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2019

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Life In Phases: Intra- And Inter- Molecular Phase Transitions In Protein Solutions, Vladimir N. Uversky, Alexey V. Finkelstein Jan 2019

Life In Phases: Intra- And Inter- Molecular Phase Transitions In Protein Solutions, Vladimir N. Uversky, Alexey V. Finkelstein

Molecular Medicine Faculty Publications

Proteins, these evolutionarily-edited biological polymers, are able to undergo intramolecular and intermolecular phase transitions. Spontaneous intramolecular phase transitions define the folding of globular proteins, whereas binding-induced, intra- and inter- molecular phase transitions play a crucial role in the functionality of many intrinsically-disordered proteins. On the other hand, intermolecular phase transitions are the behind-the-scenes players in a diverse set of macrosystemic phenomena taking place in protein solutions, such as new phase nucleation in bulk, on the interface, and on the impurities, protein crystallization, protein aggregation, the formation of amyloid fibrils, and intermolecular liquid–liquid or liquid–gel phase transitions associated with the biogenesis …

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Structural And Dynamical Order Of A Disordered Protein: Molecular Insights Into Conformational Switching Of Page4 At The Systems Level, Xingcheng Lin, Prakash Kulkarni, Federico Bocci, Nicholas P. Schafer, Susmita Roy, Min-Yeh Tsai, Yanan He, Yihong Chen, Krithika Rajagopalan, Steven M. Mooney, Yu Zeng, Keith Weninger, Alex Grishaev, José N. Onuchic, Herbet Levine, Peter G. Wolynes, Ravi Salgia, Govindan Rangarajan, Vladimir N. Uversky, John Orban, Mohit Kumar Jolly Jan 2019

Structural And Dynamical Order Of A Disordered Protein: Molecular Insights Into Conformational Switching Of Page4 At The Systems Level, Xingcheng Lin, Prakash Kulkarni, Federico Bocci, Nicholas P. Schafer, Susmita Roy, Min-Yeh Tsai, Yanan He, Yihong Chen, Krithika Rajagopalan, Steven M. Mooney, Yu Zeng, Keith Weninger, Alex Grishaev, José N. Onuchic, Herbet Levine, Peter G. Wolynes, Ravi Salgia, Govindan Rangarajan, Vladimir N. Uversky, John Orban, Mohit Kumar Jolly

Molecular Medicine Faculty Publications

Folded proteins show a high degree of structural order and undergo (fairly constrained) collective motions related to their functions. On the other hand, intrinsically disordered proteins (IDPs), while lacking a well-defined three-dimensional structure, do exhibit some structural and dynamical ordering, but are less constrained in their motions than folded proteins. The larger structural plasticity of IDPs emphasizes the importance of entropically driven motions. Many IDPs undergo function-related disorder-to-order transitions driven by their interaction with specific binding partners. As experimental techniques become more sensitive and become better integrated with computational simulations, we are beginning to see how the modest structural ordering …

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Intrinsic Disorder Of The Baf Complex: Roles In Chromatin Remodeling And Disease Development, Nashwa El Hadidy, Vladimir N. Uversky Jan 2019

Intrinsic Disorder Of The Baf Complex: Roles In Chromatin Remodeling And Disease Development, Nashwa El Hadidy, Vladimir N. Uversky

Molecular Medicine Faculty Publications

The two-meter-long DNA is compressed into chromatin in the nucleus of every cell, which serves as a significant barrier to transcription. Therefore, for processes such as replication and transcription to occur, the highly compacted chromatin must be relaxed, and the processes required for chromatin reorganization for the aim of replication or transcription are controlled by ATP-dependent nucleosome remodelers. One of the most highly studied remodelers of this kind is the BRG1- or BRM-associated factor complex (BAF complex, also known as SWItch/sucrose non-fermentable (SWI/SNF) complex), which is crucial for the regulation of gene expression and differentiation in eukaryotes. Chromatin remodeling complex …

