOF) membrane. The MOF membrane may be synthesized on the inner or outer porous hollow fiber surface as well as within the porous fiber wall. Embodiments of the present disclosure provide a variety of methods for producing the aforementioned molecular separation devices as well …
Rate-Determining Step And Active Sites Probing For Platinum-Group-Metal Free Cathode Catalyst In Fuel Cell, Yechuan Chen
Rate-Determining Step And Active Sites Probing For Platinum-Group-Metal Free Cathode Catalyst In Fuel Cell, Yechuan Chen
Chemical and Biological Engineering ETDs
With the increasing demand on renewable energy, the fuel cell has attracted more and more interests because of its large power density and controllable size. However, the insufficiency of element abundance and unstable expensive price of conventional platinum-based electrocatalysts used in anode and cathode makes it essential to find their substitutes. As one of the most promising candidates to be used in cathode for oxygen reduction reaction (ORR), iron-nitrogen-carbon (Fe-N-C) catalysts have been widely investigated and get commercialized recently, but still lacks comprehensive understanding on the kinetic mechanism.
This dissertation has been divided into three parts with a discussion on …
Micro-Flow Nanocatalysis: Synergic Effect Of Tfoh@Spions And Micro-Flow Technology As An Efficient And Robust Catalytic System For The Synthesis Of Plasticizers, Maryam Tashi, Behnaz Shafiee, Yoshie Sakamaki, Ji-Yun Hu, Zachary Heidrick, Ahmad R. Khosropour, M. Hassan Beyzavi
Micro-Flow Nanocatalysis: Synergic Effect Of Tfoh@Spions And Micro-Flow Technology As An Efficient And Robust Catalytic System For The Synthesis Of Plasticizers, Maryam Tashi, Behnaz Shafiee, Yoshie Sakamaki, Ji-Yun Hu, Zachary Heidrick, Ahmad R. Khosropour, M. Hassan Beyzavi
Chemistry & Biochemistry Faculty Publications and Presentations
The combination of continuous flow technology with immobilizing of only 0.13 mol% of triflic acid (TfOH) on silica-encapsulated superparamagnetic iron oxide nanoparticles (SPIONs) under solvent-free conditions successfully provided a powerful, efficient, and eco-friendly route for the synthesis of plasticizers. The turnover frequency value in micro-flow conditions varied in the range of 948.7 to 7384.6 h−1 compared to 403.8 to 3099 h−1 for in-flask. This technique works efficiently, encouraging future applications of micro-flow nano-catalysis in green chemistry.
An Investigation Of Conformality Of The Core-Shell Polymer Electrolyte Membrane (Pem) Fuel Cell Catalysts By Sputter Deposition, Mesut Yurukcu
An Investigation Of Conformality Of The Core-Shell Polymer Electrolyte Membrane (Pem) Fuel Cell Catalysts By Sputter Deposition, Mesut Yurukcu
Theses and Dissertations
Core-shell nanorod array geometry can offer enhanced durability for polymer electrolyte membrane (PEM) fuel cell electrodes if a catalyst shell is conformally coated around the nanorod support base. Uniform catalyst shell coating can minimize the interaction of acidic fuel cell medium with the nanorod base and can improve the overall electrocatalyst electrode stability. However, fabrication of the conformal shell layers on nanorod arrays using physical vapor deposition (PVD) methods (e.g. sputtering, thermal evaporation) has been a formidable task. In order to assess the PVD conditions for the production of conformal shell coatings, Monte Carlo simulation methods (MC) can provide useful …
Controlled Nanomorphology Of Hybrid Organic/Inorganic Multi-Component Composites Through Cooperative Non-Covalent Interactions, Lingyao Meng
Controlled Nanomorphology Of Hybrid Organic/Inorganic Multi-Component Composites Through Cooperative Non-Covalent Interactions, Lingyao Meng
Shared Knowledge Conference
Hybrid organic–inorganic nanocomposite polymers, with inorganic nanoparticles embedded in organic matrix have emerged as a special category of multifunctional materials. With rational materials design, these hybrids can show the synergistic effect of the properties from both phases. Homogenous dispersion and orderly arrangement of the organic and inorganic components are key in their functionalities. By controlling the interface and corresponding interfacial interactions between the organic and inorganic entities, we have developed a logical approach to form stable and controlled hybrid nanofiber structures. We demonstrate the formation of hybrid polymer/quantum dots (or iron oxide nanoparticles) nanocomposites through non-covalent interactions (hydrogen bonding, ionic …
