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An Automated Prognosis System For Estrogen Hormone Status Assessment In Breast Cancer Tissue Samples, Fati̇h Sarikoç, Adem Kalinli, Hülya Akgün, Fi̇gen Öztürk

Turkish Journal of Electrical Engineering and Computer Sciences

Estrogen receptor (ER) status evaluation is a widely applied method in the prognosis of breast cancer. However, testing for the existence of the ER biomarker in a patient's tumor sample mainly depends on the subjective decisions of the doctors. The aim of this paper is to introduce the usage of a machine learning tool, functional trees (FTs), to attain an ER prognosis of the disease via an objective decision model. For this aim, 27 image files, each of which came from a biopsy sample of an invasive ductal carcinoma patient, were scanned and captured by a light microscope. From these …

Integrated Data Fusion And Mining (Idfm) Technique For Monitoring Water Quality In Large And Small Lakes, Benjamin Vannah

Electronic Theses and Dissertations

Monitoring water quality on a near-real-time basis to address water resources management and public health concerns in coupled natural systems and the built environment is by no means an easy task. Furthermore, this emerging societal challenge will continue to grow, due to the ever-increasing anthropogenic impacts upon surface waters. For example, urban growth and agricultural operations have led to an influx of nutrients into surface waters stimulating harmful algal bloom formation, and stormwater runoff from urban areas contributes to the accumulation of total organic carbon (TOC) in surface waters. TOC in surface waters is a known precursor of disinfection byproducts …

Human Intention Recognition Based Assisted Telerobotic Grasping Of Objects In An Unstructured Environment, Karan Hariharan Khokar

USF Tampa Graduate Theses and Dissertations

In this dissertation work, a methodology is proposed to enable a robot to identify an object to be grasped and its intended grasp configuration while a human is teleoperating a robot towards the desired object. Based on the detected object and grasp configuration, the human is assisted in the teleoperation task. The environment is unstructured and consists of a number of objects, each with various possible grasp configurations. The identification of the object and the grasp configuration is carried out in real time, by recognizing the intention of the human motion. Simultaneously, the human user is assisted to preshape over …

Automated Detection Of Vehicles With Machine Learning, Michael N. Johnstone, Andrew Woodward

Australian Information Security Management Conference

Considering the significant volume of data generated by sensor systems and network hardware which is required to be analysed and intepreted by security analysts, the potential for human error is significant. This error can lead to consequent harm for some systems in the event of an adverse event not being detected. In this paper we compare two machine learning algorithms that can assist in supporting the security function effectively and present results that can be used to select the best algorithm for a specific domain. It is suggested that a naive Bayesian classiifer (NBC) and an artificial neural network (ANN) …

Artificial Intelligence And Data Mining: Algorithms And Applications, Jianhong Xia, Fuding Xie, Yong Zhang, Craig Caulfield

Research outputs 2013

Artificial intelligence and data mining techniques have been used in many domains to solve classification, segmentation, association, diagnosis, and prediction problems. The overall aim of this special issue is to open a discussion among researchers actively working on algorithms and applications. The issue covers a wide variety of problems for computational intelligence, machine learning, time series analysis, remote sensing image mining, and pattern recognition. After a rigorous peer review process, 20 papers have been selected from 38 submissions. The accepted papers in this issue addressed the following topics: (i) advanced artificial intelligence and data mining techniques; (ii) computational intelligence in …

Law And Ethics For Autonomous Weapon Systems: Why A Ban Won't Work And How The Laws Of War Can, Kenneth Anderson, Matthew C. Waxman

Faculty Scholarship

Public debate is heating up over the future development of autonomous weapon systems. Some concerned critics portray that future, often invoking science-fiction imagery, as a plain choice between a world in which those systems are banned outright and a world of legal void and ethical collapse on the battlefield. Yet an outright ban on autonomous weapon systems, even if it could be made effective, trades whatever risks autonomous weapon systems might pose in war for the real, if less visible, risk of failing to develop forms of automation that might make the use of force more precise and less harmful …