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Experimental Insight Into The Structural And Functional Roles Of The ‘Black’ And ‘Gray’ Clusters In Recoverin, A Calcium Binding Protein With Four Ef-Hand Motifs, Sergei E. Permyakov, Alisa S. Vologzhannikova, Ekaterina L. Nemashkalova, Alexei S. Kazakov, Alexander I. Denesyuk, Konstantin Denessiouk, Viktoriia E. Baksheeva, Andrey A. Zamyatnin Jr., Eugene Yu. Zernii, Vladimir N. Uversky, Eugene A. Permyakov Jan 2019

Experimental Insight Into The Structural And Functional Roles Of The ‘Black’ And ‘Gray’ Clusters In Recoverin, A Calcium Binding Protein With Four Ef-Hand Motifs, Sergei E. Permyakov, Alisa S. Vologzhannikova, Ekaterina L. Nemashkalova, Alexei S. Kazakov, Alexander I. Denesyuk, Konstantin Denessiouk, Viktoriia E. Baksheeva, Andrey A. Zamyatnin Jr., Eugene Yu. Zernii, Vladimir N. Uversky, Eugene A. Permyakov

Molecular Medicine Faculty Publications

Recently, we have found that calcium binding proteins of the EF-hand superfamily (i.e., a large family of proteins containing helix-loop-helix calcium binding motif or EF-hand) contain two types of conserved clusters called cluster I (‘black’ cluster) and cluster II (‘grey’ cluster), which provide a supporting scaffold for the Ca2+ binding loops and contribute to the hydrophobic core of the EF-hand domains. Cluster I is more conservative and mostly incorporates aromatic amino acids, whereas cluster II includes a mix of aromatic, hydrophobic, and polar amino acids of different sizes. Recoverin is EF-hand Ca2+-binding protein containing two ‘black’ clusters comprised of F35, …

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Many-To-One Binding By Intrinsically Disordered Protein Regions, Wei-Lun Alterovitz, Eshel Faraggi, Christopher J. Oldfield, Jingwei Meng, Bin Xue, Fei Huang, Pedro Romero, Andrzej Kloczkowski, Vladimir N. Uversky, A. Keith Dunker Jan 2019

Many-To-One Binding By Intrinsically Disordered Protein Regions, Wei-Lun Alterovitz, Eshel Faraggi, Christopher J. Oldfield, Jingwei Meng, Bin Xue, Fei Huang, Pedro Romero, Andrzej Kloczkowski, Vladimir N. Uversky, A. Keith Dunker

Molecular Medicine Faculty Publications

Disordered binding regions (DBRs), which are embedded within intrinsically disordered proteins or regions (IDPs or IDRs), enable IDPs or IDRs to mediate multiple protein-protein interactions. DBR-protein complexes were collected from the Protein Data Bank for which two or more DBRs having different amino acid sequences bind to the same (100% sequence identical) globular protein partner, a type of interaction herein called many-to-one binding. Two distinct binding profiles were identified: independent and overlapping. For the overlapping binding profiles, the distinct DBRs interact by means of almost identical binding sites (herein called “similar”), or the binding sites contain both common and divergent …

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Hiv Vaccine Mystery And Viral Shell Disorder, Gerard Kian-Meng Goh, A. Keith Dunker, James A. Foster, Vladimir N. Uversky Jan 2019

Hiv Vaccine Mystery And Viral Shell Disorder, Gerard Kian-Meng Goh, A. Keith Dunker, James A. Foster, Vladimir N. Uversky

Molecular Medicine Faculty Publications

Hundreds of billions of dollars have been spent for over three decades in the search for an effective human immunodeficiency virus (HIV) vaccine with no success. There are also at least two other sexually transmitted viruses, for which no vaccine is available, the herpes simplex virus (HSV) and the hepatitis C virus (HCV). Traditional textbook explanatory paradigm of rapid mutation of retroviruses cannot adequately address the unavailability of vaccine for many sexually transmissible viruses, since HSV and HCV are DNA and non-retroviral RNA viruses, respectively, whereas effective vaccine for the horsefly-transmitted retroviral cousin of HIV, equine infectious anemia virus (EIAV), …

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Intrinsically Disordered Proteins In Chronic Diseases, Prakash Kulkarni, Vladimir N. Uversky Jan 2019

Intrinsically Disordered Proteins In Chronic Diseases, Prakash Kulkarni, Vladimir N. Uversky

Molecular Medicine Faculty Publications

No abstract provided.

