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Gemcitabine In Combination With Epibrassinolide Enhanced The Apoptotic Response In An Er Stress-Dependent Manner And Reduced The Epithelial-Mesenchymal Transition In Pancreatic Cancer Cells, Pinar Obakan Yerli̇kaya, Leila Mehdizadehtapeh, Özge Rencüzoğullari, Fadina Kuryayeva, Sena Sedef Çevi̇kli̇, Şevval Özağar, Si̇bel Pinar Odabaş, Sude Tunçkol, Hakan Yeti̇m, Ajda Çoker Gürkan, Eli̇f Damla Arisan Jan 2022

Gemcitabine In Combination With Epibrassinolide Enhanced The Apoptotic Response In An Er Stress-Dependent Manner And Reduced The Epithelial-Mesenchymal Transition In Pancreatic Cancer Cells, Pinar Obakan Yerli̇kaya, Leila Mehdizadehtapeh, Özge Rencüzoğullari, Fadina Kuryayeva, Sena Sedef Çevi̇kli̇, Şevval Özağar, Si̇bel Pinar Odabaş, Sude Tunçkol, Hakan Yeti̇m, Ajda Çoker Gürkan, Eli̇f Damla Arisan

Turkish Journal of Biology

Gemcitabine is a broad-spectrum antimetabolite and a deoxycytidine analog recognized as a standard therapy alone or in combination with other antineoplastic agents in the therapy of pancreas cancer. Drug resistance following gemcitabine treatment is a common phenomenon; therefore, combinational therapy models are usually preferred. Pancreatic ductal adenocarcinoma, or pancreas cancer, is the fourth leading cause of cancer-related deaths worldwide. With the increasing incidence of pancreatic cancer every year, the mortality rate is also rising significantly because of late diagnosis, and limited chemotherapy options. Adjuvant chemotherapy after surgical resection is the typical option for the treatment of early pancreatic cancer. Mostly, …


Cover And Contents Jan 2022

Cover And Contents

Turkish Journal of Biology

No abstract provided.


Investigation Of Boron Nanosized Particles Prepared With Various Surfactants And Chitosan In Terms Of Physical Stability And Cell Viability, Emrah Özakar, Mehmet Semi̇h Bi̇ngöl, Ruki̇ye Sevi̇nç Özakar Jan 2022

Investigation Of Boron Nanosized Particles Prepared With Various Surfactants And Chitosan In Terms Of Physical Stability And Cell Viability, Emrah Özakar, Mehmet Semi̇h Bi̇ngöl, Ruki̇ye Sevi̇nç Özakar

Turkish Journal of Chemistry

Nanosuspensions (NS) are one of the new generation drug carrier forms developed to overcome the deficiencies of drugs with poor water solubility or insolubility and are considered to be one of the most successful approaches to formulate compounds in recent years. Boron nitride (BN) is insoluble in water and chemically more stable than carbon, it offers better biological superiority although the application of carbon structures in the biomedical field has increased in recent years. Chitosan is a polymer with excellent processability and biocompatibility thanks to its high dielectric constant. In addition, chitosan has a high affinity for metal ions. This …


Synthesis And Antioxidant Activities Of Benzylic Bromophenols Inclusive Of Natural Products, Çeti̇n Bayrak, Eda Mehtap Üç, Mohsen Rezaei, İlhami̇ Gülçi̇n, Abdullah Menzek Jan 2022

Synthesis And Antioxidant Activities Of Benzylic Bromophenols Inclusive Of Natural Products, Çeti̇n Bayrak, Eda Mehtap Üç, Mohsen Rezaei, İlhami̇ Gülçi̇n, Abdullah Menzek

Turkish Journal of Chemistry

The synthesis of natural products 2-(2,3-dibromo-4,5-dihydroxyphenyl)acetic acid (1) and 2-(2,6-dibromo-3,5-dihydroxyphenyl)acetic acid (2) and as well as their derivatives 25 and 26 were carried out by substitution, hydrolysis and demethylation reactions of the corresponding four benzyl bromides. The antioxidant potentials of benzylic acid-derived bromophenols were, for the first time, appraised by several outstanding bioanalytical methods. Besides these, we estimated the antioxidant effects which were studied using the methods of DPPH·, ABTS·+ scavenging activities, ferric (Fe3+) and cupric (Cu2+) ions and Fe3+-TPTZ reducing capacities. Benzylic acid-derived bromophenols were found as effective DPPH·, and …


