Digital Commons Network^™

GenHtr: A Tool For Comparative Assessment Of Genetic Heterogeneity In Microbial Genomes Generated By Massive Short-Read Sequencing, Gongxin Yu

Biology Faculty Publications and Presentations

Background: Microevolution is the study of short-term changes of alleles within a population and their effects on the phenotype of organisms. The result of the below-species-level evolution is heterogeneity, where populations consist of subpopulations with a large number of structural variations. Heterogeneity analysis is thus essential to our understanding of how selective and neutral forces shape bacterial populations over a short period of time. The Solexa Genome Analyzer, a next-generation sequencing platform, allows millions of short sequencing reads to be obtained with great accuracy, allowing for the ability to study the dynamics of the bacterial population at the whole genome …

Training In Basic Care Reduces Neonatal Deaths In Developing Countries, Staff

Browse All News

No abstract provided.

Deer Mouse (Peromyscus Maniculatus) Home-Range Size And Fidelity In Sage-Steppe Habitat, Britta A. Wood, Lin Cao, M. Denise Dearing

Western North American Naturalist

Within a species, home-range size can vary due to factors such as sex, mass, age, and breeding condition of individuals as well as habitat type, food availability, population density, and season. The objectives of this study were to estimate home ranges of deer mice (Peromyscus maniculatus) in sage-steppe habitat and to test the hypothesis that several factors (sex, mass, reproductive status, and seasonality) affect home-range size. We also tested the hypothesis that deer mice exhibit home-range fidelity over time. Passive integrated transponder (PIT) technology was used to estimate home ranges in June and September 2006. Home-range estimates varied …

Hidden In Plain View: Legal Geography From A Visual Perspective, Irus Braverman

Journal Articles

Law, with a capital “L” at least, is not particularly fond of hiding itself. In order to be effective, law must be asserted in the world; it must be acknowledged; and, most importantly, it must be visually seen. Why, then, would law hide itself in space? And, perhaps more importantly, how would it do so? And why would such hidden places of law be of importance to us? This paper explores the dual project of seeing and concealing within the context of legal geography. It examines how law sees the physical landscape and how it is seen from a spatial …

Today - October 6, 2010, Loma Linda University

TODAY

Inside this issue:

-- Two recent LLU graduates contribute to post-quake health care in Haiti
-- Board of Trustees names new dean to lead Loma Linda University School of Public Health
-- South Korean dental educators visit LLU School of Dentistry
-- Soon-to-be centenarian remembers LLU visionary Ellen White
-- Loma Linda University School of Public Health mourns death of founding dean
-- LLU seeks children with chronic abdominal pain for study
-- Siu-Fun Wong, PharmD, joins LLU School of Pharmacy faculty
-- Michael Rettig: From Vietnam to the Silver Star
-- High tea and high fashion at Seheult Estate …

The Genesis Of Pathogenic E. Coli, Alan L. Gillen, Douglas Oliver

Faculty Publications and Presentations

Even though some strains are pathogenic, most E. coli strains still show evidence of being one of God’s “very good” creations.

Fig. 1. E. coli Gram stain (Wiki commons image). E. coli are Gram-negative bacteria, thus red or pink colored. The red color is due to a counterstain, called safranin.

Escherichia coli is frequently in the news (Fig. 1). E. coli often gets “bad press” for contaminating drinking water or causing a food-borne infection (via hamburgers, apple juice, spinach, or other foods). Recently a new strain (E. coli O145) has been implicated in contaminating lettuce in the U.S., while …

November 2010 Events Presented By Uab's Alys Stephens Center, Staff

Browse All News

No abstract provided.

Handling External Events Efficiently In Gillespie's Stochastic Simulation Algorithm, Brad Geltz

Theses and Dissertations

Gillespie's Stochastic Simulation Algorithm (SSA) provides an elegant simulation approach for simulating models composed of coupled chemical reactions. Although this approach can be used to describe a wide variety biological, chemical, and ecological systems, often systems have external behaviors that are difficult or impossible to characterize using chemical reactions alone. This work extends the applicability of the SSA by adding mechanisms for the inclusion of external events and external triggers. We define events as changes that occur in the system at a specified time while triggers are defined as changes that occur to the system when a particular condition is …

