Digital Commons Network^™

Contrasting Nitrogen Sources Impact Nitrogen Use Efficiency And Soil Health Under Silage Corn Production In A Semi-Arid Environment, Phearen Kit Miller

All Graduate Theses and Dissertations, Fall 2023 to Present

Silage corn production challenges sustainable intensification and soil health in semi-arid environments because the entire aboveground biomass is harvested and removed from the field. An irrigated silage corn field study was conducted over a decade comparing nitrogen fertility sources using a complete randomized block design with four treatments: control with no nitrogen fertilizer (control), low ammonium sulfate at 112 kg N ha⁻¹ (AS100), high ammonium sulfate at 224 kg N ha⁻¹ (AS200), and steer manure compost at 224 kg total N ha⁻¹ (compost). Research focused on the impact of these contrasting nitrogen sources on silage corn production, …

Spatiotemporal Dynamics Of Disease: Social And Environmental Drivers Of Movement, Connectivity, And Disease Transmission In Bighorn Sheep, Lauren E. Ricci

All Graduate Theses and Dissertations, Fall 2023 to Present

Movement is a fundamental component of animal ecology. Animals move in order to access resources and avoid risk. Movement decisions aggregated across time determine how individuals use space, contact dynamics between individuals within a population, and connectivity across a species range. These patterns that emerge from movement decisions have downstream implications for many ecological processes and a mechanistic understanding of movement can help answer broader questions about ecology.

Disease dynamics are intrinsically tied to movement. Understanding the mechanisms that drive movement can elucidate how disease will spread and impact host populations. In this vein, I employed a suite of movement …

Experimental Nonnative Wood Addition Enhances Instream Habitat For Native Fishes And Investigating Dryland River Alterations, Benjamin J. Miller

All Graduate Theses and Dissertations, Fall 2023 to Present

The rivers of the Colorado River Basin (CRB) have been degraded by human activities such flow regulation, water overallocation, and the introduction of invasive riparian vegetation (primarily tamarisk tamarix spp. and Russian olive Elaeagnus angustifolia). These stressors have resulted in widespread habitat loss and simplification, which is a major contributor to the endangerment of native fishes in the CRB.

The objectives of this study were to 1) assess the effectiveness of enhancing native fish habitat by experimentally adding cut wood from nonnative Russian olive to the San Juan River, a highly degraded dryland river, and 2) determine the …

Spatial Ecology Of Mule Deer Migrations From Grand Teton National Park And The Teton Range, Justin K. Schwabedissen

All Graduate Theses and Dissertations, Fall 2023 to Present

The Greater Yellowstone Ecosystem hosts several of the longest, fully intact ungulate migrations remaining in the continental United States. However, expanding development and an increasing human footprint continue to truncate migratory routes. While the endpoints are often a seasonal range on protected lands, these migration corridors frequently cross other jurisdictional boundaries, including large tracts of private or multiple-use lands, with varying levels of protection. Thus, it is critical resource managers understand the dynamics of migratory movements to define population-level corridors and prioritize appropriate conservation strategies. Mule deer in Wyoming have been documented traveling long distances between summer and winter ranges; …

A Content Analysis On Emotions Presented In Preschool Children's Television, Sarah Austin

All Graduate Theses and Dissertations, Fall 2023 to Present

Learning about emotions is an essential aspect of early childhood. Because of the increasing access to screen time during the COVID-19 pandemic, children have more resources in their environment to learn from. However, before more can be known about whether children are learning about emotions during their screen time, it is important to know how emotions are being presented to them in their online content. Therefore, this study sought to gather data regarding how four emotions (happiness, sadness, anger, fear) are portrayed verbally and nonverbally among three types of preschool television shows (entertainment, balanced, educational). A sample of 60 preschool …

The Influence Of Individual Strategies On Cougar Ecology: Insights From Predation, Space Use, And Reproduction, Kristin Nicole Engebretsen

All Graduate Theses and Dissertations, Fall 2023 to Present

Carnivores are ecologically important to global ecosystems because they interact with their prey species and other carnivores in a variety of ways. Many carnivores have suffered habitat loss and persecution by humans, which has led some populations to become imperiled or locally extirpated. Despite these challenges, cougars (Puma concolor) continue to exist across North, Central, and South America. They exhibit behavioral adaptation across their wide range, thriving in terrain that ranges from temperate forests, to steppe scrub, to rainforest, to rugged deserts. Across these diverse ecosystems, cougars can successfully establish territories, hunt prey, and raise young to persist …

