Digital Commons Network^™

Beyond Grades: The Impact Of Race And Academic Disidentification On Social Functioning And Academic Outcomes Among At-Risk High School Students, Brian K. Colar

Theses and Dissertations

An extant literature has supported the notion that black students perform poorly in comparison to white students on frequently used indicators of academic functioning, known as the academic gap between races. Although previous studies have identified this academic inequity between White and Black high school students, there is a dearth of literature examining the context and processes which may contribute to this gap. The current study further examines this educational disparity by evaluating the role of students’ social functioning, the impact of race, and academic outcomes among at-risk high school students. Although analytical evidence reports a positive correlation between social …

Extremal Theorems For Degree Sequence Packing And The Two-Color Discrete Tomography Problem, Jennifer Diemunsch, Michael Ferrara, Sogol Jahanbekam, James Shook

Faculty Publications

No abstract provided.

Lucky Choice Number Of Planar Graphs With Given Girth, Axel Brandt, Jennifer Diemunsch, Sogol Jahanbekam

Faculty Publications

No abstract provided.

Science Teaching And Learning As Transformation: Making Meaning With My Students, Megan Marie Leider

Dissertations

As a classroom science teacher, I have experienced firsthand the disengagement and disinterest students have with science. Students often struggle to retain information from year to year, feel comfortable in the science classroom, and see the connections between the science taught in the classroom and their lived experiences. It is obvious to me that we could do more for our students. One way in which to assist students with science learning is through the incorporation of Sci-YAR (Science Youth Action Research). Sci-YAR is a curricular framework and instructional strategy that places the student at the center of their learning. It …

The Influence Of Racial And Crime Stereotypes On Jurors' Representations Of Trial Evidence And Verdict Decisions, Katharina Kluwe

Dissertations

Past research has shown that jurors tend to make more severe culpability judgments when defendants are charged with crimes that are associated with their racial group (e.g., Jones & Kaplan, 2013). Although the Story Model (e.g., Pennington & Hastie, 1988) has received much empirical support and currently is the most prominent model in the juror decision making literature, it has not been applied to cases where racially stereotypical crimes might bias verdict decisions. The present research investigated whether the narrative believability of the stories that are suggested at trial, especially story coherence, would explain the effect of race-crime congruence on …

Pedagogical Content Knowledge In Early Mathematics: What Teachers Know And How It Associates With Teaching And Learning, Yinna Zhang

Dissertations

The study was designed to examine the profile of early childhood teachers' content-specific knowledge, also referred to as pedagogical content knowledge, in early mathematics (PCK-EM) and investigate how PCK-EM relates to the quality of their mathematics teaching quality and students' mathematical learning outcomes. A total of 182 teachers working with high need students from Pre-K through Grade 3 in an urban public school system participated in the study and analyzed a video of mathematics teaching through an online survey. The results painted a bleak picture regarding the profile of early childhood teachers' PCK-EM: as a whole, teachers' survey responses lacked …

Synthesis And Testing Of Photosensitizer-Folate Conjugates And Potential Photosensitizers For Photodynamic Therapy, Jeffrey A. Trautmann

Dissertations

Dissertation Proposal for Jeffrey Trautmann

Photodynamic Therapy (PDT) is a technique that destroys oncogenic (cancerous) cells. It has been used in several countries since the 1980’s. Molecules that contain chromophores can function as photosensitizers, and will absorb light at various wavelengths (that being dependent upon the extent of their conjugation). Certain functional groups, upon absorption of light, can be used to convert O2 to singlet oxygens which are destructive to the cellular environment. Once an in-vitro cell contains a high enough concentration of photosensitizer material and light is able to reach the photosensitizer material, PDT can be used effectively to …

Hash-Map-Eradicator: Filtering Non-Target Sequences From Next Generation Sequencing Reads, Jonathon Brenner, Catherine Putonti

Bioinformatics Faculty Publications

Contemporary DNA sequencing technologies are continuously increasing throughput at ever decreasing costs. Moreover, due to recent advances in sequencing technology new platforms are emerging. As such computational challenges persist. The average read length possible has taken a giant leap forward with the PacBio and Nanopore solutions. Regardless of the platform used, impurities within the DNA preparation of the sample - be it from unintentional contaminants or pervasive symbiots - remains an issue. We have developed a new tool, HAsh-MaP-ERadicator (HAMPER), for the detection and removal of non-target, contaminating DNA sequences. Integrating hash-based and mapping-based strategies, HAMPER is both memory and …

