Digital Commons Network^™

Histological Changes In The Target Organs Of Channa Punctatus After Exposure To Anthraquinone Vat Dyes, Rajee Olaganathan, Jamila Patterson

Publications

The present study is an attempt on histopathology of gill, liver, kidney and intestine of Channa punctatus after exposure to sublethal concentrations of anthraquinone vat dyes viz., vat blue 4 and vat green 1. The dyes has been found to produce several damages in the vital organs of C. punctatus leading to various lesions like extensive lamellar hypertrophy with some proliferation at the base of secondary lamellae and hyperplasia of intercellular epithelial cells in the gill; fat accumulation, hepatic necrosis, aggregation of polymorphonuclear leucocytes, hepatocellular degeneration and aggregation of hepatocytes in liver; while in kidney it caused hyperplastic of the …

Four Events Of Host Switching In Aspidoderidae (Nematoda) Involve Convergent Lineages Of Mammals, F Agustin Jimenez-Ruiz, Scott L Gardner, Graciela Navone, Guillermo Ortí

Publications

The Great American Interchange resulted in the mixing of faunistic groups with different origins and evolutionary trajectories that underwent rapid diversification in North and South America. As a result, groups of animals of recent arrival converged into similar habits and formed ecological guilds with some of the endemics. We present a reconstruction of the evolutionary events in Aspidoderidae, a family of nematodes that infect mammals that are part of this interchange, i.e., dasypodids, opossums, and sigmodontine, geomyid, and hystricognath rodents. By treating hosts as discrete states of character and using parsimony and Bayesian inferences to optimize these traits into the …

Application Essays As An Effective Tool For Assessing Instruction In The Basic Communication Course: A Follow-Up Study, Joseph P. Mazer, Cheri J. Simonds, Stephen K. Hunt

Publications

The assessment of student learning in general education courses is of critical importance in higher education. This study examines the utility of a writing assignment (application essays) in a basic communication course as an effective assessment tool. The authors conducted a content analysis of student portfolios to determine the extent to which application essays provide evidence of student learning in the basic course. The present study extends the findings from recent assessment efforts (Jones, Simonds, & Hunt, 2005) to explore types of mass media events students address in application essays and assess the revisions made to the assignment based on …

Multi-Color Observations Of Short Grb Afterglows: 20 Events Observed Between 2007 And 2010, A. Nicuesa Guelbenzu, S. Klose, J. Greiner, D. A. Kann, T. Krühler, A. Rossi, S. Schulze, P. M. J. Afonso, J. Elliott, R Filgas, Dieter H. Hartmann, A Kupcu Yoldas, S Mcbreen, M Nardini, F Olivares E., A Rau, S Schmidl, P Schady, V Sudilovsky, A C. Updike, A Yoldas

Publications

We report on follow-up observations of 20 short-duration gamma-ray bursts (GRBs; T90 <2 >s) performed in g'r'i'z' JHKs with the Gamma-Ray Burst Optical Near-Infrared Detector (GROND) between mid-2007 and the end of 2010. This is one of the most compre-hensive data sets on GRB afterglow observations of short bursts published so far. In three cases, GROND was on target within less than 10 min after the trigger, leading to the discovery of the afterglow of GRB 081226A and its faint underlying host galaxy. In addition, GROND was able to image the optical afterglow and follow the light curve evolution in five …

Protein Nano-Object Integrator (Pronoi) For Generating Atomic Style Objects For Molecular Modeling, Nicholas Smith, Brandon Campbell, Lin Li, Chuan Li, Emil Alexov

Publications

Background

With the progress of nanotechnology, one frequently has to model biological macromolecules simultaneously with nano-objects. However, the atomic structures of the nano objects are typically not available or they are solid state entities. Because of that, the researchers have to investigate such nano systems by generating models of the nano objects in a manner that the existing software be able to carry the simulations. In addition, it should allow generating composite objects with complex shape by combining basic geometrical figures and embedding biological macromolecules within the system.