Visuomotor Learning Enhanced By Augmenting Instantaneous Trajectory Error Feedback During Reaching, James L. Patton, John Wei Yejun, Preeti Bajaj, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

We studied reach adaptation to a 30u visuomotor rotation to determine whether augmented error feedback can promote faster and more complete motor learning. Four groups of healthy adults reached with their unseen arm to visual targets surrounding a central starting point. A manipulandum tracked hand motion and projected a cursor onto a display immediately above the horizontal plane of movement. For one group, deviations from the ideal movement were amplified with a gain of 2 whereas another group experienced a gain of 3.1. The third group experienced an offset equal to the average error seen in the initial perturbations, while …

Resolving Pronominal Anaphora Using Commonsense Knowledge, Seyedeh Leili Javadpour

LSU Doctoral Dissertations

Coreference resolution is the task of resolving all expressions in a text that refer to the same entity. Such expressions are often used in writing and speech as shortcuts to avoid repetition. The most frequent form of coreference is the anaphor. To resolve anaphora not only grammatical and syntactical strategies are required, but also semantic approaches should be taken into consideration. This dissertation presents a framework for automatically resolving pronominal anaphora by integrating recent findings from the field of linguistics with new semantic features. Commonsense knowledge is the routine knowledge people have of the everyday world. Because such knowledge is …

On Identifying Critical Nuggets Of Information During Classification Task, David Sathiaraj

LSU Doctoral Dissertations

In large databases, there may exist critical nuggets - small collections of records or instances that contain domain-specific important information. This information can be used for future decision making such as labeling of critical, unlabeled data records and improving classification results by reducing false positive and false negative errors. In recent years, data mining efforts have focussed on pattern and outlier detection methods. However, not much effort has been dedicated to finding critical nuggets within a data set. This work introduces the idea of critical nuggets, proposes an innovative domain-independent method to measure criticality, suggests a heuristic to reduce the …

Digital Image-Based Frameworks For Monitoring And Controlling Of Particulate Systems, Bing Zhang

LSU Doctoral Dissertations

Particulate processes have been widely involved in various industries and most products in the chemical industry today are manufactured as particulates. Previous research and practise illustrate that the final product quality can be influenced by particle properties such as size and shape which are related to operating conditions. Online characterization of these particles is an important step for maintaining desired product quality in particulate processes. Image-based characterization method for the purpose of monitoring and control particulate processes is very promising and attractive. The development of a digital image-based framework, in the context of this research, can be envisioned in two …

Law And Ethics For Autonomous Weapon Systems: Why A Ban Won't Work And How The Laws Of War Can, Kenneth Anderson, Matthew Waxman

Scholarly Articles in Law Reviews & Journals

Stanford University, The Hoover Institution (Jean Perkins Task Force on National Security and Law Essay Series) American University Washington College of Law Research Paper No. 2013-11 Columbia Public Law Research Paper 13-351 Abstract: Public debate is heating up over the future development of autonomous weapon systems. Some concerned critics portray that future, often invoking science-fiction imagery, as a plain choice between a world in which those systems are banned outright and a world of legal void and ethical collapse on the battlefield. Yet an outright ban on autonomous weapon systems, even if it could be made effective, trades whatever risks …

Computationally Efficient Confidence Intervals For Cross-Validated Area Under The Roc Curve Estimates, Erin Ledell, Maya L. Petersen, Mark J. Van Der Laan

U.C. Berkeley Division of Biostatistics Working Paper Series

In binary classification problems, the area under the ROC curve (AUC), is an effective means of measuring the performance of your model. Most often, cross-validation is also used, in order to assess how the results will generalize to an independent data set. In order to evaluate the quality of an estimate for cross-validated AUC, we must obtain an estimate for its variance. For massive data sets, the process of generating a single performance estimate can be computationally expensive. Additionally, when using a complex prediction method, calculating the cross-validated AUC on even a relatively small data set can still require a …

