Digital Commons Network^™

Irreducible Representations From Group Actions On Trees, Charlie Liou

Master's Theses

We study the representations of the symmetric group $S_n$ found by acting on

labeled graphs and trees with $n$ vertices. Our main results provide

combinatorial interpretations that give the number of times the irreducible

representations associated with the integer partitions $(n)$ and $(1^n)$ appear

in the representations. We describe a new sign

reversing involution with fixed points that provide a combinatorial

interpretation for the number of times the irreducible associated with the

integer partition $(n-1, 1)$ appears in the representations.

Alzheimer’S Detection With The Discrete Wavelet Transform And Convolutional Neural Networks, Melissa N. Nardone

Master's Theses

Alzheimer’s disease slowly destroys an individual’s memory, and it is estimated to impact more than 5.5 million Americans. Over time, Alzheimer’s disease can cause behavior and personality changes. Current diagnosis techniques are challenging because individuals may show no clinical signs of the disease in the initial stages. As of today, there is no cure for Alzheimer’s. Therefore, symptom management is key, and it is critical that Alzheimer’s is detected early before major cognitive damage.

The approach implemented in this thesis explores the idea of using the Discrete Wavelet Transform (DWT) and Convolutional Neural Networks (CNN) for Alzheimer’s detection. The neural …

Beef Bull Selection And Management Affecting Breeding Season Outcomes For California Cattle Producers On Rangelands, Megan Banwarth

Master's Theses

California’s approximately 660,000 head of beef cattle are highly dependent on range bulls used to produce offspring that can perform across the state’s diverse ecological regions. While knowledge of bull breeding behavior and the technology used to monitor cattle movement and behavior is critical to maximize conception rates and the overall efficiency in natural service sires on rangelands. Bulls need to be functional on rugged coastal landscapes, rolling foothills, deserts, and in high-elevation terrain. Few data exist that indicate factors related to selection, maintenance, and longevity of bulls used in rangeland landscapes. Objectives herein, were to assess factors influencing bull …

Dietary Protein Intakes, Distribution Patterns, And Quality In Ncaa Divsion 1 Soccer Players, Jun H. Kwon

Master's Theses

Dietary protein is required to support recovery and adaptation following exercise training. While prior research demonstrates that many athletes meet total daily protein needs, intake seems to be predominantly skewed toward the evening meal. An even distribution of protein doses throughout the course of a day is theorized to confer greater skeletal muscle anabolism compared to a skewed pattern of intake. Protein quality is also an important dietary consideration for athletes, with the amino acid leucine being the primary driver of the postprandial anabolic response. The present thesis investigates the protein consumption characteristics among a selected cohort of NCAA Division …

Panodepth – Panoramic Monocular Depth Perception Model And Framework, Adley K. Wong

Master's Theses

Depth perception has become a heavily researched area as companies and researchers are striving towards the development of self-driving cars. Self-driving cars rely on perceiving the surrounding area, which heavily depends on technology capable of providing the system with depth perception capabilities. In this paper, we explore developing a single camera (monocular) depth prediction model that is trained on panoramic depth images. Our model makes novel use of transfer learning efficient encoder models, pre-training on a larger dataset of flat depth images, and optimizing the model for use with a Jetson Nano. Additionally, we present a training and optimization framework …

Detection Methods, Occupancy Rates, Management And Conservation For Rodents, Jaran Hopkins

Master's Theses

Chapter 1. Species’ occurrences are dependent on a variety of habitat characteristics, including physical landscape factors and anthropogenic land use and change. Understanding the influence of habitat attributes on species occurrence is essential to successful wildlife and habitat management, specifically in areas with active human use. We tested the influence of vegetation alliance, fragmentation, and human recreation in the form of off-highway vehicles (OHV) in an area of active land management in coastal California, with a focus on the occurrences of six small mammal species. The area is composed of sand dunes subject to natural habitat fragmentation. OHV recreation occurs …

Creation And Testing Of A Social Robot Guideline, Sarika L. Singhal

Master's Theses

For this thesis, I created a guideline for socially assistive robots (SARs), and used it to evaluate a reading comprehension based social robot.

To create the guideline I extracted relevant details from published standards about toy safety, radio equipment, electromagnetic compatibility, internet of things security, ethical considerations for human-computer interaction, and data privacy. I then sent a summarized version to experts in the field for feedback. I received seven responses, five of whom were from researchers in academia. The sample size was too small for statistical analysis. Survey responses identified additional areas, such as interactivity and aesthetics, for the guideline. …

Predicting Startup Success Using Publicly Available Data, Emily Gavrilenko

Master's Theses

Predicting the success of an early-stage startup has always been a major effort for investors and venture funds. Statistically, there are about 305 million total startups created in a year, but less than 10% of them succeed to become profitable businesses. Accurately identifying the signs of startup growth is the work of countless investors, and in recent years, research has turned to machine learning in hopes of improving the accuracy and speed of startup success prediction.

