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Karyological Studies Of 10 Cirsium Sect. Epitrachys (Asteraceae) Species From Turkey, Eda Yüksel, Yaşar Kiran, Ahmet Şahi̇n, Bayram Yildiz, Turan Arabaci

Turkish Journal of Botany

Detailed karyotype properties were established for 10 Cirsium Mill. sect. Epitrachys DC. species distributed in Turkey. The species Cirsium ligulare Boiss., C. sintenisii Freyn, C. boluënse P.H.Davis & Parris, C. eriophorum (L.) Scop., C. steirolepis Petr., C. baytopae P.H.Davis & Parris, C. poluninii P.H.Davis & Parris, C. ciliatum (Murray) Moench subsp. szovitsii (K.Koch) Petr., C. ellenbergii Bornm., and C. vulgare (Savi) Ten. have the somatic chromosome number 2n = 2x = 34, whereas C. sintenisii and C. vulgare showed 2n = 4x = 68. The chromosome numbers of C. sintenisii, C. boluënse, C. baytopae, C. poluninii, and C. ellenbergii are …

Classification Of Camellia Species From 3 Sections Using Leaf Anatomical Data With Back-Propagation Neural Networks And Support Vector Machines, Wu Jiang, Bi̇llur Barshan Özaktaş, Nitin Mantri, Zhengming Tao, Hongfei Lu

Turkish Journal of Botany

Leaf characteristics provide many useful clues for taxonomy. We used a back-propagation artificial neural network (BP-ANN) and C-support vector machines (C-SVMs) to classify 47 species from 3 sections of genus Camellia (16 from sect. Chrysanthae, 16 from sect. Tuberculata, and 15 from sect. Paracamellia). The classification model was constructed based on 7 leaf anatomy attributes including, area of adaxial epidermal cell, thickness of adaxial epidermal cell, thickness of palisade parenchyma, thickness of total leaf, thickness of spongy parenchyma, thickness of abaxial epidermal cell, and area of abaxial epidermal cell. Model parameters of C-SVM, comprising regularization parameter (C) and kernel parameter …

Cover And Contents

Turkish Journal of Botany

No abstract provided.

Evaluation Of A New Method For Large-Scale And Gene-Targeted Next Generation Dna Sequencing In Nonmodel Species, Ted Cosart

Graduate Student Theses, Dissertations, & Professional Papers

The efficient method called exon capture provides for sequencing genes genome-wide, targeting candidate genes, and sampling specific exons within genes. Although developed for model species with available whole genome sequences, the method can capture exons in nonmodel species using the genomic resources of a related model species. How close the relatives must be for effective exon capture is not known. The work herein demonstrates cross-taxa capture in ungulates, using the domestic cow genome as a reference. It also describes a computer program designed for collecting exon sequences for exon capture, allowing users to set per-gene and overall base pair (bp) …

P-Glycoprotein Transport In Pesticide Pharmacokinetics And Toxicity: Investigating A Link To Parkinson's Disease Risk, Sarah Elizabeth Lacher

Graduate Student Theses, Dissertations, & Professional Papers

Variation in the gene that encodes P-glycoprotein (P-gp), ABCB1, has been associated with Parkinson's disease risk. The aim of my research was to evaluate P-gp transport of pesticides that have been associated with Parkinson's disease as a mechanism for the pharmacogenomic association. To facilitate this aim, a combination of models was utilized to determine P-gp transport of the pesticides diazinon, dieldrin, endosulfan, maneb, MPP+, paraquat, and rotenone. Paraquat pharmacokinetics and brain accumulation were measured in both FVB wildtype and mdr1a(-/-)/1b(-/-) mice. P-gp deficient mice displayed no changes in paraquat brain accumulation, indicating that P-gp does not mediate paraquat disposition. I …

Mothered, Mothering & Motherizing In Illness Narratives: What Women Cancer Survivors In Southern Central Appalachia Reveal About Mothering-Disruption, Kelly A. Dorgan, Kathryn L. Duvall, Sadie P. Hutson, Amber E. Kinser

ETSU Faculty Works

Informed by a mothering-disruption framework, our study examines the illness narratives of women cancer survivors living in Southern Central Appalachia. We collected the stories of twenty-nine women cancer survivors from northeast Tennessee and southwest Virginia using a multi-phasic qualitative design. Phase I consisted of women cancer survivors participating in a day-long story circle (n=26). Phase II consisted of women cancer survivors who were unable to attend the story circle ; this sample sub-set participated in in-depth interviews (n=3) designed to capture their illness narratives. Participants' illness narratives revealed the presence of: (1) mothering-disruption whereby cancer adversely impacted the mothering role …

