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Copper Dependent Inhibitors Subvert Common Resistance Mechanisms In Staphylococcus Aureus And Inhibit Crucial Metabolic Pathways, Cameron Crawford
Copper Dependent Inhibitors Subvert Common Resistance Mechanisms In Staphylococcus Aureus And Inhibit Crucial Metabolic Pathways, Cameron Crawford
All ETDs from UAB
The effective antibiotic pool is shrinking with antibiotic resistance a constant problem that threatens to make our current therapies obsolete. To combat this, new drug screening methodologies are required since the traditional drug screens are offering limited results or only improvements upon current treatments. This work expands upon the idea that transition metal toxicity can be preferentially targeted towards bacteria. Specifically, the focus is on copper dependent inhibitors that quickly work to eliminate Staphylococcus aureus. S. aureus is a particularly threatening bacteria with high strain variability, a litany of survival and virulence factors, and multiple drug resistance mechanisms that are …
Quality Of Life, Reading And Accommodation In Children With Low Vision, Dawn Kissner Decarlo
Quality Of Life, Reading And Accommodation In Children With Low Vision, Dawn Kissner Decarlo
All ETDs from UAB
Childhood permanent, uncorrectable vision impairment (VI) is rare, yet it is a public health burden as the impairment lasts a lifetime. Vision impairment describes decreased vision that affects everyday activities. Acuity cut-points commonly used include 20/40, 20/60 or 20/70. Blindness often refers to legal blindness (best corrected visual acuity of 20/200 or worse or a visual field less than 20 degrees). Children with VI often have hereditary conditions such as albinism, optic atrophy and retinal degenerations and are different in many ways than adults with VI. The majority have conditions with onset at or near birth and as a result …
Assessment Of Neuropsychological Outcomes After Traumatic Brain Injury And Association With Early Orientation Performance, Christina Diblasio
Assessment Of Neuropsychological Outcomes After Traumatic Brain Injury And Association With Early Orientation Performance, Christina Diblasio
All ETDs from UAB
Moderate-severe traumatic brain injury (TBI) is a leading cause of permanent disability, and cognition plays a critical role in overall function and life after TBI. Moderate-severe TBI often creates long-term deficits in the domains of attention, processing speed, memory, and executive function. Given the prevalence of cognitive deficits following injury and the debilitating effects these deficits can have on functioning, it is important to monitor cognition directly following injury and across recovery. Routine cognitive assessment is essential in order to identify deficits, track recovery, and better guide rehabilitation and educational efforts. It is also critical to identify accurate and feasible …
Protective Effects Of Thioredoxin Reductase Inhibition In The Murine Lung: The Regulation And Contribution Of Heme Oxygenase-1, Katelyn Louise Dunigan-Russell
Protective Effects Of Thioredoxin Reductase Inhibition In The Murine Lung: The Regulation And Contribution Of Heme Oxygenase-1, Katelyn Louise Dunigan-Russell
All ETDs from UAB
Endogenous antioxidant responses defend the lung against oxygen toxicity. In premature neonates, oxygen toxicity and impaired antioxidant defenses contribute to the development of bronchopulmonary dysplasia (BPD), the leading cause of long-term morbidity among premature infants. In adults, oxygen toxicity and impaired antioxidant defense contributes to the pathogenesis of acute lung injury (ALI). Acute Respiratory Distress Syndrome (ARDS), a severe form of ALI, can cause permeant lung damage and mortality. Our lab has established that pharmacologic thioredoxin reductase-1 (TXNRD1) inhibition attenuates lung injury in murine BPD and ALI models. The protective effects of TXNRD1 inhibition are mediated by the activation of …
Public Participation As Peacebuilding: A New Model For Environmental Justice Communities, Kathryn E. Fagan
Public Participation As Peacebuilding: A New Model For Environmental Justice Communities, Kathryn E. Fagan
All ETDs from UAB
Environmental justice seeks to address the unequal burden of environmental problems experienced by minority and low-income communities and to ensure their meaningful participation in decision-making processes. While there is increasing attention being paid to the unequal distribution, there is a lack of work that focuses explicitly on public participation in an environmental justice context. Environmental problems, in general, are complex and involve a variety of stakeholders, and environmental justice problems are further complicated by the interconnections of structural racism, historical trauma, and damaged relationships. Many of these complexities can be seen in the ongoing efforts at the 35th Avenue Superfund …