Synthesis Of Titanium Dioxide Nanoparticles With Renewable Resources And Their Applications: Review, Umut Şafak Öztürk, Ali̇me Çitak Jan 2022

Synthesis Of Titanium Dioxide Nanoparticles With Renewable Resources And Their Applications: Review, Umut Şafak Öztürk, Ali̇me Çitak

Turkish Journal of Chemistry

Metal-oxide nanoparticles have reached a wide range of applications in the last ten years. Titanium dioxide nanoparticles stand out with their unique crystal structure and near-perfect physical and chemical properties at nanoscales (crystal size between 10-100 nm). It has created many applications with its white pigment, semiconductor state, and effective photocatalytic properties, but the synthesis of these nanoparticles is very damaging to nature. Titanium dioxide nanoparticles, which can be synthesized with toxic solvents or high-energy machines, have started to be synthesized by the green synthesis method, which has been a cheap and easy method in recent years. The application areas …


Homonuclear Nickel(Ii) Metal-Organic Framework-Type Supramolecule: Adsorption And Emission Properties, Idongesit Mbonu, Olusegun Abiola, Hamzah Bawa Jan 2022

Homonuclear Nickel(Ii) Metal-Organic Framework-Type Supramolecule: Adsorption And Emission Properties, Idongesit Mbonu, Olusegun Abiola, Hamzah Bawa

Turkish Journal of Chemistry

Coordination-driven self-assembly of nickel (II) ions with equimolar amounts of 1, 10 phenanthroline, and benzoic acid was used to create homonuclear nickel (II) MOF-type supramolecule. Single crystal X-ray diffraction, scanning electron microscopy, differential scanning calorimetry, photoluminescence measurement, FT-IR, UV-visible spectroscopy, and nitrogen physisorption measurement were used to characterize the compound. The single crystal X-ray diffraction study reveals that the synthesized compound is two-dimensional with pores in the structure. The homonuclear nickel (II) MOF-type supramolecule crystallized in a triclinic crystal system, with space group P-1 (No.2) and unit cell parameters a = 9.2053(4) Ǻ, b = 13.2964(5) Ǻ, c = 15.8998(6) …


The 4-(Dimethylaminoalkyl)Piperazine Inhibitors Of Α-Glucosidase: Allosteric Enzyme Inhibition And Identification Of Interacting Chemical Groups, Usman Ghani, Sajda Ashraf, Zaheer Ul Haq, Zafer Asim Kaplancikli, Fati̇h Demi̇rci̇, Yusuf Özkay, Sibtain Afzal Jan 2022

The 4-(Dimethylaminoalkyl)Piperazine Inhibitors Of Α-Glucosidase: Allosteric Enzyme Inhibition And Identification Of Interacting Chemical Groups, Usman Ghani, Sajda Ashraf, Zaheer Ul Haq, Zafer Asim Kaplancikli, Fati̇h Demi̇rci̇, Yusuf Özkay, Sibtain Afzal

Turkish Journal of Chemistry

In continuation of our interest in identifying new α-glucosidase inhibitors with potential to become antidiabetic drugs, this work focuses on the study of 4-(dimethylaminoalkyl)piperazine-1-carbodithioate derivatives as α-glucosidase inhibitors. The eight heterocyclic piperazine-dithiocarbamate complexes studied in this work contain a variety of substitutions on their benzene ring exhibiting potent, noncompetitive inhibition of α-glucosidase. Dithiocarbamate and piperazine moieties are important pharmacophores with promising therapeutic prospects featuring facilitated drug delivery due to their lipophilic nature in addition to their α-glucosidase inhibitory activity. Enzyme kinetics, molecular dynamics simulations, and docking studies revealed that the target compounds bind to a new allosteric site that is …


A Study Of Silicon And Germanium-Based Molecules In Terms Of Solar Cell Devices Performance, Emi̇ne Taniş Jan 2022

A Study Of Silicon And Germanium-Based Molecules In Terms Of Solar Cell Devices Performance, Emi̇ne Taniş

