Open Access. Powered by Scholars. Published by Universities.®

Digital Commons Network™

Open Access. Powered by Scholars. Published by Universities.®

Discipline
Institution
Keyword
Publication Year
Publication
Publication Type
File Type

Articles 81331 - 81360 of 819726

Full-Text Articles in Entire DC Network

Church Leaders' Perception Of Their Role In The Deterrence Of Juvenile Reincarceration, Sherine Sandrea Brown-Thomas Feb 2024

Church Leaders' Perception Of Their Role In The Deterrence Of Juvenile Reincarceration, Sherine Sandrea Brown-Thomas

Walden Dissertations and Doctoral Studies

In 2019, U.S. law enforcement officers detained almost 700,000 juveniles under the age of 18. The U.S. Department of Justice Office of Juvenile Justice and Delinquency Prevention stated that 55% of juveniles were rearrested within a year, and after that, 24% of juveniles were reincarcerated within a year. The purpose of this multiple case study was to explore church leaders’ perceptions of their role, experiences, and activities in contributing to reducing the risk of reincarceration of juvenile offenders, and to create a model for other community leaders. The conceptual framework for the study was Shaw and McKay’s social disorganization theory. …


3-Chloropropylbis(Catecholato)Silicate As A Bifunctional Reagent For The One-Pot Synthesis Of Tetrahydroquinolines From O-Bromosulfonamides, Noah Brodsky, Nidheesh Phadnis, Mohamed Ibrahim, Isabel M. Andino, Inés Blanc Giro, John A. Milligan Feb 2024

3-Chloropropylbis(Catecholato)Silicate As A Bifunctional Reagent For The One-Pot Synthesis Of Tetrahydroquinolines From O-Bromosulfonamides, Noah Brodsky, Nidheesh Phadnis, Mohamed Ibrahim, Isabel M. Andino, Inés Blanc Giro, John A. Milligan

College of Life Sciences Faculty Papers

Bis(catecholato)silicate salts are easily accessible reagents that can be used to install alkyl fragments through photoredox-enabled cross-coupling. These reagents can incorporate various functional groups including pendant alkyl halides. A halogenated organosilicate reagent was leveraged to develop a one-pot synthesis of tetrahydroquinolines from o-bromosulfonamides, where the bifunctional reagent participates in a nickel/photoredox cross-coupling followed by intramolecular nucleophilic substitution. The functional group tolerance of this cross-coupling strategy allowed for the preparation of a series of substituted tetrahydroquinolines.


Women’S Subsistence Strategies Predict Fertility Across Cultures, But Context Matters, Abigail E. Page, Erik J. Ringen, Jeremy Koster, Monique Borgerhoff Mulder, Karen Kramer, Mary K. Shenk, Jonathan Stieglitz, Kathrine Starkweather, John P. Ziker, Adam H. Boyette, Heidi Colleran, Cristina Moya, Juan Du, Siobhán M. Mattison, Russell Greaves, Chun-Yi Sum, Ruizhe Liu, Sheina Lew-Levy, Francy Kiabiya Ntamboudila, Sean Prall, Mary C. Towner, Tami Blumenfield, Andrea B. Migliano, Daniel Major-Smith, Mark Dyble, Gul Deniz Salali, Nikhil Chaudhary, Inez E. Derkx, Cody T. Ross, Brooke A. Scelza, Michael D. Gurven, Bruce P. Winterhalder, Carmen Cortez, Luis Pacheco-Cobos, Ryan Schacht, Shane J. Macfarlan, Donna Leonetti, Jennifer C. French, Nurul Alam, Fatema Tuz Zohora, Hillard S. Kaplan, Paul L. Hooper, Rebecca Sear Feb 2024

Women’S Subsistence Strategies Predict Fertility Across Cultures, But Context Matters, Abigail E. Page, Erik J. Ringen, Jeremy Koster, Monique Borgerhoff Mulder, Karen Kramer, Mary K. Shenk, Jonathan Stieglitz, Kathrine Starkweather, John P. Ziker, Adam H. Boyette, Heidi Colleran, Cristina Moya, Juan Du, Siobhán M. Mattison, Russell Greaves, Chun-Yi Sum, Ruizhe Liu, Sheina Lew-Levy, Francy Kiabiya Ntamboudila, Sean Prall, Mary C. Towner, Tami Blumenfield, Andrea B. Migliano, Daniel Major-Smith, Mark Dyble, Gul Deniz Salali, Nikhil Chaudhary, Inez E. Derkx, Cody T. Ross, Brooke A. Scelza, Michael D. Gurven, Bruce P. Winterhalder, Carmen Cortez, Luis Pacheco-Cobos, Ryan Schacht, Shane J. Macfarlan, Donna Leonetti, Jennifer C. French, Nurul Alam, Fatema Tuz Zohora, Hillard S. Kaplan, Paul L. Hooper, Rebecca Sear

