Digital Commons Network^™

Changing The Culture Of Science Education At Research Universities, W. Anderson, U Banerjee, C Drennan, Sarah C.R. Elgin, I Epstein, J Handelsman, G Hatfull, R Losick, D O'Dowd, B Olivera, S Strobel, G Walker, I Warner

Biology Faculty Research

No abstract provided.

Mercury Blastn Biosequence Similarity Search System: Technical Reference Guide, Jeremy Buhler

All Computer Science and Engineering Research

This guide documents the operation of the Mercury BLASTN system for hardware-accelerated DNA similarity search. It includes detailed information on the syntax and limitations of the system's component commands, as well as a description of the system's hardware platform suitable for administrators who need to maintain a Mercury BLASTN system. Mercury BLASTN is a product of the High Performance COmputational Biology Group at Washington University.

End-To-End Communication Delay Analysis In Wirelesshart Networks, Abusayeed Saifullah, You Xu, Chenyang Lu, Yixin Chen

All Computer Science and Engineering Research

WirelessHART is a new standard specifically designed for real-time and reliable communication between sensor and actuator devices for industrial process monitoring and control applications. End-to-end communication delay analysis for WirelessHART networks is required to determine the schedulability of real-time data flows from sensors to actuators for the purpose of acceptance test or workload adjustment in response to network dynamics. In this paper, we map the scheduling of real-time periodic data flows in a WirelessHART network to real-time multiprocessor scheduling. We then exploit the response time analysis for multiprocessor scheduling and propose a novel method for the delay analysis that establishes …

Radio Spectrum And The Disruptive Clarity Of Ronald Coase, Thomas W. Hazlett, David P. Porter, Vernon L. Smith

Economics Faculty Articles and Research

In the Federal Communications Commission, Ronald Coase exposed deep foundations via normative argument buttressed by astute historical observation. The government controlled scarce frequencies, issuing sharply limited use rights. Spillovers were said to be otherwise endemic. Coase saw that Government limited conflicts by restricting uses; property owners perform an analogous function via the “price system.” The government solution was inefficient unless the net benefits of the alternative property regime were lower. Coase augured that the price system would outperform. His spectrum auction proposal was mocked by communications policy experts, opposed by industry interests, and ridiculed by policy makers. Hence, it took …

Analyses Of Variable Refrigerant Flow And Exergy In Air Conditioning Systems, Rashid Ali Alshatti

USF Tampa Graduate Theses and Dissertations

This thesis consists of two research problems in the air conditioning (A/C) area. For the first problem, the aim is to model and simulate a variable refrigerant flow (VRF) air conditioning system. The coefficient of performance (COP) for refrigeration or heat pump system is one of the critical parameters for designing an air conditioning system. The modeling of the system components for a VRF cycle under different cooling conditions using R-134a and R-22 as refrigerants was carried out. Calculations were performed by varying different parameters such as condenser and evaporator temperatures, and refrigerant type. The R-134a refrigerant shows a better …

Thermal Integrity Profiling Instrumentation Development, Byron Keith Anderson

USF Tampa Graduate Theses and Dissertations

This thesis has shown that the development of the instrumentation necessary to provide in-situ thermal imaging for the determination of homogeneity of concrete is theoretically sound.

Drilled shafts are large diameter underground cast-in-place columns that necessarily rely on sound integrity to properly withstand imposed loadings. As a by-product of the most common construction techniques, the entire process is often completely blind whereby the excavation and concreting processes are conducted beneath the surface of the water table (or slurry level). This results in an inability to inspect the final product and in many cases allows anomalous inclusions (soil cave-ins, slurry pockets, …

An Investigation Of The Self-Perceived Principal Leadership Styles In An Era Of Accountability, Kathlene L. Bentley

USF Tampa Graduate Theses and Dissertations

The purpose of this descriptive, quantitative, non-experimental, cross-sectional study was to determine the self-perceived leadership style of principals in an era of accountability. The research instrument was the Multifactor Leadership Questionnaire with added demographic questions. In addition to the determination of the self-perceived principal leadership style, the intention of this study was to determine the possible relationship of demographic variables such as principal gender, experience, ethnicity, school type (elementary, middle school, and high school), school grade, and school socioeconomic status determined by Title I on leadership styles. The participants of the study were principals from three large school districts in …

