Digital Commons Network^™

Structure And Mechanism Of The Genomically Encoded Fosfomycin Resistance Protein, Fosx, From Listeria Monocytogenes, Kerry L. Fillgrove, Svetlana Pakhomova, Matthew R. Schaab, Marcia E. Newcomer, Richard N. Armstrong

Faculty Publications

The fosfomycin resistance protein, FosX, catalyzes the hydration of the antibiotic fosfomycin, (1R,25)-epoxypropylphosphonic acid. Genes encoding the enzyme are found in several pathogenic microorganisms. The structure and mechanism of action of the genomically encoded FosX enzyme from Listeria monocytogenes (FosXLMATCC) obtained from the American Type Culture Collection are reported. The gene harbors 31 point mutations, and as a consequence, the protein differs in 10 amino acid residues from the previously reported FosX encoded in the genome of the EGD strain of L. monocytogenes (FosXLMEGD). The FosXLMATCC enzyme is shown to catalyze the addition of water to the C1 position of …

Synthesis And Antiviral Evaluation Of Some 3'-Carboxymethyl-3'-Deoxyadenosine Derivatives, Houguang Shi

Theses and Dissertations

3'-Carboxymethyl-3'-deoxyadenosine derivatives were prepared from 2'-O-TBDMS-3'-deoxy-3'-[(ethoxycarbonyl)methyl]adenosine (1) via simple and efficient procedures. Conversion of 1 to 5'-azido-2'-O-TBDMS-3', 5'-dideoxy -3'-[(ethoxycarbonyl) methyl] adenosine (4) was accomplished via a novel one-pot method employing 5'-activation (TosCl) followed by efficient nucleophilic displacement with tetramethylguanidinium azide. Compound 4 was converted to a 5'-[(N-methylcarbamoyl)amino] derivative (5) via one-pot reduction/acylation employing H2/Pd-C followed by treatment with p-nitrophenyl N-methylcarbamate. The latter step of this two-step process required an efficient source of p-nitrophenyl N-methylcarbamate, thus a highly efficient new method for preparing p-nitrophenyl N-alkylcarbamate was developed. N6-phenylcarbamoyl groups were introduced by treatment with phenylisocyanate, and an efficient new method for …

Transendothelial Migration Of Metastatic Cancer Under The Influence Of Cigarette Smoke Condensate, Daniel Opp

USF Tampa Graduate Theses and Dissertations

Cigarette smoke's influence on cancer has primarily been a subject of epidemilogic and tumorigenic studies. There have been no proper investigations with interests focused on how cigarette smoke affects the cellular mechanics of metastasis. Gathering an understanding of how smoke influences metastatic invasion could be vital in regulating or possibly eliminatings cancer's ability to initiate new tumor growth sites. This project focuses on cigarette smoke's influence on cellular mechanics of endothelial cells, and the invasive potential of cancer against a fully active endothelium. It is already known that cigarette smoke has a carcinogenic effect, but it is hypothesized that the …

Current, July 09, 2007, University Of Missouri-St. Louis

Current (2000s)

Orientation Issue

Central Florida Future, Vol. 39 No. 99, July 9, 2007

Central Florida Future

Tallahassee turmoil; Strong support for stem cells; Convocation Center will open by fall.

Strawberry Plains Provides Unique Research For Um Faculty, Students, Lydia Hailman

University of Mississippi News

OXFORD, Miss. - Faculty and students at the University of Mississippi are benefiting from a nearby natural preserve where they can conduct a wide variety of research projects that tie together nature and history.

July 9, 2007 Reporter, University Of Alabama At Birmingham

eReporter (campus newsletter)

No abstract provided.

Board Of Directors Meeting Minutes (July 9, 2007), Dmacc

Board of Directors Meeting Minutes

This file contains the minutes from the Des Moines Area Community College Board meeting held on July 9, 2007.

Space Suit Concepts And Vehicle Interfaces For The Constellation Program, D. M. Klaus, J. Metts, R. Kobrick, M. Mesloh, T. Monk, Et Al.

Publications

In carrying out NASA’s Vision for Space Exploration, a number of different environments will be encountered that will require the crew to wear a protective space suit. Specifically, four suited mission phases are identified as Launch, Entry & Abort profiles, Contingency 0g (orbital) Extravehicular Activity (EVA), Lunar Surface EVA and Martian Surface EVA. This study presents conceptual design solutions based on a previous architecture assessment that defined space suit operational requirements for four proposed space suit configuration options. In addition, a subset of vehicle interface requirements are defined for enabling umbilical and physical connections between the suits and the various …

Description Of The Tadpole Of Leptodactylus Pustulatus Peters, 1870 (Anura: Leptodactylidae), Rafael O. De Sá, Reuber Brandão, Lorena Dall'ara Guimarães

Biology Faculty Publications

The external morphology and oral disc of the tadpole of Leptodactylus pustulatus Peters, 1870, are described and illustrated for Gosner stage 39. The internal oral anatomy was analyzed with SEM at Gosner stage 36 whereas chondrocranial anatomy is reported for Gosner stage 35. The overall characteristics do not depart from those known for the genus Leptodactylus and they particularly agree for those of the melanonotus species group. The labial tooth row formula is 2(2)/3. Observations are presented that suggest that L. pustulatus engages in larval parental care.

