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Editor's Commentary: On The Process Of Upwelling, Kenneth H. Brink

Journal of Marine Research

Although Harald Sverdrup is now probably best known for his work on basin-scale ocean circulation, his interests were remarkably diverse, and included continental shelf processes. As a coastal oceanographer, I can’t resist highlighting this contribution to the coastal upwelling literature. A relatively simple data set is exploited here, consisting of cross-shelf sections taken near Point Conception, California...

Observations Of Nonlinear Momentum Fluxes Over The Inner Continental Shelf, Thomas P. Connolly, Steven J. Lentz

Journal of Marine Research

Nonlinear momentum fluxes over the inner continental shelf are examined using moored observations from multiple years at two different locations in the Middle Atlantic Bight. Inner shelf dynamics are often described in terms of a linear alongshore momentum balance, dominated by frictional stresses generated at the surface and bottom. In this study, observations over the North Carolina inner shelf show that the divergence of the cross-shelf flux of alongshore momentum is often substantial relative to the wind stress during periods of strong stratification. During upwelling at this location, offshore fluxes of alongshore momentum in the surface layer partially balance the …

Editor's Commentary: Control Of Salinity In An Estuary By A Transition, Kenneth H. Brink, Harlow G. Farmer

Journal of Marine Research

In 1900, Martin Knudson (Knudson 1900; Burchard et al. 2018) considered the salt and volume fluxes for a steady-state estuary. He arrived at very useful relationships between the flux of fresh water coming in from upstream compared to the output salinity and volume flux. While these relations are fundamental and extremely useful, they do not close the problem. Rather, there is always one more piece of information needed; for example, to know the flux of brackish water onto the shelf, you still have to know the outflow salinity...

Classic Article: On Properties Of Seawater Defined By Temperature, Salinity, And Pressure, George Veronis

Journal of Marine Research

Hydrographic station data, consisting principally of temperature and salinity determinations, have been used by physical oceanographers to develop a climatological picture of the distribution of these quantities in the oceans of the world. Density as determined by Knudsen's formula, taken together with hydrostatic and geostrophic dynamics, also provides a crude picture of oceanic flow. However, the data probably contain substantially more information than has been derived from them in the past.The quantity that is orthogonal to potential-density curves in the θS plane is suggested as a useful variable to complement the information contained in potential density. The derivation of …

Nitrogen Cycling In Muddy Sediments Of Great Peconic Bay, Usa: Seasonal N Reaction Balances And Multi-Year Flux Patterns, Stuart Waugh, Robert C. Aller

Journal of Marine Research

To better understand the capacity of sediments to serve as both source and sink of nitrogen (N) and to identify any evidence of evolving changes in sedimentary N cycling, N₂ production, N remineralization, and N₂ fixation were studied over a multi-year period (2010–2015) in bioturbated mud of Great Peconic Bay, a temperate northeastern U. S. estuary. Benthic fluxes and rates of organic matter remineralization were measured using in situ and ex situ incubations. Net annual NH⁺ ₄, NO–₃/NO–₂, and N₂–N fluxes (μ = 1.1, 0.03, and 1.2 mmol m ^{–2 …}

Density And Size-Dependent Bioturbation Effects Of The Infaunal Polychaete Nephtys Incisa On Sediment Biogeochemistry And Solute Exchange, Emma Michaud, Robert C. Aller, Qingzhi Zhu, Christina Heilbrun, Georges Stora

Journal of Marine Research

The impact of bioturbation on the geochemistry of aquatic sediments is known to depend on the benthic infauna species that are present. However, burrowing and activity patterns of each species may also change during the different stages of a life cycle. In this study, we examined the effects of four size classes of the polychaete Nephtys incisa on burrow networks and sediment biogeochemistry. In our experimental aquaria, the total biovolume (~ biomass) of Nephtys was kept constant, but different age classes were introduced, so the size and abundance varied between treatments. Despite differences in the geometry of burrow networks (due …

Master Of Environmental Management Needs Assessment 2021, Matthew May, Mackenzie Moss

Idaho Policy Institute Reports

To better understand the potential impact of a Master of Environmental Management (MEM) program at Boise State University, Idaho Policy Institute (IPI) was asked to assess peer programs across the nation, as well as employment opportunities for individuals with this skill set. IPI’s analysis included a review of peer program websites, interviews with peer program directors, an online survey of PhD program directors in related fields, analysis of job listings, and both an online survey and interviews with potential employers.

