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2019

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Synthesis And Characterization Of Polycaprolactone-Based Segmented Polyurethanes, Aysun Güney, Aysel Kiziltay, Nesri̇n Hasirci, Tuğba Endoğan Tanir Jan 2019

Synthesis And Characterization Of Polycaprolactone-Based Segmented Polyurethanes, Aysun Güney, Aysel Kiziltay, Nesri̇n Hasirci, Tuğba Endoğan Tanir

Turkish Journal of Chemistry

Segmented polyurethanes were synthesized by the reactions of poly($\varepsilon $-caprolactone) (PCL)-diol and 1,6-hexamethylene diisocyanate through bulk polymerization without using solvent, initiator, or catalyst. Phase separation and hydrogen bond formation between hard segments or between hard and soft segments were examined by Fourier transform infrared spectroscopy (FTIR)-ATR and X-ray diffraction (XRD), while physical and mechanical properties were studied by atomic force microscope, differential scanning calorimeter, dynamic mechanical analysis, and tensile tester. When the diisocyanate content was increased, deconvolution results of FTIR-ATR in C$=$O and N-H regions demonstrated better miscibility of the segments and XRD results showed a significant decrease in the …

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A Fast And Convenient Analysis Method For The Determination Of Cations In Pomegranate Juices By Capillary Electrophoresis With Contactless Conductivity Detection, Veseli̇na Adimcilar, Nevi̇n Özteki̇n Jan 2019

A Fast And Convenient Analysis Method For The Determination Of Cations In Pomegranate Juices By Capillary Electrophoresis With Contactless Conductivity Detection, Veseli̇na Adimcilar, Nevi̇n Özteki̇n

Turkish Journal of Chemistry

Health beneficial effect of pomegranate is mainly due to its confirmed high antioxidant capacity and polyphenolic content. In recent years, experimental and clinical studies have shown that pomegranate intake lowers blood pressure. Potassium and other minerals such as calcium and magnesium may be responsible for this property. In this study, a rapid, economic, reliable, and applicable capillary electrophoresis method was proposed with contactless conductivity detection for the quantitative determination of six cations in different pomegranate juices. The correlation between these cation contents of eight different pomegranate juices was evaluated by using one-way ANOVA and Duncan's multiple-range test. The optimum buffer …

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Pore Length- And Ion Concentration-Dependent Ionic Current In Cylindrical Nanopores: An Atomistic Molecular Dynamics Study, Nazar İleri̇ Ercan Jan 2019

Pore Length- And Ion Concentration-Dependent Ionic Current In Cylindrical Nanopores: An Atomistic Molecular Dynamics Study, Nazar İleri̇ Ercan

Turkish Journal of Chemistry

The sensing of individual molecules as they pass through nanopores under an external field is a popular research field. The approach is simply based on the detectable temporary blockades in the ionic current as the molecules pass through the nanopores. These signatures of the current have been shown to be a function of nanoparticle and nanopore size and geometry as well as the external electric field. However, models developed in this context fail to predict the experimentally observed behavior in technologically important shorter nanopores. Here we present atomistic molecular dynamics simulation results from colloidal nanoparticle translocation through mid-to-low aspect ratio …

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Synthesis, Kinetic Study, And Reaction Mechanism: Nucleophilic Substitution Reactions Of Butyl Methyl Chlorophosphate With Substituted Anilines And Deuterated Substituted Anilines In Acetonitrile, Hasi Rani Barai, Md. Mahbubur Rahman, Sang Woo Joo Jan 2019

Synthesis, Kinetic Study, And Reaction Mechanism: Nucleophilic Substitution Reactions Of Butyl Methyl Chlorophosphate With Substituted Anilines And Deuterated Substituted Anilines In Acetonitrile, Hasi Rani Barai, Md. Mahbubur Rahman, Sang Woo Joo

Turkish Journal of Chemistry

This study demonstrated the kinetics of nucleophilic substitution reactions of butyl methyl chlorophosphate (2) with X-anilines (XC$_{6}$H$_{4}$NH$_{2})$ and deuterated X-anilines (XC$_{6}$H$_{4}$ND$_{2})$ in MeCN at 55.0 \textpm\ 0.1 \textdegree C together with the general optimized method for the synthesis of 2 under mild conditions. Different spectroscopic characterizations revealed the formation of 2 with high purity. The free energy relationship with the substituents X in the anilines exhibited biphasic concavity upwards with a break point at X $=$ H, which induced large negative $\rho_{X}$ and small positive $\beta_{X}$ values. The deuterium kinetic isotope effects (DKIEs) were secondary inverse ($k_{H}$/$k_{D}$ \textless\ 1: 0.702--0.918) …

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Synthesis, Crystal Structure, And Characterization Of Two Heterometallic Transition Metal Citrate Complexes [M $=$ Co(Ii) And Cd(Ii)], Zeki̇ Kartal, Onur Şahi̇n, Abdülkeri̇m Yavuz Jan 2019