Sex-Specific Effects Of Exercise Ancestry On Metabolic, Morphological And Gene Expression Phenotypes In Multiple Generations Of Mouse Offspring, Lisa M. Guth, Andrew T. Ludlow, Sarah Witkowski, Mallory R. Marshall, Laila C.J. Lima, Andrew C. Venezia, Tao Xiao, Mei Ling Ting Lee, Espen E. Spangenburg, Stephen M. Roth

Exercise and Sport Studies: Faculty Publications

New findings: • What is the central question of this study? How does parental exercise training directly and/or transgenerationally affect offspring phenotypes over two generations of mice? • What is the main finding and what is its importance? We observed preliminary evidence that parental exercise training can influence health-related phenotypes (e.g. body and fat mass, muscle gene expression) in mouse offspring. These findings indicate that parental exercise may be another environmental factor (like altered nutrition) capable of influencing offspring phenotypes in adulthood. Early life and preconception environmental stimuli can affect adult health-related phenotypes. Exercise training is an environmental stimulus affecting …

Usage-Based Collection Evaluation With A Curricular Focus, Karen C. Kohn

Library Faculty Scholarship

Systematic evaluation of a library’s collection can be a useful tool for collection development. After reviewing three evaluation methods and their usefulness for our small academic library, I undertook a usage-based evaluation, focusing on narrow segments of our collection that served specific undergraduate courses. For each section, I collected data on the number of books owned, number of checkouts in the past four years, and number of unique books used. Using examples from the data, I discuss possible ways to interpret and act on the data. I also note how the knowledge gained from this evaluation fits into the larger …

Stochastic Representations Of The Matrix Variate Skew Elliptically Contoured Distributions, Shimin Zheng, Chunming Zhang, Jeff Knisley

ETSU Faculty Works

Matrix variate skew elliptically contoured distributions generalize several classes of important distributions. This paper defines and explores matrix variate skew elliptically contoured distributions. In particular, we discuss two stochastic representations of the matrix variate skew elliptically contoured distributions.

Staging The Family, Clare Huntington

Faculty Scholarship

For many critical aspects of family life, all the world truly is a stage. When a parent scolds a child on the playground, all eyes turn to watch and judge. When an executive’s wife hosts a work party, the guests are witness to traditional gender roles. And when two fathers attend a back-to-school night for their child, other parents take note of this relatively new family configuration. Family is popularly considered intimate and personal, but in reality much of family life is lived in the public eye. These performances of family and familial roles do not simply communicate messages to …

Unlinked Genetic Loci Control The Reduced Transcription Of Aminopeptidase N 1 And 3 In The European Corn Borer And Determine Tolerance To Bacillus Thuringiensis Cry1ab Toxin, Brad S. Coates, Douglas V. Sumerford, Blair Siegfried, Richard L. Hellmich, Craig A. Abel

Department of Entomology: Faculty Publications

Transgenic expression of Bacillus thuringiensis (Bt) crystalline (Cry) toxins by crop plants result in reduced insect feeding damage, but sustainability is threatened by the development of resistance traits in target insect populations. We investigated Bt toxin resistance trait in a laboratory colony of the European corn borer, Ostrinia nubilalis, selected for increased survival when exposed to Cry1Ab and correlated survival on Cry1Ab toxin with a constitutive~146.2 ± 17.3-fold reduction in midgut aminopeptidase N1 (apn1) transcript levels. A 7.1 ± 1.9-fold reduction apn3 transcript level was also correlated with Cry1Ab resistance. Quantitative trait locus (QTL) mapping identified a single major …

Survey Of Entomopathogenic Nematodes From The Families Steinernematidae And Heterorhabditidae (Nematoda: Rhabditida) In Colima, México, Isaac Zepeda-Jazo, Jaime Molina-Ochoa, Roberto Lezama-Gutiérrez, Steven R. Skoda, John E. Foster