The Project Approach Meta-Project: Inquiry-Based Learning In Undergraduate Early Childhood Teacher Education, Adam S. Kennedy, Erin Horne, Kelcie Dolan, Cindy Herrera, Naomi Malutan, Kathleen Noetzel

Education: School of Education Faculty Publications and Other Works

This article describes a case study involving the planning, phases, and outcomes of an exploration of the Project Approach led by four teacher candidates as part of an undergraduate early childhood teacher preparation program. Four undergraduate junior-level teacher candidates investigated the phases of the Project Approach during their junior year; this work took place during a 26-week learning module comprised of a seminar and part-time student teaching placement in a preschool setting. The candidates aligned the stages of their investigation with the phases of the Project Approach, which provided a framework complementary to that of action research, within which the …

The Brain Geography Mini-Course: A Neuroscience Outreach Effort, Mark Albert

Computer Science: Faculty Publications and Other Works

The way we experience the world - how we go between sensing, thinking, and acting - is in some ways no more of a mystery than understanding how a computer works. Brains are quite complicated and we may never understand the details, but what we know in general can be very interesting. In this mini-course, we will learn how we think. When we see, hear, smell, touch, taste, remember, rehearse, fear something, understand or produce language, move our bodies...specific parts of the brain are used. Students will get a rough introduction to each part and how they interact. This will …

The Next Generation Of Computational Science And Engineering, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

Editor-in-Chief message.

Scientific Software Communities [Guest Editor Introduction], Andy Terrel, Michael Tobis, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

Guest editor introduction

Audit, Accountability And Commitment: School Business Officials' Perceptions Of An Audit Regime, Michael A. Torak

Dissertations - ALL

Prior research has suggested that models intended to explain the organizational commitment of public employees have not accounted for the substantial and often intense external controls imposed on public organizations. A public scandal involving corruption and mismanagement in a New York State public school district resulted in the state legislature implementing a program of reforms intended to increase the financial accountability of public school districts. The aim of this exploratory, multi-subject qualitative study is to gain insight about how financial managers in public school districts experienced the reform and think about external controls that feature an extensive regimen of auditing. …

Controlling Microbial Multicellular Behaviors With Saccharide Derivatives, Nischal Singh

Dissertations - ALL

Microbial multicellular behaviors like biofilm formation and swarming motility are known to increase their tolerance against antimicrobials. From microbial standpoint, nonmicrobicidal agents that do not impede growth are tolerable and therefore, there is a lower propensity to develop resistance against such agents as compared to microbicidal ones (antibiotics). This study describes a new antibiofilm approach of using nonmicrobicidal saccharide derivatives for controlling the multicellular behaviors of gram-negative bacteria, Pseudomonas aeruginosa and fungus, Candida albicans.

Pseudomonas aeruginosa is known to secrete rhamnolipids, a class of biosurfactants that plays an important role in maintaining the architecture of its biofilm and promoting its …

Development Of Improved Methodologies Toward The Formation Of C-C And C-N Bonds, Ijaz Ahmed

Dissertations - ALL

Organometallic chemistry provides valuable tools for the formation of carbon-carbon and carbon-heteroatom bonds that would otherwise require multiple steps and resources to achieve through conventional methods. Studies toward the regioselective and stereoselective formation these types of bonds using different organometallic methods will be presented. Three focal areas have been studied: C-N bond formation, C-H borylation, and silylvinylation of alkynes.

In Chapter 1, palladium-catalyzed amidation has been used to effectively form C-N bonds toward the synthesis of valuable imidazo[4,5-b]pyridines and imidazo[4,5-c]pyridines. The reaction conditions are tolerable for a variety of N-substituted-3-amino-2-chloropyridines. All current routes to expand the substrate scope in regards …

Change Point Detection And Estimation In Sequences Of Dependent Random Variables, Benjamin Cortese

Dissertations - ALL

Two change point detection and estimation procedures for sequences of dependent binary random variables are proposed and their asymptotic properties are explored. The two procedures are a dependent cumulative sum statistic (DCUSUM) and a dependent likelihood ratio test (LRT) statistic, which are generalizations of the independent CUSUM and LRT statistics.