Synthesis, Crystal Structure, And Characterization Of Two Heterometallic Transition Metal Citrate Complexes [M $=$ Co(Ii) And Cd(Ii)], Zeki̇ Kartal, Onur Şahi̇n, Abdülkeri̇m Yavuz

Turkish Journal of Chemistry

In this study, two heterometallic transition metal complexes with the formulas [CoK$_{4}(\mu _{10}$-C$_{6}$H$_{5}$O$_{7})_{2}$]$_{n}$ and [CdK($\mu _{8}$-C$_{6}$H$_{5}$O$_{7})(\mu $-H$_{2}$O)(H$_{2}$O)]$_{n}$ were synthesized as crystalline compounds. The structures of\textbf{ }these crystalline metal complexes were characterized by their spectral analyses (FT-IR, FT-Raman, thermal analysis, magnetic properties, and single-crystal X-ray diffraction techniques). According to the spectral data of the new metal complexes obtained, both metal complexes are in the monoclinic crystal system and in the P2$_{1}$/c and P2$_{1}$ space groups, respectively. The asymmetric unit of the metal complex [CoK$_{4}(\mu _{10}$-C$_{6}$H$_{5}$O$_{7})_{2}$]$_{n}$ contains one Co(II) ion, two potassium cations, and one (C$_{6}$H$_{5}$O$_{7})$ citrate ligand, whereas that of the …

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Design, Synthesis, And Evaluation Of The Antimycobacterial Activity Of 3-Mercapto-1,2,4-Triazole--Pyrrole Hybrids, Gheorghe Roman, Andra-Cristina Bostanaru, Valentin Nastasa, Mihai Mares Jan 2019

Design, Synthesis, And Evaluation Of The Antimycobacterial Activity Of 3-Mercapto-1,2,4-Triazole--Pyrrole Hybrids, Gheorghe Roman, Andra-Cristina Bostanaru, Valentin Nastasa, Mihai Mares

Turkish Journal of Chemistry

A series of 3-mercapto-1,2,4-triazole--pyrrole hybrids was designed as antimycobacterial agents by employing 5-(4-(1$H$-pyrrol-1-yl)phenyl)-4$H$-1,2,4-triazole-3-thiol as the scaffold onto which several types of moieties were introduced in the triazole ring at N-4 and N-2 and as substituents of the mercapto function. The aforementioned moieties are an allyl or a phenyl moiety at N-4; an aminomethyl group at N-2; or methyl, substituted benzyl, ethoxycarbonylmethyl, or substituted phenacyl at sulfur. Investigation of the compounds in the resulting library as growth inhibitors of Mycobacterium smegmatis showed that their minimum inhibitory concentration was higher than 64 mg/L.

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Synthesis And Antitumor Activities Of 2-(Piperidin-4-Yl)-Thiazole-4-Carboxamides Analogues Of Tubulysins, Xiangfu Peng, Mingsha Shao, Shuchao Ma, Lei Yao Jan 2019

Synthesis And Antitumor Activities Of 2-(Piperidin-4-Yl)-Thiazole-4-Carboxamides Analogues Of Tubulysins, Xiangfu Peng, Mingsha Shao, Shuchao Ma, Lei Yao

Turkish Journal of Chemistry

}Tubulysins are a family of natural products that exhibit potent antitumor activities, which have attracted much attention from synthetic and medicinal chemists. Previous attempts to aromatize the Tuv part of tubulysin analogues led to a loss in antitumor activity, which suggested that the Ile and Tuv fragments of these analogues were adopting different conformations than the natural products. In this study, a series of 2-(piperidin-4-yl)-thiazole-4-carboxamides have been prepared to investigate whether an intramolecular H-bond between key NH and OH groups is responsible for the conformational control. The antitumor activities of these analogues have been screened using MDA-MB-231-breast, Siha-cervical, MCF7-breast, and …

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A Microwave-Assisted Highly Stereoselective One-Pot Wittig Reaction Under Solvent-Free Conditions, Kalyani Rajkumari, Bittu Lama, Lalthazuala Rokhum Jan 2019

A Microwave-Assisted Highly Stereoselective One-Pot Wittig Reaction Under Solvent-Free Conditions, Kalyani Rajkumari, Bittu Lama, Lalthazuala Rokhum

Turkish Journal of Chemistry

We report a novel microwave-assisted two-step, one-pot protocol for the synthesis of olefins (alkenes) via Wittig reaction. The reaction was carried out under solvent-free conditions using basic alumina both as a heterogeneous catalyst and a solid support. Varieties of aromatic aldehydes were converted into their corresponding olefins within 30-50 min with good to excellent yields. An excellent predominance of E-isomers over Z-isomers (up to 100% E-selectivity) for all the olefin products was observed. This showed the attractive stereocontrol of our reported protocol. In addition, owing to the solid-state nature of the reactions, our procedure prevented the need for tedious aqueous …