Department of Entomology: Faculty Publications

A survey of entomopathogenic nematodes (EPNs) belonging to the families Steinernematidae and Heterorhabditidae was conducted in three municipalities on the Pacific coast of the State of Colima, Me´xico, to determine their occurrence and recovery frequency and predominant plant species in cultivated and non-cultivated habitats. Nineteen soil samples were collected: seven from non-cultivated habitats and 12 from habitats or areas cultivated mostly with fruit and grain crops and grasses. Of the 19 soil samples, 14 were positive for EPNs; the total prevalence was 73.7%. From the 14 positive soil samples, 12 steinernematid isolates (85.7%) and two heterorhabditid isolates (14.3%) were recovered. …

Evolutionary Biology For The 21st Century, Jonathan B. Losos, Stevan J. Arnold, Gill Bejerano, E. D. Brodie, David Hibbett, Hopi E. Hoekstra, David P. Mindell, Antónia Monteiro, Craig Moritz, H. Allen Orr, Dmitri A. Petrov, Susanne S. Renner, Robert E. Ricklefs, Pamela S. Soltis, Thomas L. Turner

Biology

Theodosius Dobzhansky famously proclaimed that “nothing makes sense in biology except in the light of evolution." Though Dobzhansky's statement is sometimes dismissed by biologists in other fields as self-promotion, recent advances in many areas of biology have shown it to be prophetic. For example, genomics, which emerged mostly from molecular biology, is now steeped in evolutionary biology. Evolutionary theory helps to explain our origins, our history, and how we function as organisms and interact with other life forms, all of which are crucial to understanding our future (e.g., [1]–[5]). Evolutionary approaches have helped reconstruct the history of …

Undergraduate Catalog, Georgia Southern University

Undergraduate & Graduate Catalogs

No abstract provided.

The Association Of Psychosocial Factors On Hiv/Aids Disease Progression, Melissa Margolis

Scripps Senior Theses

Despite a rise in the number of studies looking at the relationship of psychosocial factors (coping style, personality type, and social support) on HIV/AIDS severity, there remains a lack of conclusive answers about the specific association between these factors. This study used a meta-analytic method of analysis to address these issues in the post anti-retroviral treatment modality world. A systematic search of major psychology and medical computerized databases led to 110 studies used in the meta-analysis. Social support was found to have the strongest relationship with HIV progression. Structural social support had greater protective effect on HIV progression than functional …

Family Matters: An Analysis Of Genetic Relatedness Of Tetraclita Rubescens (The Pink Volcano Barnacle) Over Several Spatial Scales At Monterey And Bodega Bay, California, Kelly N. Chang

Scripps Senior Theses

Inbreeding involves the mating of closely related individuals at a higher frequency than at random; this can decrease the average fitness of populations and individuals by reducing the presence of heterozygotes and augmenting the expression of deleterious genes. Since marine invertebrates exhibit widespread dispersal, their potential for inbreeding is often disregarded. The adult sessile state of barnacles creates the potential for inbreeding as a result of necessary copulation between neighboring individuals. Depending on the degree of mixing that occurs during dispersal, closely related individuals or siblings may settle in close proximity, generating the possibility of kin aggregation and consequent inbreeding. …

Thermal Selection In Sceloporus Occidentalis During Exercise Recovery, Morgan A. Halley

Scripps Senior Theses

Ectotherms regulate body temperature (T_b) primarily through behavioral interactions with their environment. These animals also have limited aerobic scopes and must rely on anaerobic metabolism to support intense activity; lactate byproduct and glycogen depletion are two consequences of anaerobic metabolism that must be dealt with during exercise recovery. It has been suggested that, in many ectothermic species, T_b may affect the rate of lactate clearance and glycogen repletion during recovery from intense exercise. This study investigated thermoregulatory behavior in Western Fence Lizards (Sceloporus occidentalis) to determine preferred T_b during exercise recovery. I hypothesized that …

Do Bha And Bht Induce Morphological Changes And Dna Double-Strand Breaks In Schizosaccharomyces Pombe?, Amy V. Tran

Scripps Senior Theses

Butylated Hydroxyanisole, BHA, and Butylated Hydroxytoluene, BHT, are commonly used as preservatives for our food as well as additives in many products such as cosmetics, petroleum, and medicine. Although their use has been approved by the Food and Drug Administration (FDA), there have been controversies and debates on whether these phenol derivatives or antioxidants are safe to use. Their accumulative toxicology and side effects need to be thoroughly investigated as we continue to consume them on a daily basis. Data obtained by genomic analysis in Tang lab suggested the involvement of DNA damage checkpoint/repair pathways in the response network to …