Key findings of IPI’s analysis include:

• Peer programs tend to target working professionals who are interested in advancing their existing …

Improved De Novo Alignment Of A Girardia Dorotocephala Ma-C2 (2n = 24) Transcriptome, Labib Rouhana, J F. Ryan, Eugene M. P. Almazan

Biological Sciences Faculty Publications

Improved De novo alignment of a Girardia dorotocephala MA-C2 (2n = 24) transcriptome.

Oct4 Cooperates With Distinct Atp-Dependent Chromatin Remodelers In Naïve And Primed Pluripotent States In Human, Xin Huang, Kyoung-Mi Park, Paul Gontarz, Bo Zhang, Laura A. Fischer, Chen Dong, Sabine Dietmann, Xiaoyun Xing, Shafqat A. Khan, Nick Jensen, Ting Wang, Thorold W. Theunissen, Et Al

Open Access Publications

No abstract provided.

Arboretum Annual Report, 2021, Miles Schwartz Sax

Annual Reports

No abstract provided.

Utilization Of Extracorporeal Membrane Oxygenation During The Covid-19 Pandemic., A. Kichloo, A. Kumar, R. Amir, M. Aljadah, N. Farooqi, M. Albosta, J. Singh, S. Jamal, Z. El-Amir, N. Lone, +1 Additional Author

Journal Articles

The ongoing outbreak of severe acute respiratory syndrome coronavirus-2 [SARS-CoV-2, or coronavirus disease 2019 (COVID-19)] was declared a pandemic by the World Health Organization on March 11, 2020. Worldwide, more than 65 million people have been infected with this SARS-CoV-2 virus, and over 1.5 million people have died due to the viral illness. Although a tremendous amount of medical progress has been made since its inception, there continues to be ongoing research regarding the pathophysiology, treatments, and vaccines. While a vast majority of those infected develop only mild to moderate symptoms, about 5% of people have severe forms of infection …

Professionally Responsible Coronavirus Disease 2019 Vaccination Counseling Of Obstetrical And Gynecologic Patients, F. A. Chervenak, L. B. Mccullough, E. Bornstein, L. Johnson, A. Katz, R. Mcleod-Sordjan, M. Nimaroff, B. L. Rochelson, A. Tekbali, A. Warman, K. Williams, A. Grünebaum

Journal Articles

© 2021 Elsevier Inc. The development of coronavirus disease 2019 vaccines in the current and planned clinical trials is essential for the success of a public health response. This paper focuses on how physicians should implement the results of these clinical trials when counseling patients who are pregnant, planning to become pregnant, breastfeeding or planning to breastfeed about vaccines with government authorization for clinical use. Determining the most effective approach to counsel patients about coronavirus disease 2019 vaccination is challenging. We address the professionally responsible counseling of 3 groups of patients—those who are pregnant, those planning to become pregnant, and …

Criminalization And Normalization: Some Thoughts About Offenders With Serious Mental Illness, Richard C. Boldt

Faculty Scholarship

Response to Professor E. Lea Johnston, Reconceptualizing Criminal Justice Reform for Offenders with Serious Mental Illness

Abstract

While Professor Johnston is persuasive that clinical factors such as diagnosis and treatment history are not, in most cases, predictive by themselves of criminal behavior, her concession that those clinical factors are associated with a constellation of risks and needs that are predictive of criminal system involvement complicates her efforts to maintain a clear boundary between the criminalization theory and the normalization thesis. Indeed, Professor Johnston’s article contains a brief section in which she identifies “possible justifications” for the specialized programs that are …

Contract's Influence On Feminism And Vice Versa, Martha M. Ertman

Faculty Scholarship

Feminist legal theory has both embraced and rejected contract. While contract-based conceptual and doctrinal tools have improved women’s economic and social status, feminists also critique contract-based reforms for colluding with hierarchies of gender, race and class. This chapter charts influential work on both sides of the contract debate and identifies a third approach that sees contract as a mechanism for law to move away from a hierarchal regime by stopping at a contractual way station en route to a more equal system of public ordering. It concludes by identifying ways that feminist legal theorists have injected feminist insights into traditional …