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Effect Of Brij 35 And Saponin Surfactants On Adsorption Of Diethylstilbestrol As An Emerging Estrogenic Contaminant By Clinoptilolite In Batch And Fixed-Bed Column Experiments, Reyhaneh Saadi, Reza Fazaeli, Leila Vafajoo, Iraj Naser Jan 2019

Effect Of Brij 35 And Saponin Surfactants On Adsorption Of Diethylstilbestrol As An Emerging Estrogenic Contaminant By Clinoptilolite In Batch And Fixed-Bed Column Experiments, Reyhaneh Saadi, Reza Fazaeli, Leila Vafajoo, Iraj Naser

Turkish Journal of Chemistry

In this study, natural clinoptilolite was modified by saponin and Brij 35 surfactants to remove diethylstilbestrol (DES) from wastewater in batch and continuous systems. The optimum pH, amount of adsorbent, contact time, and temperature were 11, 10 g/L, 12 h, and 35 $^{\circ}$C, respectively, for the process. The equilibrium data agreed well with the Langmuir isotherm for natural clinoptilolite (NC), natural clinoptilolite modified by Brij 35 (NC-Brij), and natural clinoptilolite modified by saponin surfactants (NC-saponin) compared to other isotherms. The maximum adsorption capacities resulting from the Langmuir isotherm for NC, NC-Brij, and NC-saponin were 8.012, 23.64, and 39.525 mg/g, respectively. …

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Protonation Behavior Of Dextran Amino Acid Esters, Konrad Hotzel, Lidjia Fras Zemljic, Matej Bracic, Thomas Heinze Jan 2019

Protonation Behavior Of Dextran Amino Acid Esters, Konrad Hotzel, Lidjia Fras Zemljic, Matej Bracic, Thomas Heinze

Turkish Journal of Chemistry

Dextran esters of different amino acids (glycine, $\beta $-alanine, L-ornithine, L-lysine) are investigated regarding their pK$_{a}$ values by potentiometric titration. The pK$_{a}$ values of the dextran derivatives are generally dependent on the position of the amino group in relation to the ester group, i.e. the nearer they are located in the molecule, the lower the resulting pK$_{a}$ values are, L-ornithine ester being the exception. An influence of the polymer backbone is ruled out. Stability against hydrolysis at different pH values and over longer periods at constant pH value is measured by potentiometric and polyelectrolyte titration. The $\beta $-alanine ester shows …

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Parameterization, Kinetics, And Adsorption Isotherm Of Electrocoagulation Process Of Bromothymol Blue In Aqueous Medium Using Aluminum Electrodes, Okon Abakedi, Victor Mkpenie, John Okafor Jan 2019

Parameterization, Kinetics, And Adsorption Isotherm Of Electrocoagulation Process Of Bromothymol Blue In Aqueous Medium Using Aluminum Electrodes, Okon Abakedi, Victor Mkpenie, John Okafor

Turkish Journal of Chemistry

The removal of bromothymol blue (BTB) from aqueous solution was studied by electrocoagulation (EC) technique using aluminum electrodes. The various experimental conditions known to influence the EC process were parameterized, including the effects of temperature, concentration, current density, pH, and treatment time. The results obtained have shown that optimum removal efficiency of 99.9% was realized at a current density of 20 mA/cm$^{2}$ and pH of 4.7. The adsorption process showed a pseudo-first-order kinetic model as the best fit to the EC data. Freundlich and Langmuir adsorption isotherms supported the adsorption of BTB on aluminum hydroxide being the in situ generated …

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Peripherally 1,2-Dinaphthyl Ethanediol Substituted Phthalocyanine Complexes: Synthesis, Characterization, Aggregation, And Application In Benzyl Alcohol Oxidation At Room Temperature, Hali̇l Zeki̇ Gök, Mustafa Kemal Yilmaz Jan 2019

Peripherally 1,2-Dinaphthyl Ethanediol Substituted Phthalocyanine Complexes: Synthesis, Characterization, Aggregation, And Application In Benzyl Alcohol Oxidation At Room Temperature, Hali̇l Zeki̇ Gök, Mustafa Kemal Yilmaz

Turkish Journal of Chemistry

In this study, the synthesis of a novel 1,2-dinaphthyl ethanediol substituted phthalonitrile (2) together with tetra-substituted zinc(II) phthalocyanine (Pc) (3) and cobalt(II) Pc (4) bearing 1,2-dinaphthyl ethanediol at peripheral positions was described. The aggregation behaviors of metallophthalocyanines 3and 4 in solution were investigated by carrying out Beer-Lambert experiments at different concentrations. In addition, the catalytic activity of new cobalt(II) Pc 4 was investigated for benzyl alcohol oxidation. Benzyl alcohol was converted to benzaldehyde using cobalt(II) Pc 4 as a catalyst by a conversion of 99% with selectivity of 100% at room temperature in 1 h. Several spectroscopic techniques such as …