Turkish Journal of Chemistry

Photovoltaic energy sources are increasingly in demand due to the cost of petroleum fuels and concerns about carbon emissions. For this reason, it is important to determine the photovoltaic properties of the compounds that are thought to be suitable for these energy sources. Here, 1,1,2,3,4,5-Hexaphenyl-1H-silole (HPS) and 1,1,2,3,4,5-Hexaphenyl-1H-germole (HPG) compounds that are thought to have excellent photovoltaic properties, electronic and charge transport properties were investigated experimentally and theoretically. The total energies, absorption spectra, Fermi energy (Efl) and work function (φ), maximum open circuit voltage (VOC), reorganization energies (λe and λh), frontier molecular orbital …


L-(+)-Tryptophan Methyl Ester Derived Polymeric Microbeads As An Efficient Heterogeneous Catalyst For Green Synthesis Of 2-Amino-4-(Nitromethyl)-4h-Chromene-3- Carbonitriles, Ayşe Haliç Poslu, Bi̇lgen Osman, Yunus Kaya, Ömer Koz, Gamze Koz Jan 2022

L-(+)-Tryptophan Methyl Ester Derived Polymeric Microbeads As An Efficient Heterogeneous Catalyst For Green Synthesis Of 2-Amino-4-(Nitromethyl)-4h-Chromene-3- Carbonitriles, Ayşe Haliç Poslu, Bi̇lgen Osman, Yunus Kaya, Ömer Koz, Gamze Koz

Turkish Journal of Chemistry

The cross-linked microbeads with average diameter of 106-300 μm, [poly(EGDMA-MATrp)], were obtained by copolymerization reaction of N-methacryloyl-L-(+)-tryptophan methyl ester (MATrp) with ethylene glycol dimethacrylate (EGDMA) and successfully applied as a heterogeneous catalyst in conjugate addition reaction of nitromethane to substituted 2-iminochromenes in aqueous media. A variety of 2-amino-4-(nitromethyl)-4H-chromene-3-carbonitriles has been synthesized in good yields. Polymeric microbeads were very durable and reused 5 times without a significant loss of activity. DFT calculations and experimental results revealed the significant role of π-π interactions as well as hydrogen bonding in the reaction mechanism.


Ytterbium Oxide Nanofibers: Fabrication And Characterization For Energy Applications, Adem Sarilmaz Jan 2022

Ytterbium Oxide Nanofibers: Fabrication And Characterization For Energy Applications, Adem Sarilmaz

Turkish Journal of Chemistry

Metal oxide nanomaterials are widely used in many applications of renewable energy. Ytterbium oxide (Yb2O3) also attracts attention due to its similar structure to ZnO (~3,26 eV) and TiO2 (~3,36 eV) in terms of bandgap energy. In this study, Yb2O3 belonging to the lanthanide oxide family was produced as nanofiber forms by using the electrospinning technique, which allows for large-scale production, for the first time. The morphological, structural, optical, and phase properties of the produced nanofibers were investigated via XRD, SEM-Mapping, TEM, FTIR, UV-Vis, and XPS characterization techniques. As a result of …


Release Of Nifedipine, Furosemide, And Niclosamide Drugs From The Biocompatible Poly(Hema) Hydrogel Structures, Bahar Yilmaz Jan 2022

Release Of Nifedipine, Furosemide, And Niclosamide Drugs From The Biocompatible Poly(Hema) Hydrogel Structures, Bahar Yilmaz

Turkish Journal of Chemistry

The primary aim of this article was to improve the solubility and bioavailability of the drugs nifedipine, niclosamide, and furosemide due to their poor solubility and dissolution rate. Therefore, these drugs require improvement in solubility and dissolution rate in formulation development, especially in solid dosage forms such as hydrogels and capsules. Hydrogel structures were synthesized by using a biocompatible, nontoxic, and protective pure 2-hydroxy ethyl methacrylate (HEMA) monomer. These hydrogel structures were characterized by various techniques such as scanning electron microscopy and Fourier-transformed infrared spectroscopy. In the next step, drug molecules were loaded in the poly (HEMA) hydrogels. Drug releases …


Cover And Contents Jan 2022

Cover And Contents

Turkish Journal of Chemistry

No abstract provided.