Disposable Lives: Covid-19, Vaccines, And The Uprising, Matiangai Sirleaf

Faculty Scholarship

Two French doctors appeared on television and publicly discussed potentially utilizing African subjects in experimental trials for a tuberculosis vaccine as an antidote to the novel coronavirus (COVID-19). Tedros Adhanom Ghebreyesus, the Director-General of the World Health Organization (WHO), denounced these kinds of racist remarks as a “hangover from ‘colonial mentality’” and maintained that “Africa can’t and won’t be a testing ground for any vaccine.” The fallout on social media was similarly swift, with Samuel Eto’o, a Cameroonian football legend, referring to the doctors as “[d]es assasins” and several others questioning the motives behind testing a vaccine on the African …

Graduate Record 2021, Southwestern Oklahoma State University

SWOSU Yearbooks

SWOSU Specialized Publications class has been working diligently to make this graduate record memorable for our graduates. We have come up with many different ways to make this one special for all those who worked hard to get their degrees. This year was limited due to canceled events and restricted interaction due to COVID-19 precautions.

Analysis Of Amino Acids, Fatty Acids And Neurotoxins Using Gas Chromatography-Massspectrometry In Four Scorpions Species Inhabiting New Valley Governorate, Egypt, Shimaa Mohamed Said, Ahmad Hamed Obuid-Allah, Naser Abd-Elatif El-Shimy, Rouwaida Saadawy Ali, Mohamed Abd-Elmoez Mahbob

Turkish Journal of Zoology

The scorpion venom consisting of a pair of gland connected to telson has great importance for their survival, assisting in feeding and self-defense. Scorpion venoms are a complex mixture of inorganic salts, free amino acids, heterocyclic components, peptides and proteins. The present study aimed to identify telson components of four scorpion species Leiurus quinquestriatus, Androctonus amoreuxi, Orthochirus innesi and Buthacus leptochelys. Five telsons separated from four species of scorpions were preserved in 100% ethanol, homogenized in acetonitrile, centrifuged and sonicated as preparation of gas chromatography mass spectrometry (GC-MS) analysis. The present study indicated variations in the number and types of …

Effect Of Breeds On Heat-Evoked Gene Responses In Sheep Adipose Tissue, Dong Zhang, Ing Pan, Huanmin Zhou, Yu Cao

Turkish Journal of Zoology

Sheep is one of the ungulates and critical for animal husbandry development like on grassland, whereas there are few pieces of research about their heat responses to date. In the present study, we selected two sheep breeds consisting of Mongolian sheep with evolving cold resistibility and Dorper sheep specifically bred for heat tolerance to explore how the different breeds of sheep positively respond to heat conditions. Three Mongolian sheep and 3 Dorper sheep underwent 37 $^{o}$C stress (2 h per day) during 4 weeks. The energy metabolism-associated adipose tissues of the experimental subjects were sampled, prepared and performed to RNA-seq …

The Effect Of Streptomycin On Survival, Development, And Some Biochemical Aspects Ofdrosophila Melanogaster, Volkan Keleş, Kemal Büyükgüzel, Ender Büyükgüzel

Turkish Journal of Zoology

The effects of an aminoglycoside antibiotic, streptomycin, on survival rate, development time, and adult longevity of Drosophila melanogaster (Diptera: Drosophilidae) were examined by adding on the artificial diet at different concentrations in laboratory condition. The effect of streptomycin on malondialdehyde (MDA) and protein carbonyl (PCO) contents, superoxide dismutase (SOD), and catalase (CAT) activities in all developmental stages of D. melanogaster was also investigated. First-instar larvae were reared into diets with 600 mg/L, 1200 mg/L, and 1800 mg/L of streptomycin concentrations and were fed until the adult emergence. The highest concentration of streptomycin significantly reduced the survival rates of all development …

Revision Of Common Snipe, Gallinago Gallinago In Morphometric Analysis And Buildingthe Standard Reference Haematological Values For Further Studies, Ahmad Waheed, Kamran Jafar, Muhammad Saleem Khan, Muhammad Wajid, Shamoon Ali, Muhammad Waseem Aslam, Shabbir Ahmad

Turkish Journal of Zoology

This study was designed to record some morphometric and haematological parameters of common snipe, Gallinago gallinago. For this purpose, 20 individuals (10 male, 10 female) were collected from the wetlands of District Bahawalnagar, Punjab, Pakistan. Significant differences between the sexes were recorded in tail length, length of longest primary feather, and chest circumference. . No significant difference was recorded in haematological parameters between the sexes. Gut analysis revealed that common snipe feed mostly on Chironomidae and Ceratopogonidae larvae and male and female snipes have the same food preference.