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Brexit: A Granger Causality Of Twitter Political Polarisation On The Ftse 100 Index And The Pound, James Usher, Lucia Morales, Pierpaolo Dondio Jan 2019

Brexit: A Granger Causality Of Twitter Political Polarisation On The Ftse 100 Index And The Pound, James Usher, Lucia Morales, Pierpaolo Dondio

Conference papers

BREXIT is the single biggest geopolitical event in British history since WWII. Whilst the political fallout has become a tragicomedy, the political ramifications has had a profound impact on the Pound and the FTSE 100 index. This paper examines Twitter political discourse surrounding the BREXIT withdrawal agreement. In particular we focus on the discussions around four different exit strategies known as “Norway”, “Article 50”, the“Backstop” and “No Deal” and their effect on the pound and FTSE 100 index from the period of rumblings of the cancellation of the Meaning Vote on December 10th 2018 inclusive of second defeat on the …

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Notched Hollow Square Section Steel Column Buckling, Zia Razzaq, Solomon Tecleab Jan 2019

Notched Hollow Square Section Steel Column Buckling, Zia Razzaq, Solomon Tecleab

Civil & Environmental Engineering Faculty Publications

Presented in this paper is an outcome of a study to assess the effect of section loss in the form of longitudinal notches on the buckling load of hollow square section steel columns. The theoretical study includes buckling load estimates based on both an iterative equilibrium as well as a non-iterative energy approach. Buckling loads based on sample laboratory experiments are also presented. The study shows that the presence of a notch can significantly reduce the axial load-carrying capacity of a steel column.

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Marine Quay Crane Scheduling Using A Combined Modified Genetic Algorithm And Priority Rules Approach, V. H. Nguyen, D. T. Nguyen Jan 2019

Marine Quay Crane Scheduling Using A Combined Modified Genetic Algorithm And Priority Rules Approach, V. H. Nguyen, D. T. Nguyen

Civil & Environmental Engineering Faculty Publications

Quay crane scheduling problem (QCSP) is the problem of the allocation of quay cranes to handle the unloading and loading of containers at seaport container terminals and defining the service sequence of vessel bays of each quay crane. The treatment of crane interference constraints and the increased in vessel size make the problem difficult to solve. Due to the growing interest in applied research for this problem, many researchers have used different algorithms and methods to obtain some solutions. This paper will propose a modified genetic algorithm combined with priority rules to deal with it. The advantage of the proposed …

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Automatic Detection And Analysis Of Rip Currents At Haeundae Beach Using X-Band Marine Radar, Chanyeong Oh, Kyungmo Ahn, Se-Hyeon Cheon Jan 2019

Automatic Detection And Analysis Of Rip Currents At Haeundae Beach Using X-Band Marine Radar, Chanyeong Oh, Kyungmo Ahn, Se-Hyeon Cheon

OES Faculty Publications

The observation system has been developed to investigate the rip currents at Haeundae beach using Xband marine radar. X-band radar system can observe shape, size, and velocity of rip currents, which is difficult to obtain through field observation by conventional device. Algorithms which automatically detect locations, shapes, and magnitudes of rip currents were developed using time averaged X-band radar sea clutter images. X-band sea clutter images are transformed through 3D FFT into 2D wave number spectrum and frequency spectrum. Rip current velocities were estimated using differences in wave-number spectra and wave frequency spectra due to Doppler shift. The algorithm was …

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Nitrogen Assimilation In Picocyanobacteria Inhabiting The Oxygen-Deficient Waters Of The Eastern Tropical North And South Pacific, Montserrat Aldunate, Carlos Henriquez-Castillo, Qixing Ji, Jessica Lueders-Dumont, Margaret R. Mulholland, Bess B. Ward, Peter Von Dassow, Osvaldo Ulloa Jan 2019

Nitrogen Assimilation In Picocyanobacteria Inhabiting The Oxygen-Deficient Waters Of The Eastern Tropical North And South Pacific, Montserrat Aldunate, Carlos Henriquez-Castillo, Qixing Ji, Jessica Lueders-Dumont, Margaret R. Mulholland, Bess B. Ward, Peter Von Dassow, Osvaldo Ulloa

OES Faculty Publications

Prochlorococcus and Synechococcus are the most abundant free-living photosynthetic microorganisms in the ocean. Uncultivated lineages of these picocyanobacteria also thrive in the dimly illuminated upper part of oxygen-deficient zones (ODZs), where an important portion of ocean nitrogen (N) loss takes place via denitrification and anaerobic ammonium oxidation. Recent metagenomic studies revealed that ODZ Prochlorococcus have the genetic potential for using different N forms, including nitrate and nitrite, uncommon N sources for Prochlorococcus, but common for Synechococcus. To determine which N sources ODZ picocyanobacteria are actually using in nature, the cellular 15N natural abundance (δ15N) and assimilation rates of …