A Submodular Optimization Framework For Never-Ending Learning : Semi-Supervised, Online, And Active Learning., Wael Emara

Electronic Theses and Dissertations

The revolution in information technology and the explosion in the use of computing devices in people's everyday activities has forever changed the perspective of the data mining and machine learning fields. The enormous amounts of easily accessible, information rich data is pushing the data analysis community in general towards a shift of paradigm. In the new paradigm, data comes in the form a stream of billions of records received everyday. The dynamic nature of the data and its sheer size makes it impossible to use the traditional notion of offline learning where the whole data is accessible at any time …

Learning Understandable Classifier Models., Jan Chorowski

Electronic Theses and Dissertations

The topic of this dissertation is the automation of the process of extracting understandable patterns and rules from data. An unprecedented amount of data is available to anyone with a computer connected to the Internet. The disciplines of Data Mining and Machine Learning have emerged over the last two decades to face this challenge. This has led to the development of many tools and methods. These tools often produce models that make very accurate predictions about previously unseen data. However, models built by the most accurate methods are usually hard to understand or interpret by humans. In consequence, they deliver …

Identification Of Tcp Protocols, Juan Shao

School of Computing: Dissertations, Theses, and Student Research

Recently, many new TCP algorithms, such as BIC, CUBIC, and CTCP, have been deployed in the Internet. Investigating the deployment statistics of these TCP algorithms is meaningful to study the performance and stability of the Internet. Currently, there is a tool named Congestion Avoidance Algorithm Identification (CAAI) for identifying the TCP algorithm of a web server and then for investigating the TCP deployment statistics. However, CAAI using a simple k-NN algorithm can not achieve a high identification accuracy. In this thesis, we comprehensively study the identification accuracy of five popular machine learning models. We find that the random forest model …

Zheng Classification In Traditional Chinese Medicine Based On Modified Specular-Free Tongue Images, Ratchadaporn Kanawong, Tayo Obafemi-Ajayi, Jun Yu, Dong Xu, Shao Li, Ye Duan

Electrical and Computer Engineering Faculty Research & Creative Works

Traditional Chinese Medicine practitioners usually observe the color and coating of a patient's tongue to determine ZHENG (such as Cold or Hot ZHENG) and to diagnose different stomach disorders including gastritis. In our previous work, we explored new modalities for clinical characterization of ZHENG in gastritis patients via tongue image analysis using various supervised machine-learning algorithms. We proposed a system that learns from the clinical practitioner's subjective data how to classify a patients health status by extracting meaningful features from tongue images based on color-space models. In this paper, we propose an enhancement to the ZHENG classification system: a coating …

Features For Automated Tongue Image Shape Classification, Tayo Obafemi-Ajayi, Ratchadaporn Kanawong, Dong Xu, Shao Li, Ye Duan

Electrical and Computer Engineering Faculty Research & Creative Works

Inspection of the tongue is a key component in Traditional Chinese Medicine. Chinese medical practitioners diagnose the health status of a patient based on observation of the color, shape, and texture characteristics of the tongue. The condition of the tongue can objectively reflect the presence of certain diseases and aid in the differentiation of syndromes, prognosis of disease and establishment of treatment methods. Tongue shape is a very important feature in tongue diagnosis. A different tongue shape other than ellipse could indicate presence of certain pathologies. In this paper, we propose a novel set of features, based on shape geometry …

Bayesian Test Analytics For Document Collections, Daniel David Walker

Theses and Dissertations

Modern document collections are too large to annotate and curate manually. As increasingly large amounts of data become available, historians, librarians and other scholars increasingly need to rely on automated systems to efficiently and accurately analyze the contents of their collections and to find new and interesting patterns therein. Modern techniques in Bayesian text analytics are becoming wide spread and have the potential to revolutionize the way that research is conducted. Much work has been done in the document modeling community towards this end,though most of it is focused on modern, relatively clean text data. We present research for improved …

A Confidence-Prioritization Approach To Data Processing In Noisy Data Sets And Resulting Estimation Models For Predicting Streamflow Diel Signals In The Pacific Northwest, Nathaniel Lee Gustafson