Assessment Of Environmental Pollutants At Trace Levels Using Ionic Liquids-Based Liquid-Phase Microextraction, Furkan Uzcan, Muhammad Saqaf Jagirani, Mustafa Soylak Jan 2022

Assessment Of Environmental Pollutants At Trace Levels Using Ionic Liquids-Based Liquid-Phase Microextraction, Furkan Uzcan, Muhammad Saqaf Jagirani, Mustafa Soylak

Turkish Journal of Chemistry

Sample preparation is the crucial and most challenging part of analytical chemistry for the speciation of environmental pollutants' traces. Along with the development of the sample preparation methods, the ionic liquid-based microextraction technique plays an important role. Due to the unequivocally unique "green" characteristic of ionic liquids (ILs), they owe their tunable properties, such as highly selective and high reaction efficiency, reusability, and good thermal stability, to present advancements in the sample preparation process. The ionic liquid-based microextraction techniques miniaturize the sample preparation process. Liquid phase microextraction intermediate solvents, desorption solvent extractants, and mediators have been used. They are quoting …


Chemical Compositions And Biological Activities Of The Oils From The Genus Taxus And Factors Limiting The Regeneration Of Endangered Yews: A Review, Sagar Dhakal, Prem Kumar Khosla, Tokuma Getahun Jan 2022

Chemical Compositions And Biological Activities Of The Oils From The Genus Taxus And Factors Limiting The Regeneration Of Endangered Yews: A Review, Sagar Dhakal, Prem Kumar Khosla, Tokuma Getahun

Turkish Journal of Chemistry

The genus Taxus (yews) is the largest genus of the family Taxaceae. It comprises about 24 species with 55 varieties distributed mainly in Asia, Europe, North Africa, and North America. In addition to the taxane diterpenoids and the cancer drug taxol, its species contain many essential oils with actual or potential biological activity. This review covers the chemical constituents as well as biological activities of these oils that have been studied in fourteen countries over 46 years (1975-2021). It also discusses the biotic and abiotic factors that limit the regeneration of these economically and medicinally important plants.


Virus Detection Using Bio-Based Analysis Systems: A Review Of Biorecognition Strategies, Nur Meli̇s Kiliç, Di̇lek Odaci Demi̇rkol Jan 2022

Virus Detection Using Bio-Based Analysis Systems: A Review Of Biorecognition Strategies, Nur Meli̇s Kiliç, Di̇lek Odaci Demi̇rkol

Turkish Journal of Chemistry

Infectious illnesses are on the rise in today's world, with serious consequences for animals, plants, and humans. Several infections, including the human immunodeficiency virus, affect a large number of individuals in various countries, particularly in the poorer portions of contemporary society, and continue to cause a variety of health problems. Viruses are tiny parasitic organisms. They are infectious agents that can only reproduce within a live cell of an organism. Viruses may infect any living organism. For clinical pointof- care applications, early detections for harmful agents such as bacteria, viruses are critical. The possibility of worldwide epidemics as a result …


Silver Nanoparticles (Agnps) Based Selective Colorimetric Sensor For The Detection Of D-Arabinitol In A Urine Sample, Yuni Retnaningtyas, Siswandono Siswodihardjo, Ari Satia Nugraha Jan 2022

Silver Nanoparticles (Agnps) Based Selective Colorimetric Sensor For The Detection Of D-Arabinitol In A Urine Sample, Yuni Retnaningtyas, Siswandono Siswodihardjo, Ari Satia Nugraha

Turkish Journal of Chemistry

D-arabinitol is a sugar alcohol that is a typical metabolite of Candida species. The hydroxy group owned by D-arabinitol can function as a reducing agent that can reduce Ag+ to AgNPs. The resulting colloid is further stabilized by the addition of a capping agent. The capping agent used in this study was a combination of chitosan 1%(w/w) and PEG 6000 1% (w/w) (2:1) v/v. The formation of AgNPs causes an increase in the surface plasmon resonance spectra of the colloid solution at a wavelength of 430 nm with a slight blue shift. At the same time, the color of …


Design, Synthesis, And Greener Pasture Biological Assessment Of A Novel Nucleoside: 1-(Α-D-Ribofuranosyl)-6,7-Difluoro-2-Methyl-4-Quinazolinone As An Inhibitor Of Covid-19 And Alzheimer's Disease, Laila M. Break, Adil A. Gobouri, Wafa S. Al-Harthi, Mohamed Hagar, Nadia S. Alkaff, Musa A. Said Jan 2022