A one step Markov dependence is assumed between consecutive variables in the sequence, and the performance of the DCUSUM and dependent LRT are shown to have substantially better size and power performance than their independent counterparts. In most cases, a comparison of the dependent procedures via simulation shows that the …

Modulation And Interactions Of Charged Biomimetic Membranes With Bivalent Ions, Adolphe Kazadi Badiambile

Dissertations - ALL

The biological membrane of an eukaryotic cell is a two-dimensional structure of mostly phospholipids with embedded proteins. This two-dimensional structure plays many key roles in the life of a cell. Transmembrane proteins, for example, play the role of a gate for different ions (such as Ca2+). Also found are peripheral proteins that are used as enzymes for different purposes in the inner leaflet of the plasma membrane. Phospholipids, in particular play three key roles. Firstly, some members of this group are used to store energy. Secondly, the hydrophobic and hydrophilic properties inherent to phospholipids enable them to be used as …

Mechanics, Shape, And Programmability In Soft Matter Systems: From Fluid Membranes To Spring And Droplet Networks, Tao Zhang

Dissertations - ALL

This thesis analyzes three different soft matter systems---membranes, polymers, and droplets---to answer questions about shape, mechanics, and programmability.

For membranes, my collaborators and I have developed a theoretical model of endocytosis in yeast. Endocytosis is the process by which a cell membrane deforms to surround extracellular material to draw it into the cell. Endocytosis in yeast involves clathrin, actin, and Bar proteins. Our model breaks up the process into three stages: (i) initiation, where clathrin interacts with the cell membrane via adaptor proteins, (ii) elongation, where the membrane is then further deformed by polymerizing actin filaments, followed by (iii) pinch-off. …

Students' Attitudes Towards Socially--But Not Scientifically--Controversial Subjects: Evaluating Ways In Which These Attitudes May Be Shifted, Benjamin Elijah Carter

Dissertations - ALL

Chapter1: Numerous anti-science bills introduced into state legislatures reference the "strengths and weaknesses" of scientific subjects, but the subjects they target, most commonly evolution and global climate change, are not topics of contention within the scientific community. This brief work provides a researched rebuttal to the notion that evolution and climate change have strengths and weaknesses of the form implied by anti-science legislation while providing examples of actual scientific disagreement about these subjects. The disagreement is not, of course, about whether or not evolution or climate change are factual occurrences, but rather over ideas such as the finer points of …

Comparison Of Cost Function Against Positional Analysis For Automated Tracking Of Three-Cell Interactions, Ye He

Dissertations - ALL

Localization and tracking of cells generates raw digital information from microscopy images, including images of stained nuclei and highly precise determination of central positions of cells, which can be analyzed for investigation of cell motility. In a previous study by this group, an algorithm termed automated contour-based tracking for in vitro environments (ACTIVE) was established for tracking large cell populations for long periods of time. For the two-cell interaction events on which ACTIVE was initially focused, error rate was reduced as much as 43% compared to a traditional positional analysis algorithm by Kilfoil and colleagues. In the present thesis, we …

Essays On Local Political Economy In Brazil And The United States, Evan Andrews

Dissertations - ALL

This dissertation covers different aspects of political institutions and fiscal policy in local governments. The first essay examines the political consequences of an increase in the district magnitude (the number of open seats) for legislatures. The second essay studies how the size of a local legislature affects the size and composition of public spending. The third essay develops and tests a theory of how transaction costs might affect the use of earmarked revenues by local budgeting authorities. The last essay compares the relative impacts of factors that might make a local government more likely to adopt own-source revenues. These questions …

Geometry Dependence Of The Sign Problem In Quantum Monte Carlo Simulations, V. Iglovikov, Ehsan Khatami, R. Scalettar

Faculty Publications

The sign problem is the fundamental limitation to quantum Monte Carlo simulations of the statistical mechanics of interacting fermions. Determinant quantum Monte Carlo (DQMC) is one of the leading methods to study lattice fermions, such as the Hubbard Hamiltonian, which describe strongly correlated phenomena including magnetism, metal-insulator transitions, and possibly exotic superconductivity. Here, we provide a comprehensive dataset on the geometry dependence of the DQMC sign problem for different densities, interaction strengths, temperatures, and spatial lattice sizes. We supplement these data with several observations concerning general trends in the data, including the dependence on spatial volume and how this can …

Finite-Temperature Superconducting Correlations Of The Hubbard Model, Ehsan Khatami, Richard Scalettar, Rajiv Singh

