Open Access. Powered by Scholars. Published by Universities.®

Digital Commons Network™

Open Access. Powered by Scholars. Published by Universities.®

2014

Discipline
Institution
Keyword
Publication
Publication Type
File Type

Articles 28141 - 28170 of 30971

Full-Text Articles in Entire DC Network

When The Price Of Settlement Is Ethically Prohibitive: Non-Disparagement Clauses That Apply To Lawyers, Elayne E. Greenberg Jan 2014

When The Price Of Settlement Is Ethically Prohibitive: Non-Disparagement Clauses That Apply To Lawyers, Elayne E. Greenberg

Faculty Publications

(Excerpt)

At last! You have lived with this case for many years, and you are now on the verge of finalizing the terms of a settlement agreement. All the contentious issues have finally been resolved, so you thought, when the defendant leans over the table and says, “Just one more thing. We want you and your client to sign a non-disparagement clause as part of the settlement.” Yes, non-disparagement clauses have been frequently used as a controversial reputational shield in high-conflict divorces, sensitive employee terminations and contentious consumer actions. However, barely discussed is whether lawyers are ethically able to suggest …


The Compliance Case For Information Governance, Peter Sloan Jan 2014

The Compliance Case For Information Governance, Peter Sloan

Richmond Journal of Law & Technology

In an increasingly convoluted information environment, organizations strive to manage information-related risks and exposures, minimize information-related costs, and maximize information value. The inadequacy of traditional strategies for addressing information compliance, risk, and value is becoming clear, and so too is the need for a better, more holistic approach to governing the organization’s information.


Grounding Drones: Big Brother’S Tool Box Needs Regulation Not Elimination, Melanie Reid Jan 2014

Grounding Drones: Big Brother’S Tool Box Needs Regulation Not Elimination, Melanie Reid

Richmond Journal of Law & Technology

The Ford Model A was advertised as “the latest and best” in the world in 1903 and sparked global interest to design and create better, faster, and more complex machines than had ever traveled on land. Fast forward to the 21st century and creating machines that can travel around the world’s airspace appears to be the latest fascination. Until relatively recently, only airplanes and helicopters dominated the friendly skies. But now, the public is catching on to the idea that building an aircraft is easier that one might expect. In fact, a pilot is no longer necessary. Drones, also referred …


Effect Of Gamma Ray Irradiation And Cryopreservation On Pollen Stainability, In Vitro Germination, And Fruit Set In Citrus, Manoj Kundu, Anil Dubey, Manish Srivastav, Surendra Malik, Bhupinder Singh Jan 2014

Effect Of Gamma Ray Irradiation And Cryopreservation On Pollen Stainability, In Vitro Germination, And Fruit Set In Citrus, Manoj Kundu, Anil Dubey, Manish Srivastav, Surendra Malik, Bhupinder Singh

Turkish Journal of Biology

The present work analyzed the stainability and in vitro germinability of the gamma-ray-irradiated fresh and cryopreserved pollens of 3 Citrus species: C. limon, C. limetta, and C. sinensis. Fruit set after pollinating 75 flowers of C. grandis with irradiated and nonirradiated (control) fresh and cryopreserved pollen was also assessed. Results showed that in solid and liquid culture media the highest in vitro germination values were detected in fresh (61.45% and 62.53%, respectively) as well as cryopreserved (53.17% and 55.36%, respectively) C. sinensis nonirradiated pollens. However, at a higher irradiation dose of 500 Gy in both culture media, the minimum reduction …


Ex Situ Conservation Of Dianthus Giganteus D’Urv. Subsp. Banaticus (Heuff.) Tutin By In Vitro Culture And Assessment Of Somaclonal Variability By Molecular Markers, Liliana Jarda, Anca Butiuc Keul, Maria Hohn, Andrzej Pedryc, Victoria Cristea Jan 2014

Ex Situ Conservation Of Dianthus Giganteus D’Urv. Subsp. Banaticus (Heuff.) Tutin By In Vitro Culture And Assessment Of Somaclonal Variability By Molecular Markers, Liliana Jarda, Anca Butiuc Keul, Maria Hohn, Andrzej Pedryc, Victoria Cristea