Anthropology Faculty Publications and Presentations

While it is commonly assumed that farmers have higher, and foragers lower, fertility compared to populations practicing other forms of subsistence, robust supportive evidence is lacking. We tested whether subsistence activities—incorporating market integration—are associated with fertility in 10,250 women from 27 small-scale societies and found considerable variation in fertility. This variation did not align with group-level subsistence typologies. Societies labeled as “farmers” did not have higher fertility than others, while “foragers” did not have lower fertility. However, at the individual level, we found strong evidence that fertility was positively associated with farming and moderate evidence of a negative relationship between …


Social Desirability And Relational Self-Esteem In Adults That Experienced Childhood Peer Victimization, Trisha Jeffers Feb 2024

Social Desirability And Relational Self-Esteem In Adults That Experienced Childhood Peer Victimization, Trisha Jeffers

Walden Dissertations and Doctoral Studies

Childhood peer victimization occurs every day in the United States. This experience causes stress, mood changes, and social discord for the victims. Other researchers have examined the long-term implications of childhood peer victimization, which include depression, anxiety, stress response, attention deficits, and poor overall well-being. Further research is needed to identify more areas impacted by childhood peer victimization. Social learning theory proposed experiences influence behaviors and provided the theoretical foundation for this study. Ninety-nine participants were recruited for this quantitative study using online crowdsourcing and social media. The participants completed a survey comprised of the California Bullying Victimization Scale Retrospective …


Cover And Contents Feb 2024

Cover And Contents

Turkish Journal of Biology

No abstract provided.


Theranostic Potential Of A Novel Aptamer Specifically Targeting Her2 In Breast Cancer Cells, Fulya Küçükcankurt, Samet Uçak, Nedret Altiok Feb 2024

Theranostic Potential Of A Novel Aptamer Specifically Targeting Her2 In Breast Cancer Cells, Fulya Küçükcankurt, Samet Uçak, Nedret Altiok

Turkish Journal of Biology

Background/aim: The overexpression of HER2 is correlated with poorer outcomes and therapeutic resistance in breast cancer patients. While HER2-targeted therapies have shown improvement, prognosis remains poor for HER2-positive breast cancer patients, and these treatments have limitations. Therefore, it is crucial to explore effective molecular strategies for early detection and treatment of HER2-positive breast cancers. Materials and methods: In this study, we employed the cell-SELEX method to generate a selective aptamer capable of recognizing HER2 in its native conformation within breast cancer cells, for theranostic applications. Utilizing an adherent cell-SELEX approach, we developed and explored a DNA aptamer, named HMAP7, which …


Therapeutic Inhibition Of Complement Component 3 In Spontaneous Osteoarthritis, Jen Xin Xu Feb 2024

Therapeutic Inhibition Of Complement Component 3 In Spontaneous Osteoarthritis, Jen Xin Xu

MUSC Theses and Dissertations

Osteoarthritis (OA) is a debilitating disease that affects 32.5 million US adults. It is characterized by loss of joint space and cartilage erosion, which eventually causes bone to rub on bone and causes pain and decreased mobility. Not only is it physically detrimental, but it is a financial burden as well. Current treatments of OA are used to control symptoms and leave intense side effects. Despite efforts in the past, there still is no disease-modifying OA drugs (DMOAD) approved on the market yet. The lack of disease-modifying drugs stems from poor understanding of the mechanisms initiating and driving the disease. …


Proteomic Dataset For Decellularization Of Porcine Auricular Cartilage, Roxanne N. Stone, Xinzhu Pu, Julia Thom Oxford Feb 2024

Proteomic Dataset For Decellularization Of Porcine Auricular Cartilage, Roxanne N. Stone, Xinzhu Pu, Julia Thom Oxford

Biology Faculty Publications and Presentations

Objectives Osteoarthritis (OA) is a major concern in the United States and worldwide. Development and validation of robust decellularization techniques is critical in generating suitable bioscaffolds for future OA treatment options.

Data descriptions In the present study, proteins from porcine auricular cartilage before and after decellularization were extracted, digested, and identified using liquid chromatography-tandem mass spectrometry (LC-MS/MS). The data represents protein profiles of both non-decellularized and decellularized porcine auricular cartilage. This data is intended to be useful to scientists who are interesting in generating biomaterials for potential relevant clinical applications using decellularized cartilage tissue.


Method For Electroporation Controlled By Electrical Impedence Measurements, Mark Jeffrey Jaroszeski, Timothy Fawcett, Richard Jason Connolly, Andrew M. Hoff, Reginald Morley Atkins, Douglas Walter Brown, Richard A. Gilbert Feb 2024

Method For Electroporation Controlled By Electrical Impedence Measurements, Mark Jeffrey Jaroszeski, Timothy Fawcett, Richard Jason Connolly, Andrew M. Hoff, Reginald Morley Atkins, Douglas Walter Brown, Richard A. Gilbert

USF Patents

The present invention provides a system and method for measuring an impedance of one or more target cells before and after an electroporation protocol has been applied to the one or more target cells. The result of the impedance measurement provides a feedback control that can be implemented during and/or after the electroporation protocol to customize the electrical treatment for a particular target cell or cellular tissue.