Theses and Dissertations

Streams in small watersheds are often known to exhibit diel fluctuations, in which streamflow oscillates on a 24-hour cycle. Streamflow diel fluctuations, which we investigate in this study, are an informative indicator of environmental processes. However, in Environmental Data sets, as well as many others, there is a range of noise associated with individual data points. Some points are extracted under relatively clear and defined conditions, while others may include a range of known or unknown confounding factors, which may decrease those points' validity. These points may or may not remain useful for training, depending on how much uncertainty they …

On The K-Mer Frequency Spectra Of Organism Genome And Proteome Sequences With A Preliminary Machine Learning Assessment Of Prime Predictability, Nathan O. Schmidt

Boise State University Theses and Dissertations

A regular expression and region-specific filtering system for biological records at the National Center for Biotechnology database is integrated into an object oriented sequence counting application, and a statistical software suite is designed and deployed to interpret the resulting k-mer frequencies|with a priority focus on nullomers. The proteome k-mer frequency spectra of ten model organisms and the genome k-mer frequency spectra of two bacteria and virus strains for the coding and non-coding regions are comparatively scrutinized. We observe that the naturally-evolved (NCBI/organism) and the artificially-biased (randomly-generated) sequences exhibit a clear deviation from the artificially-unbiased (randomly-generated) histogram distributions. …

Making Sense Of Sensor Data Using Ontology: A Discussion For Road Vehicle Classification, Markus Stocker, Mauno Rönkkö, Mikko Kolehmainen

International Congress on Environmental Modelling and Software

In environmental engineering, sensor measurement is a process undertaken with respect to an environmental domain, i.e. an area of interest, to measure a domain property. Knowledge of a domain, meaning its concepts and relations that hold among them, can be formally represented by means of ontology. Therefore, given an ontology for an environmental domain, it seems reasonable to suggest that sensor data acquisition can be translated into ontological knowledge acquisition. We demonstrate this translation for the domain of road vehicle classification by measurement of vibration. We show how supervised machine learning is applied to learn a function that maps sensor …

On The Automatic Recognition Of Human Activities Using Heterogeneous Wearable Sensors, Oscar David Lara Yejas

USF Tampa Graduate Theses and Dissertations

Delivering accurate and opportune information on people's activities and behaviors has become one of the most important tasks within pervasive computing. Its wide spectrum of potential applications in medical, entertainment, and tactical scenarios, motivates further

research and development of new strategies to improve accuracy, pervasiveness, and eciency.

This dissertation addresses the recognition of human activities (HAR) with wearable sensors in three main regards: In the rst place, physiological signals have been incorporated as a new source of information to improve the recognition accuracy achieved by conventional approaches, which rely on accelerometer signals solely. A new HAR system, Centinela, was born …

Bayesian And Related Methods: Techniques Based On Bayes' Theorem, Mehmet Vurkaç

Systems Science Friday Noon Seminar Series

Bayes' theorem is a simple algebraic consequence of conditional probability. Yet, its consequences are critical to philosophy, society, and technology. Starting from its simple derivation, we will show how its interpretation in terms of base rates (priors) and class-conditional likelihoods illuminates everyday problems in medicine and law, and provides signal processing, communications, machine learning, model selection, and other applications of statistics with powerful classification and estimation tools. Next, we will briefly examine some of the ways in which this theorem can be adopted to include multiple attributes, contexts, hypotheses, and levels of risk. Methods derived from or related to Bayes’ …

Bayesian Nonparametric Clusterings In Relational And High-Dimensional Settings With Applications In Bioinformatics., Dazhuo Li

Electronic Theses and Dissertations

Recent advances in high throughput methodologies offer researchers the ability to understand complex systems via high dimensional and multi-relational data. One example is the realm of molecular biology where disparate data (such as gene sequence, gene expression, and interaction information) are available for various snapshots of biological systems. This type of high dimensional and multirelational data allows for unprecedented detailed analysis, but also presents challenges in accounting for all the variability. High dimensional data often has a multitude of underlying relationships, each represented by a separate clustering structure, where the number of structures is typically unknown a priori. To address …