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2019 Accountability Plan System, Usf Jan 2019

2019 Accountability Plan System, Usf

USF Accountability Reports

No abstract provided.

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Curriculum Change 2019-2020, Portland State University Jan 2019

Curriculum Change 2019-2020, Portland State University

Bulletin & Curriculum Change Documents

No abstract provided.

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Postures In Mobile Device Usage: Effects On Interpretation Bias, Mood, And Physical Tension, Gabriela Flores-Cruz Jan 2019

Postures In Mobile Device Usage: Effects On Interpretation Bias, Mood, And Physical Tension, Gabriela Flores-Cruz

Honors Undergraduate Theses

Past research has shown that there is a relationship between body posture and cognitive processes. However, postures used with technological devices has not been studied more extensively. The purpose of this study was to examine posture effects when using a mobile device on interpretation bias, mood, and physical tension. Each participant was randomly assigned one of three conditions: sitting slumped, sitting upright, or lying down. Participants were asked to complete the Scrambled Sentences Task (SST), a task of unscrambling emotional and neutral sentences, to measure their interpretation bias. Additional questions were asked to measure the participant's physical tension and mood. …

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Studies On The Potential Regulation Of Usp30 By Omi/Htra2 Protease, Sunmi Jin Jan 2019

Studies On The Potential Regulation Of Usp30 By Omi/Htra2 Protease, Sunmi Jin

Honors Undergraduate Theses

The intent of this thesis is to determine whether the deubiquitinating enzyme ubiquitin specific protease 30 (USP30) is cleaved by Omi/HtrA2 (hereafter referred to as Omi) protease during mitochondrial stress. USP30 is a mitochondrial protein that is anchored in the outer mitochondrial membrane and has components in the intermembrane space (IMS) as well as in the cytoplasm. USP30's IMS component has a six-amino-acid sequence that is very similar to Omi's consensus cleavage sites. Under normal conditions, Omi resides exclusively within the IMS; therefore, if Omi were to cleave USP30, it would target the part of the protein located in the …

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The Role Of Cues And Kinematics On Social Event Perception, Estefania Berrios Jan 2019

The Role Of Cues And Kinematics On Social Event Perception, Estefania Berrios

Honors Undergraduate Theses

The belief that intentions are hidden away in the minds of individuals has been circulating for many years. Theories of indirect perception, such as the Theory of Mind, have since been developed to help explain this phenomenon. Conversely, research in the field of human kinematics and event perception have also given rise to theories of direct perception. The purpose of the study was to determine if intentionality can be directly perceived rather than requiring inferential processes. Prior research regarding kinematics of cooperative and competitive movements have pointed toward direct perception, demonstrating participants can accurately judge a movement as cooperative or …

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Role Of T-Bet In Production Of Immunoglobulin Isotypes In An Influenza Setting, David Sidhom Jan 2019

Role Of T-Bet In Production Of Immunoglobulin Isotypes In An Influenza Setting, David Sidhom

Honors Undergraduate Theses

Influenza is one of the most common diseases worldwide, yet the vaccines against influenza are only 35% effective at protecting against infection. Creating a more effective vaccine requires an understanding of the foundation and the factors that contribute to a strong and protective adaptive immune response. T-bet [TBX21] is a transcription factor that plays an instrumental role in the orchestration of the type 1 immune response, which is the specialized response used by the immune system for a cell-mediated response against intracellular pathogens, such as influenza. It has yet to be explored in an influenza setting on the role T-bet …

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The Effects Of Zinc Nanofertilizers On Tomato Plants, Ketsira Pierre Jan 2019

The Effects Of Zinc Nanofertilizers On Tomato Plants, Ketsira Pierre

Honors Undergraduate Theses

Farmers around the world aim to use soil with adequate nutrients to produce sufficient and quality crops to the world's ever-growing population. Unbalanced use of nutrients in the soil will lead to soil deficiency, which is usually seen in South and Southeast Asian countries. This soil deficiency is often due to loss of micronutrient(s) within the soil from farming practices. Micronutrient deficiency affects not only plant growth but human health. Plants grown in nutrient deficient soil produce food with nutrient deficiencies, which affect people dependent on these foods for nutrients (Kathmandu, 2004). Nutrient deficient diseases and disorders like malnutrition are …