Online Deception: The Impact Of Language In Text-Based Deception Detection, Stephanie Dayle Avila

All Graduate Theses and Dissertations, Fall 2023 to Present

In today’s digital age, spreading false information online can have serious consequences, from affecting elections to undermining public health efforts. Despite the issue's importance, there’s been relatively little research into better understanding how people make decisions about lies and misinformation online. My project dives into this challenge by exploring how specific language cues, like grammar errors or unusual word choices, influence people’s perception of statements in terms of deceit online. I examined how people react to these cues through three separate but related studies when reading truthful and deceptive statements. The first two studies showed that true statements with grammatical …

Across The Snake River Plain: Terminal Pleistocene, Early Holocene, And Early Middle Holocene Land-Use In Southeast Idaho, Jennifer Finn

All Graduate Theses and Dissertations, Fall 2023 to Present

The range of mobility demonstrated to overcome challenges with resource distribution is a hallmark of hunter-gatherer societies. Previous studies in southeast Idaho have investigated the possibility that precontact human movement was impacted by climatic differences. According to preliminary studies on regional obsidian toolstone conveyance, land use patterns were already changing throughout the early Holocene due to increased aridity. However, the geographical distribution of Northern Side-notched projectile points suggests a significant expansion in mobility at the early Holocene/middle Holocene transition. This thesis tests the hypothesis that precontact early middle Holocene human mobility in the study area was conditioned by environmental factors …

Analyzing The Use Of Agricultural Literacy Assessments: A Descriptive Study Of The Implementation Of The Judd-Murray And The Longhurst-Murray Agricultural Literacy Instruments, Taryn S. Whitaker

All Graduate Theses and Dissertations, Fall 2023 to Present

The purpose of this study was to provide a descriptive snapshot of how the JMALI and LMALI agricultural literacy assessment instruments have been implemented within the United States. It was concluded that the greatest number of respondents used the assessment instruments as formal assessment diagnostic tools to determine agricultural knowledge and improve instruction. When assessments are used as intended, the likelihood they will effectively achieve their intended goals increases.

This study was the first step in determining how agricultural literacy assessments are currently being used. However, future research should focus on improving the collection of agriculture literacy assessment scores and …

Advancing Game Development And Ai Integration: An Extensible Game Engine With Integrated Ai Support For Real-World Deployment And Efficient Model Development, Ryan Anderson

All Graduate Theses and Dissertations, Fall 2023 to Present

This thesis introduces Acacia, a game engine with built-in artificial intelligence (AI) capabilities. Acacia allows game developers to effortlessly incorporate Reinforcement Learning (RL) algorithms into their creations. By tagging game elements to convey information about the game state or rewards, developers gain precise control over how RL algorithms interact with their games, mirroring real player behavior or providing full knowledge of the game world.

To showcase Acacia’s versatility, the thesis presents three games across different genres, each demonstrating the engine’s AI plugin. The goal is to establish Acacia as a preferred resource for creating 2D games with RL support without …

Top-Down Vs Bottom-Up Effects On Predator-Prey Interactions In Aquatic Communities, Catherine Mary Mcclure

All Graduate Theses and Dissertations, Fall 2023 to Present

Ecology is studied at multiple scales to better understand how small changes at the individual level scale up to affect our ecosystems and global systems. These ecological scales include individuals (single organism), populations (group of organisms of the same species), communities (populations of different species interacting with each other), and ecosystems (species interacting with other species and their local environment). The research in this document is focused on the individual, population, and community scale. In particular, this research addresses questions regarding how changes in environmental conditions (i.e., predation and resources) affect species interactions which ultimately affects the composition of ecological …

Artificial Intelligence In Landscape Architecture: A Survey Of Theory, Culture, And Practice, Phillip J. Fernberg

All Graduate Theses and Dissertations, Fall 2023 to Present

This dissertation explores the role of artificial intelligence (AI) in shaping the landscape architecture profession. It looks at how AI has evolved in the field, its current influence, and its potential to change research, teaching, and professional practice. The research includes a detailed review of existing literature to identify trends in AI applications and gaps in knowledge. It also examines landscape architects' attitudes towards AI, revealing a mix of enthusiasm for its benefits and concerns about its impact on creativity and design processes, and proposes new ways of thinking about and working with AI. The work brings a unique perspective …

Do Physical Activity, Diet And Sex Modify The Association Between Neurotrophin Single Nucleotide Polymorphisms And Insomnia?, Hector Leonardo Gonzalez