Self-Awareness Of Functional Deficits In Older Adults With Mild Cognitive Impairment, Kayla Ann Steward
Self-Awareness Of Functional Deficits In Older Adults With Mild Cognitive Impairment, Kayla Ann Steward
All ETDs from UAB
Performance of instrumental activities of daily living (IADLs) can become compromised in older adults with mild cognitive impairment (MCI). Poor self-awareness of deficits, also known as anosognosia, occurs in a substantial minority of those with MCI and varies in extent depending on the domain examined. This dissertation attempts to explain the inter- and intra-patient variability in anosognosia by examining (1) differences in objective IADL performance and self-awareness of functional difficulties between those with amnestic single- (-ASD) and multi-domain (-AMD) MCI, and by examining (2) the neuropsychological and (3) neuroanatomical correlates of anosognosia for IADLs in older adults across a broad …
Novel Methods For Establishing The Capacity For Nociception And Cognition In The Zebrafish Danio Rerio, Chris Taylor
Novel Methods For Establishing The Capacity For Nociception And Cognition In The Zebrafish Danio Rerio, Chris Taylor
All ETDs from UAB
Here we demonstrate the utility of a zebrafish-based model of nociception to serve as a novel screening tool for analgesic drugs. Zebrafish swimming behavior was measured following administration of various algogens used in rodent research. All compounds reduce distance traveled, thought to be an expression of nociception. Furthermore, we undertook to investigate the contribution of sex and feeding history on the acetic acid-evoked nociceptive response in zebrafish. Data suggest that male fish were more sensitive to pain than females, and that females recovered from pain faster than males. Dietary restriction increased pain sensitivity in zebrafish. We then tested the viability …
Contribution Of Adaptive Immune Responses In Chronic Lung Diseases, Thi Kim Tran-Nguyen
Contribution Of Adaptive Immune Responses In Chronic Lung Diseases, Thi Kim Tran-Nguyen
All ETDs from UAB
Immune dysregulation is a hallmark of various chronic lung diseases such as Chronic Obstructive Pulmonary Diseases (COPD) and Idiopathic Pulmonary Fibrosis (IPF). Previous studies in our lab have shown evidences of autoimmunity such as increases in autoantibodies, abnormal T cell profile, immune complex deposition and the presence of ectopic lymphoid structures in the lung of these patients. This thesis consolidates two separate projects about various aberrant immune responses in these diseases. The first project identified Glucose-Regulated-Protein 78 (GRP78) as the common autoantigen in COPD and characterized how GRP78 autoantibodies may increase COPD mortality via its atherogenic effects. I demonstrated that …
Quantitative Analysis Of Human Blood Serum Using Vibrational Spectroscopy., Hugh Byrne, Franck Bonnier, Jennifer Mcintyre, Drishya Rajan Parachalil
Quantitative Analysis Of Human Blood Serum Using Vibrational Spectroscopy., Hugh Byrne, Franck Bonnier, Jennifer Mcintyre, Drishya Rajan Parachalil
Articles
Analysis of bodily fluids using vibrational spectroscopy has attracted increasing attention in recent years. In particular, infrared spectroscopic screening of blood products, particularly blood serum, for disease diagnostics has been advanced considerably, attracting commercial interests. However, analyses requiring quantification of endogenous constituents or exogenous agents in blood are less well advanced. Recent advances towards this end are reviewed, focussing on infrared and Raman spectroscopic analyses of human blood serum. The importance of spectroscopic analysis in the native aqueous environment is highlighted, and the relative merits of infrared absorption versus Raman spectroscopy are considered, in this context. It is argued that …
An Investigation Into The Application Of Raman Spectroscopy For Cervical Cancer Screening, Damien Traynor
An Investigation Into The Application Of Raman Spectroscopy For Cervical Cancer Screening, Damien Traynor
Doctoral
aman spectroscopy is a powerful tool that has the potential to be, used for cervical cancer screening. It is a label-free, low-cost method providing a biochemical fingerprint of a given sample. The objective of this thesis was to address issues associated with the application of Raman spectroscopy for cervical cancer screening and to demonstrate the potential for triage of HPV positive cases. The first study investigated hormonal effects due to the menstrual cycle, the use of hormone- based contraceptives (HC) and the onset of menopause on Raman spectra of cervical cells and determined if these changes would affect the ability …