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A Full-Ocean-Depth Rated Modular Lander And Pressure-Retaining Sampler Capable Of Collecting Hadal-Endemic Microbes Under In Situ Conditions, Logan M. Peoples, Matthew Norenberg, David Price, Madeline Mcgoldrick, Mark Novotny, Alexander Bochdansky, Douglas H. Bartlett Jan 2019

A Full-Ocean-Depth Rated Modular Lander And Pressure-Retaining Sampler Capable Of Collecting Hadal-Endemic Microbes Under In Situ Conditions, Logan M. Peoples, Matthew Norenberg, David Price, Madeline Mcgoldrick, Mark Novotny, Alexander Bochdansky, Douglas H. Bartlett

OES Faculty Publications

The hadal zone remains one of the least studied environments because of its inaccessibility, in part because of hydrostatic pressures extending to 110 MPa. Few instruments are capable of sampling from such great depths. We have developed a full-ocean-depth-capable lander that can be fit with sampling packages for the collection of still images, video, motile megafauna, and hadal seawater. One payload includes a pressure-retaining sampler (PRS) able to maintain seawater samples under in situ pressure during recovery. We describe the technical specifications of the lander and the PRS and preliminary results from three deployments at depths in excess of 10,700 …

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Observations And Scaling Of Tidal Mass Transport Across The Lower Ganges-Brahmaputra Delta Plain: Implications For Delta Management And Sustainability, Richard Hale, Rachel Bain, Steven Goodbred Jr., Jim Best Jan 2019

Observations And Scaling Of Tidal Mass Transport Across The Lower Ganges-Brahmaputra Delta Plain: Implications For Delta Management And Sustainability, Richard Hale, Rachel Bain, Steven Goodbred Jr., Jim Best

OES Faculty Publications

The landscape of southwest Bangladesh, a region constructed primarily by fluvial processes associated with the Ganges River and Brahmaputra River, is now maintained almost exclusively by tidal processes as the fluvial system has migrated east and eliminated the most direct fluvial input. In natural areas such as the Sundarbans National Forest, year-round inundation during spring high tides delivers sufficient sediment that enables vertical accretion to keep pace with relative sea-level rise. However, recent human modification of the landscape in the form of embankment construction has terminated this pathway of sediment delivery for much of the region, resulting in a startling …

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Patterns Of Diatom Diversity Correlate With Dissolved Trace Metal Concentrations And Longitudinal Position In The Notheast Pacific Coastal Offshore Transition Zone, P. Dreux Chappell, E. Virginia Armbrust, Katherine A. Barbeau, Randelle M. Bundy, Jagruti Vedamati, Bethany D. Jenkins Jan 2019

Patterns Of Diatom Diversity Correlate With Dissolved Trace Metal Concentrations And Longitudinal Position In The Notheast Pacific Coastal Offshore Transition Zone, P. Dreux Chappell, E. Virginia Armbrust, Katherine A. Barbeau, Randelle M. Bundy, Jagruti Vedamati, Bethany D. Jenkins

OES Faculty Publications

Diatoms are important primary producers in the northeast Pacific Ocean, with their productivity closely linked to pulses of trace elements in the western high nitrate, low chlorophyll (HNLC) region of the oceanographic time series transect 'Line P.' Recently, the coastal-HNLC transition zone of the Line P transect was identified as a hotspot of phytoplankton productivity, potentially controlled by a combination of trace element and macronutrient concentrations. Here we describe diatom community composition in the eastern Line P transect, including the coastal- HNLC transition zone, with a method using high-throughput sequencing of diatom 18S gene amplicons. We identified significant correlations between …

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High Rates Of N² Fixation In Temperate, Western North Atlantic Coastal Waters Expands The Realm Of Marine Diazotrophy, Margaret R. Mulholland, P. W. Bernhardt, Brittany Widner, C. R. Selden, P. D. Chappell, S. Clayton, A. Mannino, K. Hyde Jan 2019

High Rates Of N² Fixation In Temperate, Western North Atlantic Coastal Waters Expands The Realm Of Marine Diazotrophy, Margaret R. Mulholland, P. W. Bernhardt, Brittany Widner, C. R. Selden, P. D. Chappell, S. Clayton, A. Mannino, K. Hyde

OES Faculty Publications

Dinitrogen (N2) fixation can alleviate N limitation of primary productivity by introducing fixed nitrogen (N) to the world's oceans. Although measurements of pelagic marine N2 fixation are predominantly from oligotrophic oceanic regions, where N limitation is thought to favor growth of diazotrophic microbes, here we report high rates of N2 fixation from seven cruises spanning four seasons in temperate, western North Atlantic coastal waters along the North American continental shelf between Cape Hatteras and Nova Scotia, an area representing 6.4% of the North Atlantic continental shelf area. Integrating average areal rates of N2 fixation during …