Solid-State Nuclear Magnetic Resonance Analysis Of Cytosine-Methylated Dna Dodecamer, Caitlin A. Edmunds

Scripps Senior Theses

The interaction of deoxyribonucleic acid (DNA) and cellular proteins is absolutely central to any biological understanding of DNA replication, transcription, and even gene regulation. Because an incumbent protein latches not onto the four bases but onto the backbone phosphate groups of the nucleic acid, backbone dynamics directly pertain to an understanding of basic cell processes. Studies have unambiguously proven that DNA exists in a balance of two conformations, BI and BII, defined by the difference in their backbone torsion angles. A given DNA sequence expresses a preference for either BI or BII, though both exist in most samples (and are …

Through The Bottom Of A Drinking Glass: How Beer And Brewing Changed Human History, Matthew Bougher

Master of Liberal Studies Theses

Abstract Every corner of the earth is either currently influenced by or has been influenced by the beer and brewing industry. The significance of this product throughout human history is extensive and one would think the study of it would reflect this. However, until recently the study of beer and brewing was mostly historical and archeological in nature. The social, personal lives and economic impact of those who either consume or produce beer were largely overlooked. This look into how beer and brewing changed cultures and the life of everyone from the king to the peasant is of great importance …

Insects In The World Of Fiction, Erin Bauer

Department of Entomology: Faculty Publications

Since early childhood, I have had a passion for two things: books and insects. While working on master’s degrees in library science and entomology, I’ve had the unique opportunity to combine these fields. My library background led to an interest in bibliographical information, and thus, as part of my master’s program in entomology at the University of Nebraska–Lincoln, I chose to research and compile a list of fictional works (published/produced in the United States, 1950–2012) about or including insects, spiders, related arthropods, and/or entomologists as main characters.

Although there are numerous small bibliographies about insects, a full list seems to …

Aquatic Macroinvertebrate Communities And Water Quality At Buffered And Non-Buffered Wetland Sites On Federal Waterfowl Production Areas In The Rainwater Basin, Nebraska, John R. Riens, Matt S. Schwarz, Fatima Mustafa, William Wyatt Hoback

Department of Entomology: Faculty Publications

Nebraska’s Rainwater Basin has an abundance of natural wetlands and is a focal point in the annual migration corridor used by millions of waterfowl and shorebirds. However, these wetlands are in a landscape dominated by agriculture and as a result, siltation and poor water quality are continual problems. We evaluated twelve wetland sites on federally managed Waterfowl Protection Areas from 2007 – 2009 for water quality, sediment quality, andmacroinvertebrate diversity. Six of the sites received agricultural runoff directly via culverts and drainage ditches (non-buffered sites) and six siteswere protected from agricultural runoff by a vegetated buffer (buffered sites). Mean total …

A Molecular Key For The Identification Of Blow Flies In Southeastern Nebraska, Upeka Samarakoon, Steven R. Skoda, Frederick P. Baxendale, John E. Foster

Department of Entomology: Faculty Publications

Immature blow flies (Calliphoridae) are typically the first colonizers of cadavers. Identification of the early instars using traditional, morphology-based keys is difficult because of their small size, similarity, and simplicity in external morphology. Information derived from molecular genetic data would augment the accurate identification of immature flies. Nine species of blow flies commonly found in southeastern Nebraska were used to examine the utility of molecular-based keys. Polymerase chain reaction–restriction fragment length polymorphisms (PCR–RFLP) were investigated with 10 common, inexpensive, restriction enzymes from an amplicon of approximately 1500 bp spanning the mitochondrial cytochrome oxidase I gene. A simple molecular taxonomic key, …

Towards The Elements Of Successful Insect Rnai, Jeffrey G. Scott, Kristin Michel, L. Bartholomay, Blair Siegfried, Wayne B. Hunter, Guy Smagghe, Kun Yan Zhu, Angela E. Douglas

Department of Entomology: Faculty Publications

RNA interference (RNAi), the sequence-specific suppression of gene expression, offers great opportunities for insect science, especially to analyze gene function, manage pest populations, and reduce disease pathogens. The accumulating body of literature on insect RNAi has revealed that the efficiency of RNAi varies between different species, the mode of RNAi delivery, and the genes being targeted. There is also variation in the duration of transcript suppression. At present, we have a limited capacity to predict the ideal experimental strategy for RNAi of a particular gene/insect because of our incomplete understanding of whether and how the RNAi signal is amplified and …