Compositions And Methods For Treating Rsv-Infections, Eleni Markoutsa, Subhra Mohapatra, Shyam Mohapatra Feb 2024

Compositions And Methods For Treating Rsv-Infections, Eleni Markoutsa, Subhra Mohapatra, Shyam Mohapatra

USF Patents

This invention provides for a RSV-targeted nanoparticle PMN (RTPMN), combining HR2D anti-fusion peptide, and plasmid encoded siRNA against RSV-NS1 and/or RSV-P gene as a safe, effective and inexpensive anti-RSV prophylaxis and/or therapy.


Loss Of The Endoplasmic Reticulum Protein Tmem208 Affects Cell Polarity, Development, And Viability, Debdeep Dutta, Oguz Kanca, Rishi V Shridharan, Paul C Marcogliese, Benjamin Steger, Marie Morimoto, F Graeme Frost, Ellen Macnamara, Michael F Wangler, Shinya Yamamoto, Andreas Jenny, David Adams, May C Malicdan, Hugo J Bellen Feb 2024

Loss Of The Endoplasmic Reticulum Protein Tmem208 Affects Cell Polarity, Development, And Viability, Debdeep Dutta, Oguz Kanca, Rishi V Shridharan, Paul C Marcogliese, Benjamin Steger, Marie Morimoto, F Graeme Frost, Ellen Macnamara, Michael F Wangler, Shinya Yamamoto, Andreas Jenny, David Adams, May C Malicdan, Hugo J Bellen

Faculty, Staff and Students Publications

Nascent proteins destined for the cell membrane and the secretory pathway are targeted to the endoplasmic reticulum (ER) either posttranslationally or cotranslationally. The signal-independent pathway, containing the protein TMEM208, is one of three pathways that facilitates the translocation of nascent proteins into the ER. The in vivo function of this protein is ill characterized in multicellular organisms. Here, we generated a CRISPR-induced null allele of the fruit fly ortholog


The Effects Blood Flow Restriction Therapy Augmented With Low-Intensity Exercise On Improving Chronic Pain And Functional Status In Individuals With Rheumatoid Arthritis And Osteoarthritis, Marketa Jones Feb 2024

The Effects Blood Flow Restriction Therapy Augmented With Low-Intensity Exercise On Improving Chronic Pain And Functional Status In Individuals With Rheumatoid Arthritis And Osteoarthritis, Marketa Jones

Doctorate in Kinesiology

Individuals suffering from rheumatoid arthritis (RA) and osteoarthritis (OA) commonly experience chronic pain and functional limitations, which are often accompanied by comorbidities, including depression, fatigue, obesity, and heart disease. While exercise has been identified as an effective, low-cost treatment for these conditions, chronic pain, and limited functionality can pose significant obstacles for those diagnosed with these conditions. Recent research has investigated the potential of blood flow restriction therapy (BFRT) in rehabilitating musculoskeletal injuries and enhancing skeletal muscle properties. The objective of this 6-week study is to examine the potential impact BFRT combined with low-intensity exercise on chronic pain and physical …


Family-Centered Theory Of Change: A Conceptual Framework For Improving Teaching And Learning In Undergraduate Stem Courses, Juan Salinas, Parwinder Grewal, Jose J. Gutierrez, Nicolas A. Pereyra, Dagoberto Ramirez, Elizabeth Salinas, Griselda Salinas, Virginia Santanas, Can Saygin Feb 2024

Family-Centered Theory Of Change: A Conceptual Framework For Improving Teaching And Learning In Undergraduate Stem Courses, Juan Salinas, Parwinder Grewal, Jose J. Gutierrez, Nicolas A. Pereyra, Dagoberto Ramirez, Elizabeth Salinas, Griselda Salinas, Virginia Santanas, Can Saygin

School of Integrative Biological & Chemical Sciences Faculty Publications

Hispanic-Serving Institutions (HSIs) are often characterized as Hispanic enrolling (rather than serving) that practice deficit-based systems that continue to marginalize Latinx and other underrepresented students, especially in STEM fields. Extant research on HSIs stresses the importance of investigating the value of grassroots advocacy groups as external influencers of institutional servingness through deeper engagement with the Latinx community. Using a novel family-centered theory of change that addresses diversity, equity, and inclusion, we integrated intersectionality and servingness into a family-integrated education serving and transforming academic framework. We investigated the potential transformational impact of this framework on students, families, faculty, and administrators at …


Relationship Between On-Demand Telehealth Visits And Emergency Department And Hospital Surge During The Covid-19 Pandemic, B. H. Slovis, Xin Ji, Anna Marie Chang, John C. Kairys, Judd Hollander Feb 2024

Relationship Between On-Demand Telehealth Visits And Emergency Department And Hospital Surge During The Covid-19 Pandemic, B. H. Slovis, Xin Ji, Anna Marie Chang, John C. Kairys, Judd Hollander

Department of Emergency Medicine Faculty Papers

OBJECTIVES: The relationship between COVID-19-related telehealth calls could be used to predict emergency department visits and hospital surges 3 days later potentially facilitating staffing adjustments in advance of patient arrivals. The purpose of this research was to study the temporal association between frequencies of on demand telehealth calls and emergency department surges during the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic.