Development Of Methodologies For Raman Spectral Analysis Of Human Saliva For Detection Of Oral Cancer, Genecy Calado
Development Of Methodologies For Raman Spectral Analysis Of Human Saliva For Detection Of Oral Cancer, Genecy Calado
Doctoral
Oral cancer is one of the most common malignancies worldwide, with over 350,000 to 400,000 new cases reported each year. Early detection, followed by appropriate treatment, can increase cure rates to 80 or 90%, and greatly improve the quality of life by minimising extensive, debilitating treatments. Usually, the clinical diagnosis of most head and neck neoplasms, including oral cancer, is performed through time-consuming and invasive biopsies followed by histological examination of the excised tissue and may present psychological trauma and risk of infection to patients. In addition, histological grading can be subjective, as it is based on subtle morphological changes. …
(Re)Visions Of The Outre-Mer: Looking At The Male Gaze In Jacques Feyder’S Le Grand Jeu (1934), Barry Nevin
(Re)Visions Of The Outre-Mer: Looking At The Male Gaze In Jacques Feyder’S Le Grand Jeu (1934), Barry Nevin
Articles
Cinéma colonial is regarded by certain scholars as a highly conventionalised and commercialised film practice that grants spectators a sense of control over the potentially threatening colonial Other, and Belgian director Jacques Feyder has been subject to particularly harsh criticism in this regard. This article argues that Feyder’s Le Grand Jeu (1934), which depicts a young legionnaire’s relationship with a cabaret singer who bears an uncanny resemblance to a previous lover who jilted him in Paris, challenges dominant tendencies in portrayals of gender and colonialism in French cinema of the 1930s. Drawing on the relationship between Laura Mulvey’s theorisation of …
Mechanisms Of Virtual Reality To Improve Walking And Reaching Behavior In Individuals With Chronic Low Back Pain, Rebecca Hennessy
Mechanisms Of Virtual Reality To Improve Walking And Reaching Behavior In Individuals With Chronic Low Back Pain, Rebecca Hennessy
All ETDs from UAB
Chronic low back pain (cLBP), low back pain persisting longer than three to six months, is a prevalent condition that can greatly interfere with movement quality. Specifically, cLBP can result in slower walking speeds and negatively affect reaching movements. Virtual reality (VR) encompasses a variety of technologies which may potentially improve therapeutic interventions for individuals with cLBP by presenting users with fun, distracting, and engaging challenges that align with their rehabilitative goals. While VR systems have become more accessible to everyday users, there is limited research which specifically examines VR mechanisms to improve walking and reaching quality. This dissertation presents …
Examining The Role Of Neighborhood Quality On The Association Of Mammography Adherence Among Racial/Ethnic Groups, Roman Johnson
Examining The Role Of Neighborhood Quality On The Association Of Mammography Adherence Among Racial/Ethnic Groups, Roman Johnson
All ETDs from UAB
Although several racial/ethnic minority women groups (e.g., Latina, Black, Asian-American, and Native-American women) have lower breast cancer incidence than white women, they are more likely to die from breast cancer. One possible explanation for this discrepancy is racial/ethnic differences in mammography use. Mammography has been shown to contribute to the discovery of tumor proliferation earlier which translates to less breast cancer complications like greater risk of breast cancer-related mortality. Previous studies on racial/ethnic differences in mammography adherence (e.g., annual and biannual mammography adherence) have been inconclusive, and they generally overlook important contextual factors, namely neighborhood quality and geographic location (e.g., …
Evolution Of Growth Rates And Interspecies Interactions Of Prochlorococcus And Alteromonas Under Ocean Acidification Conditions, Matthew Kuhl
All ETDs from UAB
Prochlorococcus is an unusually small and numerous genus of marine cyanobacteria which is thought to contribute 8.5% of marine primary production. Prochlorococcus lacks a gene for catalase, resulting in significant sensitivity to stress from reactive oxygen species (ROS), particularly hydrogen peroxide. Prochlorococcus is known to rely on other species of microbes in the ocean to degrade ROS, such as Alteromonas, a heterotrophic “helper” bacterium with which it is frequently co-located. However, it has been observed that Y2100 predicted ocean acidification conditions (800 ppm atmospheric CO2) reduce catalase production by Alteromonas strain EZ55, increasing oxidative stress on Prochlorococcus strain MIT 9312. …