Immature Stages Of Spodoptera Albula (Walker) (Lepidoptera: Noctuidae): Developmental Parameters And Host Plants, Débora G. Montezano, Alexandre Specht, Tarciso M. Bortolin, Edegar Fronza, Daniel Ricardo Sosa-Gómez, Vânia F. Roque-Specht, Patricia Pezzi, Priscila C. Luz, Neiva M. Barros

Department of Entomology: Faculty Publications

This study aimed to detail the temporal and morphological parameters of the immature stages of Spodoptera albula (Walker 1857) under controlled conditions (25 ± 1°C, 70 ± 10% RH and 14 hour photophase) and to gather information about their larval host plants. For this purpose, a new rearing method and artificial diet was employed and validated. The viability of the egg, larval, pupal and pre-pupal stages was 94.54, 97.33, 93.84 and 92.34%, respectively. The average duration of the egg, larval, pupal and pre-pupal stages was 4.14, 16.37, 1.69, and 9.34 days, respectively. During the larval stage, 80.85% of females and …

Effect Of Hinge Region Phosphorylation On The Localization Of Thp1 In Tetrahymena Thermophila, Emily Bulley, Emily Wiley

Scripps Senior Theses

Within the cell nucleus, there are regions of highly condensed, transcriptionally silent chromatin called heterochromatin. Heterochromatin plays an important role in both chromosomal stability and gene regulation within the cell. Heterochromatin assembly is mediated by Heterochromatin Protein 1 (HP1) binding to epigenetically marked histone tails, most notably methylated H3K9. HP1 is post-translationally phosphorylated at serine and threonine residues, and this phosphorylation has been shown to increase HP1’s binding affinity for methylated H3K9 and heterochromatin formation. To study the effect of phosphorylation on heterochromatin assembly and HP1 localization within the nucleus, the unicellular protozoan Tetrahymena thermophila was used. Tetrahymena is an …

Motivation In Athletes With And Without Autism Spectrum Disorder: Sq, Eq And Aq Relationships To Preferred Feedback, Julia C. Harreschou

Scripps Senior Theses

All athletes are driven by motivation, sources or reasons to push their bodies to their limits and continue to do so regularly. There have been several studies concerning motivation in typical athletes, and many regarding social motivation in people with High Functioning Autism (HFA), however most have been limited to children, and there have been no investigations into HFA athletes’ motivation. The current study looks into the role of social dimensions in athletics, and tests how one’s gender and placement on the Empathy Questionnaire (EQ), Systemizing Questionnaire (SQ), and on the Autism Questionnaire (AQ) affect intrinsic motivation in athletics. It …

Nutritional Status Of Orphaned And Separated Children And Adolescents Living In Community And Institutional Environments In Uasin Gishu County, Kenya, Paula Braitstein, Samuel Ayaya, Winstone M. Nyandiko, Allan Kamanda, Julius Koech, Peter Gisore, Lukoye Atwoli, Rachel C. Vreeman, Corey Duefield, David O. Ayuku

Paediatrics and Child Health, East Africa

Objective: To describe the nutritional status of orphaned and separated children and adolescents (OSCA) living in households in the community (HH), on the street, and those in institutional environments in western Kenya. Methods: The study enrolled OSCA from 300 randomly selected households (HH), 19 Charitable Children’s Institutions(CCIs), and 100 street-involved children. Measures of malnutrition were standardized with Z-scores using World Health Organization criteria; Z-scores #-2 standard deviations (sd) were moderate-severe malnutrition. Data were analyzed using multivariable logistic regression adjusting for child age, sex, HIV status, whether the child had been hospitalized in theprevious year, time living with current guardian, and …

The Spillikin (Vol. 30), Valparaiso University

The Spillikin - The Christ College Newsletter

No abstract provided.

Predicting Groundwater Trading In The Upper Republican Natural Resource District, Elizabeth M. Juchems, Karina A. Schoengold

Cornhusker Economics

While surface water trading has occurred regularly throughout the Western United States and the rest of the world for decades, the use of any type of groundwater trading has been very limited. However, groundwater is increasingly under stress from overuse and many areas are starting to regulate groundwater use. While the public benefits from efficient use of groundwater include adequate stream flow in hydrologically connected areas and future availability of groundwater supplies, there are significant private benefits to landowners, especially in water short areas. Groundwater trading can help move water from low-value to high-value areas of use. Previous work on …