Results

Here we report the Protein Nano-Object Integrator (ProNOI) which allows for …

An Intense Traveling Airglow Front In The Upper Mesosphere–Lower Thermosphere With Characteristics Of A Bore Observed Over Alice Springs, Australia, During A Strong 2 Day Wave Episode, R. L. Walterscheid, J. H. Hecht, L. J. Galinas, Michael P. Hickey Ph.D., I. M. Reid

Publications

The Aerospace Corporation’s Nightglow Imager observed a large step function change in airglow in the form of a traveling front in the OH Meinel (OHM) and O2 atmospheric (O2A) airglow emissions over Alice Springs, Australia, on 2 February 2003. The front exhibited nearly a factor of 2 stepwise increase in the OHM brightness and a stepwise decrease in the O2A brightness. There was significant (~25 K) cooling behind the airglow fronts. The OHM airglow brightness behind the front was among the brightest for Alice Springs that we have measured in 7 years of observations. The event was associated with a …

Translating The Statistical Representation Of The Effects Of Education Interventions Into More Readily Interpretable Forms, Mark W. Lipsey, Kelly Puzio, Cathy Yun, Michael A. Hebert, Kasia Steinka-Fry, Mikel W. Cole, Megan Roberts, Karen S. Anthony, Matthew D. Busick

Publications

This paper is directed to researchers who conduct and report education intervention studies. Its purpose is to stimulate and guide them to go a step beyond reporting the statistics that emerge from their analysis of the differences between experimental groups on the respective outcome variables. With what is often very minimal additional effort, those statistical representations can be translated into forms that allow their magnitude and practical significance to be more readily understood by the practitioners, policymakers, and even other researchers who are interested in the intervention that was evaluated.

Spectral Engineering Of Optical Fiber Preforms Through Active Nanoparticle Doping, T. Lindstrom, E. Garber, D. Edmonson, T. Hawkins, Y. Chen, G. Turri, M. Bass, J. Ballato

Publications

Europium doped alkaline earth fluoride [Eu:AEF2 (AE = Ca, Sr, Ba)] nanoparticles were synthesized and systematically incorporated into the core of modified chemical vapor deposition (MCVD)-derived silica-based preforms by solution doping. The resulting preforms were examined to determine the impact of the nanoparticles chemistry on the spectroscopic behavior of the glass. The dominant existence of Eu3+ was demonstrated in all preforms, which is in contrast to conventional solution doped preforms employing dissolved europium salts where Eu2+ is primarily observed. Raman spectroscopy and fluorescence lifetime measurements indicated that the nanoparticles composition is effective in controlling, at a local chemical and structural …

Radiation From Accelerated Particles In Relativistic Jets With Shocks, Shear-Flow, And Reconnection, K.-I. Nishikawa, P. Hardee, Y. Mizuno, I. Dutan, B. Zhang, M. Medvedev, E. J. Chor, K. W. Min, J. Niemiec, Y Mizuno, A Nordlund, J T. Frederiksen, H Sol, M Pohl, Dieter H. Hartmann

Publications

We have investigated particle acceleration and shock structure associated with an unmagnetized rel-ativistic jet propagating into an unmagnetized plasma for electron-positron and electron-ion plasmas. Strong magnetic fields generated in the trailing jet shock lead to transverse deflection and acceleration of the electrons. We have self-consistently calculated the radiation from the electrons accelerated in the turbulent magnetic fields for different jet Lorentz factors. We find that the synthetic spectra depend on the bulk Lorentz factor of the jet, the jet temperature, and the strength of the magnetic fields generated in the shock. We have investigated the generation of magnetic fields associated …

An Infrastructure To Support Data Integration And Curation For Higher Educational Research, Linh B. Ngo, Amy W. Apon, Pengfei Xuan, Kimberley Ferguson, Christin Marshall, John Mccann, Yueli Zheng

Publications

The recent challenges for higher education call for research that can offer a comprehensive understanding about the performance and efficiency of higher education institutions in their three primary missions: research, education, and service. In other for this to happen, it is necessary for researchers to have access to a multitude of data sources.However, due to the nature of their academic training, many higher education practitioners do not have access to expertise in working with different data sources. In this work, we describe a design and implementation for an infrastructure that will bring together the tools and the data to provide …

Sensitivity Of Limiting Hurricane Intensity To Ocean Warmth, James B. Elsner, Sarah Strazzo, Jill C. Trepanier, Thomas H. Jagger

Publications

No abstract provided.