All Graduate Theses and Dissertations, Fall 2023 to Present

Sleep disturbance is common in older adults at prevalence rates ranging between 30 - 50% in the United States. Neurotrophins such as brain-derived neurotrophic factor (BDNF), play a role in sleep (Bachmann et al., 2012) as do lifestyle factors such as physical activity (Dolezal et al., 2017) and diet. This study examined the associations of selected single nucleotide polymorphisms or SNPs related to BDNF or its receptors and lifestyle factors of physical activity and diet, as well as their interactions on the risk for sleep disturbance in older adult males and females. This thesis examined existing data from the Cache …

Variations On Leitmotif: Firebird Rises, Virginia Beikmann

All Graduate Theses and Dissertations, Fall 2023 to Present

This thesis begins with an introduction that discusses the various influences on the development of the creative novella portion. These influences include Russia literature and folklore, as well as the genres of alternative history and speculative fiction. The novella takes place in a re-imagining of Moscow, Russia during the 1917 Bolshevik Revolution. The novella portion is driven by a close focus on character, with emphasis on reactions to wartime pressures and interpersonal relationships forming the central conflict.

Place-Based Fiction: Tourist Town Stories, Keegan Waller

All Graduate Theses and Dissertations, Fall 2023 to Present

I first conceived of the idea for this short story collection in my early 20's while working as a ski lift operator, bartender, construction worker, and window cleaner in Park City, Utah. At the same time, I was becoming interested in short fiction through the works of authors like Raymond Carver, Chuck Palahniuk, and Charles Bukowski, whose dirty realism has played a large role in the formulation of my thesis. I intend to write a story collection that moves their genre into a more modern setting. While this collection will not fit perfectly into the dirty realist box, the themes …

Role Of Proneurotrophin-P75ntr Signaling In A Mouse Model Of Depression, Kirsten Hodgson

All Graduate Theses and Dissertations, Fall 2023 to Present

Major depressive disorder, or depression, is among the leading causes of disability globally. Despite being a large public health challenge, depression remains difficult to treat as the underlying biology is still unknown and the currently available treatments are limited in effectiveness. This experiment was to test the efficacy of the drug LM11A-31, which works on the signaling pathway of proneurotrophin-p75NTR, a pathway that is not targeted by any currently used antidepressants. Male mice underwent a repeated forced swim, with all the mice receiving saline the first two days and then half the mice receiving saline and half receiving LM11A-31 before …

Empowering Graphics: A Distributed Rendering Architecture For Inclusive Access To Modern Gpu Capabilities, Taylor Anderson

All Graduate Theses and Dissertations, Fall 2023 to Present

Modern rendering software requires powerful GPUs with the latest hardware features in order to utilize all of the newest rendering techniques. Many users do not have access to this hardware, and rely on remote server farms or reduced performance to achieve usable results. In this thesis, the software is designed and created to allow for a user to share the resources of their computer with another, modeling a split-screen setup like was common in the past, but without requiring users to be in the same location.

By designing the software from the ground up to support this, instead of adding …

Environmental Factors Associated With Triploid Aspen Occurrence In Intermountain West Landscapes, James A. Walton

All Graduate Theses and Dissertations, Fall 2023 to Present

Polyploidy is common among plants and can contribute to physiological and morphological differences, altering how plants respond to environmental changes, promoting genetic diversification and even species radiation. Quaking aspen (Populus tremuloides), a keystone species associated with high plant and animal diversity is frequently found in mixed diploid/triploid populations in the Intermountain West. Triploid aspen carries an extra chromosomal copy, whereas the diploid type contains two chromosomal copies. High mortality rates and widespread population declines in aspen are of increasing concern in the Intermountain West, and often ascribed to changing climates and drought stress events. The goal of this …

Acoustic-Perceptual Relations Between Fundamental Frequency And Expressiveness In Speakers With Hypokinetic Dysarthria, Alena Portnova

All Graduate Theses and Dissertations, Fall 2023 to Present

Hypokinetic dysarthria is a motor speech disorder that occurs in patients with Parkinson’s disease (PD) and affects not only their speech intelligibility but also how their attitudes and emotions are perceived by listeners. People with PD have been judged as less happy, involved, friendly, and interested based only on their speech samples. A lack of speech expressiveness is one of the characteristics that is likely to be related to these negative listener judgments. Specifically, it has been suggested that a lack of fundamental frequency (F0) variation reduces speakers’ ability to express various emotions. To investigate whether speech expressiveness is related …

Survival And Cause-Specific Mortality Of Mule Deer In The Eastern Sierra Nevada, California, Usa, Glenden Taylor

All Graduate Theses and Dissertations, Fall 2023 to Present

Survival of adult females is a key driver of population dynamics for ungulate species such as mule deer. Accurate survival estimates are therefore critical knowledge for managers trying to maintain ungulate populations. Additionally, understanding causes of mortality and their effects on populations is vitally important to enacting meaningful and appropriate management decisions. For this project, we estimated annual survival rates of six mule deer herds in the eastern Sierra Nevada, California, USA, and calculated rates of mortality for different causes to better understand factors affecting survival of mule deer in this region.

