Engineering Commons^™

Mutational Analysis Of Latency Associated Peptide For Therapeutic Application, Johnny Will Stephens

USF Tampa Graduate Theses and Dissertations

TGF-β is an important protein for regulation of the immune system, and has been linked to promotion of tumor progression and cancer growth. Inhibiting TGF-β has been shown to be an effective therapeutic technique for fighting multiple cancer types. Engineering TGF-β’s natural inhibitor, Latency Associated Peptide (LAP), to improve its biophysical properties has potential to increase therapeutic efficacy.

Rosetta and FoldX can be used in concert to engineer stabilizing mutations of proteins. In accordance with this, PyRosetta and FoldX were used to predict stabilizing mutations of LAP. The most stabilizing mutations from each program were combined with mutually predicted mutations. …

Nanoparticles For Targeted Drug Delivery To Cancer Stem Cells: A Review Of Recent Advances, Yavuz Nuri Ertas, Keyvan Abedu Dorcheh, Ali Akbari, Esmaiel Jabbari

Faculty Publications

Cancer stem cells (CSCs) are a subpopulation of cells that can initiate, self-renew, and sustain tumor growth. CSCs are responsible for tumor metastasis, recurrence, and drug resistance in cancer therapy. CSCs reside within a niche maintained by multiple unique factors in the microenvironment. These factors include hypoxia, excessive levels of angiogenesis, a change of mitochondrial activity from aerobic aspiration to aerobic glycolysis, an upregulated expression of CSC biomarkers and stem cell signaling, and an elevated synthesis of the cytochromes P450 family of enzymes responsible for drug clearance. Antibodies and ligands targeting the unique factors that maintain the niche are utilized …

Preparation And Characterization Of Single Layer Conducting Polymer Electrochromic And Touchchromic Devices, Sharan Kumar Indrakar

USF Tampa Graduate Theses and Dissertations

Electrochromic devices (ECDs) have triggered great interest because of their potential applicability in energy-efficient buildings and low power display systems, including reflective type smart windows/mirrors and wearable-flexible devices. In the past decades, electrochromic technologies with different device structures and materials have been proposed. The idea of employing a simple device structure with a durable, cost effective electrolyte is crucial to designing and manufacturing high-performance ECDs. With this idea in mind, this thesis describes the various efforts to develop a simple ECD comprising of a composite single active layer gel electrolyte, sandwiched between two transparent conducting electrodes, lasting over 10,000 cycles …

Phase-Field Modeling Of The Polymer Membrane Formation Process For Micro- And Ultra-Filtration, Michael Rosario Cervellere

Graduate Theses and Dissertations

Porous polymer membrane filters are widely used in separation and filtration process. Micro- and ultra-filtration membranes are commonly used in biopharmaceutical applications such as filtering viruses and separating proteins from a carrier solution. The formation of these membrane filters via phase inversion is a complex and interconnected process where varying casting conditions can have a wide variety of effects on the final membrane morphol- ogy. Tailoring membrane filters for specific performance characteristics is a tedious and time consuming process. The time and length scales of membrane formation make it extremely difficult to experimentally observe membrane formation. Modeling the membrane formation …

Investigation Of Polymer-Plasticizer Blends For Btex Detection Using Quartz Crystal Microbalance, Abhijeet Iyer

USF Tampa Graduate Theses and Dissertations

Volatile organic compounds (VOCs) are chemicals that evaporate easily and become gases at ambient temperature and pressure. The EPA has made the monitoring of VOCs mandatory due to their health impacts, which range from headaches and nausea to cancer. The current techniques used for VOC monitoring such as photoionization, gas chromatography, mass spectroscopy, and e-noses sensors are expensive, time-intensive, demand rigorous sample preparation, and cannot quantify the VOCs in the air. Chemical sensors based on piezoelectric transduction like the quartz crystal microbalance (QCM) show promising results in terms of providing cost-effective real-time data, robustness, and low power requirements. In this …

Investigation Of Iron-Nickel Based Nanoparticles As Catalysts For Oxygen Evolution Reaction (Oer), Prashant Acharya

Graduate Theses and Dissertations

Hydrogen fuel is increasingly seen as an appealing alternative by both the scientific and the industrial communities in the drive towards a clean energy future. Hydrogen, unlike fossil-based fuels, does not release carbon dioxide, a chief component of greenhouse gases, upon combustion. However, more than 95% of the hydrogen in the world is still produced by burning fossil fuels as this method is currently the only economically feasible option at a large industrial scale.