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An Introduction To The 'Oceans And Society: Blue Planet' Initiative, Emily A. Smail, Paul M. Digiacomo, Sophie Seeyave, Samy Djavidnia, Louis Celliers, Pierre-Yves Le Traon, Jeremy Gault, Elva Escobar-Briones, Hans-Peter Plag, Christine Pequignet, Lenore Bajona, Li Zhang, Jay Pearlman, Andy Steven, Jonathan Hodge, Marie-Fanny Racault, Curt Storlazzi, William Skirving, Ron Hoeke, John Marra, Ap Van Dongeren, Frank Muller-Karger, Douglas Cripe, Daniel Takaki Jan 2019

An Introduction To The 'Oceans And Society: Blue Planet' Initiative, Emily A. Smail, Paul M. Digiacomo, Sophie Seeyave, Samy Djavidnia, Louis Celliers, Pierre-Yves Le Traon, Jeremy Gault, Elva Escobar-Briones, Hans-Peter Plag, Christine Pequignet, Lenore Bajona, Li Zhang, Jay Pearlman, Andy Steven, Jonathan Hodge, Marie-Fanny Racault, Curt Storlazzi, William Skirving, Ron Hoeke, John Marra, Ap Van Dongeren, Frank Muller-Karger, Douglas Cripe, Daniel Takaki

OES Faculty Publications

We live on a blue planet, and Earth’s waters benefit many sectors of society. The future of our blue planet is increasingly reliant on the services delivered by marine, coastal and inland waters and on the advancement of effective, evidence-based decisions on sustainable development. ‘Oceans and Society: Blue Planet’ is an initiative of the Group on Earth Observations (GEO) that aims to ensure the sustained development and use of ocean and coastal observations for the benefit of society. The initiative works to advance and exploit synergies among the many observational programmes devoted to ocean and coastal waters; to improve engagement …

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The Dominant Global Modes Of Recent Internal Sea Level Variability, Benjamin Dillon Hamlington, Se-Hyeon Cheon, Christopher G. Piecuch, Kristopher B. Karnauskas, Philip R. Thompson, Kwang-Yul Kim, John Thomas Reager, Felix W. Landerer, Thomas Frederikse Jan 2019

The Dominant Global Modes Of Recent Internal Sea Level Variability, Benjamin Dillon Hamlington, Se-Hyeon Cheon, Christopher G. Piecuch, Kristopher B. Karnauskas, Philip R. Thompson, Kwang-Yul Kim, John Thomas Reager, Felix W. Landerer, Thomas Frederikse

OES Faculty Publications

The advances in the modern sea level observing system have allowed for a new level of knowledge of regional and global sea level in recent years. The combination of data from satellite altimeters, Gravity Recovery and Climate Experiment (GRACE) satellites, and Argo profiling floats has provided a clearer picture of the different contributors to sea level change, leading to an improved understanding of how sea level has changed in the present and, by extension, may change in the future. As the overlap between these records has recently extended past a decade in length, it is worth examining the extent to …

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Recommended Priorities For Research On Ecological Impacts Of Ocean And Coastal Acidification In The U.S. Mid-Atlantic, Grace K. Saba, Kaitlin A. Goldsmith, Sarah R. Cooley, Daniel Grosse, Shannon L. Meseck, A. Whitman Miller, Beth Phelan, Matthew Poach, Robert Rheault, Kari St. Laurent, Jeremy M. Testa, Judith S. Weis, Richard Zimmerman Jan 2019

Recommended Priorities For Research On Ecological Impacts Of Ocean And Coastal Acidification In The U.S. Mid-Atlantic, Grace K. Saba, Kaitlin A. Goldsmith, Sarah R. Cooley, Daniel Grosse, Shannon L. Meseck, A. Whitman Miller, Beth Phelan, Matthew Poach, Robert Rheault, Kari St. Laurent, Jeremy M. Testa, Judith S. Weis, Richard Zimmerman

OES Faculty Publications

The estuaries and continental shelf system of the United States Mid-Atlantic are subject to ocean acidification driven by atmospheric CO2, and coastal acidification caused by nearshore and land-sea interactions that include biological, chemical, and physical processes. These processes include freshwater and nutrient input from rivers and groundwater; tidally-driven outwelling of nutrients, inorganic carbon, alkalinity; high productivity and respiration; and hypoxia. Hence, these complex dynamic systems exhibit substantial daily, seasonal, and interannual variability that is not well captured by current acidification research on Mid-Atlantic organisms and ecosystems. We present recommendations for research priorities that target better understanding of the …

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Seasonal Variability Of Forces Controlling Sedimentation In The Sundarbans National Forest, Bangladesh, Rip P. Hale, C. A. Wilson, E. J. Bomer Jan 2019

Seasonal Variability Of Forces Controlling Sedimentation In The Sundarbans National Forest, Bangladesh, Rip P. Hale, C. A. Wilson, E. J. Bomer

OES Faculty Publications

Southwest Bangladesh, located on the Ganges-Brahmaputra-Meghna delta, is experiencing the impacts of sea level rise (SLR) due to processes at both the local and global scale. In particular, regional alterations of the hydrodynamic network, due to embankment construction, have drastically altered effective SLR, placing millions of inhabitants at risk of prolonged inundation, and threatening the world’s largest continuous mangrove stand, the Sundarbans National Forest (SNF). In order to effectively employ landscape recovery solutions, an understanding of local sediment transport and deposition is critical. This field-based study investigates the sediment dynamics between the mangrove platform and tidal channels of the SNF …