The Statesman, V. 54, I. 06, Stony Brook University

Stony Brook Statesman-Sucolian

v. 54, i. 06

Uconn School Of Medicine Dean's Newsletter, Fall 2010, Cato T. Laurencin

Annual Reports - Education

From the earliest days of my career in orthopaedic surgery and chemical engineering, I have been fascinated with the prospect of regrowing bone and connective tissue to help patients regain mobility. It is now my privilege to be leading teams of scientists not only in my own lab but throughout the UConn Health Center who are pursuing promising research in this area. This includes Dr. David Rowe who has devoted most of his career to the study of osteogenesis imperfecta and is now pioneering new approaches for bone and tissue regeneration through the use of adult and embryonic stem cells. …

Serum Fibrosis Markers Are Associated With Liver Disease Progression In Non-Responder Patients With Chronic Hepatitis C, Herbert L. Bonkovsky

UCHC Articles - Research

Abstract

OBJECTIVES

The aim of this study was to explore the association of serum fibrosis marker levels with the risk of clinical and histological disease progression in a large cohort of patients with chronic hepatitis C (CHC)

DESIGN/SETTING

462 prior non-responders to peginterferon and ribavirin enrolled in the randomized phase of the Hepatitis C Antiviral Long-term Treatment against Cirrhosis (HALT-C) Trial had baseline and annual serum samples tested for hyaluronic acid (HA), n-terminal peptide of procollagen type 3, tissue inhibitor of matrix metalloproteinase-1, and YKL-40.

OUTCOME MEASURES

All patients underwent a pretreatment liver biopsy and follow-up biopsies at years 2 …

“Mieux Vaut Prévenir Que Guérir”: The Effect Of Natural Disasters On Water- And Sanitation-Related Infectious Diseases And The Increasing Need For Disaster Preparedness, Naomi Malam

Independent Study Project (ISP) Collection

The world is suffering from an extreme global water crisis. 1.1 billion people in the world lack access to adequate clean water, and 2.6 billion people lack access to water and sanitation. Approximately 10 million deaths per year can be attributed to this water crisis; water-borne infectious diseases play a significant role in this death toll. Diarrhoeal disease accounts for 2.6 million deaths per year and is one of the leading causes of death in many developing countries.

We are entering a period of undeniable climate change which is bringing about more natural disasters and extreme weather events than ever …

Explorer, Fall 2010, College Of Dental Medicine

Newsletters

No abstract provided.

Progress Notes, Lehigh Valley Health Network

Progress Notes

No abstract provided.

The Affordable Care Act: U.S. Vaccine Policy And Practice, Alexandra M. Stewart, Orriel L. Richardson, Marisa A. Cox, Katherine J. Hayes, Sara J. Rosenbaum

Health Policy and Management Faculty Publications

When fully implemented, the Patient Protection and Affordable Care Act, amended by the Health and Education Reconciliation Act will extend health insurance coverage to 94 percent of Americans while establishing a comprehensive set of strategies to improve care and contain costs. The central provisions of the Act – guaranteed affordable and accessible coverage – take effect January 1, 2014. Important insurance reforms aimed at improving coverage become effective before that date, as do a series of investments aimed at improving the accessibility and quality of health care.

This report has several aims: 1) to examine how the laws address vaccine …

Range-Wide Determinants Of Plague Distribution In North America, Sean P. Maher, Christine Ellis, Kenneth L. Gage, Russell E. Enscore, A. Townsend Peterson

College of Natural and Applied Sciences

Plague, caused by the bacterium Yersinia pestis, is established across western North America, and yet little is known of what determines the broad-scale dimensions of its overall range. We tested whether its North American distribution represents a composite of individual host-plague associations (the "Host Niche Hypothesis"), or whether mammal hosts become infected only at sites overlapping ecological conditions appropriate for plague transmission and maintenance (the "Plague Niche Hypothesis"). We took advantage of a novel data set summarizing plague records in wild mammals newly digitized from paper-based records at the Centers for Disease Control and Prevention to develop range-wide tests of …

Mcnair Messenger- Fall 2010, Mcnair Staff

McNair Messenger

McNair Scholars Program

Lifelines Fall 2010, Southern Adventist University

Lifelines - Biology Department Newsletter

The Fall 2010 issue of Lifelines contains articles on the Biology Department's display at the General Conference, the addition of Randy Bishop and Dr. Benjamin Thornton to the faculty, and news from the Biology Club.

Global Stability Of An Sir Epidemic Model With Delay And General Nonlinear Incidence, C. Connell Mccluskey

Mathematics Faculty Publications

An SIR model with distributed delay and a general incidence function is studied. Conditions are given under which the system exhibits threshold behaviour: the disease-free equilibrium is globally asymptotically stable if R₀ < 1 and globally attracting if R₀ = 1; if R₀ > 1, then the unique endemic equilibrium is globally asymptotically stable. The global stability proofs use a Lyapunov functional and do not require uniform persistence to be shown a priori. It is shown that the given conditions are satisfied by several common forms of the incidence function.