Turkish Journal of Biology

Ex situ conservation of Dianthus giganteus subsp. banaticus was obtained by in vitro culture on different culture media supplemented with phytohormones. Assessment of somaclonal variability over a period of preservation by in vitro culture is required prior to introduction and acclimatization in natural habitats. In this study we used 2 types of molecular markers, ISSR and multilocus SSR markers, which allow comparison of different alleles, to assess the somaclonal variability of endemic taxa Dianthus giganteus subsp. banaticus after a period of 24 months of preservation by in vitro culture. The assessment of somaclonal variability of D. giganteus subsp. banaticus shows …


Development Of An Improved Rna Interference Vector System For Agrobacterium-Mediated Plant Transformation, Umut Toprak, Cathy Coutu, Doug Baldwin, Martin Erlandson, Dwayne Hegedus Jan 2014

Development Of An Improved Rna Interference Vector System For Agrobacterium-Mediated Plant Transformation, Umut Toprak, Cathy Coutu, Doug Baldwin, Martin Erlandson, Dwayne Hegedus

Turkish Journal of Biology

Plant-mediated RNA interference (RNAi) has shown a great potential in pest control and requires i) subcloning of sense/antisense regions in compatible vectors, ii) transfer of the silencing cassette into a binary vector, iii) transformation of Agrobacterium tumefaciens with desired binary plasmids, and iv) transformation of plants with Agrobacterium. The procedure is long and should ensure plasmid backbone stability; however, plasmid recombination due to antibiotic selection is a common problem. pGSA1252 is an RNAi silencing binary vector allowing direct cloning of hairpin structure; however, it possesses a chloramphenicol selection marker leading to plasmid recombination in various Agrobacterium strains. To solve this …


The Genus Crocus, Series Crocus (Iridaceae) In Turkey And 2 East Aegean Islands: A Genetic Approach, Osman Erol, Hi̇lal Betül Kaya, Levent Şik, Meti̇n Tuna, Levent Can, Muhammed Bahatti̇n Tanyolaç Jan 2014

The Genus Crocus, Series Crocus (Iridaceae) In Turkey And 2 East Aegean Islands: A Genetic Approach, Osman Erol, Hi̇lal Betül Kaya, Levent Şik, Meti̇n Tuna, Levent Can, Muhammed Bahatti̇n Tanyolaç

Turkish Journal of Biology

In this study, a total of 26 Crocus specimens from different locations across Turkey and 2 East Aegean islands (Chios and Samos) were analyzed using 12 amplified fragment length polymorphism (AFLP) primer combinations to obtain information on genetic diversity, population structure, and genetic relationships. A total of 369 polymorphic AFLP bands were generated and scored as binary data. Genetic similarities were determined. Cluster analysis revealed 4 major groups among the 26 genotypes examined in this study. The nuclear DNA contents (2C) of the 26 Crocus specimens were found to range from 5.08 pg in C. asumaniae to 9.75 pg in …


In Vitro Micropropagation From Immature Embryos Of The Endemic And Endangered Muscari Muscarimi Medik., Sati Uzun, İskender Parmaksiz, Serkan Uranbey, Semra Mi̇ri̇ci̇, Ercüment Osman Sarihan, Ari̇f İpek, Mehmet Demi̇r Kaya, Bi̇lal Gürbüz, Neşet Arslan, Cengi̇z Sancak, Khalid Mahmood Khawar, Sebahatti̇n Özcan Jan 2014

In Vitro Micropropagation From Immature Embryos Of The Endemic And Endangered Muscari Muscarimi Medik., Sati Uzun, İskender Parmaksiz, Serkan Uranbey, Semra Mi̇ri̇ci̇, Ercüment Osman Sarihan, Ari̇f İpek, Mehmet Demi̇r Kaya, Bi̇lal Gürbüz, Neşet Arslan, Cengi̇z Sancak, Khalid Mahmood Khawar, Sebahatti̇n Özcan

Turkish Journal of Biology

An efficient in vitro bulblet production procedure from immature zygotic embryos of endemic and endangered Muscari muscarimi Medik. was described in the current study. Zygotic embryos were first isolated from immature seeds and cultured on different nutrient media compositions supplemented with various combinations of \alpha-naphthalene acetic acid (NAA), picloram, dicamba, 6-benzylaminopurine (BAP), and thidiazuron (TDZ). The best bulblet regeneration (59 bulblets per explant) was achieved in Murashige and Skoog (MS) medium containing 4 mg/L BAP and 0.5 mg/L NAA after 1 year of culture initiation. Regenerated bulblets were then transferred into MS medium without plant growth regulators for rooting. Bulblets …