Design, Synthesis, And Greener Pasture Biological Assessment Of A Novel Nucleoside: 1-(Α-D-Ribofuranosyl)-6,7-Difluoro-2-Methyl-4-Quinazolinone As An Inhibitor Of Covid-19 And Alzheimer's Disease, Laila M. Break, Adil A. Gobouri, Wafa S. Al-Harthi, Mohamed Hagar, Nadia S. Alkaff, Musa A. Said

Turkish Journal of Chemistry

Synthesis of a new fluorinated nucleoside of 6,7-difluoro-2-methyl-4-quinazolinone was described. 2-Amino-4,5-difluorobenzoic acid 1 reacts with (CH3CO)2O followed by ammonia to form (1H)-6,7-difluoro-2-methyl-4-quinazolinone 3a. Ribosylation of a silylated 4 with l-O-acety1-2,3-5-tri-O-benzoyl-α-D-ribofuranose 5 forms a protected nucleoside 6 then unprotected from 6 to give a free nucleoside 7. Greener pasture biological docking of the cystine protease of COVID-19 [Mpro, code 7BQY, PDB] by novel nucleoside and fluoroquinazoline compounds is presented. LIGPLOT (2D) representations calculated for the same ligands are shown. A superposition of remdesivir approved medicine, N3 inhibitor, and our ligands docked …


A Molecularly Imprinted Polymer As Solid Phase Extraction Sorbent For Ketoprofen Determination In Water And Artificial Serum Prior To Hplc, Eli̇f Gürel Özyurt, Ömer Özyurt, Yekta Arya Ölçer Altinsoy, Ahmet Emi̇n Eroğlu, Ezel Boyaci, Talal Shahwan Jan 2022

A Molecularly Imprinted Polymer As Solid Phase Extraction Sorbent For Ketoprofen Determination In Water And Artificial Serum Prior To Hplc, Eli̇f Gürel Özyurt, Ömer Özyurt, Yekta Arya Ölçer Altinsoy, Ahmet Emi̇n Eroğlu, Ezel Boyaci, Talal Shahwan

Turkish Journal of Chemistry

Ketoprofen (KET) is an active pharmaceutical compound that has pain relieving and antipyretic effects. Its determination in body fluids and environmental waters is important due to widespread use of the compound. In this study, a selective and reliable method has been developed for the determination of ketoprofen in water and artificial serum using molecularly imprinted polymers (MIPs) as a solid phase extraction sorbent prior to HPLC-DAD detection. The MIP was synthesized by copolymerization of methacrylic acid (MAA) and trimethylpropane trimethacrylate (TRIM) in the presence of ketoprofen as the template. For the sake of comparison, nonimprinted polymer (NIP) was also synthesized …


The Sweet And Embellishing Lycium Arabicum Schweinf. Ex Boiss. Fruit Oil: A Potential Source Of Essential Ω-6 And Ω-9 Fatty Acids, Phytosterols, And Carotenoids, Jawhar Fakhfakh, Marwa Affes, Hazem Jabeur, Mohamed Ayadi, Noureddine Allouche Jan 2022

The Sweet And Embellishing Lycium Arabicum Schweinf. Ex Boiss. Fruit Oil: A Potential Source Of Essential Ω-6 And Ω-9 Fatty Acids, Phytosterols, And Carotenoids, Jawhar Fakhfakh, Marwa Affes, Hazem Jabeur, Mohamed Ayadi, Noureddine Allouche

Turkish Journal of Chemistry

In our current phytochemical investigation on the Tunisian plant Lycium arabicum Schweinf. ex Boiss., we attempted to explore the oil obtained from its fruits. This oil was extracted by cold maceration with ethanol and was analyzed to estimate its sterol and fatty acid content. The physicochemical parameters of the oil were also examined. They were specified in terms of acid value (0.8 ± 0.01 mg KOH g-1 oil), peroxide value (10.9 ± 0.02 meq O2 kg-1 oil), saponification value (162.97 ± 0.03 mg KOH g-1 oil), chlorophylls (1.011 ± 0.03 mg kg-1 oil) and carotenoids …


Miscibility And Thermal Behavior Of Poly(Methyl Methacrylate) And Polystyrene Blend Using Benzene As A Common Solvent, Arshiya Iqbal, Jamil Muhammad, Farzana Ahmad, Mohsan Nawaz, Musa Kaleem Baloch, Luqman Mohammad Jan 2022