Incorporating Spatial Structure Into Bayesian Variable Selection Using Spike-And-Slab Priors With Application To Imaging Data, Justin Leach
Incorporating Spatial Structure Into Bayesian Variable Selection Using Spike-And-Slab Priors With Application To Imaging Data, Justin Leach
All ETDs from UAB
Many applications in neuroscience, psychology, medicine, and public health require collecting and analyzing imaging data. While fine resolution images may appear continuous to the naked eye, they are in fact made up of measurements at discrete locations, either pixels in 2D or voxels in 3D. These data may be treated as the scientific outcomes of interest, or as predictors of outcomes of interest. Here, the concern is with the latter situation, which involves converting images into formats amenable to a linear modeling framework; i.e., each subject’s image is converted into a vector, and used to model the subject’s (scalar) outcome …
The Retention Of Zirconia Crowns Luted With Resin And Rmgi Cements And The Effect Of Salivary Contamination, Stephen Liu
The Retention Of Zirconia Crowns Luted With Resin And Rmgi Cements And The Effect Of Salivary Contamination, Stephen Liu
All ETDs from UAB
Purpose: To measure retention of zirconia crowns bonded with resin and RMGI cements and the effect of salivary contamination following 10,000 cycles of thermocycling. Materials and Methods: 64 extracted human mandibular premolars were divided into eight groups (n = 8/group). The specimens in each group were prepared for Katana HT zirconia (eight groups) and one of four luting cements (one for each group): 3M ESPE RelyX Luting Plus RMGI, 3M ESPE Rely X Unicem 2 self-adhesive, Kuraray Panavia SA Universal self-adhesive, and 3M ESPE RelyX Ultimate dual cure resin cement with Scotchbond Universal. The roots of the selected teeth were …
Gp44, A Minor Protein With A Major Role In Bacteriophage 80Α Infection, Keith Allen Manning
Gp44, A Minor Protein With A Major Role In Bacteriophage 80Α Infection, Keith Allen Manning
All ETDs from UAB
Bacteriophage 80α is a temperate double-stranded DNA phage that infects Staphylococcus aureus and is capable of mobilizing a variety of mobile genetic elements named S. aureus Pathogenicity Islands. The capsid of the mature virion is composed of subunits of the capsid protein, portal protein, and a minor capsid protein gp44 as well as packaged phage genomic DNA. The loss of the gp44 protein completely eliminates the phage titer of 80α but does not eliminate the transduction of the pathogenicity islands. In this dissertation, I show that the minor capsid protein is primarily active in a post-ejection role. Without gp44 the …
Life-Space And Cognitive Function By Cardiovascular Disease Risk: A Cross-Sectional Analysis From The Regards Study, Emiri Matsuda
Life-Space And Cognitive Function By Cardiovascular Disease Risk: A Cross-Sectional Analysis From The Regards Study, Emiri Matsuda
All ETDs from UAB
Performance on mobility assessments has been extensively linked to processing speed and executive function among older adults. However, less is known about the relationship between cognitive function and functional mobility as part of day to day life. African American individuals are at higher risk of cardiovascular complications, functional mobility, and cognitive decline compared to Whites. In addition, cardiovas-cular disease risk factors and neuropathology have been linked to impairment in several domains of cognitive function, including processing speed. The current study examined the cross-sectional association between life-space and cognitive function, specifically performance on the Digit Symbol Substitution Test (DSST), a measure …
An Examination Of Welding Inputs And Outputs For The High Frequency Welding Of Steel Pipe, Lindsey Mccall
An Examination Of Welding Inputs And Outputs For The High Frequency Welding Of Steel Pipe, Lindsey Mccall
All ETDs from UAB
Oil and natural gas touch the lives of most people around the world each day in one way or another. As the demand for these products has risen, so has the need for more pipelines. The pipelines that transport oil and natural gas must meet a strict set of criteria to ensure safety. These criteria include mechanical properties and nondestructive testing requirements. The purpose of this study was to determine how to correlate welding inputs and outputs to weld quality, specifically the occurrence of welding discontinuities that are detrimental to the pipe and mechanical properties. The three conclusions of this …