Molecular Identification Of Eriophyoid Mites In Thrace Using The 28s And Coi Genes, Emre İnak, Evsel Deni̇zhan, Esengül Özdemi̇r

Turkish Journal of Zoology

Eriophyoid mites are recognized as the second most economically important group among the Acari following spider mites. The identification of eriopyhoid mites traditionally based on morphological characters. However, the size of these diagnostic structures is very small and this often causes misidentification of species. In this study, we used DNA-based identification for five eriophyoid species collected from the Thrace region of Turkey (Aceria erinea, Rhyncaphytoptus ficifoliae, Eriophyes pyri, Aceria massalongoi, Colomerus vitis collected from Juglans regia L., Ficus carica L., Pyrus communis L., Vitex-agnus castus L., Vitis vinifera L., respectively) using both cytochrome oxidase subunit I (MW396744-MW396748) and 28S rRNA …

Male-Biased In-Water Population Of Loggerhead Turtle (Caretta Caretta ) In Dalyan, Turkey As Apossible Important Marine Turtle Area In The Mediterranean, Doğan Sözbi̇len, Eyup Başkale, Yakup Kaska

Turkish Journal of Zoology

In this study, we present the first in-water monitoring results of loggerhead turtles (Caretta caretta) in Köyceğiz-Dalyan specially protected area (SPA), Turkey. The capture-mark-recapture (CMR) study encompassed a total of 113 capture events of 88 individuals across two sampling years. The majority of the population was adults (88.6%) with a highly male-biased (70.5%) sex ratio. Our results indicate that some of the overwintering individuals also contribute to the nesting population in the region. Biometric characteristics of captured individuals were also presented. Additionally, we found the population to be under heavy anthropogenic threats with 54.5% of the captured individuals exhibiting results …

A Lessepsian Invader Round Herring (Etrumeus Golanii) With High Genetic Diversitywithout Bottlenecking In The Northeastern Mediterranean Sea, Solmaz Ezgi̇ Çi̇ftci̇, Fevzi̇ Bardakci

Turkish Journal of Zoology

In this study, population genetic structure and genetic diversity of round herring in the Turkish seas were determined using sequence data of mitochondrial DNA control region. Round herring, Etrumeus golanii samples were collected from three localities along the Turkish coast of the Mediterranean Sea, (Gulf of İskenderun and Gulf of Antalya) and southern Aegean Sea (Gulf of Marmaris). Genetic variability was high both within and between the populations based on haplotype diversity values. The results have shown that each population has a high genetic diversity with unique mtDNA haplotypes with unique genetic structure. The most important factor in the emergence …

Interspecific And Intraspecific Size And Shape Variation In Skull Of Two Closely Relatedspecies Bufo Bufo (Linnaeus, 1758) And Bufo Verrucosissimus (Pallas, 1814) From Turkey, Nazan Üzüm, Nurhayat Özdemi̇r, Canteki̇n Dursun, Bi̇lal Kutrup, Serkan Gül

Turkish Journal of Zoology

Anurans are the most suitable vertebrate group to see the development and also evolution in the skull, compared to other terrestrial vertebrates as they show highly derived morphology. For this reason, the cranium of anurans has been widely used for analyzing e.g., development and integration, evolutionary history, phylogenetic relationships, sexual dimorphism; and for taxon determination. We applied geometric morphometric techniques and then multivariate statistical analyses to see the skull size and shape variations in closely related Bufo species (B. bufo and B. verrucosissimus) inhabiting Turkey. Females have larger skull than males for both species. Ventral skull size of males differed …

Review On Antimicrobial Peptides From Malaysian Amphibian Resources: Status, Researchapproaches And Ways Forward, Dasi Ong, Shahriza Shahrudin, Mohd Nazri Ismail