METHODS: This cohort study examined patients who self-initiated synchronous audio-video on-demand telehealth calls between January 1, 2020 and June 30, 2022, and compared these to emergency department arrivals. The exposure in question was a synchronous audio-video on-demand telehealth …


A Test Of The Gleaner–Opportunist Trade-Off Among Photosynthetic Traits In Cryptophyte Algae, Jake A. Swanson, Matthew J. Greenwold, Tammi L. Richardson, Jeffry L. Dudycha Feb 2024

A Test Of The Gleaner–Opportunist Trade-Off Among Photosynthetic Traits In Cryptophyte Algae, Jake A. Swanson, Matthew J. Greenwold, Tammi L. Richardson, Jeffry L. Dudycha

Biology Faculty Publications and Presentations

As photosynthetic producers, phytoplankton form the foundation of aquaticfood webs. Understanding the relationships among photosynthetic traits inphytoplankton is essential to revealing how diversification of these traitsallows phytoplankton to harvest energy from different light environments. Weinvestigated whether the diversification of 15 species of cryptophytes, a phy-lum of phytoplankton with diverse light-capturing pigments, showed evidenceof trade-offs among photosynthetic performance traits as predicted by the gleaner-opportunist resource exploitation framework. We constructed photo-synthesis versus irradiance (P–E) curves and rapid light curves (RLCs) to estimate parameters characterizing photosynthetic performance and electrontransport rate. We inferred the evolutionary relationships among the 15 specieswith ultraconserved genomic elements and …


New Features Of Laboratory-Generated Epfrs From 1,2-Dichlorobenzene (Dcb) And 2-Monochlorophenol (Mcp), Lavrent Khachatryan, Marwan Y. Rezk, Divine Nde, Farhana Hasan, Slawomir Lomnicki, Dorin Boldor, Robert Cook, Phillip Sprunger, Randall Hall, Stephania Cormier Feb 2024

New Features Of Laboratory-Generated Epfrs From 1,2-Dichlorobenzene (Dcb) And 2-Monochlorophenol (Mcp), Lavrent Khachatryan, Marwan Y. Rezk, Divine Nde, Farhana Hasan, Slawomir Lomnicki, Dorin Boldor, Robert Cook, Phillip Sprunger, Randall Hall, Stephania Cormier

Faculty Publications

The present research is primarily focused on investigating the characteristics of environmentally persistent free radicals (EPFRs) generated from commonly recognized aromatic precursors, namely, 1,2-dichlorobenzene (DCB) and 2-monochlorophenol (MCP), within controlled laboratory conditions at a temperature of 230 °C, termed as DCB230 and MCP230 EPFRs, respectively. An intriguing observation has emerged during the creation of EPFRs from MCP and DCB utilizing a catalyst 5% CuO/SiO2, which was prepared through various methods. A previously proposed mechanism, advanced by Dellinger and colleagues (a conventional model), postulated a positive correlation between the degree of hydroxylation on the catalyst’s surface (higher hydroxylated, HH and less …


Healing And Connectedness At Akhiok Kids Camp, Speridon Simeonoff Sr., Judy Simeonoff, Teacon Simeonoff, Speridon Simeonoff Jr., Sven Haakanson Jr., Cheri Simeonoff, Balika Haakanson, Leilani Sabzalian Feb 2024

Healing And Connectedness At Akhiok Kids Camp, Speridon Simeonoff Sr., Judy Simeonoff, Teacon Simeonoff, Speridon Simeonoff Jr., Sven Haakanson Jr., Cheri Simeonoff, Balika Haakanson, Leilani Sabzalian

The Rural Educator

Each August, Sugpiaq Elders, community members, and educators gather in Cape Alitak to host Akhiok Kids Camp, a week-long culture camp that provides a space for local Sugpiaq youth to learn and carry forward traditional lifeways and promotes youth’s self-esteem, identity, and healthy choices. This article traces the legacy of the camp and outlines its ongoing vision and curriculum, including the Indigenous values and principles of education that guide camp activities. Of particular focus is the role of camp in fostering Sugpiaq youth’s sense of connectedness to their homelands, waters, community, and culture, a focus that promotes healing, cultural resurgence, …


H2a.Z Histone Variants Facilitate Hdaci-Dependent Removal Of H3.3k27m Mutant Protein In Pediatric High-Grade Glioma Cells, Katarzyna B Leszczynska, Francisca N L Vitorino, Benjamin A Garcia, Et Al. Feb 2024

H2a.Z Histone Variants Facilitate Hdaci-Dependent Removal Of H3.3k27m Mutant Protein In Pediatric High-Grade Glioma Cells, Katarzyna B Leszczynska, Francisca N L Vitorino, Benjamin A Garcia, Et Al.