Assessment Of A Countywide Stormwater Pond Improvement Project: Impacts Of The Hillsborough County Adopt-A-Pond Program, Anthony Thomas Betts

USF Tampa Graduate Theses and Dissertations

Comparative research was conducted to assess the environmental impacts of the Adopt-a-Pond program, which operates throughout Hillsborough County, Florida. The Adopt-a-Pond program was established in 1992 and designed to address nonpoint pollution through outreach and stormwater pond enhancement. However, the program had never been thoroughly and scientifically evaluated. Therefore, assessments of water quality and vegetative characteristics were made at ninety Adopt-a-Pond participants and eleven control ponds to explore the potential impacts of the program on measurable environmental parameters. Statistical analysis of the results failed to demonstrate any statistically significant environmental improvements associated with the Adopt-a-Pond program, and measures of program …

First Year Sedimentological Characteristics And Morphological Evolution Of An Artificial Berm At Fort Myers Beach, Florida, Katherine Brutsche

USF Tampa Graduate Theses and Dissertations

Dredging is often conducted to maintain authorized depths in coastal navigation channels. Placement of dredged sediment in the form of nearshore berms is becoming an increasingly popular option for disposal. Compared to direct beach placement, nearshore berms have fewer environmental impacts such as shore birds and turtle nesting, and have more lenient sediment compatibility restrictions. Understanding the potential morphological and sedimentological evolution is crucial to the design of a nearshore berm. Furthermore, the artificial perturbation generated by the berm installation provides a unique opportunity to understand the equilibrium process of coastal morphodynamics.

Matanzas Pass and Bowditch Point, located on the …

Thermo-Mechanical Beam Element For Analyzing Stresses In Functionally Graded Materials, Simon Caraballo

USF Tampa Graduate Theses and Dissertations

Modeling at the structural scale most often requires the use of beam and shell elements. This simplification reduces modeling complexity and computation requirements but sacrifices the accuracy of through-the-thickness information. Several studies have reported various design approaches for analyzing functionally graded material structures. One of these studies proposed a two-node beam element for functionally graded materials (FGMs) based on first order shear deformable (FOSD) theory. The derivation of governing equations included spatial temperature variation. However, only the constant temperature case was carried through in the element formulation. This investigation explore the effects of spatial temperature variation in the axial and …

Opportunity To Learn (Otl) And The Alignment Of Upper Division Mathematics Learning Outcomes, Textbooks, And The National Assessment In Belize, Gabriel Cal

USF Tampa Graduate Theses and Dissertations

In this study I investigate the degree of alignment among the learning outcomes, textbooks, and the national assessment in Belize. To establish the degree of alignment, Webb‘s Four Cognitive Levels of Depth of Knowledge was used to analyze the levels of cognitive demand for each curriculum. The degree of alignment of the learning outcomes with the test items and textbooks was used to determine the extent to which the textbooks provide students with the opportunity to study the learning outcomes assessed by the national assessment. The opportunity to learn (OTL) measures addressed were the curricular content coverage and types of …

A Comparative Study Of Eucalanoid Copepods Residing In Different Oxygen Environments In The Eastern Tropical North Pacific: An Emphasis On Physiology And Biochemistry, Christine J. Cass

USF Tampa Graduate Theses and Dissertations

The eastern tropical north Pacific (ETNP) is characterized by one of the ocean's most severe midwater oxygen minimum zones (OMZs), where oxygen levels are often less than 5 µM. The copepod family Eucalanidae is a numerically abundant and diverse zooplankton group in the ETNP, and displays a wide range of vertical distributions related to environmental oxygen concentrations. The goal of this dissertation was to develop a better understanding of the ecology, physiology, and biochemistry of closely related copepod species (family Eucalanidae) that inhabit the ETNP OMZ system. This was accomplished through examining different parameters relating to (1) metabolic rates, (2) …

Generalizations Of A Laplacian-Type Equation In The Heisenberg Group And A Class Of Grushin-Type Spaces, Kristen Snyder Childers

USF Tampa Graduate Theses and Dissertations

In [2], Beals, Gaveau and Greiner find the fundamental solution to a 2-Laplace-type equation in a class of sub-Riemannian spaces. This fundamental solution is based on the well-known fundamental solution to the p-Laplace equation in Grushin-type spaces [4] and the Heisenberg group [6]. In this thesis, we look to generalize the work in [2] for a p-Laplace-type equation. After discovering that the "natural" generalization fails, we find two generalizations whose solutions are based on the fundamental solution to the p-Laplace equation.