A Simple Guanidinium Isothiocyanate Method For Bacterial Genomic Dna Isolation, Erkan Mozi̇oğlu, Müslüm Akgöz, Candan Tamerler, Zühtü Tanil Kocagöz Jan 2014

A Simple Guanidinium Isothiocyanate Method For Bacterial Genomic Dna Isolation, Erkan Mozi̇oğlu, Müslüm Akgöz, Candan Tamerler, Zühtü Tanil Kocagöz

Turkish Journal of Biology

A high-quality and low-cost genomic DNA isolation method is needed for use in microbiology laboratories. In this study, we developed a new modified guanidinium isothiocyanate method to isolate DNA from Escherichia coli, Salmonella enterica subsp. enterica serotype Typhimurium, and Staphylococcus aureus and compared it with 4 other DNA isolation methods. The results show that the modified guanidinium isothiocyanate method developed in our laboratory is simple, fast, and inexpensive and yields DNA whose quality and quantity are similar to that of 2 commercial extraction kits but far better than 2 conventional DNA extraction methods used for comparison.


Transgenic Nicotiana Tabacum Cultivar Samsun Plants Carrying The Wild Sugar Beet Hs1pro1 Gene Have Resistance To Root-Knot Nematodes, Çağla Sönmez, İbrahi̇m Hali̇l Elekci̇oğlu, Ayşe Meral Yücel, Hüseyi̇n Avni̇ Öktem Jan 2014

Transgenic Nicotiana Tabacum Cultivar Samsun Plants Carrying The Wild Sugar Beet Hs1pro1 Gene Have Resistance To Root-Knot Nematodes, Çağla Sönmez, İbrahi̇m Hali̇l Elekci̇oğlu, Ayşe Meral Yücel, Hüseyi̇n Avni̇ Öktem

Turkish Journal of Biology

Nematodes are the principal animal parasites of plants, causing annual crop losses of more than US$100 billion worldwide. Conventional control measures against nematode infection include toxic nematicide application to soil, crop rotation practices, and classical breeding approaches. However, due to the limitations of each technique, biotechnology presents itself as an effective alternative in nematode control. To date, several resistance genes against nematodes have been cloned. One such gene, Hs1^{pro1}, cloned from wild sugar beet, Beta procumbens, shows resistance to the cyst nematode Heterodera schachtii. Recent studies showed that Hs1^{pro1} has a broad target pathogen range. In this study, we transformed …


Production Of Biosurfactant By Pseudomonas Spp. Isolated From Industrial Waste In Turkey, Tayfun Kaya, Belma Aslim, Ergi̇n Kari̇ptaş Jan 2014

Production Of Biosurfactant By Pseudomonas Spp. Isolated From Industrial Waste In Turkey, Tayfun Kaya, Belma Aslim, Ergi̇n Kari̇ptaş

Turkish Journal of Biology

In this study, 26 Pseudomonas spp. were isolated from a stream polluted by factory waste and from petroleum-contaminated soil. The surface tension (ST) of the cultures was used as a criterion for the primary isolation of biosurfactant-producing bacteria. Biosurfactant production was quantified by ST reduction, critical micelle concentration (CMC), emulsification capacity (EC), and cell surface hydrophobicity (CSH). Two of the isolates, P. aeruginosa 78 and 99, produced rhamnolipid biosurfactant. The strains started rhamnolipid production in the logarithmic phase. They decreased the ST of the culture from 73 dyne/cm^2 to 29 and 33 dyne/cm^2, and the CMC of produced rhamnolipids were …


Effects Of Different Genotypes And Gamma Ray Doses On Haploidization Using Irradiated Pollen Technique In Squash, Gökhan Baktemur, Namik Kemal Yücel, Hatira Taşkin, Songül Çömlekçi̇oğlu, Saadet Büyükalaca Jan 2014

Effects Of Different Genotypes And Gamma Ray Doses On Haploidization Using Irradiated Pollen Technique In Squash, Gökhan Baktemur, Namik Kemal Yücel, Hatira Taşkin, Songül Çömlekçi̇oğlu, Saadet Büyükalaca

Turkish Journal of Biology

Fourteen genotypes and 3 different gamma ray doses were tested to develop an efficient haploidization protocol in squash. For this purpose, male flowers collected 1 day before anthesis were irradiated with 150, 200, and 300 Gy gamma ray doses, and female flowers were pollinated with the irradiated pollens the next day. In the first year of the study, 1858 embryos were obtained from 219 fruits. While 1358 of these were found in fruits irradiated with a 150 Gy gamma dose, the remaining 500 embryos were found in fruits irradiated with 200 Gy. From fruits irradiated with 150 and 200 Gy …