An Augmented Framework For Validating Neural Network Predictions Based On Statistical Modeling, William Stonewall Monroe
An Augmented Framework For Validating Neural Network Predictions Based On Statistical Modeling, William Stonewall Monroe
All ETDs from UAB
The Parkinson's Progression Markers Initiative (PPMI) dataset (which includes several types of imaging datasets) was created to generate biomarkers for diagnosing the presence and severity of Parkinson’s Disease (PD). Unlike some conditions, PD is not intuitively diagnosed directly from brain imaging. As such, it is vital to understand as well as classify PD. Deep learning techniques are becoming increasingly prevalent in medical imaging workflows. In some cases, deep learning outperforms human diagnostic ability. However, the black-box nature of many machine learning models can be troubling, particularly in a medical context since the results could imply alternate treatments and a human …
Genetic And Immunologic Predictors Of Genital Chlamydia Reinfection In African American Women Using Bayesian Hierarchical Models, Kristin Olson
Genetic And Immunologic Predictors Of Genital Chlamydia Reinfection In African American Women Using Bayesian Hierarchical Models, Kristin Olson
All ETDs from UAB
Chlamydia trachomatis (CT) infection is the most common sexually transmitted infec-tion. The burden is greatest in young, African American women. CT reinfections are common and increase risk for reproductive morbidity. Why some women are more sus-ceptible to reinfection is not well understood. Emerging evidence suggests immunologic and genetic variants may predict reinfection susceptibility. The primary goal of this dissertation is to evaluate immunologic and genetic vari-ants as predictors of CT reinfection in young, African American women using different modeling approaches, which has never been reported previously. To evaluate a much larger number of potential predictors than our sample size (a …
Disease Specific Dysregulation Of Stat1 And Stat5 Activation In Mature Cd4+ And Cd8+ T Cells Influences Enhanced Kinetic Responses And Inflammation In Patients With Treatment-Naïve Relapsing Remitting Multiple Sclerosis (Rrms), Brandon Jay Pope
All ETDs from UAB
Autoimmunity is propagated through the lack of effective mechanisms of central and peripheral tolerance. In relapsing remitting multiple sclerosis (RRMS), dysregulated adaptive immune cells have been shown to contribute to disease morbidity through the influence of immune-modulating cytokines in the peripheral blood. Interleukin-2 (IL-2) is a cytokine with several key functions in regulating homeostatic mechanisms within the human immune system. Interferon gamma (IFNγ) is a type II interferon that is needed for an effective response to intracellular bacteria infection through the actions of Th1 cells. IL-2 and IFNγ signaling occurs primarily through signal transducer and activator of transcription (STAT) activation. …
Novel Hiv Adaptation Strategy Against Host Cd8 T Cell Immunity, Kai Qin
Novel Hiv Adaptation Strategy Against Host Cd8 T Cell Immunity, Kai Qin
All ETDs from UAB
Since the 1980s, HIV infection has caused millions of death and tremendous economic losses worldwide. Despite great scientific advances, the only effective therapy to date, antiretroviral therapy (ART), merely delays disease progression yet cannot eradicate viral infection. Therefore, an effective HIV vaccine that can prevent the acquisition of infection would be a desirable alternative. The critical role of CD8 T-cell immunity in HIV infection has been well documented and therefore not surprisingly a great deal of effort has been focused on developing an effective CD8 T-cell based HIV vaccine. However, by far, such CD8 T-cell based HIV vaccine trials have …
Novel Methods For Image Analysis To Evaluate Relationships Between Biomarkers In Alzheimer's Disease, Fabio Raman
Novel Methods For Image Analysis To Evaluate Relationships Between Biomarkers In Alzheimer's Disease, Fabio Raman
All ETDs from UAB
Neuroimaging biomarkers, including pathological amyloid and tau measured with positron emission tomography (PET) and neurodegeneration measured with magnetic res-onance (MR), are part of the research framework for Alzheimer’s disease (AD). Abnormal brain amyloid is currently the earliest established phenotypic marker of AD, and other imaging biomarkers such as tau-PET become abnormal later in the progression of AD pathophysiology. The ability to measure amyloid and predict both tau status and cogni-tion using a single amyloid-PET study through a method readily employed in both re-search and clinical settings would provide a valuable tool in assessing AD. The first goal of this dissertation …