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Long-Term Outcomes Of Neonatal Herpes Simplex Virus Infection And Treatment, Genesis M. Brador Jan 2019

Long-Term Outcomes Of Neonatal Herpes Simplex Virus Infection And Treatment, Genesis M. Brador

Honors Undergraduate Theses

The prevalence of herpes simplex virus (HSV) infection globally is high, and although there is no cure for it, the antiviral drug acyclovir is used to alleviate symptoms. There are two types of HSV: HSV-1, which typically infects the oral area, and HSV-2, which is associated with genital infections. A mother who carries the infection may transmit it to a neonate in different ways, most commonly via vaginal delivery in the presence of active lesions. There are three types of HSV disease that affect newborns: skin, eyes or mouth (SEM) disease, central nervous system (CNS) disease, or disseminated disease. The …

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Draining Your Brain: The Effects Of Four Fatiguing Task Domains On Executive Function And Prefrontal Cortex, Salim A. Mouloua Jan 2019

Draining Your Brain: The Effects Of Four Fatiguing Task Domains On Executive Function And Prefrontal Cortex, Salim A. Mouloua

Honors Undergraduate Theses

The present study empirically examined the effects of four fatiguing task domains on executive function through participants' reaction time, accuracy, and brain activity in prefrontal cortex (PFC). Forty college-age participants were collected (16 males and 24 females), of which eleven were examined using a functional near-infrared spectroscopy (fNIRS) imaging system. The present study used a 4×2 mixed factorial design consisting of fatiguing task (arm contractions task, vigilance task, distance-manipulated Fitts' task, size-manipulated Fitts' task) as a between-participant variable and n-back testing period (pre-test versus post-test 3-back task) as a within-participant variable. Results indicated significant increases in 3-back performance after …

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The Performance Of Racialized Bodies And Brecht’S Operatic Anthropology, Kevin S. Amidon Ph.D. Jan 2019

The Performance Of Racialized Bodies And Brecht’S Operatic Anthropology, Kevin S. Amidon Ph.D.

Modern Languages Faculty Publications

Taxonomic tropes and themes, particularly gender and class, but also race, function together in Brecht’s plays to create overdetermined characterizations. Parallel to these characterizations, he developed a multilayered theory of performance that emphasizes how those who enact text should approach the representation of diverse human types and groups. His encounter with Chinese acting established foundational elements in this theory. In parallel to his theoretical thinking about performance and race in the mid-1930s, Brecht was developing his stance toward operatic representation. While these two conceptual spheres, race and opera, might appear far apart in their content, they parallel each other closely …

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Concerning Wholesale Importation Of Prescription Pharmaceutical Products From Canada For Resale To Colorado Residents, And, In Connection Therewith, Making An Appropriation., Colorado General Assembly Jan 2019

Concerning Wholesale Importation Of Prescription Pharmaceutical Products From Canada For Resale To Colorado Residents, And, In Connection Therewith, Making An Appropriation., Colorado General Assembly

Session Laws 2001-Present

No abstract provided.

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Characterizing Freshwater Phytoplankton Dynamics With Electro-Optical Remote Sensing, Michael Sayers Jan 2019

Characterizing Freshwater Phytoplankton Dynamics With Electro-Optical Remote Sensing, Michael Sayers

Dissertations, Master's Theses and Master's Reports

Freshwater lakes are an important component contributing to ecosystem health and biodiversity on local, regional, and global scales. And while lakes only represent <5% of the global surface area, they are often very productive systems which contribute significantly to carbon cycling dynamics and freshwater fish production on a number of spatial scales. Due to the remote location and sheer size of some of these lakes it has proven difficult to adequately document changes in water quality. Significant challenges exist to adequately monitor water quality, and in particular phytoplankton dynamics, over large spatial and temporal scales using traditional in situ methods. Satellite electro-optical remote sensing offers a potential tool to provide better characterization of phytoplankton dynamics for a variety of freshwater systems. This work resulted in an approach to quantify global summer phytoplankton abundance using a newly developed remote sensing derived chlorophyll-a product. This product was also used in conjunction with a newly created carbon fixation model to assess global freshwater phytoplankton production which provided new insights into the role freshwater systems play in the …