Resumo

São descritas a morfologia externa e o disco oral do girino de …

Addressing Sexual Violence Against Youth In Custody, Brenda V. Smith

Presentations

No abstract provided.

Super Learner, Mark J. Van Der Laan, Eric C. Polley, Alan E. Hubbard

U.C. Berkeley Division of Biostatistics Working Paper Series

Previous articles (van der Laan and Dudoit (2003); van der Laan et al. (2006); Sinisi et al. (2007)) advertised and theoretically validated the use of cross-validation to select among many candidate estimators to compute a so called super learner which outperforms any of the given candidate estimators. The theoretical basis was provided for this super learner based on oracle results for the cross-validation selector (e.g., van der Laan and Dudoit (2003); van der Laan et al. (2006)) and in Sinisi et al. (2007). In addition, these papers contained a practical demonstration of the adaptivity of this so called super learner …

Mammalian Cell Cytotoxicity Analysis Of Soybean Rust Fungicides, Steven L. Daniel, G. L. Hartman, E. D. Wagner, M. J. Plewa

Faculty Research & Creative Activity

The identification of soybean rust, caused by Phakopsora

pachyrhizi H. Sydow & Sydow, in the southern United

States in November 2004 (Schneider et al. 2005 ), in the

Midwest in 2006 (Hartman et al. 2007 ), and elsewhere has

increased the concerns of the impact of the pathogen on US

soybean production (Miles et al. 2007 ). The rapid spread of

P. pachyrhizi and its potential to cause severe yield losses

makes this among the most destructive foliar diseases of

soybean. Yield losses of 20%–60% were reported in Asia,

with losses of 80% reported from experimental plots in

Taiwan (Hartman …

Ultrasonically-Assisted Drug Delivery In Rats Reduces Tumor Growth, William G. Pitt, Beverly L. Roeder, G. Bruce Schaalje, Bryant J. Staples

Faculty Publications

Previously we have shown that nanosized drug carriers called Plurogels™ sequestered Doxorubicin (Dox) and partially released this drug with application of ultrasound (US) (Fig. 1)1. The application to chemotherapy was successfully demonstrated in a rat tumor model2. However previous studies did not examine the distribution of Dox in the insonated and control tissue. This recent work investigated the effect of two US frequencies and examined the Dox distribution in the insonated and control tumors to determine if US was depositing more Dox at the insonated site.

On The Green Vol. 37 No. 15 July 6, 2007, Gallaudet University

2001-2010

On the Green is an internal publication of Gallaudet College, which later became Gallaudet University. It notified employees of updates around the campus and in the broader community, including new construction and the establishment of new academic programs. Running until 2010, it was supplanted by various forms of online mass communications across multiple audiences.

Sampling Daphnia's Expressed Genes: Preservation, Expansion And Invention Of Crustacean Genes With Reference To Insect Genomes, John K. Colbourne, Brian D. Eads, Joseph Shaw, Elizabeth Bohuski, Darren J. Bauer, Justen Andrews

Hubbard Center for Genome Studies (HCGS)

Background

Functional and comparative studies of insect genomes have shed light on the complement of genes, which in part, account for shared morphologies, developmental programs and life-histories. Contrasting the gene inventories of insects to those of the nematodes provides insight into the genomic changes responsible for their diversification. However, nematodes have weak relationships to insects, as each belongs to separate animal phyla. A better outgroup to distinguish lineage specific novelties would include other members of Arthropoda. For example, crustaceans are close allies to the insects (together forming Pancrustacea) and their fascinating aquatic lifestyle provides an important comparison for understanding the …

Maintaining Phase Of The Tri-Phasic Crab Pyloric Rhythm, Christina Mouser, Farzan Nadim, Amitabha Bose

Publications and Research

No abstract provided.

The Murray Ledger And Times, July 6, 2007, The Murray Ledger And Times

The Murray Ledger & Times

No abstract provided.

Development Of Deployable Wings For Small Unmanned Aerial Vehicles Using Compliant Mechanisms, Steven D. Landon

Theses and Dissertations

Unmanned Air Vehicles (UAVs) have recently gained attention due to their increased ability to perform sophisticated missions with less cost and/or risk than their manned counterparts. This thesis develops approaches to the use of compliant mechanisms in the design of deployable wings for small UAVs. Although deployable wings with rigid-link mechanisms have been used in the past to maintain flight endurance while minimizing required storage volume, compliant mechanisms offer many advantages in manufacturability and potential space savings due to function sharing of components. A number of compliant, deployable wing concepts are generated and a classification system for them is formed. …

Sensitivity To Distributional Assumptions In Estimation Of The Odp Thresholding Function, Wendy Jill Bunn