Investigating The Roles Of The Renal Primary Cilium Through The Use Of Intravital Imaging, Dustin Zachary Revell
Investigating The Roles Of The Renal Primary Cilium Through The Use Of Intravital Imaging, Dustin Zachary Revell
All ETDs from UAB
Primary cilia are small microtubule based appendages present on nearly every cell type in the mammalian body, and are highly conserved from organisms as simple as algae to humans. Cilia function as complex signaling centers integrating a variety of pathways and play critical roles throughout development and in maintaining homeostasis. Mutations to ciliary proteins in humans result in a wide array of diseases termed ciliopathies, which have a broad range of symptoms affecting nearly every organ in the body. Renal primary cilia are present on the apical side of tubular epithelium, where they project into the lumen and are thought …
Noninvasive Neuromodulation Using A Benchtop Approach To Mri-Guided Focused Ultrasound Blood Brain Barrier Opening, Megan Rich
All ETDs from UAB
Fundamental neuroscience research has provided a deeper understanding of the genes, molecules and cellular circuitry involved in neurological disorders, however translating discovery into clinical application remains a major challenge. This bench to bedside gap is in part due to the discrepancy in techniques used in the laboratory vs. the clinic for targeting the mechanisms that underlie disease. Ideally this discrepancy would be resolved not only by implementing novel clinical techniques to provide more precise targeting of disease foci, but also by using the same techniques in the clinic that are used at the lab bench to provide a direct bench …
Novel Mechanisms Of Nitric Oxide Activation In The Kidney, Randee Sedaka
Novel Mechanisms Of Nitric Oxide Activation In The Kidney, Randee Sedaka
All ETDs from UAB
Globally, adult sodium consumption has far exceeded daily intake recommendations, leading to one in ten cardiovascular deaths. Given the rise in hypertension prevalence, uncontrolled hypertension with antihypertensive medication use, and significant associations between high salt intake and high blood pressure, there is a need to better understand the mechanisms involved in hypertension. Nitric oxide synthase 1 (NOS1) is a well-established regulator of fluid and electrolyte balance in the renal collecting duct (CD) with highest activity in the inner medulla (IM). We previously reported that high salt (HS) intake stimulates CD endothelin B receptor (ETBR)/NOS1-dependent generation of NO, thereby inhibiting the …
Vehicle-Based Structural Health Monitoring Of Bridges, Zhenhua Shi
Vehicle-Based Structural Health Monitoring Of Bridges, Zhenhua Shi
All ETDs from UAB
Structural health monitoring of bridges serves a critical role in maintaining a safe transportation network. Compared to the traditional resource-consuming direct approaches which usually require labor-intensive inspection and deployment of multiple sensors directly on the bridge, the indirect approach has been gained more and more attention due to its mobility and potential economy characteristics. The indirect approach utilizes the dynamic responses from the vehicle that interacts with the bridge so that the health status of the monitored bridges can be timely and effectively reflected via their structural dynamic characteristics such as frequencies, mode shapes, and damping properties. This research explores …
Mitochondrial Priming Of Tumor Initiating Cells Involves Repression Of Mitochondrial Fission Activity Towards Redox Regulation Of The Cell Cycle Regulator Cyclin E, Brian Spurlock
All ETDs from UAB
Mitochondrial dynamics primarily refers to the opposing fission or fusion events between individual mitochondria, which maintains steady-state mitochondrial morphology in cells. Fission and fusion activities maintain the energetics of normal and neoplastic stem cells. We developed the novel approach mito-SinCe2 to study the bidirectional relationship between mitochondrial dynamics and energetics. Application of this method led to the hypothesis that mitochondria-dependent ovarian tumor initiating cells interconvert between 3 states with distinct mitochondrial energetics/dynamics relationships. Cells in one state, characterized by high mitochondrial ROS and low fission activity, appear to be primed for self-renewal by mitochondria. We call these cells mitochondria-primed stem …