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Ebullition Of Oxygen From Seagrasses Under Supersaturated Conditions, Matthew H. Long, Kevin Sutherland, Scott D. Wankel, David J. Burdige, Richard C. Zimmerman Jan 2019

Ebullition Of Oxygen From Seagrasses Under Supersaturated Conditions, Matthew H. Long, Kevin Sutherland, Scott D. Wankel, David J. Burdige, Richard C. Zimmerman

OES Faculty Publications

Gas ebullition from aquatic systems to the atmosphere represents a potentially important fraction of primary production that goes unquantified by measurements of dissolved gas concentrations. Although gas ebullition from photosynthetic surfaces has often been observed, it is rarely quantified. The resulting underestimation of photosynthetic activity may significantly bias the determination of ecosystem trophic status and estimated rates of biogeochemical cycling from in situ measures of dissolved oxygen. Here, we quantified gas ebullition rates in Zostera marina meadows in Virginia, U.S.A. using simple funnel traps and analyzed the oxygen concentration and isotopic composition of the captured gas. Maximum hourly rates of …

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Global Perspectives On Observing Ocean Boundary Current Systems, Robert E. Todd, Francisco P. Chavez, Sophie Clayton, Sophie Cravatte, Marlos Goes, Michelle Graco, Xiaopei Lin, Janet Sprintall, Nathalie V. Zilberman, Matthew Archer, Javier Arístegui, Magdalena Balmaseda, John M. Bane, Molly O. Baringer, John A. Barth, Lisa M. Beal, Peter Brandt, Paulo H.R. Calil, Edmo Campos, Luca R. Centurioni, Maria Paz Chidichimo, Mauro Cirano, Meghan F. Cronin, Enrique N. Curchitser, Russ E. Davis, Marcus Dengler, Brad Deyoung, Shenfu Dong, Ruben Escribano, Andrea J. Fassbender, Sarah E. Fawcett, Ming Feng, Gustavo J. Goni, Alison R. Gray, Dimitri Gutiérrez, Dave Hebert, Rebecca Hummels, Shin-Ichi Ito, Marjorlaine Krug, François Lacan, Lucas Laurindo, Alban Lazar, Craig M. Lee, Matthieu Lengaigne, Naomi M. Levine, John Middleton, Ivonne Montes, Mike Muglia, Takeyoshi Nagai, Hilary I. Palevsky, Jaine B. Palter, Helen E. Phillips, Alberto Piola, Albert J. Plueddemann, Bo Qiu, Regina R. Rodrigues, Moninya Roughan, Daniel L. Rudnick, Ryan R. Rykaczewski, Martin Saraceno, Harvey Seim, Alex Sen Gupta, Lynne Shannon, Bernadette M. Sloyan, Adrienne J. Sutton, Luanne Thompson, Anja K. Van Der Plas, Denis Volkov, John Wilkin, Dongxiao Zhang, Linlin Zhang Jan 2019

Global Perspectives On Observing Ocean Boundary Current Systems, Robert E. Todd, Francisco P. Chavez, Sophie Clayton, Sophie Cravatte, Marlos Goes, Michelle Graco, Xiaopei Lin, Janet Sprintall, Nathalie V. Zilberman, Matthew Archer, Javier Arístegui, Magdalena Balmaseda, John M. Bane, Molly O. Baringer, John A. Barth, Lisa M. Beal, Peter Brandt, Paulo H.R. Calil, Edmo Campos, Luca R. Centurioni, Maria Paz Chidichimo, Mauro Cirano, Meghan F. Cronin, Enrique N. Curchitser, Russ E. Davis, Marcus Dengler, Brad Deyoung, Shenfu Dong, Ruben Escribano, Andrea J. Fassbender, Sarah E. Fawcett, Ming Feng, Gustavo J. Goni, Alison R. Gray, Dimitri Gutiérrez, Dave Hebert, Rebecca Hummels, Shin-Ichi Ito, Marjorlaine Krug, François Lacan, Lucas Laurindo, Alban Lazar, Craig M. Lee, Matthieu Lengaigne, Naomi M. Levine, John Middleton, Ivonne Montes, Mike Muglia, Takeyoshi Nagai, Hilary I. Palevsky, Jaine B. Palter, Helen E. Phillips, Alberto Piola, Albert J. Plueddemann, Bo Qiu, Regina R. Rodrigues, Moninya Roughan, Daniel L. Rudnick, Ryan R. Rykaczewski, Martin Saraceno, Harvey Seim, Alex Sen Gupta, Lynne Shannon, Bernadette M. Sloyan, Adrienne J. Sutton, Luanne Thompson, Anja K. Van Der Plas, Denis Volkov, John Wilkin, Dongxiao Zhang, Linlin Zhang