To learn about a startup, investors have to navigate many different internet sources and often rely on personal intuition to determine the startup’s potential …

Mediterranean-Style Diet And Exercise Improve Parameters For Management And Prevention Of Type 2 Diabetes Mellitus, Stefani Ann Derrick

Master's Theses

Type 2 diabetes mellitus (T2DM) is a chronic condition recognized as the inability to maintain glucose homeostasis, typically presenting with insulin resistance and systemic inflammation. With the prevalence of T2DM and major risk factors such as prediabetes and obesity increasing each year, there is a crucial need to identify strategies for the management and prevention of this condition. Addressing lifestyle-related risk factors through consumption of a well-balanced, nutritious diet and maintaining regular moderate- to high-intensity physical activity may provide a strategy for improving glycemic control, improving metrics of body composition, and decreasing the inflammatory response associated with metabolic dysregulation. Twenty-two …

From Mesoamerica To Aleppo And Transylvania: The Global Migration Of The Chile Pepper, Arianne M. Peterson, Arianne Peterson

Master's Theses

This thesis explores the migration of the chile pepper, or capsicum anuum, from Mesoamerica into the Old World after 1500, focusing on two case studies of the Aleppo pepper in Syria and paprika in what was once Hungarian Nagyvarad, and which is now Romanian Oradea. Using foodways as a historical lens, and considering the movement of food as historical, it can be seen that the chile pepper, despite its low profit value, illustrates a globalization that existed well before modern times, and it came to cement itself within many different cultures as a symbol of identity. Despite its far-away …

Examining The Moderating Effects Of Adult Social Support On The Relationship Between Adverse Experiences And Psychosocial Adjustment, Zachary Wilde

Master's Theses

Exposure to adverse experiences during childhood place adolescents at a disproportionately high risk of developing physical and mental health problems later in life (Anthony et al., 2019; Basto-Pereira et al., 2016; Brown & Shillington, 2016; Felitti et al., 1998). Further, at-risk adolescents, conceptualized as children and adolescents who lack resources for upward mobility, are more likely to be exposed to adverse experiences and thus are at greater risk for these negative outcomes when compared to adolescents who are not considered at-risk (Fernandes-Alcantara, 2018). To obtain better specificity of what outcomes adverse childhood experiences (ACEs) predict in a sample of vulnerable …

Hypoxic Incubation Chamber, Simone Lisette Helfrich, Makenzie Nicole Jones

Master's Theses

This paper describes the design, manufacturing, and testing of a novel controllable hypoxic incubator with fully functional oxygen gas control and temperature control in a humid environment. On the current market, a majority of the few hypoxic incubators use pre-mixed gas that does not offer precise control over gas concentration. The objective for this project was to create a chamber that allows the user to set the O2 concentration to varying set points of % O2 while maintaining the chamber at a constant body temperature, CO2 level, humidity, and sterility. To start the project, multiple concepts were developed for the …

Quantifying Pain: A Ratio Of Cortisol, Substance P, And Pituitary Adenylate Cyclase-Activating Polypeptide As Biomarkers For Pain In Animal Cruelty And Neglect, Danielle Sherer

Master's Theses

Understanding the relationship between cortisol, Substance P, and PACAP during experienced pain and recovery, as well as the contrast between expression levels and serum levels, will provide an objective measure of pain and suffering to aid in the prosecution of animal cruelty and neglect cases.

There is no consensus at this time as to a recognized biomarker for pain experienced by an animal. Cortisol, Substance P, and Pituitary Adenylate Cyclase-Activating Peptide (PACAP) have been investigated separately in various animal and human studies with regard to stress, pain, and injury. Cortisol is a steroid hormone in the glucocorticoid class that has …

Testing And Verification For The Open Source Release Of The Horizon Simulation Framewortesting And Verification For The Open Source Release Of The Horizon Simulation Framework, William J. Balfour

Master's Theses

Modeling and simulation tools are exceptionally useful for designing aerospace systems because they allow engineers to test and iterate designs before committing the massive resources required for system realization. The Horizon Simulation Framework (HSF) is a time-driven modeling and simulation tool which attempts to optimize how a modeled system could perform a mission profile. After 15 years of development, the HSF team aims to achieve a wider user and developer base by releasing the software open source. To ensure a successful release, the software required extensive testing, and the main scheduling algorithm required protections against new code breaking old functionality. …