A Deep Search For Host Galaxies Of Grbs With No Detected Optical Afterglow, A. Rossi, S. Klose, P. Ferrero, J. Greiner, L. A. Arnold, E. Gonslaves, Dieter H. Hartmann, A. C. Updike, D. A. Kann, T. Krühler

Publications

Context. Gamma-ray bursts (GRBs) can provide information about star formation at high redshifts. Even in the absence of a bright optical/near-infrared/radio afterglow, the high detection rate of X-ray afterglows by Swift/XRT and its localization precision of 2–3 arcsec facilitates the identification and the study of GRB host galaxies. Aims. We focus on the search for the host galaxies of 17 bursts with arcsec-sized XRT error circles but no detected long-wavelength afterglow, in spite of their deep and rapid follow-up observations. Three of these events can also be classified as truly dark bursts, i.e., the observed upper limit on the optical …

Highly Efficient And Exact Method For Parallelization Of Grid-Based Algorithms And Its Implementation In Delphi, Chuan Li, Lin Li, Jie Zhang, Emil Alexov

Publications

The Gauss–Seidel (GS) method is a standard iterative numerical method widely used to solve a system of equations and, in general, is more efficient comparing to other iterative methods, such as the Jacobi method. However, standard implementation of the GS method restricts its utilization in parallel computing due to its requirement of using updated neighboring values (i.e., in current iteration) as soon as they are available. Here, we report an efficient and exact (not requiring assumptions) method to parallelize iterations and to reduce the computational time as a linear/nearly linear function of the number of processes or computing units. In …

Biodegradation Of Textile Dye Anthraquinone Vat Blue 4 By Pseudomonas Aeruginosa, Rajee Olaganathan, Jamila Patterson

Publications

Uncontaminated and Vat blue 4 contaminated soil were screened for heterotrophic bacterial population and the bacterial density were found to be 19.3 X 104 and 5.5 X 104 CFU/gm respectively. The bacterial genera of dye contaminated soil was dominated by Pseudomonas sp. (32.5 %) followed by Bacillus sp. (27.5 %), Aeromonas sp. (15.0 %), Micrococcus sp. (12.5 %) and Achromobacter sp. (12.5 %). The optimum inoculums load, pH and temperature were found to be 5%, 7 and 35oC respectively. The initial pH of the effluent prepared using Vat Blue 4 was 8.5. The free cells of P. aeruginosa reduced the …

A Genome-Wide Over-Expression Screen Identifies Genes Involved In Phagocytosis In The Human Protozoan Parasite, Entamoeba Histolytica, Ada V. King, Brenda H. Welter, Amrita B. Koushik, Lindsay N. Gordon, Lesly A. Temesvari

Publications

Functional genomics and forward genetics seek to assign function to all known genes in a genome. Entamoeba histolytica is a protozoan parasite for which forward genetics approaches have not been extensively applied. It is the causative agent of amoebic dysentery and liver abscess, and infection is prevalent in developing countries that cannot prevent its fecal-oral spread. It is responsible for considerable global morbidity and mortality. Given that the E. histolytica genome has been sequenced, it should be possible to apply genomic approaches to discover gene function. We used a genome-wide over-expression screen to uncover genes regulating an important virulence function …

On The Cyclically Fully Commutative Elements Of Coxeter Groups, T. Boothby, J. Burket, M. Eichwald, D. C. Ernst, R. M. Green, Matthew Macauley

Publications

Let W be an arbitrary Coxeter group. If two elements have expressions that are cyclic shifts of each other (as words), then they are conjugate (as group elements) in W. We say that w is cyclically fully commutative (CFC) if every cyclic shift of any reduced expression for w is fully commutative (i.e., avoids long braid relations). These generalize Coxeter elements in that their reduced expressions can be described combinatorially by acyclic directed graphs, and cyclically shifting corresponds to source-to-sink conversions. In this paper, we explore the combinatorics of the CFC elements and enumerate them in all Coxeter groups. …

The Gaise College Report: The American Statistical Association Meets Sound Pedagogy In Central Virginia, Beverly Wood

Publications

Research in undergraduate statistics education often centers on the introductory course required for a large percentage of college students. While acknowledging the diverse setting, audience, and purpose of introductory courses, existing research assumes that courses offered by different disciplines share the same goals and teaching practices. The purpose of this study is to examine the objectives for student outcomes and pedagogical delivery of introductory statistics courses in various academic departments to provide explicit evidence for this assumption. The American Statistical Association’s Guidelines for Assessment and Instruction in Statistics Education (GAISE) are meant to apply to all introductory courses. The College …

The Gas/Dust Ratio Of Circumstellar Disks: Testing Models Of Planetesimal Formation, David Horne, Erika Gibb, Terrence W. Rettig, Sean D. Brittain, David Tilley, Dinshaw Balsara

Publications

We present high-resolution, near-infrared NIRSPEC observations of CO absorption toward six class II T Tauri stars: AA Tau, DG Tau, IQ Tau, RY Tau, CW Tau, and Haro 6–5b. 12CO overtone absorption lines originating from the circumstellar disk of each object were used to calculate line-of-sight gas column densities toward each source. We measured the gas/dust ratio as a function of disk inclination, utilizing measured visual extinctions and inclinations for each star. The majority of our sources show further evidence for a correlation between the gas/dust columndensity ratio and disk inclination similar to that found by Rettig et al.