Expression And Purification Of Porcine Akirin2 In Escherichia Coli, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Huan Wang, Gang Jia, Jiayun Qiao Jan 2014

Expression And Purification Of Porcine Akirin2 In Escherichia Coli, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Huan Wang, Gang Jia, Jiayun Qiao

Turkish Journal of Biology

Akirin2 is a recently discovered gene related to immune responses that also plays an important role in skeletal myogenesis. In this study, in order to scale up the production of recombinant porcine Akirin2 (pAkirin2), we report the expression and purification of a His-tagged version of recombinant pAkirin2 in Escherichia coli. The pAkirin2 is a polypeptide of 203 amino acids containing 42 rare codons. The recombinant pAkirin2 was expressed as an N-terminal fusion protein with His6 tag in E. coli Rosetta (DE3) host strain. The protein was purified by Ni-IDA affinity chromatography, yielding over 90% highly purified recombinant pAkirin2, with a …


Herbicide-Tolerant Sugarcane (Saccharum Officinarum L.) Plants: An Unconventional Method Of Weed Removal, Idrees Ahmad Nasir, Bushra Tabassum, Zahida Qamar, Muhammad Aslam Javed, Muhammad Tariq, Abdul Munim Farooq, Shahid Javed Butt, Abdul Qayyum, Tayyab Husnain Jan 2014

Herbicide-Tolerant Sugarcane (Saccharum Officinarum L.) Plants: An Unconventional Method Of Weed Removal, Idrees Ahmad Nasir, Bushra Tabassum, Zahida Qamar, Muhammad Aslam Javed, Muhammad Tariq, Abdul Munim Farooq, Shahid Javed Butt, Abdul Qayyum, Tayyab Husnain

Turkish Journal of Biology

Unnecessary weed growth in sugarcane fields forces plants to compete for nutrients and sunlight for survival, which most often leads to significant yield losses. As chemical herbicides cannot differentiate between crop plants and weeds, the development of herbicide-tolerant crops is anticipated. Four sugarcane varieties, CPF-234, CPF-213, HSF-240, and CPF-246, were used to develop glyphosate herbicide tolerance. A glyphosate-tolerant gene of 1368 bp cloned directionally under the 35S promoter with the \Beta-glucuronidase (GUS) reporter gene was used as the transgene. Through the biolistic transformation of sugarcane, calli of all cultivars were transformed with glyphosate-tolerant gene constructs. Efficient regeneration conditions were optimized …


Photosynthetic Characteristics Of Red And Green Leaves In Growing Seedlings Of Jatropha Curcas, Munna Singh, Sanjay Ranjan, Krishan Kumar Verma, Uday Vashudav Pathre, Pramod Arvind Shirke Jan 2014

Photosynthetic Characteristics Of Red And Green Leaves In Growing Seedlings Of Jatropha Curcas, Munna Singh, Sanjay Ranjan, Krishan Kumar Verma, Uday Vashudav Pathre, Pramod Arvind Shirke

Turkish Journal of Biology

The use of Jatropha (Jatropha curcas L.) as a source of biofuel is documented. The physiological characteristics and growth studies of Jatropha have received less attention. In the present study, we measured leaf gas exchange with an infrared gas analyzer for red (immature) and green (mature) leaves of Jatropha curcas in response to various environmental conditions including photosynthetic photon flux density (PPFD), vapor pressure difference, and temperature. The seedlings were grown in pots for 45 days in a natural environment. Jatropha is a C_3 plant based on its leaf-gas exchange characteristics. The optimal light-saturated photosynthetic CO_2 assimilation, leaf conductance, and …


Preconditioning Effect Of Cytokinins On In Vitro Multiplication Of Embryonic Node Of Grass Pea (Lathyrus Sativus L.) Cultivar Gürbüz, Surendra Barpete, Muhammad Aasim, Khalid Mahmood Khawar, Sancar Fati̇h Özcan, Sebahatti̇n Özcan Jan 2014

Preconditioning Effect Of Cytokinins On In Vitro Multiplication Of Embryonic Node Of Grass Pea (Lathyrus Sativus L.) Cultivar Gürbüz, Surendra Barpete, Muhammad Aasim, Khalid Mahmood Khawar, Sancar Fati̇h Özcan, Sebahatti̇n Özcan