Fabrication Of Thin-Film Composite, Reverse-Osmosis Membranes With Polyethylenimine Modifications For Enhancing Membrane Fouling Resistance, Stephanie N. Hamilton

Master's Theses

Increasing water reuse opportunities for communities has become increasingly important as access to clean water is becoming more scarce. Reverse Osmosis (RO) is an advanced treatment technology used in water recycling wastewater for potable reuse applications. RO is a promising technology; however, the membranes have limitations including their high energy demand and their susceptibility to membrane fouling. The main objective of this study was to develop a reproducible method for the fabrication of RO membranes with enhanced flux and reduced susceptibility to fouling. Literature contains numerous publications on fabrication of thin film composite (TFC) RO membranes with high performance. However, …

Effects Of Pier Shading On Salt Marsh Plants In Mississippi, Daniel Taylor

Master's Theses

Saltmarshes are important environments that are valuable to both humans and wildlife. As saltmarshes are under threat from erosion, sea level rise, and human development, efforts should be made to conserve them. The vegetation that occupies these environments are vital to the continued preservation of saltmarshes. This study focuses on one potential threat, the effect that pier shading has on prominent saltmarsh plants of Mississippi, Sporobolus alterniflorus and Juncus roemarianus. Sample piers were selected in the three coastal counties of Mississippi and visited at two time periods (2006 and 2021). I focused on the use of irradiance measurements at …

How Chicago Public Schools Engaged African American Parents In The Closing Of Austin Career Academy High School, Shani Blackwell

Master's Theses

The role of African American parents in education reform initiatives in Chicago is not clearly defined. Local School Councils (LSC) allow parents to make school related decisions in Chicago. But LSCs are removed from decisions about whether or not to place school on or off probation, and whether or not to close schools based on performance or building utilization. In 2013, African American and Latinx parents expressed outrage over the decision by Chicago Public Schools (CPS) to close 49 schools with protests, including a hunger strike by a group of parents, and pleas to the Chicago Board of Education (BOE). …

Bicycling To Level The Field: A Study Of Divvy In Chicago, Bushra Ghaniwala

Master's Theses

With the onset of COVID-19, norms across the world shifted, including the way people moved in major cities. In order to conduct a comparative analysis, understanding transportation habits before COVID-19 hit cities is important. In this paper, I have focused on Divvy bikes in the city of Chicago, which are touted as a means to achieving first- and last-mile transit especially in underserved communities. I am interested in initiating the line of inquiring into who Divvy bikes served during a time when there was major fear around high transmission of COVID-19 on trains and buses due to the close proximity. …

Exploring The Role Of Lactobacillus Jensenii And Lactobacillus Mulieris In The Urogenital Tract, Adriana Daniela Ene

Master's Theses

Lactobacillus is a predominant species of the urogenital tract and it has been found in females with and without lower urinary tract symptoms. The Lactobacillus genus is thought to be beneficial to the host due to its capability to produce hydrogen peroxide, secondary metabolites, and lactic acid. L. jensenii is an organism frequently isolated from the urogenital tract. In March 2020, a new sister taxon of L. jensenii was described, L. mulieris. Shortly thereafter we produced a genomic analysis of all publicly available genomes (n = 43) which reclassified some L. jensenii as L. mulieris. This motivated the in-depth study …

Phylogenetic Relationships Among Fishes In The Order Zeiformes Based On Molecular Data From Three Mitochondrial Loci, Lindsay Scarpitta

Master's Theses

The Zeiformes (dories) are mid-water or deep (to 1000 m) marine acanthomorph fishes with a global, circumtropical, and circumtemperate distribution. Some species have a near-worldwide distribution, while others appear to be regional endemics, e.g., near New Zealand. Six families, 16 genera, and 33 species are currently recognized as valid. Relationships among them, however, remain unsettled, especially in light of recent proposals concerning the phylogenetic placement of zeiforms within the Paracanthopterygii rather than allied with beryciforms or percomorphs. The present study uses mtDNA characters to investigate zeiform interrelationships given their revised phylogenetic placement and attendant changes to their close outgroups, carried …

Polyomavirus Jcpyv And Its Role In The Urinary Tract, Rita Lauren Mormando

Master's Theses

Polyomaviruses are the smallest closed-circular supercoiled double-stranded viruses found in the human microbiota. The polyomavirus JC (JCPyV) is most commonly found within the urinary tract, and prior studies estimate that 20-80% of older adults carry JCPyV. In very rare cases, JCPyV leaves the kidneys, causing progressive multifocal leukoencephalopathy. However, the role of JCPyV within the urinary tract remains an open question. In a prior study conducted by our group, the bladder microbiota of females with and without overactive bladder symptoms (OAB) were sequenced. Interestingly, JCPyV was only detected in females with OAB; none of the control (“asymptomatic”) microbiota contained JCPyV. …