Lead Discovery And Optimization Strategies Towards The Development Of 4(1h)-Quinolones And 1,2,3,4-Tetrahydroacridone Analogs With Antimalarial Activity, Richard Matthew Cross

USF Tampa Graduate Theses and Dissertations

The goal of our research endeavor was to successfully employ modern lead discovery and optimization strategies towards the development and identification of compounds possessing antimalarial activity. Preliminary data from in vitro screening at the Walter Reed Army Institute of Research identified several chemotypes including 4(1H)-quinolones and 1,2,3,4-tetrahydroacridones to have potent antimalarial activities. Multiple synthetic routes were devised and implemented which enabled the rapid preparation and isolation of over 400 structurally diverse 4(1H)-quinolones and 1,2,3,4-tetrahydroacridones.

Our research towards discovering and optimizing antimalarials was inspired from the severe impact malaria has had on our planet especially on impoverished countries. There are over …

Guanidines, Amidines And Carbamides As Novel Sigma Receptor Ligands For Post-Stroke Therapeutics, Michelle Yolanda Cortes-Salva

USF Tampa Graduate Theses and Dissertations

Stroke is the 3^rd leading cause of death in the United States. For this reason, it has become our goal to find a drug that is capable of reestablishing intracellular and extracellular Ca⁺² flux upon direct binding to the sigma receptor, which can be delivered easily and efficiently. Our active research focuses the development of guanidine analogues that can serve as therapeutic drugs which target sigma 1 and sigma 2 receptors having a direct effect on Ca⁺² levels on the cell. The use of symmetrical guanidine analogues such as N,N'-di-o-tolyl guanidine (o-DTG) as therapeutic drugs for ischemic …

"Can't Buy Me Wealth": Racial Segregation And Housing Wealth In Hillsborough County, Florida, Natalie Marie Delia Deckard

USF Tampa Graduate Theses and Dissertations

Informed by the literature regarding the gap in wealth between white and non-white households in the United States, as well as the literature on segregation and neighborhood preference, this research explores the home value component of the wealth gap in Hillsborough County, Florida. It finds that homes in Predominantly Black or Hispanic neighborhoods are not only undervalued compared to Predominantly White and heterogeneous neighborhoods, but have appreciated more slowly at least since 2000. The research also finds that buyers identifying as black or Hispanic are more likely than those identifying as white or "other" to purchase homes in Predominantly Black …

Philosophical Precursors To The Radical Enlightenment: Vignettes On The Struggle Between Philosophy And Theology From The Greeks To Leibniz With Special Emphasis On Spinoza, Anthony John Desantis

USF Tampa Graduate Theses and Dissertations

My dissertation lays out some of the chief philosophical precursors to Jonathan Israel's Radical Enlightenment. It investigates the principal question of Will Durant's The Age of Voltaire: "How did it come about that a major part of the educated classes in Europe and America has lost faith in the theology that for fifteen centuries gave supernatural sanctions and supports to the precarious and uncongenial moral code upon which Western civilization has been based?" The aim of this project is both broad and specific: the first is to provide a general history of the philosophical precursors to the Radical Enlightenment up …

A National Survey Of Instructional Strategies Used To Teach Information Systems Courses: An Exploratory Investigation, Yenni Merlin Djajalaksana

USF Tampa Graduate Theses and Dissertations

Many universities and colleges have placed increased emphasis on teaching excellence in higher education. Efforts to promote teaching excellence vary from the development of alternative new pedagogies as well as research exploring strategies to improve existing teaching practices. Logically, different disciplines employ different instructional strategies to prepare their graduates with specific skills, knowledge, and attitudes. This study examined the instructional strategies used most frequently in the information systems discipline and was inspired by Shulman's (2005) concept of signature pedagogies - the unique but pervasive ways of teaching within a discipline or profession.