Turkish Journal of Biology

Lathyrus sativus L. (grass pea) is an important grain legume crop grown all over the world. It is very recalcitrant and difficult to regenerate under in vitro conditions. The present study determined the effect of preconditioning of cytokinins [10 and 20 mg L^{-1} thidiazuron (TDZ) and 2-isopentenyl adenine (2iP)] and postconditioning of dissimilar levels of TDZ-indole-3-butyric acid (IBA) and 2iP-IBA on in vitro shoot multiplication using embryonic node explants. The results showed that preconditioning followed by postconditioning on Murashige and Skoog (MS) medium with 0.25, 0.50, 0.75, and 1.0 mg L^{-1} 2iP or TDZ combined with 0.10 mg L^{-1} IBA …


Study Of Exogenous Oxidative Stress Response In Escherichia Coli, Pseudomonas Spp., Bacillus Spp., And Salmonella Spp., Ifratun Nur, Mohammad Sakil Munna, Rashed Noor Jan 2014

Study Of Exogenous Oxidative Stress Response In Escherichia Coli, Pseudomonas Spp., Bacillus Spp., And Salmonella Spp., Ifratun Nur, Mohammad Sakil Munna, Rashed Noor

Turkish Journal of Biology

With a previous observation of Escherichia coli growth cessation with the supplementation of 3 mM hydrogen peroxide (H_{2}O_{2}) at the late log phase, the current study further demonstrated the consequences of the addition of an increased concentration (6 mM) of H_{2}O_{2} and further extended the investigation on such an oxidant's impact on the growth of Salmonella spp., Pseudomonas spp., and Bacillus spp. Cell culturability was measured through the enumeration of colony-forming units (CFUs) on agar plates for up to 72 h. Subsequent changes in cell morphology and arrangements were monitored, and the cell viability was simultaneously retraced by spot tests. …


Styrian Oil Pumpkin Pollen Germinability At Higher Irradiation Doses: Optimization Of The In Vitro Germination Protocol And Irradiation Procedure, Kristina Kosmrlj, Damijana Kastelec, Borut Bohanec Jan 2014

Styrian Oil Pumpkin Pollen Germinability At Higher Irradiation Doses: Optimization Of The In Vitro Germination Protocol And Irradiation Procedure, Kristina Kosmrlj, Damijana Kastelec, Borut Bohanec

Turkish Journal of Biology

Protocols for haploid induction in cucurbits are based on pollination with irradiated pollen, but the induction frequency is low and the majority of obtained embryos are zygotic. The longevity of Cucurbita pepo L. pollen is short even under natural conditions; following irradiation, germinability is decreased even further. This study was initiated to develop an optimal in vitro germination medium for styrian oil pumpkin (Cucurbita pepo L. subsp. pepo var. styriaca Greb.) pollen, which would enable accurate germination testing. Different pH values and the addition of sucrose, mannitol, and polyethylene glycol to the Brewbaker and Kwack germination medium were tested. The …


Expression And Purification Of Porcine Pid1 Gene In Escherichia Coli, Huan Wang, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Gang Jia, Guangmang Liu, Hua Zhao Jan 2014

Expression And Purification Of Porcine Pid1 Gene In Escherichia Coli, Huan Wang, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Gang Jia, Guangmang Liu, Hua Zhao

Turkish Journal of Biology

In this study, in order to scale up the production of recombinant porcine phosphotyrosine interaction domain containing 1 (pPID1), a pET-28a (+)-pPID1 expression plasmid was constructed and transformed into Escherichia coli Rosetta (DE3). The recombinant pPID1 was then purified and identified by western blotting, and was also analyzed in vitro for its function. The recombinant protein was tagged with only a His6 tag at its C-terminus, which could be conveniently purified by affinity column. The protein could be induced for efficient expression with 0.75 mM IPTG for 8 h at 30 °C, yielding approximately 3 mg/L. In vitro biological activity …


Evaluation Of Orange Peel, An Industrial Waste, For The Production Of Aspergillus Sojae Polygalacturonase Considering Both Morphology And Rheology Effects, Ni̇han Göğüş, Bengi̇ Hakgüder Taze, Hande Demi̇r, Canan Tari, Sevcan Ünlütürk, Marcelo Fernandez Lahore Jan 2014