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Effects Of Diet Quality And Temperature On Stable Fly (Diptera: Muscidae) Development, Melina Florez-Cuadros, Dennis Berkebile, Gary Brewer Jan 2019

Effects Of Diet Quality And Temperature On Stable Fly (Diptera: Muscidae) Development, Melina Florez-Cuadros, Dennis Berkebile, Gary Brewer

Department of Entomology: Faculty Publications

The effects of diet quality and temperature on the development time and size of stable flies, Stomoxys calcitrans (L.), was evaluated. Both development time and size varied relative to diet quality and temperature, and their effects were additive. Diet quality and temperature made similar contributions to the variance in size whereas temperature was responsible for >97% of the variance in development time. Regression analysis predicted the shortest development time, egg to adult, to be 12.7 days at 32 ◦C and 70% nutrients. Egg to adult development varied curvilinearly relative to diet quality and temperature on the degree day 10 …

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Nutritional Status Of Honey Bee (Apis Mellifera L.) Workers Across An Agricultural Land-Use Gradient, Matthew D. Smart, Clint R. V. Otto, Jonathan G. Lundgren Jan 2019

Nutritional Status Of Honey Bee (Apis Mellifera L.) Workers Across An Agricultural Land-Use Gradient, Matthew D. Smart, Clint R. V. Otto, Jonathan G. Lundgren

Department of Entomology: Faculty Publications

Land use, habitat, and forage quality have emerged as critical factors influencing the health, productivity, and survival of honey bee colonies. However, characterization of the mechanistic relationship between differential land-use conditions and ultimate outcomes for honey bee colonies has been elusive. We assessed the physiological health of individual worker honey bees in colonies stationed across a gradient of agricultural land use to ask whether indicators of nutritional physiology including glycogen, total sugar, lipids, and protein were associated with land-use conditions over the growing season and colony population size the subsequent spring during almond pollination. Across the observed land-use gradient, we …

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Assessing Variation In Us Soybean Seed Composition (Protein And Oil), Yared Assefa, Larry C. Purcell, Montse Salmeron, Seth Naeve, Shaun N. Casteel, Peter Kovacs, Sotirios Archontoulis, Mark Licht, Fred Below, Herman Kandel, Laura E. Lindsey, John Gaska, Shawn Conley, Charles Shapiro, John M. Orlowski, Bobby R. Golden, Gurpreet Kaur, Maninderpal Singh, Kurt Thelen, Randall Laurenz, Dan Davidson, Igancio A. Ciampitti Jan 2019

Assessing Variation In Us Soybean Seed Composition (Protein And Oil), Yared Assefa, Larry C. Purcell, Montse Salmeron, Seth Naeve, Shaun N. Casteel, Peter Kovacs, Sotirios Archontoulis, Mark Licht, Fred Below, Herman Kandel, Laura E. Lindsey, John Gaska, Shawn Conley, Charles Shapiro, John M. Orlowski, Bobby R. Golden, Gurpreet Kaur, Maninderpal Singh, Kurt Thelen, Randall Laurenz, Dan Davidson, Igancio A. Ciampitti

Department of Agronomy and Horticulture: Faculty Publications

Soybean [Glycine max (L.) Merr.] seed composition and yield are a function of genetics (G), environment (E), and management (M) practices, but contribution of each factor to seed composition and yield are not well understood. The goal of this synthesis-analysis was to identify the main effects of G, E, and M factors on seed composition (protein and oil concentration) and yield. The entire dataset (13,574 data points) consisted of 21 studies conducted across the United States (US) between 2002 and 2017 with varying treatments and all reporting seed yield and composition. Environment (E), defined as site-year, was the dominant …

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Assessing The Value Of Grazed Corn Residue For Crop And Cattle Producers, Daren Redfearn, Jay Parsons, Mary Drewnoski, Marty Schmer, Rob Mitchell, James Macdonald, Jaymelynn Farney, Alexander Smart Jan 2019