The Influence Of Automation On Aviation Accident And Fatality Rates: 2000-2010, Nicholas A. Koeppen

Publications

The purpose of this project is to evaluate if technological advances and implementation of automation have produced a decrease in the number and severity of accidents in commercial aviation over the last decade. To accomplish this evaluation historical commercial aviation accident data from 2000 to 2010 will be examined. Commercial fixed wing and rotary wing data will be evaluated. No aviation incident data will be collected; the project will be limited in scope to commercial aviation accidents. Accidents highlighting major deficiencies involving automation will be discussed in detail. To further support the projects purpose, emphasis will be given to evaluate …

Ionospheric Signatures Of Tohoku-Oki Tsunami Of March 11, 2011: Model Comparisons Near The Epicenter, David A. Galvan, Attila Komjathy, Michael P. Hickey, Philip Stephens, Jonathan Snively, Y. Tony Song, Mark D. Butala, Anthony J. Mannucci

Publications

We observe ionospheric perturbations caused by the Tohoku earthquake and tsunami of March 11, 2011. Perturbations near the epicenter were found in measurements of ionospheric total electron content (TEC) from 1198 GPS receivers in the Japanese GEONET network. For the first time for this event, we compare these observations with the estimated magnitude and speed of a tsunami-driven atmospheric gravity wave, using an atmosphere-ionosphere-coupling model and a tsunami model of sea-surface height, respectively. Traveling ionospheric disturbances (TIDs) were observed moving away from the epicenter at approximate speeds of 3400 m/s, 1000 m/s and 200–300 m/s, consistent with Rayleigh waves, acoustic …

Elastic Properties Of The Zintl Ferromagnet Yb14mnsb11, Sriparna Bhattacharya, D C. Marinescu, James R. Morris, Ivan A. Sergienko, Brian Sales, David Madrus, Veerle Keppens

Publications

We report measurements of the elastic moduli as a function of temperature (5–300) K and magnetic field (0–2 T) for the Zintl ferromagnet Yb14MnSb11, which is believed to be a rare example of an underscreened Kondo lattice. The elastic moduli measured below the Curie temperature in this complex ferromagnet exhibit unusual lattice stiffening that is independent of the magnetic field and can be adequately modeled using the Landau theory.

Vision-Based Tracking Of A Dynamic Target With Application To Multi-Axis Position Control, Carlos A. Montes, Chan Wong, John C. Ziegert, Laine Mears

Publications

Two sub-pixel resolution approaches to measure in-plane displacements and in-plane rotation of a known target, through image processing, are described in this research. A dynamic known target is displayed on a pixel grid, which is attached to one end of the kinematic chain of an XYθZ stage; the latter represents the experimental testbed. At the other end of the kinematic chain, a digital monochrome camera is fixed to the bottom of the stage and provides 3D position information used as the feedback signal to the vision-based control system in charge of the tool’s motion. The illuminated pixels on the display …

Model Of A Mechanical Clock Escapement, John Wagner, David Moline, Eugene Vold

Publications

The mechanical tower clock originated in Europe during the 14th century to sound hourly bells and later display hands on a dial. An important innovation was the escapement mechanism, which converts stored energy into oscillatory motion for fixed time intervals through the pendulum swing. Previous work has modeled the escapement mechanism in terms of inelastic and elastic collisions. We derive and experimentally verify a theoretical model in terms of impulsive differential equations for the Graham escapement mechanism in a Seth Thomas tower clock. The model offers insight into the clock’s mechanical behavior and the functionality of the deadbeat escapement mechanism.