Evaluation Of Orange Peel, An Industrial Waste, For The Production Of Aspergillus Sojae Polygalacturonase Considering Both Morphology And Rheology Effects, Ni̇han Göğüş, Bengi̇ Hakgüder Taze, Hande Demi̇r, Canan Tari, Sevcan Ünlütürk, Marcelo Fernandez Lahore

Turkish Journal of Biology

Orange peel is an agroindustrial waste rich in pectin and known to be an inducer for pectinase production. The use of this low-cost substrate for the production of an industrially important enzyme, polygalacturonase (PG), can be an alternative way to turn this waste into a value-added product, contributing to the reduction of environmental waste disposal problems. Enzyme productions by fungal microorganisms are affected by environmental and nutritional factors, demanding the determination of optimum conditions for maximum enzyme production with the desired fungal morphology and broth rheology. Therefore, complex and additional carbon sources were optimized with respect to PG production by …


Characterization Of A Novel Xylose Isomerase From Anoxybacillus Gonensis G2^T, Derya Yanmiş, Hakan Karaoğlu, Di̇lşat Ni̇gar Çolak, Fulya Ay Şal, Sabri̇ye Çanakçi, Ali̇ Osman Beldüz Jan 2014

Characterization Of A Novel Xylose Isomerase From Anoxybacillus Gonensis G2^T, Derya Yanmiş, Hakan Karaoğlu, Di̇lşat Ni̇gar Çolak, Fulya Ay Şal, Sabri̇ye Çanakçi, Ali̇ Osman Beldüz

Turkish Journal of Biology

The xylA gene encoding xylose isomerase from Anoxybacillus gonensis G2^T has been cloned and successfully expressed in E. coli. Xylose isomerase was purified 10.98-fold by heat-shock and sequential column chromatography techniques to homogeneity, and the biochemical properties of the enzyme were characterized. The optimum temperature of the enzyme was 85 °C and maximum activity was observed at a pH of 6.5. Its Km and Vmax values were calculated as 25 ± 2 mM and 0.12958 ± 0.002 mumol/min/mg protein, respectively. The effects of various metal ions on the xylose isomerase were examined. Divalent cations Co^{2+}, Mg^{2+}, and Mn^{2+} were essential …


Effect Of Polyamines On In Vitro Anther Cultures Of Carrot (Daucus Carota L.)., Krystyna Górecka, Waldemar Kiszczak, Dorota Krzyzanowska, Urszula Kowalska, Agata Kapuscinska Jan 2014

Effect Of Polyamines On In Vitro Anther Cultures Of Carrot (Daucus Carota L.)., Krystyna Górecka, Waldemar Kiszczak, Dorota Krzyzanowska, Urszula Kowalska, Agata Kapuscinska

Turkish Journal of Biology

This study examines the influence of the polyamines putrescine and spermidine on the efficiency of androgenesis in anther cultures of 2 carrot cultivars, Kazan F_1 and Narbonne F_1, and the effect of putrescine on the process of plant regeneration from androgenetic embryos. In the Kazan F_1 variety, an increase in the number of obtained embryos was achieved using each of the 2 polyamines separately and in combination. In contrast, no beneficial effects of polyamines on the efficiency of androgenesis were observed in the Narbonne F_1 variety. Putrescine added to the regeneration medium increased the number of obtained plants. For embryos …


Large-Scale Purification Of A Bacteriocin Produced By Leuconostoc Mesenteroides Subsp. Cremoris Using Diatomite Calcium Silicate, Hali̇l Dündar, Ömür Çeli̇kbiçak, Beki̇r Sali̇h, Tahsi̇n Faruk Bozoğlu Jan 2014

Large-Scale Purification Of A Bacteriocin Produced By Leuconostoc Mesenteroides Subsp. Cremoris Using Diatomite Calcium Silicate, Hali̇l Dündar, Ömür Çeli̇kbiçak, Beki̇r Sali̇h, Tahsi̇n Faruk Bozoğlu

Turkish Journal of Biology

Leuconostoc mesenteroides subsp. cremoris strain W3, isolated from wine, was previously found to produce a bacteriocin with inhibitory activity towards malolactic bacteria and hence inhibit malolactic fermentation in model wine medium. The bacteriocin, which we termed mesentericin W3, was purified by multistep chromatography and found in a previous study to be similar to mesentericin Y105, albeit with a low recovery (3.2%). In this study, we aimed to achieve large-scale isolation of mesentericin W3 by adsorption of the bacteriocin from culture supernatant onto Micro-Cel (diatomite calcium silicate) and then by subsequent desorption. Water-soluble surfactants including Tween 80, Triton X-100, sodium deoxycholate, …