This dissertation reports a national survey of instructional …

Population Biology, Ecology, And Ecosystem Contributions Of The Eastern Oyster (Crassostrea Virginica) From Natural And Artificial Habitats In Tampa Bay, Florida, Michael Drexler

USF Tampa Graduate Theses and Dissertations

The objective of this project was to document the status of oysters, Crassostrea virginica, from non-reef habitats throughout Tampa Bay, Florida, and assess the ecosystem contributions of those populations relative to reef-dwelling oysters. The aspects of oyster ecology studied here include condition, prevalence and intensity of disease (Perkinsus marinus - dermo), reproductive activity (including stage, fecundity, and juvenile recruitment), adult oyster density, and the faunal community associated with the oysters.

The predominant source of variation was seasonal, with lesser contributions among sites, and in most cases, little or no effect of the habitat type. Oysters populations from each habitat …

Regulation Of Cell Adhesion Strength By Spatial Organization Of Focal Adhesions, Kranthi Kumar Elineni

USF Tampa Graduate Theses and Dissertations

Cell adhesion to extracellular matrix (ECM) is critical to various cellular processes like cell spreading, migration, growth and apoptosis. At the tissue level, cell adhesion is important in the pathological and physiological processes that regulate the tissue morphogenesis. Cell adhesion to the ECM is primarily mediated by the integrin family of receptors. The receptors that are recruited to the surface are reinforced by structural and signaling proteins at the adhesive sites forming focal adhesions that connect the cytoskeleton to further stabilize the adhesions. The functional roles of these focal adhesions extend beyond stabilizing adhesions and transduce mechanical signals at the …

Meta-Analysis Of Single-Case Data: A Monte Carlo Investigation Of A Three Level Model, Corina M. Owens

USF Tampa Graduate Theses and Dissertations

Numerous ways to meta-analyze single-case data have been proposed in the literature, however, consensus on the most appropriate method has not been reached. One method that has been proposed involves multilevel modeling. This study used Monte Carlo methods to examine the appropriateness of Van den Noortgate and Onghena's (2008) raw data multilevel modeling approach to the meta-analysis of single-case data. Specifically, the study examined the fixed effects (i.e., the overall average baseline level and the overall average treatment effect) and the variance components (e.g., the between person within study variance in the average baseline level, the between study variance in …

Palaeoclimatic Significance Of Perennial Ice Accumulations In Caves: An Example From Scarisoara Ice Cave, Romania, Aurel Persoiu Tiritu

USF Tampa Graduate Theses and Dissertations

Stable isotopes in ice cores drilled in the polar and high-mountain region have been used intensively to reconstruct past climatic changes and atmospheric dynamics. However, no similar studies have been conducted on perennial ice accumulations in caves due to a limited understanding of the links between the external and cave environments, and the way in which the climatic signal can be recorded by the cave ice.

In this thesis, we successfully designed and build a research methodology for the reconstruction of past climatic changes based on perennial ice accumulation in caves, using as example the Scarisoara Ice Cave, Romania. The …

Relations Among Classroom Support, Academic Self-Efficacy, And Perceived Stress During Early Adolescence, Krystle Kuzia Preece

USF Tampa Graduate Theses and Dissertations

The purpose of this study was to gain insight into the relations between support, academic self-efficacy, and stress during the transition into middle school. Research suggests that early adolescents experience an increase in stress across the middle school transition (e.g., Chung, et al., 1998), due to a mismatch between the individuals' developmental needs and the environment (Eccles et al., 1993). Stress has been found to be a risk factor for mental health disorders among adolescents (Grant et al., 2003). The current study examined if teacher and classmate support and academic self-efficacy served as external and internal resources for buffering stress …

Carbon Nanotubes Interactions: Theory And Applications, Adrian Popescu

USF Tampa Graduate Theses and Dissertations

A theoretical framework describing the carbon nanotubes interaction, involving two distinct approaches, is presented. Based on the results obtained practical applications using carbon nanotubes are further proposed.

First a classical approach is employed for different geometrical configurations, such as parallel or concentric carbon nanotubes. For all the cases analytical expressions for the systems potential energies are derived.