We estimated baseline annual survival using Cox proportional …

Protein Residue Analysis In Archaeology: A Geological Contamination Experiment, Theresa Popp

All Graduate Theses and Dissertations, Fall 2023 to Present

Protein residue analysis has been used by archaeologists for decades to explore ancient diets and hunting behaviors based on proteins deposited on tools and artifacts, however, protein contamination of buried artifacts has been assumed but lacked formal study. Through a contamination experiment testing different geological contexts (e.g. water movement and freeze-thaw), possible routes of protein contamination within soil were identified, adversely impacting protein residue analysis conducted on buried artifacts. Protein was found to move through soil in large enough concentrations to elicit positive protein residue results on sterile artifacts that never made direct contact with the protein source used in …

Effects Of Serum Potassium On Mortality In Patients With St-Elevation Myocardial Infarction, Colton J Jensen, Jonathan K Nielsen, Matthew M Talbott, Danielle O'Connell, Vivek S Patel, Peyton A Armstrong, Zubaid Rafique, Lillian M Tia, Krishna K Paul, Dietrich V Jehle

Faculty, Staff and Students Publications

Introduction: Disturbances in potassium levels can induce ventricular arrhythmias and heighten mortality in patients with ST-elevation myocardial infarction (STEMI). This study evaluates the influence of sK levels on seven-day mortality and incidence of ventricular arrhythmias in STEMI patients to further improve clinical guidelines and outcomes.

Methods: This retrospective, propensity-matched study analyzed approximately 250,000 acute STEMI patients from 55 major academic medical centers/healthcare organizations (HCOs) in the US Collaborative Network of the TriNetX database. The sK levels recorded on the day of STEMI diagnosis were categorized into four cohorts: sK ≤ 3.4 (hypokalemia), 3.5 ≤ sK ≤ 4.5 (normal-control), 4.6 ≤ …

Selective Cdk7 Inhibition Suppresses Cell Cycle Progression And Myc Signaling While Enhancing Apoptosis In Therapy-Resistant Estrogen Receptor-Positive Breast Cancer, Cristina Guarducci, Agostina Nardone, Douglas Russo, Zsuzsanna Nagy, Capucine Heraud, Albert Grinshpun, Qi Zhang, Allegra Freelander, Mathew Joseph Leventhal, Avery Feit, Gabriella Cohen Feit, Ariel Feiglin, Weihan Liu, Francisco Hermida-Prado, Nikolas Kesten, Wen Ma, Carmine De Angelis, Antonio Morlando, Madison O'Donnell, Sergey Naumenko, Shixia Huang, Quang-Dé Nguyen, Ying Huang, Luca Malorni, Johann S Bergholz, Jean J Zhao, Ernest Fraenkel, Elgene Lim, Rachel Schiff, Geoffrey I Shapiro, Rinath Jeselsohn

Faculty, Staff and Students Publications

Purpose: Resistance to endocrine therapy (ET) and CDK4/6 inhibitors (CDK4/6i) is a clinical challenge in estrogen receptor (ER)-positive (ER+) breast cancer. Cyclin-dependent kinase 7 (CDK7) is a candidate target in endocrine-resistant ER+ breast cancer models and selective CDK7 inhibitors (CDK7i) are in clinical development for the treatment of ER+ breast cancer. Nonetheless, the precise mechanisms responsible for the activity of CDK7i in ER+ breast cancer remain elusive. Herein, we sought to unravel these mechanisms.