2020-Current year OA Pubs

Diffuse intrinsic pontine gliomas (DIPGs) are deadly pediatric brain tumors, non-resectable due to brainstem localization and diffusive growth. Over 80% of DIPGs harbor a mutation in histone 3 (H3.3 or H3.1) resulting in a lysine-to-methionine substitution (H3K27M). Patients with DIPG have a dismal prognosis with no effective therapy. We show that histone deacetylase (HDAC) inhibitors lead to a significant reduction in the H3.3K27M protein (up to 80%) in multiple glioma cell lines. We discover that the SB939-mediated H3.3K27M loss is partially blocked by a lysosomal inhibitor, chloroquine. The H3.3K27M loss is facilitated by co-occurrence of H2A.Z, as evidenced by the …


Bridging Therapy With Axicabtagene Ciloleucel For Large B-Cell Lymphoma: Results From The Us Lymphoma Car-T Consortium, Michael D Jain, Miriam T Jacobs, Feng Gao, Armin Ghobadi, Et Al. Feb 2024

Bridging Therapy With Axicabtagene Ciloleucel For Large B-Cell Lymphoma: Results From The Us Lymphoma Car-T Consortium, Michael D Jain, Miriam T Jacobs, Feng Gao, Armin Ghobadi, Et Al.

2020-Current year OA Pubs

During the manufacturing period of autologous chimeric antigen receptor (CAR) T-cell therapy, patients may experience a decline in their condition due to cancer progression. In this study, we investigated the impact of bridging therapy (BT) on the outcome of patients with relapsed/refractory large B-cell lymphoma who received antilymphoma treatment between leukapheresis and axicabtagene ciloleucel (axi-cel) infusion. We conducted our analysis using data from the multicenter US Lymphoma CAR-T Consortium, with a median follow-up of 33 months (range, 4.3-42.1). Out of the 298 patients who underwent leukapheresis, 275 patients received axi-cel. A total 52% of patients (n = 143) who received …


A Global Database Of Dissolved Organic Matter (Dom) Concentration Measurements In Coastal Waters (Coastdom V1), Christian Lønborg, Cátia Carreira, Gwenaël Abril, Susana Agustí, Valentina Amaral, Agneta Andersson, Javier Arístegui, Punyasloke Bhadury, Mariana B. Bif, Alberto V. Borges, Steven Bouillon, Maria L. I. Calleja, Luiz C. Cotovicz, Stefano Cozzi, Maryló Doval, Carlos M. Duarte, Bradley Eyre, Cédric G. Fichot, E. Elena García-Martín, Alexandra Garzon-Garcia, Michele Giani, Rafael Gonçalves-Araujo, Renee Gruber, Dennis A. Hansell, Fuminori Hashihama, Ding He, Johnna M. Holding, William R. Hunter, J. Severino P. Ibánhez, Valeria Ibello, Shan Jiang, Guebuem Kim, Katja Klun, Piotr Kowalczuk, Atsushi Kubo, Choon-Weng Lee, Cláudia B. Lopes, Federica Maggioni, Paolo Magni, Celia Marrase, Patrick Martin, S. Leigh Mccallister, Roisin Mccallum, Patricia M. Medeiros, Xosé A. G. Morán, Frank E. Muller-Karger, Allison Myers-Pigg, Marit Norli, Joanne M. Oakes, Helena Osterholz, Hyekyung Park, Maria L. Paulsen, Judith A. Rosentreter, Jeff D. Ross, Digna Rueda-Roa, Chiara Santinelli, Yuan Shen, Eva Teira, Tinkara Tinta, Guenther Uher, Masahide Wakita, Nicholas Ward, Kenta Watanabe, Yu Xin, Youhei Yamashita, Liyang Yang, Jacob Yeo, Huamao Yuan, Qiang Zheng, Xosé A. Álvarez-Salgado Feb 2024