Miscibility And Thermal Behavior Of Poly(Methyl Methacrylate) And Polystyrene Blend Using Benzene As A Common Solvent, Arshiya Iqbal, Jamil Muhammad, Farzana Ahmad, Mohsan Nawaz, Musa Kaleem Baloch, Luqman Mohammad

Turkish Journal of Chemistry

Polymer blending is one of the advanced technologies to attain polymeric material with tailored properties. In this work, the miscibility of Poly(methyl methacrylate) (PMMA) and Polystyrene (PS) blend in benzene was investigated by employing various techniques such as FTIR spectroscopy, viscosity measurement technique, light scattering techniques, DSC and TGA techniques over an extended range of concentrations, compositions, and temperatures. The results revealed that there exist hydrogen bonding and hydrodynamic interactions which led these polymers to get miscible to a large extent. The compatibility increased with the increasing PS contents or increase in temperature of the system. In addition, the thermal …


Gold Nanoparticles/Over-Oxidized Poly-Eriochrome Black T Film Modified Electrode For Determination Of Arsenic, Mürşi̇de Ceren Afşar, Aydan Elçi̇, Zekerya Dursun Jan 2022

Gold Nanoparticles/Over-Oxidized Poly-Eriochrome Black T Film Modified Electrode For Determination Of Arsenic, Mürşi̇de Ceren Afşar, Aydan Elçi̇, Zekerya Dursun

Turkish Journal of Chemistry

A glassy carbon electrode, modified with gold nanoparticles/over-oxidized poly-eriochrome black T film, was fabricated for sensitive determination of As(III) by stripping voltammetry in an acidic medium. The electrode surface properties were characterized by cyclic voltammetry, electrochemical impedance spectroscopy, scanning electron microscope (SEM), and X-ray photoelectron spectroscopy (XPS). The electrode demonstrated a good response towards As(III), with a detection of 0.077 μM and good linearity in the range of 0.1 to 10 μM (R2 = 0.9977). For the determination of As(III), the fabricated electrode was placed in different mineral water samples, acidified with 0.75 M HCl solution, spiked with various …


Overview On Gplates: Focus On Plate Reconstruction, Shatavisa Chatterjee, Soumyajit Mukherjee Jan 2022

Overview On Gplates: Focus On Plate Reconstruction, Shatavisa Chatterjee, Soumyajit Mukherjee

Turkish Journal of Earth Sciences

Plate tectonic reconstructions have been employed in geosciences since 1970s, in the context of hydrocarbon exploration, regional geology and paleobiology. Such studies have given valuable inputs for climate and geodynamic computations, present-day mantle structure, models of plate motion, and the interpretation of the drift of hotspots, true polar wander (TPW), sea level and stratigraphic signals. However, geodynamic models generated in the past by incorporating global plate tectonic reconstructions have limitations. To overcome this, GPlates software brings forward a new era of interactive plate tectonic reconstruction software integrated with GIS databases that incorporates a wide variety of geological and geophysical data. …


Hydrochemical Characteristics And Geothermometry Applications Of Thermal Waters Inthe Çürüksu Graben, Western Turkey, Ali̇ Gökgöz, Hali̇m Mutlu, Mehmet Ali̇ Akman Jan 2022

Hydrochemical Characteristics And Geothermometry Applications Of Thermal Waters Inthe Çürüksu Graben, Western Turkey, Ali̇ Gökgöz, Hali̇m Mutlu, Mehmet Ali̇ Akman

Turkish Journal of Earth Sciences

In this study, we investigate chemical and isotopic characteristics of low-temperature geothermal waters issuing from carbonate reservoirs in the Çürüksu Graben within the eastern termination of the Büyük Menderes Graben in western Turkey. Temperatures and pH values of geothermal waters vary from 20.1 to 24.6 °C and 6.62 to 7.11 and those of cold waters are 17.1 to 19.9 °C and 6.85 to 7.72, respectively. Geothermal waters are of Ca-HCO3 and Ca-SO4 types whereas cold waters are characterized by these two types and Mg-HCO3 as well. δ18O and δD values of samples vary from ?9.27‰ to -7.69‰ (VSMOW) and -58.06‰ …