Experimental design: We conducted multi-omic analyses in ER+ breast cancer models in vitro and in vivo, including models with different genetic backgrounds. We also performed genome-wide …

Altered Myocardial Lipid Regulation In Junctophilin-2-Associated Familial Cardiomyopathies, Satadru K Lahiri, Feng Jin, Yue Zhou, Ann P Quick, Carlos F Kramm, Meng C Wang, Xander Ht Wehrens

Faculty, Staff and Students Publications

Myocardial lipid metabolism is critical to normal heart function, whereas altered lipid regulation has been linked to cardiac diseases including cardiomyopathies. Genetic variants in the JPH2 gene can cause hypertrophic cardiomyopathy (HCM) and, in some cases, dilated cardiomyopathy (DCM). In this study, we tested the hypothesis that JPH2 variants identified in patients with HCM and DCM, respectively, cause distinct alterations in myocardial lipid profiles. Echocardiography revealed clinically significant cardiac dysfunction in both knock-in mouse models of cardiomyopathy. Unbiased myocardial lipidomic analysis demonstrated significantly reduced levels of total unsaturated fatty acids, ceramides, and various phospholipids in both mice with HCM and …

The Evaluation Of Compound X In A Mouse Model In Chikv Disease, Kaitlyn Blotter

Undergraduate Honors Capstone Projects

Chikungunya virus (CHIKV) is an infectious alphavirus spread by Aedes aegypti and Aedes alpopictus mosquitoes. Recently, there have been various outbreaks in the Americas, the Caribbean, and across Asia and Africa (Bettis et al., 2022). Although mortality rates of Chikungunya disease are relatively low, the disease has been shown to have high morbidity and chronic effects. Currently, there are no approved antivirals for treatment of CHIKV infection. The goal of this study was to identify whether Compound X is an effective treatment in a mouse model of CHIKV infection. Compound X was active in cell culture models of CHIKV infection, …

Chemical-Mediated Mate Attraction In Clover Root Curculio (Sitona Hispidulus F.), A Belowground Pest Of Forage Crops, Kristin Leutgeb

Undergraduate Honors Capstone Projects

Curculionid beetles are well known for their production of semiochemicals, including contact (e.g. cuticular hydrocarbons) and volatile pheromones that mediate conspecific attraction and mating. Clover root curculio (CRC; Sitona hispidulus) in particular is an emergent, soil-borne pest of significant concern to producers of alfalfa and other leguminous crops in the United States. Producers have few control options for CRC and a greater understanding of chemical-mediated attraction in this species can potentially improve the sustainability of its management. To examine which chemical cues are important for affecting the behavior of CRC and whether there are sex-based differences in response, I …

What Is Biological Engineering? – A Magazine, Morgan Christensen

Undergraduate Honors Capstone Projects

Biological Engineering is one of the less commonly known fields of engineering and can be challenging to describe to someone outside the discipline. The most common question I've been asked during my undergraduate career is "What is biological engineering?". My answer has changed throughout my time at Utah State University as I've had more experiences within the discipline. This project focuses on answering this question in the format of a magazine to help bridge the gap between those in the discipline and a general audience. By using a magazine as the format, the content must be organized and written in …

Effects Of Humidity On Native And Non-Native Cavity Nesting Solitary Bees, Elleke Grace Kofford Manwill

Undergraduate Honors Capstone Projects

Invasive species are defined as those that are not native to an ecosystem but may cause harm to the environment or to human health. Osmia cornifrons, a species introduced to the United States, and Osmia lignaria, a native species, are cavity-nesting solitary bees. Although not officially classified as invasive, O. cornifrons presents competition for the niche that O. lignaria inhabits. O. cornifrons has established populations throughout the East Coast and the Pacific Northwest, while O. lignaria is found all throughout the contiguous United States. This interspecies difference in geographical range exists despite their similar temperature ranges. To determine …

Travels In Ireland, Melissa Evelyn Cook

Undergraduate Honors Capstone Projects

“Travels In Ireland” is a creative non-fiction essay with elements of travel writing. It follows my journey around Ireland, including Killarney, Dingle, Kell’s Bay, Castle Desmond, Galway, the Aran Islands and Coole Park. This essay is in communication with other travel writing pieces as I experiment with the genre. In preparation I read many different examples of travel writing including Travels with Charley, Stones of Aran, and On the Shoreline of Knowledge. My initial plan for this project involved studying cultural differences and experimenting with the genre of travel writing. While I began this project without a …

How Variation In Activity Time And Duration At Water Sources Affects Feral Horse Vulnerability To Cougar Predation In Southern Nevada, Katelyn Davies

Undergraduate Honors Capstone Projects

Feral horses have become prominent in the Intermountain West. Approximately 43,000 horses are found in Nevada alone. With increasing numbers, they have become a large portion of ungulate biomass. Thus, it is important to understand their behavior, as they become integrated into western wildlife communities. However, little research has been conducted on the ecology of feral horses, and their relationships with native ungulates, carnivores, and local resources such as water.

To address these concerns, I outlined three objectives: (1) determine if horses changed their water visitation activity times in relation to temperature. As a primarily diurnal species, we were interested …