Faculty Publications

We utilize numerical linked-cluster expansions (NLCEs) and the determinantal quantum Monte Carlo algorithm to study pairing correlations in the square-lattice Hubbard model. To benchmark the NLCE, we first locate the finite-temperature phase transition of the attractive model to a superconducting state away from half filling. We then explore the superconducting properties of the repulsive model for the d-wave and extended s-wave pairing symmetries. The pairing structure factor shows a strong tendency to d-wave pairing and peaks at an interaction strength comparable to the bandwidth. The extended s-wave structure factor and correlation length are larger at higher temperatures but clearly saturate …

Spectroscopic Confirmation Of The Existence Of Large, Diffuse Galaxies In The Coma Cluster, Pieter Van Dokkum, Aaron Romanowsky, Roberto Abraham, Jean Brodie, Charlie Conroy, Marla Geha, Allison Merritt, Alexa Villaume, Jielai Zhang

Faculty Publications

No abstract provided.

The Scientist, 2015, San Jose State University, College Of Science

The Scientist (College of Science)

No abstract provided.

Identification And Exploitation Of Inadvertent Spectral Artifacts In Digital Audio, N. C. Donnangelo, W. S. Kuklinski, R. Szabo, R. A. Coury, G. R. Hamshar

Journal of Digital Forensics, Security and Law

We show that modulation products from local oscillators in a variety of commercial camcorders are coupled into the recorded audio track, creating narrow band time invariant spectral features. These spectral features, left largely intact by transcoding, compression and other forms of audiovisual post processing, can encode characteristics of specific camcorders used to capture the audio files, including the make and model. Using data sets both downloaded from YouTube and collected under controlled laboratory conditions we demonstrate an average probability of detection (Pd) approaching 0.95 for identification of a specific camcorder in a population of thousands of similar recordings, with a …

Computer Forensic Projects For Accountants, Grover S. Kearns

Journal of Digital Forensics, Security and Law

Digital attacks on organizations are becoming more common and more sophisticated. Firms are interested in providing data security and having an effective means to respond to attacks. Accountants possess important investigative and analytical skills that serve to uncover fraud in forensic investigations. Some accounting students take courses in forensic accounting but few colleges offer a course in computer forensics for accountants. Educators wishing to develop such a course may find developing the curriculum daunting. A major element of such a course is the use of forensic software. This paper argues the importance of computer forensics to accounting students and offers …

Data Loss Prevention Management And Control: Inside Activity Incident Monitoring, Identification, And Tracking In Healthcare Enterprise Environments, Manghui Tu, Kimberly Spoa-Harty, Liangliang Xiao

Journal of Digital Forensics, Security and Law

As healthcare data are pushed online, consumers have raised big concerns on the breach of their personal information. Law and regulations have placed businesses and public organizations under obligations to take actions to prevent data breach. Among various threats, insider threats have been identified to be a major threat on data loss. Thus, effective mechanisms to control insider threats on data loss are urgently needed. The objective of this research is to address data loss prevention challenges in healthcare enterprise environment. First, a novel approach is provided to model internal threat, specifically inside activities. With inside activities modeling, data …

Rules Of Professional Responsibility In Digital Forensics: A Comparative Analysis, Filipo Sharevski

Journal of Digital Forensics, Security and Law

The consolidation of the rules of professional responsibility as recommended by the Committee on Identifying the Needs of Forensic Sciences Community (2009) accents the establishment of an uniform code of ethics emphasizing the importance of enforceability in strengthening the role the forensic science plays within the criminal justice system. Equally pertinent for the domain of digital forensics, this imperative entails a research commitment in comparing and contrasting the respective codes of ethics to illustrate their “variety, specificity and enforceability” in order to inform the discussion on the regulative aspects of the digital forensic discipline. Accordingly, this paper reviews the professional …

On The Network Performance Of Digital Evidence Acquisition Of Small Scale Devices Over Public Networks, Irvin Homem, Spyridon Dosis

Journal of Digital Forensics, Security and Law

While cybercrime proliferates – becoming more complex and surreptitious on the Internet – the tools and techniques used in performing digital investigations are still largely lagging behind, effectively slowing down law enforcement agencies at large. Real-time remote acquisition of digital evidence over the Internet is still an elusive ideal in the combat against cybercrime. In this paper we briefly describe the architecture of a comprehensive proactive digital investigation system that is termed as the Live Evidence Information Aggregator (LEIA). This system aims at collecting digital evidence from potentially any device in real time over the Internet. Particular focus is made …