Holocene Sedimentary History Of South Danamandıra Lake: A Peatland In West Of İstanbul, Çatalca Peninsula, Nw Turkey, Özlem Makaroğlu, Melda Küçükdemi̇rci̇, Nurgül Karlioğlu, Dursun Acar, Ali̇ Gürel, Rüya Yilmaz Dağdevi̇ren, Nuretti̇n Yakupoğlu, Asen Sabuncu, Damla Şahi̇n Altun, Mustafa Ömer Karaöz, Memet Namik Çağatay Jan 2022

Holocene Sedimentary History Of South Danamandıra Lake: A Peatland In West Of İstanbul, Çatalca Peninsula, Nw Turkey, Özlem Makaroğlu, Melda Küçükdemi̇rci̇, Nurgül Karlioğlu, Dursun Acar, Ali̇ Gürel, Rüya Yilmaz Dağdevi̇ren, Nuretti̇n Yakupoğlu, Asen Sabuncu, Damla Şahi̇n Altun, Mustafa Ömer Karaöz, Memet Namik Çağatay

Turkish Journal of Earth Sciences

This study investigates the sedimentological evolution of the South Danamandıra Lake (SDL) lake in Çatalca Peninsula, 70 km west of İstanbul, using Georadar data and multiproxy analyses of five sediment cores. The lake is a 1.3-m deep, endorheic freshwater peatland, heavily colonised by common reed (Phragmites sp.). The multiproxy core investigations include a lithological core description and environmental magnetism, physical properties (gamma density and magnetic susceptibility), geochemical elemental, pollen and radiocarbon dating analyses. The lithological sequence in the lake consists of an upper peat unit and a lower sand-silt-clay unit. The peat unit is characterized by lower magnetic susceptibility, density …


Late Ediacaran Inertial-Interchange True Polar Wander (Iitpw) Event: A New Road To Reconcile The Enigmatic Paleogeography Prior To The Final Assembly Of Gondwana, Bin Wen, Cairong Luo, Yong-Xiang Li, Yanting Lin Jan 2022

Late Ediacaran Inertial-Interchange True Polar Wander (Iitpw) Event: A New Road To Reconcile The Enigmatic Paleogeography Prior To The Final Assembly Of Gondwana, Bin Wen, Cairong Luo, Yong-Xiang Li, Yanting Lin

Turkish Journal of Earth Sciences

The Ediacaran to Early Cambrian plate tectonics was dominated by a full dispersal of the supercontinent Rodinia and the subsequent amalgamation of Gondwana. There is a consensus that the final assembly of Gondwana was not completed until the Early Cambrian. Prior to the final assembly, however, one major uncertainty remains on the quantitative paleogeography: the mainland of Gondwana was plausibly positioned at either a high or low latitude at a single time instant to meet the dual-latitude ('high-latitude' and 'low-latitude') options of Laurentia and the requirement of


A Preliminary Account On Devonian Trilobites From Arabian Plate, Se Turkey, Catherine Cronier, İzzet Hoşgör Jan 2022

A Preliminary Account On Devonian Trilobites From Arabian Plate, Se Turkey, Catherine Cronier, İzzet Hoşgör

Turkish Journal of Earth Sciences

Recently, several Devonian localities and the related biota occurring from the southeastern Turkey were reinvestigated. Although, the Hakkari-Çukurca and the Diyarbakır-Hazro areas of the Arabian Plate are considered as an important source of the Devonian macrofossils from the north Arabian sector of Gondwana, the existing record of Devonian trilobites in these regions was hitherto unknown. We here report and illustrate for the first time Lower and Middle Devonian trilobites represented by three proetid pygidia and one calymenid pygidium. The morphological features of these pygidia suggest that they can be assigned to undetermined species of Gravicalymene (Calymenidae) and Podoliproetus (Proetidae), two …


Assessment Of Genetic Variation Of Natural Populations Of Wild Cherry (Prunus Avium L.)Via Ssr Markers, Burcu Uzan Eken, Emrah Kirdök, Ercan Veli̇oğlu, Yelda Özden Çi̇ftçi̇ Jan 2022

Assessment Of Genetic Variation Of Natural Populations Of Wild Cherry (Prunus Avium L.)Via Ssr Markers, Burcu Uzan Eken, Emrah Kirdök, Ercan Veli̇oğlu, Yelda Özden Çi̇ftçi̇