The results obtained using the classical approach are used to propose a few practical applications. These applications include a non-contact device for profiling surfaces and a custom telescopic double wall carbon nanotube for nanolithography applications. It is expected that such devices can be …

Biological Effective Dose (Bed) Distribution Matching For Obtaining Brachytherapy Prescription Doses & Dosimetric Optimization For Hybrid Seed Brachytherapy, Jakub Pritz

USF Tampa Graduate Theses and Dissertations

Radioactive seed implant brachytherapy is a common radiotherapy treatment method for prostate cancer. In current clinical practice, a seed consists of a single isotope, such as ¹²⁵I or ¹⁰³Pd. A seed containing a mixture of two isotopes has been proposed for prostate cancer treatment. This study investigates a method for defining a prescription dose for new seed compositions based on matching the biological equivalent dose (BED) of a reference plan.

Ten prostate cancer cases previously treated using single isotope seeds (5 using ¹²⁵I seeds and 5 using ¹⁰³Pd seeds) were selected for this study. Verification of …

Realizing Virtuality: Tracing The Contours Of Digital Culture, Nicholas Andrew Riggs

USF Tampa Graduate Theses and Dissertations

People connect digitally through social media, fusing their relationships with meaning in a non-space of relational potential--a translucent and fluctuating enclave where the self becomes elastic. This thesis explores how I have formed bonds in virtual space through ritual interaction. Looking at the ways I learned to use technology through the progression of a close personal relationship, I suggest that social media use is a performance of identity--a virtuality that exposes how people negotiate the digital enclosure of contemporary society. My story is one of digital nativity and reclaiming love through virtual performance. I show how these performances have had …

The Relationship Between Statistics Self-Efficacy, Statistics Anxiety, And Performance In An Introductory Graduate Statistics Course, William Ray Schneider

USF Tampa Graduate Theses and Dissertations

The purpose of this study was to determine the relationship between statistics self-efficacy, statistics anxiety, and performance in introductory graduate statistics courses. The study design compared two statistics self-efficacy measures developed by Finney and Schraw (2003), a statistics anxiety measure developed by Cruise and Wilkins (1980), and a course performance measure. To view self-efficacy from two perspectives, the Current Statistics Self-Efficacy (CSSE) assessed student confidence in their ability to complete specific statistics tasks in the present, whereas Self-Efficacy to Learn Statistics (SELS) assessed student confidence in their ability to learn statistics in the future. The performance measure was the combined …

A Sedimentary Record Of Regional Land-Use And Climate Change In The Manatee River, Manatee County, Florida, Patrick Schwing

USF Tampa Graduate Theses and Dissertations

The Manatee River Watershed (Manatee County, FL) has experienced heavy anthropogenic development over the last 100 years and was relatively pristine previous to this development. The population growth within the watershed has surpassed the national trends and has doubled in the last 30 years. The heavy anthropogenic development has led to depletion in natural resources, nutrient loading, coastal erosion, and increased pollution. This study constructs records of sedimentological processes to compare the pre-development records to the past 100 years of anthropogenic development. The first portion of this study identifies specific changes in sedimentation attributed to anthropogenic activity in the Manatee …

Parent Involvement In Children's Schooling: An Investigation Of Measurement Equivalence Across Ethnic Groups, Heather Marie Scott

USF Tampa Graduate Theses and Dissertations

Epstein et al.'s Theory of Overlapping Spheres of Influence focuses on the interaction and communication, or partnerships, among families, schools, and the community to bring the three closer together. The theory works in conjunction with Epstein's typology of parental involvement, which focuses on six types of involvement that are instrumental to a child's development and his/her school and educational success. These serve as the framework for the study and support the construct of parent's involvement in children's schooling.

The purpose of the current study was to conduct further validation analyses of an inventory designed to measure the construct of parent …

El Poder / The Power: Latino/A Literature Inclusion In The Florida High School Language Arts Classroom As A Contributing Deterrent To The Latino/A Dropout Rate, Monica Adriana Sleeter

USF Tampa Graduate Theses and Dissertations

Curricula throughout the country, specifically in the School District of Hillsborough County (SDHC), do not encompass diverse subject matter as it relates to Latino/a students. The primary argument posed in this thesis is that consistent engagement to Latino/a writings in the English language arts classroom can be a positive force that contributes to an increased rate of retention of Latino/a youths in high school and a higher percentage of Latino/a high school graduates. This Latino/a literature can be in the form of supplementary reading material that teachers will have access to that will include Latino/a literature from various authors that …