Water electrolysis shows a lot of potential in both hydrogen generation and in the storage of energy from renewable sources such as wind and sunlight. Likewise, …

Solvent Effect Modeling In Heterogenous Catalysis, Mehdi Zare

Theses and Dissertations

In recent years, the biorefining industry and biofuels have emerged as a major American energy sector. Biofuels are fuels produced from plant and animal material, also referred to as biomass. This includes wood products, manure, and corn, among other materials. Compared to fossil fuels, biofuels are significantly more environmentally friendly and thus pose less of a threat to environmental health. In 2019, the United States consumed around 14.54 billion gallons of ethanol and around 1.81 billion gallons of biodiesel. By 2030, the United States is expected to consume around 95 Mtoe of biofuels. In order to meet current demand and …

Mechanisms Of Spontaneous Curvature Inversion In Compressed Graphene Ripples For Energy Harvesting Applications Via Molecular Dynamics Simulations, James M. Mangum, Ferdinand Harerimana, Millicent N. Gikunda, Paul M. Thibado

Physics Faculty Publications and Presentations

Electrically conductive, highly flexible graphene membranes hold great promise for harvesting energy from ambient vibrations. For this study, we built numerous three-dimensional graphene ripples, with each featuring a different amount of compression, and performed molecular dynamics simulations at elevated temperatures. These ripples have a convex cosine shape, then spontaneously invert their curvature to concave. The average time between inversion events increases with compression. We use this to determine how the energy barrier height depends on strain. A typical convex-to-concave curvature inversion process begins when the ripple’s maximum shifts sideways from the normal central position toward the fixed outer edge. The …

An Investigation Of Strong Electrostatic Adsorption Using Formed Commercial Supports, Connor Brendan Mcdonough

Theses and Dissertations

Strong electrostatic adsorption (SEA) is a well-tested procedure for the synthesis of supported monometallic and bimetallic nanoparticles with ultrasmall size (< 2 nm). Where, previous studies have laid the foundation for SEA using a variety of powdered supports, catalysts in this form are not suited for large volume chemical applications where pressure drop is critical to the process economics. Although there is no fundamental difference between the surface functional groups on powdered and extruded supports, the present study examined electrostatic adsorption as it relates to proton diffusion, precursor diffusion, and capillary imbibition.

Three formed alumina spheres and one carbon extrudate were selected for study. The alumina spheres, provided by BASF, were developmental materials with varying pore size distributions between 12 and 24800 angstroms. The carbon, provided by ADM and manufactured by CABOT, was strictly microporous in structure and was included to investigate the differences in mass transport as a function of support material.

Results indicated, a significant limitation in the approach to pH equilibrium comparing formed alumina spheres with the same …

A Portable Point-Of-Care Device Using Joule Heating And Latent Energy Storage For The Temperature Regulation Of Isothermal Nucleic Acid Amplification Tests, Aubrey Lynn Schultz

Graduate Theses and Dissertations

Accurate and early diagnosis of infectious diseases extremely important. Rapid diagnosis allows for effective treatment and increases the chance for recovery without complications. Additionally, the ability to test the populace frequently, swiftly, and affordably significantly aids in containing wide-scale outbreaks. In terms of specificity and sensitivity, nucleic acid amplification tests (NAAT) are one of the best options for diagnosing infectious diseases. Isothermal NAATS present a unique opportunity to create diagnostic tests deployed at a Point-of-Care (POC) level. Specifically, loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA) have the potential to deliver reliable POC diagnostics in low-resource settings. When designing …

Electrochemical Deposition In Energy Storage Devices, Witness Atutala Martin

Graduate Theses and Dissertations

Metals, whether in a solid or soluble ion form, are a vital part of any electrochemical storage system. More so, Li metal is widely considered as the ideal anode because of its low density and low electrochemical potential (-3.04 V vs. the standard hydrogen electrode – SHE). However, just like most metals, it does not plate or strip evenly during cycling which can lead to cycling performance issues, short cycling lifespans, and even safety concerns brought about by dendrites that can cause internal short-circuiting within cells. This research focused on investigating the electroplating of metals in both aqueous and non-aqueous …

Heterogeneous Extended Langmuir Model With A Truncated Multi-Normal Energy Distribution For Fitting Unary Data And Predicting Mixed-Gas Adsorption Equilibria, Sofia Tosso

Theses and Dissertations

A heterogeneous extended Langmuir model (HEL) that uses a truncated frequency energy distribution based on a one, two or three normal distributions is presented to predict gas adsorption mixtures of single, binary, and ternary gas experimental data involving CO2, H2S and C3H8 on H-modernite reported in the work of Ritter et al (1986) in terms of both solid phase molar fractions and total loadings. These models were initially fitted against single gas data and then used to predict binary data and to establish the type of perfect correlations, whether positive or negative, exist amongst these three species. The models then …