A Global Database Of Dissolved Organic Matter (Dom) Concentration Measurements In Coastal Waters (Coastdom V1), Christian Lønborg, Cátia Carreira, Gwenaël Abril, Susana Agustí, Valentina Amaral, Agneta Andersson, Javier Arístegui, Punyasloke Bhadury, Mariana B. Bif, Alberto V. Borges, Steven Bouillon, Maria L. I. Calleja, Luiz C. Cotovicz, Stefano Cozzi, Maryló Doval, Carlos M. Duarte, Bradley Eyre, Cédric G. Fichot, E. Elena García-Martín, Alexandra Garzon-Garcia, Michele Giani, Rafael Gonçalves-Araujo, Renee Gruber, Dennis A. Hansell, Fuminori Hashihama, Ding He, Johnna M. Holding, William R. Hunter, J. Severino P. Ibánhez, Valeria Ibello, Shan Jiang, Guebuem Kim, Katja Klun, Piotr Kowalczuk, Atsushi Kubo, Choon-Weng Lee, Cláudia B. Lopes, Federica Maggioni, Paolo Magni, Celia Marrase, Patrick Martin, S. Leigh Mccallister, Roisin Mccallum, Patricia M. Medeiros, Xosé A. G. Morán, Frank E. Muller-Karger, Allison Myers-Pigg, Marit Norli, Joanne M. Oakes, Helena Osterholz, Hyekyung Park, Maria L. Paulsen, Judith A. Rosentreter, Jeff D. Ross, Digna Rueda-Roa, Chiara Santinelli, Yuan Shen, Eva Teira, Tinkara Tinta, Guenther Uher, Masahide Wakita, Nicholas Ward, Kenta Watanabe, Yu Xin, Youhei Yamashita, Liyang Yang, Jacob Yeo, Huamao Yuan, Qiang Zheng, Xosé A. Álvarez-Salgado

Research outputs 2022 to 2026

Measurements of dissolved organic carbon (DOC), nitrogen (DON), and phosphorus (DOP) concentrations are used to characterize the dissolved organic matter (DOM) pool and are important components of biogeochemical cycling in the coastal ocean. Here, we present the first edition of a global database (CoastDOM v1; available at 10.1594/PANGAEA.964012, Lonborg et al., 2023) compiling previously published and unpublished measurements of DOC, DON, and DOP in coastal waters. These data are complemented by hydrographic data such as temperature and salinity and, to the extent possible, other biogeochemical variables (e.g. chlorophyll a, inorganic nutrients) and the inorganic carbon system (e.g. dissolved inorganic carbon …


Tnfr1 Signaling Is Positively Regulated By Jak-2 And C-Src Via Tyrosine Phosphorylation, Fatma Zehra Hapi̇l Zevkli̇ler, Fatma Ece Çopuroğlu, Mustafa Gökhan Ertosun, Ufuk Mert, Derya Özeş, Osman Nidai Özeş Feb 2024

Tnfr1 Signaling Is Positively Regulated By Jak-2 And C-Src Via Tyrosine Phosphorylation, Fatma Zehra Hapi̇l Zevkli̇ler, Fatma Ece Çopuroğlu, Mustafa Gökhan Ertosun, Ufuk Mert, Derya Özeş, Osman Nidai Özeş

Turkish Journal of Biology

Background/aim: Tumor necrosis factor alpha (TNFα, a.k.a. TNF) is a pleiotropic cytokine that exerts most of its effects through type 1 TNF receptor (TNFR1). Following TNF binding, TNFR1 recruits TRADD (tumor necrosis factor receptor type 1-associated DEATH domain). This interaction triggers formation of signalosome complexes which have been claimed to induce apoptosis (via downstream caspase activations), inflammation (via NF-kappaB) and stress pathways (JNK & p38). However, the mechanism underlying TNF-induced ERK and AKT activation is not completely revealed. TNFR1 is known to constitutively bind c-Src and JAK2, and these enzymes were previously demonstrated to modulate TNF signaling. Therefore, we hypothesized …


Prognostic Gene Biomarkers For C-Src Inhibitor Si162 Sensitivity In Melanoma Cells, Seyhan Türk, Ayşegül Yilmaz, Ümit Yavuz Malkan, Gülberk Uçar, Can Türk Feb 2024

Prognostic Gene Biomarkers For C-Src Inhibitor Si162 Sensitivity In Melanoma Cells, Seyhan Türk, Ayşegül Yilmaz, Ümit Yavuz Malkan, Gülberk Uçar, Can Türk

Turkish Journal of Biology

Background/aim: Early detection and treatment are crucial in combating malignant melanoma. Src is an important therapeutic target in melanoma due to its association with cancer progression. However, developing effective Src-targeting drugs remains challenging and personalized medicine relies on biomarkers and targeted therapies for precise and effective treatment. This study focuses on Si162, a newly synthesized c-Src inhibitor, to identify reliable biomarkers for predicting Si162 sensitivity and explore associated biological characteristics and pathways in melanoma cells. Materials and methods: Primary melanoma cells (M1, M21, M24, M84, M133, M307, and M2025) were obtained from patients diagnosed with melanoma. Si162 cytotoxicity tests were …