Assessing The Value Of Grazed Corn Residue For Crop And Cattle Producers, Daren Redfearn, Jay Parsons, Mary Drewnoski, Marty Schmer, Rob Mitchell, James Macdonald, Jaymelynn Farney, Alexander Smart

Department of Agronomy and Horticulture: Faculty Publications

Integrated crop–livestock systems have included grazing perennial grasses during the spring and summer and corn (Zea mays L.) residues during the winter. Our objectives were to identify opportunities for expanded corn residue use through grazing and provide an economic assessment for value-added grazing. We estimated the economic value to the crop sector through grazing leased corn residue at over $95 million for Nebraska, South Dakota, Kansas, and North Dakota under current management. Additionally, gross economic value to the livestock sector in these states was estimated at greater than $191 million. Advantages for increased grazing use of corn residue include …

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Climate-Smart Practices For Improvement Of Crop Yields In Mid-Hills Of Nepal, Roshan Subedi, Laxmi Dutt Bhatta, Erica Udas, Nand Kishor Agrawal, Keshab Datta Joshi, Dinesh Panday Jan 2019

Climate-Smart Practices For Improvement Of Crop Yields In Mid-Hills Of Nepal, Roshan Subedi, Laxmi Dutt Bhatta, Erica Udas, Nand Kishor Agrawal, Keshab Datta Joshi, Dinesh Panday

Department of Agronomy and Horticulture: Faculty Publications

Farming in Nepal mostly represents the hill farming system with the dominance of small-holder farmers. In recent days, farmers in the country are impacted by climate change. Events of surface runoff, landslides, and soil erosions, along with changes in rainfall pattern and intensity have elevated a decline in crop productivity and soil fertility. Considering the situation, a pilot project on Resilient Mountain Village was implemented in Kavrepalanchowk district of Nepal from 2014–2016 with a participatory approach to demonstrate climate-smart practices. These practices include the application of locally prepared bio-fertilizer (named as “jholmal”), green manuring in rice (Oryza sativa L.) …

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Drought Stress Tolerance In Wheat And Barley: Advances In Physiology, Breeding And Genetics Research, Ahmed Sallam, Ahmad M. Alqudah, Mona F. A. Dawood, P. Stephen Baenziger, Andreas Borner Jan 2019

Drought Stress Tolerance In Wheat And Barley: Advances In Physiology, Breeding And Genetics Research, Ahmed Sallam, Ahmad M. Alqudah, Mona F. A. Dawood, P. Stephen Baenziger, Andreas Borner

Department of Agronomy and Horticulture: Faculty Publications

Climate change is a major threat to most of the agricultural crops grown in tropical and sub-tropical areas globally. Drought stress is one of the consequences of climate change that has a negative impact on crop growth and yield. In the past, many simulation models were proposed to predict climate change and drought occurrences, and it is extremely important to improve essential crops to meet the challenges of drought stress which limits crop productivity and production. Wheat and barley are among the most common and widely used crops due to their economic and social values. Many parts of the world …

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Generating High Density, Low Cost Genotype Data In Soybean [Glycine Max (L.) Merr.], Mary M. Happ, Haichuan Wang, George L. Graef, David L. Hyten Jan 2019

Generating High Density, Low Cost Genotype Data In Soybean [Glycine Max (L.) Merr.], Mary M. Happ, Haichuan Wang, George L. Graef, David L. Hyten

Department of Agronomy and Horticulture: Faculty Publications

Obtaining genome-wide genotype information for millions of SNPs in soybean [Glycine max (L.) Merr.] often involves completely resequencing a line at 5X or greater coverage. Currently, hundreds of soybean lines have been resequenced at high depth levels with their data deposited in the NCBI Short Read Archive. This publicly available dataset may be leveraged as an imputation reference panel in combination with skim (low coverage) sequencing of new soybean genotypes to economically obtain high-density SNP information. Ninety-nine soybean lines resequenced at an average of 17.1X were used to generate a reference panel, with over 10 million SNPs called using …