Investigation Of Membrane Based Processes For Biomedical Applications, Efecan Pakkaner

Graduate Theses and Dissertations

As substantial developments were achieved in nanotechnology and polymer engineering, especially in the last few decades, the use of membranes and membrane-based procedures was found to be expanding into more and more research and development areas; including biological engineering, life sciences and biomedical engineering. Not only have they been the main focus of meaningful research, but they have also been the main pieces of the solutions to very thorny problems encountered within a wide range of applications from microfluidics to water treatment, thanks to their versatility, cost-effectiveness and biocompatibility, when compared to conventional separation techniques. To celebrate and embrace these …

Distributed Modeling Approach For Electrical And Thermal Analysis Of High-Frequency Transistors, Amirreza Ghadimi Avval

Graduate Theses and Dissertations

The research conducted in this dissertation is focused on developing modeling approaches for analyzing high-frequency transistors and present solutions for optimizing the device output power and gain. First, a literature review of different transistor types utilized in high-frequency regions is conducted and gallium nitride high electron mobility transistor is identified as the promising device for these bands. Different structural configurations and operating modes of these transistors are explained, and their applications are discussed. Equivalent circuit models and physics-based models are also introduced and their limitations for analyzing the small-signal and large-signal behavior of these devices are explained. Next, a model …

Flavour Chemicals, Synthetic Coolants And Pulegone In Popular Mint-Flavoured And Menthol-Flavoured E-Cigarettes., Esther E. Omaiye, Wentai Luo, Kevin J. Mcwhirter, James F. Pankow, Prue Talbot

Civil and Environmental Engineering Faculty Publications and Presentations

The Food and Drug Administration (FDA) has recently banned flavours from pod-style electronic cigarettes (e-cigarettes), except for menthol and tobacco. JUUL customers have quickly discovered that flavoured disposable e-cigarettes from other manufacturers, such as Puff, are readily available. Our goal was to compare flavour chemicals, synthetic coolants and pulegone in mint-flavoured/menthol-flavoured e-cigarettes from JUUL and Puff, evaluate the cytotoxicity of the coolants and perform a cancer risk assessment for pulegone, which is present in both JUUL pods and disposable Puff products.

Facile Fabrication And Characterization Of Kraft Lignin@Fe3o4 Nanocomposites Using Ph Driven Precipitation: Effects On Increasing Lignin Content, Frankie A. Petrie, Justin M. Gorham, Robert T. Busch, Serhiy O. Leontsev, Esteban E. Ureña-Benavides, Erick S. Vasquez

Chemical and Materials Engineering Faculty Publications

This work offers a facile fabrication method for lignin nanocomposites through the assembly of kraft lignin onto magnetic nanoparticles (Fe3O4) based on pH-driven precipitation, without needing organic solvents or lignin functionalization. Kraft lignin@Fe3O4 multicore nanocomposites fabrication proceeded using a simple, pH-driven precipitation technique. An alkaline solution for kraft lignin (pH 12) was rapidly injected into an aqueous-based Fe3O4 nanoparticle colloidal suspension (pH 7) under constant mixing conditions, allowing the fabrication of lignin magnetic nanocomposites. The effects of increasing lignin to initial Fe3O4 mass content (g/g), increasing in ratio from 1:1 to 20:1, are discussed with a complete chemical, structural, and …

Preparation Of Co1-XS-Mns@Cnts/Cnfs For Electrocatalytic Oxygen Reduction Reaction, Fang-Yan Liu, Qian Zhang, Yue-Kun Li, Feng Huang, Meng-Ye Wang

Journal of Electrochemistry

As an important cathode reaction in fuel cells and metal-air batteries, oxygen reduction reaction (ORR) is a complex reaction of slow kinetics, which severely limits performances of fuel cells and metal-air batteries. Therefore, it is of key importance to find an efficient and stable electrocatalyst to promote ORR. Carbon-based materials, which possess high conductivity, good stability and large specific surface area, are usually used in electrocatalytic ORR. However, pure carbon-based materials exhibit low efficiency. Coupling carbon-based materials with manganese (Mn) and cobalt (Co) transition metals containing 3d orbitals is an effective way to improve electrocatalytic performance. Herein, carbon nanofibers containing …

Identification Of Key Persons In The Information Security Incident Management Process And Distribution Of Roles Between Them, Fayzullajon Bakhtiyorovich Botirov, Sharifjon Rakhimovich Gafurov, Azam Anvorovich Gafurov