Expression Patterns Of M6a Rna Methylation Regulators Under Apoptotic Conditions In Various Human Cancer Cell Lines, Azime Akçaöz Alasar, Buket Sağlam, İpek Erdoğan Vatansever, Bünyamin Akgül Feb 2024

Expression Patterns Of M6a Rna Methylation Regulators Under Apoptotic Conditions In Various Human Cancer Cell Lines, Azime Akçaöz Alasar, Buket Sağlam, İpek Erdoğan Vatansever, Bünyamin Akgül

Turkish Journal of Biology

Background/aim: Cancer is a complex disease that involves both genetic and epigenetic factors. While emerging evidence clearly suggests that changes in epitranscriptomics play a crucial role in cancer pathogenesis, a comprehensive understanding of the writers, erasers, and readers of epitranscriptomic processes, particularly under apoptotic conditions remains lacking. The aim of this study was to uncover the changes in the expression of m6A RNA modifiers under apoptotic conditions across various cancer cell lines. Materials and methods: Initially, we quantified the abundance of m6A RNA modifiers in cervix (HeLa and ME180), breast (MCF7 and MDA-MB-231), lung (A549 and H1299), and colon (CaCo2 …


Circrna Ldlr Promotes Proliferation And Aerobic Glycolysis Of Gastric Cancer Cells By Targeting Chd1 With Mir-449b-5p, Fanye Zeng, Juntao Zhao, Mengting Tong, Wenting He, Nan Li, Yuxiang Fan, Yanhua Zhu, Liping Zhang, Hongliang Zhang Feb 2024

Circrna Ldlr Promotes Proliferation And Aerobic Glycolysis Of Gastric Cancer Cells By Targeting Chd1 With Mir-449b-5p, Fanye Zeng, Juntao Zhao, Mengting Tong, Wenting He, Nan Li, Yuxiang Fan, Yanhua Zhu, Liping Zhang, Hongliang Zhang

Turkish Journal of Biology

Background/aim: Circular RNAs can serve as detection biomarkers and therapeutic targets for tumors. Our study aimed to elucidate the mechanisms associated with circRNA LDLR (circLDLR) in gastric cancer (GC) proliferation and aerobic glycolysis. Materials and methods: Expression signatures of circLDLR, miR-449b-5p, and CHD1 were examined in GC samples using quantitative PCR. Proliferation ability of MKN-45 cells was assessed via CCK-8 and EdU assays, and cell apoptosis was measured by flow cytometry. Glucose uptake, lactate production, ATP/ADP ratios, and NAD+/NADH ratios in cell supernatants were quantified to evaluate aerobic glycolysis. Subcellular isolation assay, quantitative PCR, immunoblot analysis, RNA immunoprecipitation (RIP), and …


Beneficial Effects Of A Novel Polyherbal Formulation On The Skeletal Muscle Antioxidant Status, Inflammation, And Muscle-Signaling Proteins In Exercised Rats, Mehmet Tuzcu, Oğuzhan Özdemi̇r, Cemal Orhan, Nurhan Şahi̇n, Abhijeet Morde, Muralidhara Padigaru, Prakash Bhanuse, Kazım Şahi̇n Feb 2024

Beneficial Effects Of A Novel Polyherbal Formulation On The Skeletal Muscle Antioxidant Status, Inflammation, And Muscle-Signaling Proteins In Exercised Rats, Mehmet Tuzcu, Oğuzhan Özdemi̇r, Cemal Orhan, Nurhan Şahi̇n, Abhijeet Morde, Muralidhara Padigaru, Prakash Bhanuse, Kazım Şahi̇n

Turkish Journal of Biology

Background/aim: Exhausting exercise can damage muscle tissue due to free radical interactions. It is hypothesized that the increase in free radicals following muscle injury, either due to oxidative damage to biomolecules or the activation of inflammatory cytokines, may lead to secondary muscle damage. This study investigated the effects of a novel joint health formula (JHF) containing bisdemethoxycurcumin-enriched curcumin, 3-O-Acetyl-11-keto-beta-boswellic acid-enriched Boswellia (AKBA), and Ashwagandha on exhaustion time, grip strength, antioxidant status, and muscle-signaling proteins in exhaustively exercised rats. Materials and methods: Twenty-eight rats were divided into four groups: Control (C), exercise (E), E + JHF 100 (100 mg/kg), and E …


Effect Of Thymol On Oxidative Stress And Reelin Signaling Pathway In Alzheimer's Disease Model, Barış Bi̇tmez, Burcu Çevreli̇, Emel Kaşikçi Feb 2024

Effect Of Thymol On Oxidative Stress And Reelin Signaling Pathway In Alzheimer's Disease Model, Barış Bi̇tmez, Burcu Çevreli̇, Emel Kaşikçi