The Glass Is Half-Full: Overestimating The Quality Of A Novel Environment Is Advantageous, Oded Berger-Tal, Tal Avgar

Wildland Resources Faculty Publications

According to optimal foraging theory, foraging decisions are based on the forager's current estimate of the quality of its environment. However, in a novel environment, a forager does not possess information regarding the quality of the environment, and may make a decision based on a biased estimate. We show, using a simple simulation model, that when facing uncertainty in heterogeneous environments it is better to overestimate the quality of the environment (to be an “optimist”) than underestimate it, as optimistic animals learn the true value of the environment faster due to higher exploration rate. Moreover, we show that when the …

A Review Of Situation Identification Techniques In Pervasive Computing, Juan Ye, Simon Dobson, Susan Mckeever

Articles

Pervasive systems must offer an open, extensible, and evolving portfolio of services which integrate sensor data from a diverse range of sources. The core challenge is to provide appropriate and consistent adaptive behaviours for these services in the face of huge volumes of sensor data exhibiting varying degrees of precision, accuracy and dynamism. Situation identification is an enabling technology that resolves noisy sensor data and abstracts it into higher-level concepts that are interesting to applications. We provide a comprehensive analysis of the nature and characteristics of situations, discuss the complexities of situation identification, and review the techniques that are most …

Sports Data Mining Technology Used In Basketball Outcome Prediction, Chenjie Cao

Dissertations

Driven by the increasing comprehensive data in sports datasets and data mining technique successfully used in different area, sports data mining technique emerges and enables us to find hidden knowledge to impact the sport industry. In many instances, predicting the outcomes of sporting events has always been a challenging and attractive work and is therefore drawing a wide concern to conduct research in this field. This project focuses on using machine learning algorithms to build a model for predicting the NBA game outcomes and the algorithms involve Simple Logistics Classifier, Artificial Neural Networks, SVM and Naïve Bayes. In order to …

A Study Of Localization And Latency Reduction For Action Recognition, Syed Zain Masood

Electronic Theses and Dissertations

The success of recognizing periodic actions in single-person-simple-background datasets, such as Weizmann and KTH, has created a need for more complex datasets to push the performance of action recognition systems. In this work, we create a new synthetic action dataset and use it to highlight weaknesses in current recognition systems. Experiments show that introducing background complexity to action video sequences causes a significant degradation in recognition performance. Moreover, this degradation cannot be fixed by fine-tuning system parameters or by selecting better feature points. Instead, we show that the problem lies in the spatio-temporal cuboid volume extracted from the interest point …

Classifying Emotion Using Streaming Of Physiological Correlates Of Emotion, Nathan J. Elmore

Graduate Student Theses, Dissertations, & Professional Papers

The ability for a computer to recognize emotions would have many uses. In the field of human-computer interaction, it would be useful if computers could sense if a user is frustrated and offer help (Lisetti & Nasoz, 2002), or it could be used in cars to predict stress or road rage (Nasoz, Lisetti, & Vasilakos, 2010). Also, it has uses in the medical field with emotional therapy or monitoring patients (Rebenitsch, Owen, Brohil, Biocca, & Ferydiansyah, 2010). Emotion recognition is a complex subject that combines psychology and computer science, but it is not a new problem. When the question was …

Probabilistic Framework For Image Understanding Applications Using Bayesian Networks, Mustafa Jaber

Theses

Machine learning algorithms have been successfully utilized in various systems/devices. They have the ability to improve the usability/quality of such systems in terms of intelligent user interface, fast performance, and more importantly, high accuracy. In this research, machine learning techniques are used in the field of image understanding, which is a common research area between image analysis and computer vision, to involve higher processing level of a target image to "make sense" of the scene captured in it. A general probabilistic framework for image understanding where topics associated with (i) collection of images to generate a comprehensive and valid database, …