Chemical Technology, Control and Management

This research paper is devoted to the process of information security incident management and the distribution of the roles of key persons in this process. The skills required for members of the information security incident response team are considered, positions and responsibilities are given - typical positions that exist in each organization, testing and improvement procedures are given, the role of the information security incident response team members and employee positions is shown. The quality of the group leader is reflected; responsible for personnel management, scoping and reporting on the state of the organization at a higher level of the …

Reviewing Technologies And Devices For Drying Grain And Oilseeds, Jalolitdin Pakhritdinovich Mukhitdinov, Elyorbek Xasanovich Safarov

Chemical Technology, Control and Management

The article analyzes the operation of the most commonly used dryers for drying sunflowers and other agricultural cereals. Based on the study of drying technology and methods, the advantages and disadvantages of dryers have been analyzed, the results of comparisons of their technical indicators have been presented in tabular form. In the form of a diagram, an analysis of foreign and domestic patent data obtained over the past 10 years for the considered drying devices was presented. The choice of the most suitable installation was carried out on the basis of the compiled analytical table. In order to improve the …

Results Of X-Ray Phase And Ir-Spectral Analysis Of Azosuperphosphates Obtained On The Basis Of Phosphorites Of Central Kizilkum, Elyor Atashev, Maksud Jabbievich Jumaniyazov, Sayfitdin Mukhitdinovich Tadjiev

Chemical Technology, Control and Management

This article is devoted to the use of ammonium sulfate in the production of nitrogen-phosphorus fertilizers, which are widely used in agriculture today. In the research work, the possibilities of obtaining azo superphosphate are described in detail by the use of intensive technology based on low-grade phospharites of the Central KyzylKum. X-ray and IR-spectroscopic analyzes of a new type of NP-complex fertilizers obtained using a solution of ammonium sulfate in sulfuric acid are described in detail. The X-ray analysis of the obtained sample on the X-ray diffraction pattern of the azo-superphosphate fertilizer revealed the appearance of peaks in the interplanar …

Developing Algorithms For Automating The Processes Of Forming The Optimal Structural Composition Of Production - Technological Modules, Alisher Mamajanov, Sarvar Botir Ugli Nabiyev

Chemical Technology, Control and Management

In this research, we developed appropriate algorithms for the formation of the optimal structural composition of production - technological modules (PTM) based on the automation of the processes of determining and ensuring the functional-parametric compatibility (FPC) of their components. These algorithms are based on the developed mathematical models on the basis of the use of analytical methods for implementing the interconnection between the main components of the PTM.

Models And Fuzzy Microclimate Control System In The Storage Of Archival Documents, Avaz Marakhimov Scd, Prof, Abdushukur Abdullaev

Chemical Technology, Control and Management

In this article, the main object of research is the creation of appropriate microclimatic conditions to ensure reliable and high-quality storage of archival documents, as well as automatic control of the optimal values of the main parameters of the external and internal environment that directly affect the quality of storage. To control the microclimate, three categories of models for automatic control of these parameters are considered separately in the archives: the “white box”, “black box” and “gray box " models. The results of the analysis of the advantages and disadvantages of the considered models are presented. The generalized structure …

Enterprise Engineering And Intellectual Technologies For Lifecycle Management Of Industrial Production, Nodirbek Rustambekovich Yusupbekov, Valery Borisovich Tarasov, Shukhrat Manapovich Gulyamov, Fahritdin Raupovich Abdurasulov

Chemical Technology, Control and Management

The fundamental scientific problem of the development of the mathematical foundations of engineering for industrial enterprises and the development of mathematical methods of production management, as well as the creation of intelligent systems for coordinated management of the life cycles of products and production in the network of enterprises are discussed. The issues in demand in the development of a vast interdisciplinary field of enterprise engineering and the development of modern network enterprises and intelligent production using mathematical modeling methods are discussed.