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Assessing Precipitation, Evapotranspiration, And Ndvi As Controls Of U.S. Great Plains Plant Production, Maosi Chen, William J. Parton, Melannie D. Hartman, Stephen J. Del Grosso, William K. Smith, Alan K. Knapp, Susan Lutz, Justin D. Derner, Compton J. Tucker, Dennis S. Ojma, Jerry D. Volesky, Mitchell B. Stephenson, Walter H. Schacht, Wei Gao Jan 2019

Assessing Precipitation, Evapotranspiration, And Ndvi As Controls Of U.S. Great Plains Plant Production, Maosi Chen, William J. Parton, Melannie D. Hartman, Stephen J. Del Grosso, William K. Smith, Alan K. Knapp, Susan Lutz, Justin D. Derner, Compton J. Tucker, Dennis S. Ojma, Jerry D. Volesky, Mitchell B. Stephenson, Walter H. Schacht, Wei Gao

Department of Agronomy and Horticulture: Faculty Publications

Productivity throughout the North American Great Plains grasslands is generally considered to be water limited, with the strength of this limitation increasing as precipitation decreases. We hypothesize that cumulative actual evapotranspiration water loss (AET) from April to July is the precipitation-related variable most correlated to aboveground net primary production (ANPP) in the U.S. Great Plains (GP). We tested this by evaluating the relationship of ANPP to AET, precipitation, and plant transpiration (Tr). We used multi-year ANPP data from five sites ranging from semiarid grasslands in Colorado and Wyoming to mesic grasslands in Nebraska and Kansas, mean annual NRCS ANPP, and …

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Estimating Percentages Of Fusarium-Damaged Kernels In Hard Wheat By Near-Infrared Hyperspectral Imaging, Stephen R. Delwiche, I. Torres Rodriguez, S. R. Rausch, R. A. Graybosch Jan 2019

Estimating Percentages Of Fusarium-Damaged Kernels In Hard Wheat By Near-Infrared Hyperspectral Imaging, Stephen R. Delwiche, I. Torres Rodriguez, S. R. Rausch, R. A. Graybosch

Department of Agronomy and Horticulture: Faculty Publications

Fusarium head blight (FHB) is among the most common fungal diseases affecting wheat, resulting in decreased yield, low-density kernels, and production of the mycotoxin deoxynivalenol, a compound toxic to humans and livestock. Human visual analysis of representative wheat samples has been the traditional method for FHB assessment in both official inspection and plant breeding operations. While not requiring specialized equipment, visual analysis is dependent on a trained and consistent workforce, such that in the absence of these aspects, biases may arise among inspectors and evaluation dates. This research was intended to avoid such pitfalls by using longer wavelength radiation than …

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Can Ratoon Cropping Improve Resource Use Efficiencies And Profitability Of Rice In Central China?, Shen Yuan, Kenneth G. Cassman, Jianliang Huang, Shaobing Peng, Patricio Grassini Jan 2019

Can Ratoon Cropping Improve Resource Use Efficiencies And Profitability Of Rice In Central China?, Shen Yuan, Kenneth G. Cassman, Jianliang Huang, Shaobing Peng, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Identifying cropping systems with small global warming potential (GWP) per unit of productivity is important to ensure food security while minimizing environmental footprint. During recent decades, double-season rice (DR) systems in central China have progressively shifted into single-crop, middle-season rice (MR) due to high costs and labor requirements of double-season rice. Ratoon rice (RR) has been proposed as an alternative system that reconciliates both high annual productivity and relatively low costs and labor requirements. Here we used onfarm data collected from 240 farmer fields planted with rice in 2016 to evaluate annual energy balance, environmental impact, and net profit of …

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Altruism In The Human Species: A Meta-Ethnography, Josh Tedrow Jan 2019

Altruism In The Human Species: A Meta-Ethnography, Josh Tedrow

CUP Undergraduate Research

The purpose of this meta-ethnography was to explore the theories surrounding human altruistic behavior. I began by selecting a series of empirical and theoretical sources for review. After reading the empirical materials, I summarized empirical studies within categories such as the observed psychological, biological, and social factors associated with altruism. I then reviewed the theoretical literature and established the similar trends in the discussion about the social application of altruism. The trends that I found were reciprocal altruism, the importance of small-group function in facilitating large-group function, and that group function is imperative for a successful future of humanity. After …

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