Avoiding Pitfalls In The Determination Of Reliable Electrochemical Kinetics Parameters For The Cu2+ → Cu1+ Reduction Reaction In Deep Eutectic Solvents, Dai Shen, Katherine Steinberg, Rohan Akolkar
Avoiding Pitfalls In The Determination Of Reliable Electrochemical Kinetics Parameters For The Cu2+ → Cu1+ Reduction Reaction In Deep Eutectic Solvents, Dai Shen, Katherine Steinberg, Rohan Akolkar
Faculty Scholarship
Deep eutectic solvents (DES), on account of their low-cost, non-flammability and electrochemical stability, are attracting attention for their potential use in applications such as electrodeposition and energy storage. In these applications, knowledge of the transport and electrochemical kinetics properties of DES is critically important. To date, attempts to measure the kinetics parameters of the Cu2+ +e Cu1+ reaction in ethaline DES have yielded a cathodic charge transfer coefficient (α) in the range of 0.2–0.3 suggesting an unexpected asymmetric polarization behavior. In the present work, we pursued a comprehensive study of the kinetics and transport properties of the aforementioned reaction. Using …
Performance Evaluation And Solutions For Port Congestion Focused On The Container Terminal : A Case Study Of Khalifa Bin Salman Port (Kbsp) Kingdom Of Bahrain, Mohamed Ebrahim A.S. Alhameedi, Abud Jamal Said, Tri Wahyunita Mudjiono
Performance Evaluation And Solutions For Port Congestion Focused On The Container Terminal : A Case Study Of Khalifa Bin Salman Port (Kbsp) Kingdom Of Bahrain, Mohamed Ebrahim A.S. Alhameedi, Abud Jamal Said, Tri Wahyunita Mudjiono
World Maritime University Dissertations
No abstract provided.
Enhanced Co2 Conversion By The Simultaneous Doping Of Co, Fe, And Mn In The B-Site Of A Lanthanum Perovskite, Adela E. Ramos
Enhanced Co2 Conversion By The Simultaneous Doping Of Co, Fe, And Mn In The B-Site Of A Lanthanum Perovskite, Adela E. Ramos
USF Tampa Graduate Theses and Dissertations
There is a pressing need for carbon dioxide (CO2) mitigation technologies as increasing emissions continue to threaten our environment. Carbon capture and storage (CCS) alone would not be able to achieve temperature rise below 2 °C. In addition, CCS cost increases considerably for power generation and other industries where CO2 separation is necessary. Conversion of CO2 to usable products is the most economical and feasible solution as it could offset CO2 separation cost. Liquid fuels are an attractive route since it is a commodity used globally and demand increases with population and economic growth. Conversion …
Application Of A Light Switchable System In Redirecting Escherichia Coli Metabolic Fluxes, Xintong Xia
Application Of A Light Switchable System In Redirecting Escherichia Coli Metabolic Fluxes, Xintong Xia
Graduate Theses - Chemical Engineering
Optogenetics has gained increasing attention for enabling reversible and non-invasive control in biochemical engineering. The purpose of this project is to investigate the application of a genetically engineered light-switchable system, Cph8-OmpR, for controlling the accumulation of the useful central metabolite glucose-6-phosphate (G6P) in Escherichia coli. This could be accomplished by linking expression of an adaptor protein, SspB, which increases enzyme phosphofructokinase (Pfk) degradation, with different light intensities. Pfk is the enzyme that catalyzes the conversion of fructose-6-phosphate (F6P), an isomer of G6P from an equilibrium reaction, to fructose 1,6-biphosphate for downstream metabolism. This step is considered the major control point …
Scaling Nonreactive Cross Flow Over A Heated Plate To Simulate Forest Fires, Nikolay Gustenyov, Nelson Akafuah, Ahmad Salaimeh, Mark A. Finney, Sara Mcallister, Kozo Saito
Scaling Nonreactive Cross Flow Over A Heated Plate To Simulate Forest Fires, Nikolay Gustenyov, Nelson Akafuah, Ahmad Salaimeh, Mark A. Finney, Sara Mcallister, Kozo Saito
Institute of Research for Technology Development Faculty Publications
The paper reports visualization of the flow of smoke over a flat surface inside of a low-speed wind tunnel. A heating plate flush mounted on the wind tunnel floor simulated a spreading line fire that produces uniform heat flux under constant wind speed condition. A paper-thin cloth was soaked with commercially available Vaseline and placed on top of the heating plate; when it is heated, it produced thick white smoke, ideal for flow visualization. Two sides and top of the wind tunnel were made of a trans- parent acrylic sheet that enabled LED and laser sheet light illumination of the …
Air Temperatures Tutorial, Nihad E. Daidzic
Air Temperatures Tutorial, Nihad E. Daidzic
Aviation Department Publications
No abstract provided.