Herschel/Pacs Observations Of Young Sources In Taurus: The Far-Infrared Counterpart Of Optical Jets, L Podio, I Kamp, D Flower, C Howard, G Sandell, A Mora, G Aresu, Sean D. Brittain, W.R.F. Dent, C Pinte, G J. White

Publications

Context. Observations of the atomic and molecular line emission associated with jets and outflows emitted by young stellar objects provide sensitive diagnostics of the excitation conditions, and can be used to trace the various evolutionary stages they pass through as they evolve to become main sequence stars. Aims. To understand the relevance of atomic and molecular cooling in shocks, and how accretion and ejection efficiency evolves with the evolutionary state of the sources, we will study the far-infrared counterparts of bright optical jets associated with Class I and II sources in Taurus (T Tau, DG Tau A, DG Tau B, …

Evaluation And Development Of Unmanned Aircraft (Uav) For Udot Needs, Steven L. Barfuss, Austin Jensen, Shannon Clemens

Publications

This research involved the use of high-resolution aerial photography obtained from Unmanned Aerial Vehicles (UAV) to aid the Utah Department of Transportation (UDOT) in monitoring and documenting State Roadway structures and associated issues. Using geo-referenced UAV high resolution aerial photographic imagery, the project documented the before, during and after stages of the Southern Parkway construction near the new Saint George International airport, in addition to photographing and classifying wetland plant species in the Utah Lake wetland mitigation bank on the North East corner of Utah Lake.

Observed Seasonal Variations In Exospheric Effective Temperatures, E. J. Mierkiewicz, F. L. Roesler, S. M. Nossal

Publications

High spectral resolution line profile observations indicate a reproducible semi-annual variation in the geocoronal hydrogen Balmer α effective temperature. These observations were made between 08 January 2000 and 21 November 2001 from Pine Bluff Observatory (WI) with a second generation double etalon Fabry-Perot annular summing spectrometer operating at a resolving power of 80,000. This data set spans sixty-four nights of observations (1404 spectra in total) over 20 dark-moon periods. A two cluster Gaussian model fitting procedure is used to determine Doppler line widths, accounting for fine structure contributions to the line, including those due to cascade; cascade contributions at Balmer …

Assessing Technological Literacy Of Middle School Students, Lawrence E. Whitman, Mandy C. Phelps, Karen V. Reynolds, Barbara S. Chaparro

Publications

Project Lead the Way (PLTW) is a rigorous and relevant pre-engineering curriculum implemented in middle schools and high schools throughout the United States. PLTW has a hands-on approach using activities and project-based learning. The College of Engineering at Wichita State University has partnered with three local school districts to implement the PLTW program to increase interest in Science, Technology, Engineering and Mathematics (STEM). This study begins to assess the impact of the PLTW program on student perceptions and attitudes toward engineering and technology as part of an ongoing three-year assessment. A pre- and post-assessment were administered to middle school students …

Ionospheric Plasma Transport And Loss In Auroral Downward Current Regions, M. Zettergren, J. L. Semeter

Publications

A detailed study of the effects of auroral current systems on thermal ionospheric plasma transport and loss is conducted using a new ionospheric model. The mathematical formulation of the model is a variation on the 5‐moment approximation which describes the temporal evolution of density, drift, and temperature for five different ion species in two spatial dimensions. The fluid system is closed through a 2‐D electrostatic treatment of the auroral currents. This model is used to examine the interplay between ion heating, perpendicular transport, molecular ion generation, and type‐1 ion upflows in a self‐consistent way for the first time. Simulations confirm …

Topological Thermoelectric Effects In Spin-Orbit Coupled Electron- And Hole-Doped Semiconductors, E Dumitrescu, Chuanwei Zhang, D C. Marinescu, Sumanta Tewari

Publications

We compute the intrinsic contributions to the Berry-phase mediated anomalous Hall and Nernst effects in electron- and hole-doped semiconductors in the presence of an in-plane magnetic field as well as Rashba and Dresselhaus spin-orbit couplings. For both systems we find that the regime of chemical potential which supports the topological superconducting state in the presence of the superconducting proximity effect can be characterized by plateaus in the topological Hall and Nernst coefficients flanked by well-defined peaks marking the emergence of the topological regime. The plateaus arise from a clear momentum space separation between the region where the Berry curvature is …

Predicting Nonspecific Ion Binding Using Delphi, Marharyta Petukh, Maxim Zhenirovskyy, Chuan Li, Lin Li, Lin Wang, Emil Alexov

Publications

Ions are an important component of the cell and affect the corresponding biological macromolecules either via direct binding or as a screening ion cloud. Although some ion binding is highly specific and frequently associated with the function of the macromolecule, other ions bind to the protein surface nonspecifically, presumably because the electrostatic attraction is strong enough to immobilize them. Here, we test such a scenario and demonstrate that experimentally identified surface-bound ions are located at a potential that facilitates binding, which indicates that the major driving force is the electrostatics. Without taking into consideration geometrical factors and structural fluctuations, we …