Comprehensive Evaluation Of Phytoestrogen Accumulation In Plants And In Vitro Cultures Of Medicago Sativa L. 'Elçi' And Natural Tetraploid Trifolium Pratense L., Hati̇ce Çölgeçen, Ufuk Koca Çalişkan, Murat Kartal, Hati̇ce Nurhan Büyükkartal Jan 2014

Comprehensive Evaluation Of Phytoestrogen Accumulation In Plants And In Vitro Cultures Of Medicago Sativa L. 'Elçi' And Natural Tetraploid Trifolium Pratense L., Hati̇ce Çölgeçen, Ufuk Koca Çalişkan, Murat Kartal, Hati̇ce Nurhan Büyükkartal

Turkish Journal of Biology

The main goal of this study was to establish callus cell suspension cultures of Medicago sativa L. 'Elçi' and natural tetraploid Trifolium pratense L. and to compare the isoflavone production of the cultures to the original plants. The callus culture was transferred to liquid Murashige and Skoog media (MS3 and MS5) in order to establish the cell suspension cultures. The extracts were then analyzed by liquid chromatography-mass spectroscopy (LC-MS) for their isoflavones (phytoestrogen), mainly formononetin, biochanin A, daidzein, and genistein. The production of daidzein and formononetin was higher in cell suspension culture than in callus and herba of M. sativa …


In Vitro Regeneration And Conservation Of The Lentisk (Pistacia Lentiscus L.), İbrahi̇m Koç, Ahmet Onay, Yelda Özden Çi̇ftçi̇ Jan 2014

In Vitro Regeneration And Conservation Of The Lentisk (Pistacia Lentiscus L.), İbrahi̇m Koç, Ahmet Onay, Yelda Özden Çi̇ftçi̇

Turkish Journal of Biology

Pistacia lentiscus L. (lentisk or mastic tree) is an economically important member of the genus Pistacia due to its valuable mastic resin. Shoot tips and nodal segments were used as explant sources from in vitro-germinated seeds of lentisk. Shoot tips were found to be suitable for multiple shoot formation. Thereafter, the influences of different growth regulators [N6-benzyladenine (BA), gibberellic acid (GA_3), naphthalene acetic acid (NAA), or jasmonic acid (JA)] together with various elicitors [silver nitrate (AgNO_3) or phloroglucinol (PG)] were assessed to develop efficient micropropagation protocol. Our results showed that the combination of all tested concentrations of GA_3 with 1.0 …


Cloning And Expression Analysis Of 1-Deoxy-D-Xylulose-5-Phosphate Synthase Gene From The Medicinal Plant Conyza Blinii H.Lév., Rong Sun, Shan Liu, Jing-Lei Gao, Zi-Zhong Tang, Hui Chen, Cheng-Lei Li, Qi Wu Jan 2014

Cloning And Expression Analysis Of 1-Deoxy-D-Xylulose-5-Phosphate Synthase Gene From The Medicinal Plant Conyza Blinii H.Lév., Rong Sun, Shan Liu, Jing-Lei Gao, Zi-Zhong Tang, Hui Chen, Cheng-Lei Li, Qi Wu

Turkish Journal of Biology

Conyza blinii H.Lév. is a traditional Chinese medicinal plant that is distributed mainly in southwestern Sichuan and northern Yunnan. Its characteristic product is blinin, which has, among other properties, antigastric ulcer activity, and can serve as a quality-control standard for such medicine. The problem is that C. blinii only produces low yields of blinin. As a diterpene, blinin is likely formed by the methylerythritol phosphate pathway. While 1-deoxy-D-xylulose-5-phosphate synthase (DXS) is the first rate-limiting enzyme in diterpenoid biosynthesis, it is a switch in the pathway. The DXS gene was successfully cloned and characterized from C. blinii by homologous cloning and …


Biodegradation Of The Synthetic Pyrethroid Insecticide Α-Cypermethrin By Stenotrophomonas Maltophilia Og2, Özlem Gür, Murat Özdal, Ömer Faruk Algur Jan 2014

Biodegradation Of The Synthetic Pyrethroid Insecticide Α-Cypermethrin By Stenotrophomonas Maltophilia Og2, Özlem Gür, Murat Özdal, Ömer Faruk Algur