A Discrete Element Method Study Of Granular Self-Organization In An Orbital-Driven Sphere And Computational Fluid Dynamics Simulations Of Slurry Flow In A Single-Loop Loop Reactor, Spencer Blum
Honors Capstones
No abstract provided.
Modeling Soot Formation Derived From Solid Fuels, Alexander Jon Josephson
Modeling Soot Formation Derived From Solid Fuels, Alexander Jon Josephson
Theses and Dissertations
Soot formation from complex solid fuels, such as coal or biomass, is an under-studied and little understood phenomena which has profound physical effects. Any time a solid fuel is combusted, from coal-burning power plants to wildland fires, soot formation within the flame can have a significant influence on combustion characteristics such as temperature, heat flux, and chemical profiles. If emitted from the flame, soot particles have long-last effects on human health and the environment. The work in this dissertation focuses on creating and implementing computational models to be used for predicting soot mechanisms in a combustion environment. Three models are …
Single Cell Analysis Of Fluid Shear Stress Induced Breast Cancer Cell Phenotypic Changes In A Microfluidic Device, Grant Landwehr
Single Cell Analysis Of Fluid Shear Stress Induced Breast Cancer Cell Phenotypic Changes In A Microfluidic Device, Grant Landwehr
Honors Capstones
No abstract provided.
Sorption Of Benzene, Toluene And Ethylbenzene By Plasticized Poly (Ethyl Methacrylate) Using Quartz Crystal Microbalance At 298.15k, Kiranpreet Kaur
Sorption Of Benzene, Toluene And Ethylbenzene By Plasticized Poly (Ethyl Methacrylate) Using Quartz Crystal Microbalance At 298.15k, Kiranpreet Kaur
USF Tampa Graduate Theses and Dissertations
Quartz crystal microbalances (QCM) are chemical sensors used for liquid and vapor sensing. In this thesis work, plasticized poly (ethyl methacrylate) (PEMA) coated QCM was used to study sorption behavior of benzene, ethylbenzene and toluene in respective polymer at 298.15K. Poly (ethyl methacrylate) (PEMA) is a promising polymer with solubility parameter close to BTEX compounds, but it's glassy and rigid nature at room temperature make it less sensitive. The addition of plasticizers (Diisononyl cyclohexane-1,2-dicarboxylate (DINCH) and Diisooctyl azelate (DIOA)) lowers the glass transition temperature, provides flexibility and thus increases the free volume of the polymer to enhance analyte sorption. In …
Multicellular Models Bridging Intracellular Signaling And Gene Transcription To Population Dynamics, Mohammad Aminul Islam, Satyaki Roy, Sajal K. Das, Dipak Barua
Multicellular Models Bridging Intracellular Signaling And Gene Transcription To Population Dynamics, Mohammad Aminul Islam, Satyaki Roy, Sajal K. Das, Dipak Barua
Computer Science Faculty Research & Creative Works
Cell signaling and gene transcription occur at faster time scales compared to cellular death, division, and evolution. Bridging these multiscale events in a model is computationally challenging. We introduce a framework for the systematic development of multiscale cell population models. Using message passing interface (MPI) parallelism, the framework creates a population model from a single-cell biochemical network model. It launches parallel simulations on a single-cell model and treats each stand-alone parallel process as a cell object. MPI mediates cell-to-cell and cell-to-environment communications in a server-client fashion. In the framework, model-specific higher level rules link the intracellular molecular events to cellular …