Turkish Journal of Biology

Background/aim: The purpose of this study was to investigate how thymol affects cognitive functions and the levels of MDA, GSH, Aβ1-42, ApoE, reelin, and LRP8 in an AD model induced in male Wistar albino rats with the application of D-galactose (D-gal) and aluminum chloride (AlCl3). Materials and methods: In this work, 3-month-old male Wistar albino rats were used. Group 1 served as the Control, Group 2 received 0.5 mL/day saline + 0.5 mL/day sunflower oil, Group 3 was administered 200 mg/kg/day AlCl3 + 60 mg/kg/day D-gal, Group 4 received 30 mg/kg/day thymol, and Group 5 was administered 200 mg/kg/day AlCl3 …


Divergent Proteomic Profiles Of Opium Poppy Cultivars, Setenay Aykanat, Mine Türktaş Feb 2024

Divergent Proteomic Profiles Of Opium Poppy Cultivars, Setenay Aykanat, Mine Türktaş

Turkish Journal of Biology

We examined the proteomic profiles of three registered opium poppy cultivars (Papaver somniferum L.) having different alkaloid contents. The study was conducted on both the stem and capsule organs. A high number of differentially expressed proteins (DEPs) were identified between the cultivars and the organs. We analyzed DEPs for their contribution in GO terms and KEGG pathways. The up-regulated DEPs were significantly enriched in photosynthesis and translation, for morphine-rich and noscapine-rich cultivars, respectively. The data depicted that photosynthesis is crucial for Benzylisoquinoline alkaloid (BIA) biosynthesis, but different processes are also effective on morphine and noscapine biosynthesis, which occur at different …


Self-Managment And Breastfeeding In Women With Preexisting Type 2 Diabetes Mellitus From Thailand, Ratchanok Phonyiam Feb 2024

Self-Managment And Breastfeeding In Women With Preexisting Type 2 Diabetes Mellitus From Thailand, Ratchanok Phonyiam

Dissertations

The prevalence of type 2 diabetes mellitus (T2DM) is rising at a younger age, leading to an increased number of pregnant women with preexisting T2DM. Although traditional beliefs and practices influence diabetes management and breastfeeding, recommendations integrating Thai cultural beliefs in maternal care are lacking. The purpose of this dissertation is to describe diabetes self-management in pregnancy and breastfeeding experiences in women with preexisting T2DM from Thailand. This dissertation is a convergent parallel mixed-methods study, guided by the National Institute on Minority Health and Health Disparities (NIMHD) Framework. Data were collected two times. The first time was during pregnancy (T1). …


Gamma Delta T Cells In Acute Myeloid Leukemia: Biology And Emerging Therapeutic Strategies, Adishwar Rao, Akriti Agrawal, Gautam Borthakur, Venkata Lokesh Battula, Abhishek Maiti Feb 2024

Gamma Delta T Cells In Acute Myeloid Leukemia: Biology And Emerging Therapeutic Strategies, Adishwar Rao, Akriti Agrawal, Gautam Borthakur, Venkata Lokesh Battula, Abhishek Maiti

Faculty, Staff and Student Publications

γδ T cells play an important role in disease control in acute myeloid leukemia (AML) and have become an emerging area of therapeutic interest. These cells represent a minor population of T lymphocytes with intrinsic abilities to recognize antigens in a major histocompatibility complex-independent manner and functionally straddle the innate and adaptive immunity interface. AML shows high expression of phosphoantigens and UL-16 binding proteins that activate the Vδ2 and Vδ1 subtypes of γδ T cells, respectively, leading to γδ T cell-mediated cytotoxicity. Insights from murine models and clinical data in humans show improved overall survival, leukemia-free survival, reduced risk of …


Dynamics Of Nanocluster Aerosol In The Indoor Atmosphere During Gas Cooking, Satya S. Patra, Jinglin Jiang, Xiaosu Ding, Chunxu Huang, Emily K. Reidy, Vinay Kumar, Paige Price, Connor Keech, Gerhard Steiner, Philip Stevens, Nusrat Jung, Brandon E. Boor Feb 2024

Dynamics Of Nanocluster Aerosol In The Indoor Atmosphere During Gas Cooking, Satya S. Patra, Jinglin Jiang, Xiaosu Ding, Chunxu Huang, Emily K. Reidy, Vinay Kumar, Paige Price, Connor Keech, Gerhard Steiner, Philip Stevens, Nusrat Jung, Brandon E. Boor

Purdue University Libraries Open Access Publishing Fund

Nanocluster aerosol (NCA: particles in the size range of 1–3 nm) are a critically important, yet understudied, class of atmospheric aerosol particles. NCA efficiently deposit in the human respiratory system and can translocate to vital organs. Due to their high surface area-to-mass ratios, NCA are associated with a heightened propensity for bioactivity and toxicity. Despite the human health relevance of NCA, little is known regarding the prevalence of NCA in indoor environments where people spend the majority of their time. In this study, we quantify the formation and transformation of indoor atmospheric NCA down to 1 nm via high-resolution online …