Wsu Research News, Fall 2010, Office Of Research And Sponsored Programs, Wright State University

WSU Research News

A twenty-four page newsletter of the WSU Research News. The WSU Research News was published monthly beginning in June of 1968 and issued by the Office of Research Development. This newsletter was created to provide information to the WSU faculty about the availability of outside funds for research and educational programs, new developments that may affect availability of funds, and general information on research and educational activities at Wright State University.

Macalester Today Fall 2010, Macalester College

Macalester Today

No abstract provided.

Vol. 35, No. 4: Fall 2010, School Of Medicine & Health Sciences

North Dakota Medicine Archive

No abstract provided.

Taking Science To The People, Carolyn Johnsen

University of Nebraska Press: Sample Books and Chapters

The American public, government, and the news media continually grapple with myriad policy issues related to science and technology. Those issues include global warming, energy, stem-cell research, health care, childhood autism, food safety, and genetics, to name but a few. When the public is informed on such topics, chances improve for reasoned policy decisions. Journalists have typically bridged the gap between scientists and the public, but the times now call for more engagement from the experts. The authors in this collection write convincingly about why scientists and engineers should shake off their ivory-tower reticence and take science to the people. …

Nationwide Acute Care Physical Therapist Practice Analysis Identifies Knowledge, Skills, And Behaviors That Reflect Acute Care Practice, Sharon L. Gorman, Ellen Wruble Hakim, Wendy Johnson, Sujoy Bose, Katherine S. Harris, Molly H. Crist, Karen Holtgrefe, Jennifer M. Ryan, Michael S. Simpson, Jean Bryan Coe

Physical Therapy Faculty Research

Background and Purpose. Acute care physical therapists have experienced the effects of dramatic changes in health care reimbursement systems and population demographics. Acute care hospitals now serve a patient population of much older, chronically ill patients who are hospitalized for shorter periods of time in a practice environment in which physical therapy staffing resources are often inadequate. The purposes of this study were to document common experiences in the practice of acute care physical therapy and to identify differences in the perceptions of physical therapists with varying levels of experience and in various sizes of acute care facilities.

Subjects …

Uab Nursing - Fall 2010, University Of Alabama At Birmingham

UAB Nursing magazine

No abstract provided.

Benchmarks 2010, October 15, The Rockefeller University

BenchMarks 2010

BenchMarks. Friday, October 15, 2010

The community newsletter of The Rockefeller University

BenchMarks is published monthly and is distributed on the campus of The Rockefeller University. It produced by the Office of Communications and Public Affairs

Akhuwat Issue No. 79, Aga Khan University

AKHUWAT Newsletters

• Patient Centered Care
• AKU-ISMC
• Dashboard of Clinical and Managerial Indicators
• Face to Face with Dr. Robert Armstrong Dean
• Medical College East Africa
• AKU-IED
• Happenings
• Construction
• Proud to Announce
• Appreciation Evening
• About Our Greatest Assets

The International Review | 2010 Fall, Michael Rhee

The International Review Newsletter

Protecting animal welfare: Overview and future prospects

Does greater use of criminal law prevent the spread of HIV?

“Vulture Funds”: Preying on poor countries or pursuing deadbeat nations

Protecting migrant workers: The legal framework and status of debate

“Ideological exclusion”: Keeping out people who don’t share your views?

Asylum in the United States for foreign homeschoolers?

Does Arizona’s anti-illegal immigrant law violate international law?

Kosovo: A license for more independence days around the world?

The crime of aggression on the slow road to becoming a crime

Gulf of Mexico oil leak: Any role for international law?

More protection for salamanders, …

Nepa In The Hot Seat: A Proposal For An Office Of Environmental Analysis, Aliza M. Cohen

University of Michigan Journal of Law Reform

Judicial deference under the National Environmental Policy Act (NEPA) can be problematic. It is a well-established rule of administrative law that courts will grant a high degree of deference to agency decisions. They do this out of respect for agency expertise and policy judgment. This deference is applied to NEPA lawsuits without acknowledging the special pressures that agencies face while assessing the environmental impacts of their own projects. Though there is a strong argument that these pressures undermine the reasons for deferential review, neither the statute nor the courts have provided plaintiffs with adequate means to remedy this problem. Agency …

Orange & White - Fall 2010, University Of Texas At Brownsville, Texas Southmost College

UTB/TSC Archives - Orange & White Magazine

No abstract provided.