Turkish Journal of Biology

A novel gram-negative bacterium, OG2, was isolated from the body microflora of cockroaches (Blatta orientalis). Based on morphological, biochemical, and 16S ribosomal DNA sequence analysis, the isolated strain OG2 was identified as Stenotrophomonas maltophilia. This bacterial strain was screened for its alpha-cypermethrin-degrading potential with minimal salt medium (MSM). The alpha-cypermethrin degradation and utilization ability of the isolated organism was verified. Bacterial growth was measured by optical density in the presence of the pesticide at different concentrations (50-200 mg/L). S. maltophilia OG2 utilized alpha-cypermethrin as the sole carbon source for growth, and alpha-cypermethrin degradation increased when MSM was supplemented with glucose. …


Nitrate And Iron Nutrition Effects On Some Nitrate Assimilation Enzymes And Metabolites In Spirulina Platensis, Merve Esen, Razi̇ye Öztürk Ürek Jan 2014

Nitrate And Iron Nutrition Effects On Some Nitrate Assimilation Enzymes And Metabolites In Spirulina Platensis, Merve Esen, Razi̇ye Öztürk Ürek

Turkish Journal of Biology

Effects of different sodium nitrate and iron concentrations on the production of some metabolites and pigments and the activities of some nitrate assimilation enzymes [nitrate reductase (NR), nitrite reductase (NiR), glutamine synthetase (GS), and glutamate synthase (GOGAT)] were investigated in the growth medium of Spirulina platensis (Gamont) Geitler. For this purpose, S. platensis was cultivated on Zarrouk's medium containing different sodium nitrate concentrations (10-180 mM). A 100 mM sodium nitrate concentration stimulated growth of this organism as well as the production of pigments and other metabolites and enzyme activities. In the presence of 100 mM sodium nitrate, different concentrations of …


Induction Of Apoptosis In The Cervical Cancer Cell Line Hela By A Novel Metabolite Extracted From The Fungus Aspergillus Japonicus Saito, Apoorva Prabhu, Prerana Venkat, Bharath Gajaraj, Varalakshmi Kilingar Nadumane Jan 2014

Induction Of Apoptosis In The Cervical Cancer Cell Line Hela By A Novel Metabolite Extracted From The Fungus Aspergillus Japonicus Saito, Apoorva Prabhu, Prerana Venkat, Bharath Gajaraj, Varalakshmi Kilingar Nadumane

Turkish Journal of Biology

Natural bioactive compounds have been found superior to chemical compounds for use in pharmaceutical applications. Such natural compounds include biologically active compounds present as a part of fungal metabolism that originate through different biochemical pathways and contain different structural groups like benzopyranones, phenols, toxins, and steroids. One such novel compound is a secondary metabolite extracted from the filamentous fungus Aspergillus japonicus Saito. The compound exhibited anticancer properties and was found to be harmless to normal human lymphocytes. The metabolites were separated by thin layer chromatography and screened for their cytotoxic potential through 3-(4,5-dimethythiazol-2-yl)-2,5-diphenyl tetrazolium bromide assay in the cervical cancer …


Plzf Overexpression In T-All Cell Line Cem-C7h2-2c8 Downregulates Glucocorticoid Receptor (Gr) And Its Target Genes, Muhammad Wasim, Muhammad Mansha, Muhammad Tayyab, Ali Raza Awan, Sehrish Firyal, Christine Mantinger, Tahir Yaqub Jan 2014

Plzf Overexpression In T-All Cell Line Cem-C7h2-2c8 Downregulates Glucocorticoid Receptor (Gr) And Its Target Genes, Muhammad Wasim, Muhammad Mansha, Muhammad Tayyab, Ali Raza Awan, Sehrish Firyal, Christine Mantinger, Tahir Yaqub

Turkish Journal of Biology

Glucocorticoids (GCs) induce cell cycle arrest and apoptosis in lymphoid cells and constitute a central component in the treatment of lymphoid malignancies. The molecular basis of this clinically important phenomenon remains, however, poorly understood. Using whole genome expression profiling we have previously identified glucocorticoid response genes in children with acute lymphoblastic leukemia (ALL). The promyelocytic leukemia zinc finger (PLZF) appeared as one of the most promising candidate genes, which has been implicated in the pathogenesis of several leukemia types. We have already established that transgenic PLZF reduced the sensitivity to GC-induced apoptosis in the CEM-C7H2-2C8 leukemic cell line and knockdown …