A Study On Dynamic Characteristics Of A New Remote Transformer Current Converter Without Compensating Capacitor, Sulton Faizullaevich Amirov, Nargisa Kamilovna Babanazarova, Nurullo Rahmatullaevich Yuldashev

Chemical Technology, Control and Management

In this research paper, analytical equations of the transient characteristics of a new remote transformer current converter without a compensating capacitor have been obtained when a stepwise, linearly increasing, sinusoidal and sinusoidal with a damped amplitude of effects was applied to their input. It has been shown that the developed current converter can be represented in the structural schemes of monitoring and control systems in the form of a series-connected real differentiating link without statism and inertial (aperiodic) link of the first order, and in the case of neglecting active losses in the magnetic circuit and when the converter is …

Issues In Functioning Efficiency Of Security Monitoring Systems In Infocommunication Systems, Majid Karimov Malikovich, Sevara Khamdamova Mirazizovna

Chemical Technology, Control and Management

The security monitoring system (SMS) receives information from the means of protection, detecting attacks, systems for monitoring the functioning of information communication systems (ICS) and performs adaptive security management of ICS, providing a flexible response of the security system to the actions of the intruder. In this case, the result of the functioning of the SMB are recommendations for modifying the ICS security system, in accordance with the specified restrictions, in order to minimize the possible damage from the implementation of threats. A complex of security systems is used in modern ICS. Typically, different systems are not linked and are …

Synthesis And Electrochemical Study Of Cuau Nanodendrites For Co2 Reduction, Dylan Siltamaki, Shuai Chen, Farnood Rahmati, Jacek Lipkowski, Ai-Cheng Chen

Journal of Electrochemistry

The conversion of carbon dioxide (CO₂) to carbon monoxide (CO) and other value-added products is an interesting approach for carbon-containing fuel synthesis using renewable and clean energy. The electrochemical reduction of CO₂ is one of the promising strategies for the storage of intermittent renewable energy resources. The development of electrocatalysts with high activity and stability is vital in the electrochemical CO₂ reduction process. In this study, copper and gold alloyed (CuAu) electrodes with nanodendritic structures were synthesized using a facile electrodeposition method. The CuAu nanodendrites with the atomic ratio of Cu to Au being approximately 1:1 …

Problem Solving Methods For Synthesis Of Physical Principles Of Mechatronic Module Operations In Intelligent Robotic Systems, Nazarov Khayriddin Nuritdinovich

Chemical Technology, Control and Management

The scientific paper investigates the methods for solving problems of synthesis of physical principles of operation of mechatronic modules of intelligent robotic systems are considered.

In addition, it deals with the specifics of the process of synthesis of the physical principles of the operation of mechatronic modules using predicate models, list models and information matrices of physical and technical effects.

It shows the interpretation of the components of the model of the system for the synthesis of the physical principles of operation of mechatronic modules of intelligent robotic systems and automatic control and the features of the synthesis algorithm for …

Recent Advances In Glycerol Electrooxidation On Pt And Pd: From Reaction Mechanisms To Catalytic Materials, Wei-Yi Zhang, Xian-Yin Ma, Shou-Zhong Zou, Wen-Bin Cai

Journal of Electrochemistry

The conversion of glycerol to value-added products has received considerable attention recently because the booming biodiesel industry produces a large amount of glycerol as a byproduct. Among various means, electrocatalytic oxidation of glycerol is appealing owing to its environmental friendliness and high efficiency. However, electrooxidation of glycerol is very complex, involving multiple electron and proton transfer processes with many reaction pathways. How to rationally design catalysts with high selectivity toward targeted products is an overarching challenge, and of both fundamental and practical significance. In this minireview we aim to provide an overview of recent advancements in electrooxidation of glycerol focusing …

Sealant Injectivity Through Void Space Conduits To Assess Remediation Of Well Cement Failure, Mohammed Alkhamis, Abdulmohsin Imqam

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The primary cement of oil and gas wells is prone to fail under downhole conditions. Thus, a remedial operation must be conducted to restore the wellbore integrity and provides zonal isolation. Many types of materials are currently used and/or have the potential to be employed in wellbore integrity applications, including, but not limited to, conventional Portland cement, microfine and ultrafine cement, thermoset materials, and thermoplastic materials. In this study, several types of materials were selected for evaluation: (1) conventional Portland cement, which is the most widely used in remedial operations in the petroleum industry, (2) polymer resin, which is one …

Creation And Application Of Various Tools For The Reconstruction, Curation, And Analysis Of Genome-Scale Models Of Metabolism, Wheaton L. Schroeder

Department of Chemical and Biomolecular Engineering: Dissertations, Theses, and Student Research

Systems biology uses mathematics tools, modeling, and analysis for holistic understanding and design of biological systems, allowing the investigation of metabolism and the generation of actionable hypotheses based on model analyses. Detailed here are several systems biology tools for model reconstruction, curation, analysis, and application through synthetic biology. The first, OptFill, is a holistic (whole model) and conservative (minimizing change) tool to aid in genome-scale model (GSM) reconstructions by filling metabolic gaps caused by lack of system knowledge. This is accomplished through Mixed Integer Linear Programming (MILP), one step of which may also be independently used as an additional curation …