Theses and Dissertations

Recent technological advances in fields like medicine and genomics have produced high-dimensional data sets and a challenge to correctly interpret experimental results. The Optimal Discovery Procedure (ODP) (Storey 2005) builds on the framework of Neyman-Pearson hypothesis testing to optimally test thousands of hypotheses simultaneously. The method relies on the assumption of normally distributed data; however, many applications of this method will violate this assumption. This thesis investigates the sensitivity of this method to detection of significant but nonnormal data. Overall, estimation of the ODP with the method described in this thesis is satisfactory, except when the nonnormal alternative distribution has …

Sampling Daphnia's Expressed Genes: Preservation, Expansion And Invention Of Crustacean Genes With Reference To Insect Genomes, John K. Colbourne, Brian D. Eads, Joseph Shaw, Elizabeth Bohuski, Darren Bauer, Justen Andrews

Dartmouth Scholarship

Functional and comparative studies of insect genomes have shed light on the complement of genes, which in part, account for shared morphologies, developmental programs and life-histories. Contrasting the gene inventories of insects to those of the nematodes provides insight into the genomic changes responsible for their diversification. However, nematodes have weak relationships to insects, as each belongs to separate animal phyla. A better outgroup to distinguish lineage specific novelties would include other members of Arthropoda. For example, crustaceans are close allies to the insects (together forming Pancrustacea) and their fascinating aquatic lifestyle provides an important comparison for understanding the genetic …

Vol.35 N.07 July 5th 2007, Brown Publishing Company

Black Voice News

No abstract provided.

Commonwealth Times 2007-07-05

Commonwealth Times, 1969-

No abstract provided.

Pleasant Point Sewer Extension, City Of Portsmouth

PREP Reports & Publications

The City of Portsmouth (City) is located in Rockingham County at the mouth of the Piscataqua River in the seacoast area of New Hampshire. The City of Portsmouth’s sewerage system consists of approximately 115 miles of sewers (excluding the Pease International Tradeport), 19 pumping stations, and a 4.8 million gallon per day (mgd) primary wastewater treatment facility (WWTF) located on Peirce Island. The City has an inter-municipal agreement with the Town of New Castle, an island to the northeast of Portsmouth, to treat their wastewater at the City’s Peirce Island WWTF. Additionally, the City has entered into a long-term Municipal …

Volume 44, Number 80: July 05, 2007, University Of North Dakota

University Letter Archive

No abstract provided.

Campus Report July 5, 2007

News Releases

No abstract provided.

Post Hoc Pattern Matching: Assigning Significance To Statistically Defined Expression Patterns In Single Channel Microarray Data, Randall Hulshizer, Eric M. Blalock

Pharmacology and Nutritional Sciences Faculty Publications

BACKGROUND: Researchers using RNA expression microarrays in experimental designs with more than two treatment groups often identify statistically significant genes with ANOVA approaches. However, the ANOVA test does not discriminate which of the multiple treatment groups differ from one another. Thus, post hoc tests, such as linear contrasts, template correlations, and pairwise comparisons are used. Linear contrasts and template correlations work extremely well, especially when the researcher has a priori information pointing to a particular pattern/template among the different treatment groups. Further, all pairwise comparisons can be used to identify particular, treatment group-dependent patterns of gene expression. However, these approaches …

As We See It: Ecosystem Services Related To Oyster Restoration, Loren D. Coen, Robert D. Brumbaugh, David Bushek, Raymond E. Grizzle, Mark W. Luckenbach, Martin H. Posey, Sean P. Powers, S. Gregory Tolley

Jackson Estuarine Laboratory

The importance of restoring filter-feeders, such as the Eastern oyster Crassostrea virginica, to mitigate the effects of eutrophication (e.g. in Chesapeake Bay) is currently under debate. The argument that bivalve molluscs alone cannot control phytoplankton blooms and reduce hypoxia oversimplifies a more complex issue, namely that ecosystem engineering species make manifold contributions to ecosystem services. Although further discussion and research leading to a more complete understanding is required, oysters and other molluscs (e.g. mussels) in estuarine ecosystems provide services far beyond the mere top-down control of phytoplankton blooms, such as (1) seston filtration, (2) benthic–pelagic coupling, (3) creation of refugia …

Catecholaminergic Control Of Mitogen-Activated Protein Kinase Signaling In Paraventricular Neuroendocrine Neurons In Vivo And In Vitro: A Proposed Role During Glycemic Challenges, Arshad Khan, Todd Ponzio, Graciela Sanchez-Watts, B. Stanley, Glenn Hatton, Alan Watts

Selected Works Temporary Series

No abstract provided.

Catecholaminergic Control Of Mitogen-Activated Protein Kinase Signaling In Paraventricular Neuroendocrine Neurons In Vivo And In Vitro: A Proposed Role During Glycemic Challenges, Khan, Todd Ponzio, Graciela Sanchez-Watts, B. Stanley, Glenn Hatton, Alan Watts

Departmental Papers (Biology)

No abstract provided.