Turkish Journal of Botany

Wild cherry (Prunus avium L, syn. Cerasus avium L. Moench.) is a widely spread forest tree that has ecological and economical importance. However, the genetic diversity of this species is threatened for many reasons. Therefore, a breeding and conservation program should be established in order to minimise the loss of genetic diversity. In this study, we aimed to understand the genetic structure of 440 individual wild cherries sampled from 22 different populations in Turkey using 10 SSR molecular markers. With the molecular variance analysis, we found that the genetic diversity within the population is approximately 88.5% and the genetic diversity …


Mining And Analysis Of Chloroplast Simple Sequence Repeats (Ssrs) From Eight Species Of Aquilaria, Muhammad Syahmi Hishamuddin, Ahmad Syazwan Samsuddin, Rozi Mohamed Jan 2022

Mining And Analysis Of Chloroplast Simple Sequence Repeats (Ssrs) From Eight Species Of Aquilaria, Muhammad Syahmi Hishamuddin, Ahmad Syazwan Samsuddin, Rozi Mohamed

Turkish Journal of Botany

Aquilaria is a tropical forest tree, producer of the famed and expensive agarwood. Aggressive collection of agarwood put strain on the natural stands of Aquilaria species, sparking efforts to domesticate the tree and cultivate agarwood in plantations. However, tree domestication progress is hampered by the scarcity of genomic resources that is crucial for breeding programs. In this study, the complete chloroplast (cp) genome sequences from eight Aquilaria species were analyzed in silico. For identification of the simple sequence repeats (SSRs), MISA PERL script which had a repeat length of 12 for mononucleotides (mono-), 6 for dinucleotides (di-), 4 for trinucleotides …


Karyomorphology, Ploidy Analysis, And Flow Cytometric Genome Size Estimation Of Medicago Monantha Populations, Homa Zarabizadeh, Ghasem Karimzadeh, Sajad Rashidi Monfared, Saeed Tarkesh Esfahani Jan 2022

Karyomorphology, Ploidy Analysis, And Flow Cytometric Genome Size Estimation Of Medicago Monantha Populations, Homa Zarabizadeh, Ghasem Karimzadeh, Sajad Rashidi Monfared, Saeed Tarkesh Esfahani

Turkish Journal of Botany

Karayomorphological analysis and monoploid genome size (2Cx DNA) of 12 Iranian Medicago monantha populations are reported. Flow cytometric analysis were conducted on freshly collected seeds, using Solanum lycopersicum cv. Stupicke (2C DNA = 1.96 pg), as the internal reference standard. All populations were diploid with variable degrees of mixoploidy and two different chromosome numbers within each population. Totally, six chromosome numbers of 22, 28, 30, 32, 36, and 40 were identified. Twotyped chromosomes ("m", "sm") with a mean length of 1.65 µm (0.98-2.99 ?m) formed seven different karyotype formulas. Karyotypes were mostly symmetrical, implying the evolutionary effect of natural and …


Phenotypic Strategies For Jasione L. Or The Challenge That Taxonomy Face To Recent Floristic Responses Along Western Eurasia, João Rocha, Paulo Almeida, Rubén Ramírez-Rodríguez, Fátima Sales, Francisco Amich, Antonio Crespi Jan 2022

Phenotypic Strategies For Jasione L. Or The Challenge That Taxonomy Face To Recent Floristic Responses Along Western Eurasia, João Rocha, Paulo Almeida, Rubén Ramírez-Rodríguez, Fátima Sales, Francisco Amich, Antonio Crespi

Turkish Journal of Botany

Jasione L. (Campanulaceae) is regarded as one of the recent floristic responses in western Eurasia. The characterization of the morpho-environmental fluctuating asymmetries (FA) to describe the phenotypic responses for Jasione L. is here exposed. Continuity is pointed out to describe these morpho-environmental responses, as a redundancy effect (RE), in accordance with the significant similarity involved. In this case, 327 individuals and 14 species were investigated (J. sphaerochephala Brullo, Marcenò & Pavone and J. idaea Stoj. synonymized as J. montana L. var. montana and J. supina Sieber ex Spreng. subsp. pontica (Boiss.) Damboldt). J. montana L. and J. heldreichii Boiss. & …