Turkish Journal of Zoology

Antimicrobial resistance (AMR) is a significant threat to human health globally. Diseases caused by AMR are getting more challenging to cure due to the increasing rate of resistance of microbial pathogens. Drugs formulated with antimicrobial peptide (AMP) can be applied to treat these diseases. AMPs are found naturally within organisms, especially amphibians, and is related to the high adaptability of defence mechanisms against various pathogens and predators in the environment. This review focuses on the current status of research works and the different approaches applied to stimulate and collect amphibian secretions, extract and identify peptides, and conduct antimicrobial assays. The …

Spatial Variation Of Larval Ascaridoid Nematode (Nematoda: Chromadorea: Ascaridoidea)Infections In The Black Sea Anchovy (Engraulis Encrasicolus), Gi̇zem Akkuş, Ali̇ Cemal Gücü

Turkish Journal of Zoology

This study evaluates the Black Sea anchovy population infected by parasitic Ascaridoid Nematode larva in the Southern Black Sea. It assesses the larva?s effect on fish body condition, energy stored in the body, and anchovy growth. For this, anchovies sampled on July 10-31, 2018, from 30 different stations were examined, and 11.8% of the 825 anchovies were found infected. The observed infection rate was higher on the western side of the study area, suggesting that this rate may be used as a biomarker for the western stock. Age and size of the anchovies play a significant role in the prevalence. …

Inferring Phylogenetic Relationships In The Common Vole (Microtus Arvalis) Based Onmitochondrial And Nuclear Sequence Diversities, Derya Çeti̇ntürk, Nuri̇ Yi̇ği̇t, Ercüment Çolak, Georgi̇ Markov, Dusko Cirovic, Mihály Márton

Turkish Journal of Zoology

The common vole Microtus arvalis (Pallas, 1778) is the most widespread Microtus species. It has two forms - the European arvalis form (2n: 46, NF: 84) and the Asian obscurus form (2n: 46, NF: 72). The present study aimed to clarify the taxonomic status of M. arvalis populations distributed in Eastern Turkey, Europe and Asia by analysing two mitochondrial (CYTB and COX1) and one nuclear (IRBP) markers. Phylogenetic dendrograms (median-joining networks and Bayesian trees) constructed using the mitochondrial markers clearly separated the Anatolian population from the European and Asian populations. Contrarily, any explicit differentiation was not shown in IRBP analyses. …

Status And Distribution Of The Striped Hyaena, Hyaena Hyaena, In Turkey: An Updatedassessment (Carnivora: Mammalia), Mühsi̇n Çoğal, Yasi̇n İlemi̇n, Mustafa Sözen

Turkish Journal of Zoology

The Striped Hyaena, Hyaena hyaena, extends its distribution in the north into Turkey, where it has always been rare. In a status assessment conducted by Kasparek et al. in 2004, it was shown that the species is at the brink of extinction. We compiled information from different sources including a press survey and camera trapping in different parts of the country. The situation has even deteriorated since then. The population has strongly decreased, in particular, in the Marmara and Mediterranean regions, and presently the species survives in Western Anatolia only in some small relict populations in Manisa, İzmir, Muğla, and …

Diversity Of Bats In Three Selected Forest Types In Peninsular Malaysia, Nursyereen Mohd Nasir, Dzulhelmi Muhammad Nasir, Rosli Ramli

Turkish Journal of Zoology

Bats, occupying a variety of habitats, play important roles in the tropical forest. Through this study, comparisons on bat species richness and evenness in primary forest, secondary forest, and urban forest were made. Sampling was conducted between 18:30 PM and 06:30 AM using 10 mist-nets and four harp traps for three consecutive nights at the primary and secondary forest of Ulu Gombak Forest Reserve and urban forest in the Universiti Malaya Botanical Garden. This study progressed from February 2012 until April 2014. A total number of 1226 individuals representing 46 species were managed to be captured throughout the period of …

First Report Of The Chilli Thrips, Scirtothrips Dorsalis Hood, 1919 (Thysanoptera:Thripidae) In Turkey, Ekrem Atakan, Serkan Pehli̇van

Turkish Journal of Zoology

The chilli thrips, Scirtothrips dorsalis Hood, 1919 (Thysanoptera: Thripidae) was reported for the first time in Adana Province, Turkey in October, 2020 on blueberries [Vaccinium myrtillus L. (Ericaceae)]. Its heavy infestation was detected on the vegetative parts of the blueberries. In this short communication, a brief summary of its diagnosis and damage as well as its economic importance in the region is provided.