OES Faculty Publications

Ocean boundary current systems are key components of the climate system, are home to highly productive ecosystems, and have numerous societal impacts. Establishment of a global network of boundary current observing systems is a critical part of ongoing development of the Global Ocean Observing System. The characteristics of boundary current systems are reviewed, focusing on scientific and societal motivations for sustained observing. Techniques currently used to observe boundary current systems are reviewed, followed by a census of the current state of boundary current observing systems globally. Next steps in the development of boundary current observing systems are considered, leading to …

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Metaproteomics Reveal That Rapid Perturbations In Organic Matter Prioritize Functional Restructuring Over Taxonomy In Western Arctic Ocean Microbiomes, Molly P. Mikan, H. Rodger Harvey, Emma Timmins-Schiffman, Michael Riffle, Damon H. May, Ian Salter, William S. Noble, Brook L. Nunn Jan 2019

Metaproteomics Reveal That Rapid Perturbations In Organic Matter Prioritize Functional Restructuring Over Taxonomy In Western Arctic Ocean Microbiomes, Molly P. Mikan, H. Rodger Harvey, Emma Timmins-Schiffman, Michael Riffle, Damon H. May, Ian Salter, William S. Noble, Brook L. Nunn

OES Faculty Publications

We examined metaproteome profiles from two Arctic microbiomes during 10-day shipboard incubations to directly track early functional and taxonomic responses to a simulated algal bloom and an oligotrophic control. Using a novel peptide-based enrichment analysis, significant changes (p-value < 0.01) in biological and molecular functions associated with carbon and nitrogen recycling were observed. Within the first day under both organic matter conditions, Bering Strait surface microbiomes increased protein synthesis, carbohydrate degradation, and cellular redox processes while decreasing C1 metabolism. Taxonomic assignments revealed that the core microbiome collectively responded to algal substrates by assimilating carbon before select taxa utilize and metabolize nitrogen intracellularly. Incubations of Chukchi Sea bottom water microbiomes showed similar, but delayed functional responses to identical treatments. Although 24 functional terms were shared between experimental treatments, the timing, and degree of the remaining responses were highly variable, showing that organic matter perturbation directs community functionality prior to alterations to the taxonomic distribution at the microbiome class level. The dynamic responses of these two oceanic microbial communities have important implications for timing and magnitude of responses to organic perturbations within the Arctic Ocean and how community-level functions may forecast biogeochemical gradients in oceans.

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Metagenomic Sequencing Identifies Highly Diverse Assemblages Of Dinoflagellate Cysts In Sediments From Ships' Ballast Tanks, Lixia Shang, Zhangxi Hu, Yunyan Deng, Yuyang Liu, Xinyu Zhai, Zhaoyang Chai, Xiaohan Liu, Zifeng Zhan, Fred C. Dobbs, Ying Zhong Tang Jan 2019

Metagenomic Sequencing Identifies Highly Diverse Assemblages Of Dinoflagellate Cysts In Sediments From Ships' Ballast Tanks, Lixia Shang, Zhangxi Hu, Yunyan Deng, Yuyang Liu, Xinyu Zhai, Zhaoyang Chai, Xiaohan Liu, Zifeng Zhan, Fred C. Dobbs, Ying Zhong Tang

OES Faculty Publications

Ships' ballast tanks have long been known as vectors for the introduction of organisms. We applied next-generation sequencing to detect dinoflagellates (mainly as cysts) in 32 ballast tank sediments collected during 2001-2003 from ships entering the Great Lakes or Chesapeake Bay and subsequently archived. Seventy-three dinoflagellates were fully identified to species level by this metagenomic approach and single-cell polymerase chain reaction (PCR)-based sequencing, including 19 toxic species, 36 harmful algal bloom (HAB) forming species, 22 previously unreported as producing cysts, and 55 reported from ballast tank sediments for the first time (including 13 freshwater species), plus 545 operational taxonomic units …

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Mid-Atlantic Oil Spill Workshop: Are We Ready? A Regional Workshop As Part Of The National Academies And Sea Grant Collaborative Workshop Series, G. Walker, M. Covi Jan 2019

Mid-Atlantic Oil Spill Workshop: Are We Ready? A Regional Workshop As Part Of The National Academies And Sea Grant Collaborative Workshop Series, G. Walker, M. Covi

OES Faculty Publications

(First paragraph) In 2017, the Gulf Research Program (GRP) and the Health and Medical Division of the National Academies of Sciences, Engineering, and Medicine hosted a workshop to prepare for and respond to major marine oil spills. To address gaps identified at the workshop, GRP reached out to the Sea Grant Oil Spill Science Outreach Program to host a series of regional workshops. The Sea Grant Oil Spill team, based in the Gulf, partnered with state Sea Grant programs across the country to plan and deliver regional workshops in 2018-2019. The goals of the workshops were to raise awareness of …

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