The Impacts Of Framework Mutations On Steady-State Kinetics Of An Aldolase Abzyme, Charles Andrew Mettler

Master's Theses

During affinity maturation, antibodies acquire point mutations that lead to enhanced binding strength to a particular ligand while simultaneously becoming more conformationally restricted as they become increasingly complementary to their ligand’s electrostatic geometry. This property has catalytic potential in transition-state (TS) stabilization whereby kinetic barriers (i.e., the energetic gap between the substrate and its TS) are reduced and reaction rates are enhanced. This basic mechanism is thought to underlie the majority of the rate enhancement observed for enzymes. A key integration of antibody binding specificity and strength with enzymatic catalytic strategy is the development of catalytic antibodies (“abzymes”). Abzymes are …

Youth Culture, Organizational Values, And Participatory Politics In The Digital Spaces Of Youth-Led Anti-Gun Violence Movements, Julie M. Szamocki

Master's Theses

As traditional forms of participating in politics are waning in popularity and younger people are becoming more politically aware, new ways to engage in politics are emerging from the intersection of youth culture and digital spaces. One way of understanding this intersection of activism and youth culture is to analyze how youth-led activist organizations engage in participatory politics in the digital space. I analyze how anti-gun violence organizations March for Our Lives and GoodKids MadCity, led by youth activists, reflect a unique and distinct form of digital engagement and organizational culture. Through content analysis, I will be highlighting organizational comparison …

A Comparative Study Of The Impact Of Regimes In Latin America’S Education Systems: The Cases Of Mercosur, Alba-Tcp, And Pa, Victoria Desimoni

Master's Theses

This thesis presents a comparative study of the regional education policies and programs in three Latin American (LA) regional entities (hereafter ‘regimes’ and ‘regionalisms’): The Southern Common Market (MERCOSUR), the Bolivarian Alliance for the Peoples of Our America – People’s Trade Treaty (ALBA-TCP), and Pacific Alliance (PA). Each of these represents different regionalisms coexisting in LA (hegemonic, post-hegemonic, and counter-hegemonic regionalisms), which makes them ideal for comparative analysis. This project aims to compare these very diverse regimes to interrogate the similarities and dissimilarities, as well as discover who (the regional or the global) is shaping education systems in this area …

Connecting School Climate And Trust: A Content Analysis Of Elements Of Trust In Student And Staff School Climate Surveys, Katherine Thyen

Master's Theses

This study aims to make a concrete connection between trust in schools and school climate. Research indicates that both trust and school climate can positively impact school experiences and performance for teachers and students, but no formal connection has been made between these two elements of schools. In order to answer this study’s research questions of “What differences in frequency and context of trust dimensions exist between student surveys and teacher surveys?” and “How are survey items related to trust dispersed across school climate domains?”, a directed qualitative content analysis was performed. School climate surveys administered to students and teachers …

Cataloging And Engineering Temperate Coliphages Of The Human Urinary Microbiome, Elias Crum

Master's Theses

In the US, around 60% of females will be diagnosed with a Urinary Tract Infection (UTI) in their lifetime, and Escherichia coli is the most implicated etiological agent in UTIs. Despite its frequent association with lower urinary tract symptoms, recent studies have found that the urinary microbiome (UMB), the viral, bacterial, and fungal resident members of the urinary tract, of healthy females can also consist of E. coli. While most research has focused on the bacterial constituents of the UMB, bacteriophages, viruses that infect bacteria, are far more abundant. Bacteriophages (phages) of other human microbiomes have been shown to play …

Constructing Planetary Citizens Through Ecopedagogy In U.S. Social Studies Standards, Madeline Anne Rainey

Master's Theses

The world is in the age of the Anthropocene, where humans are impacting the environment to disastrous effects. The capitalist economy, promoting neoliberal policies of mass consumption, has exacerbated the world's environmental deterioration and social inequity. The rights and responsibilities people hold have been rapidly changing with the fourth industrial revolution. Globalization and Information and Communications Technology (ICT) have further expanded notions of citizenship. While there have been numerous attempts to bring the environment into schools, it has not emphasized what this crisis deserves. Ecopedagogy, as a critical theory, explicitly examines the interplay between environmental and social problems and challenges …

Institutionalism, Peer Culture, And Cultural Reproduction In Active Shooter Drills, Lillian Wynne Platten

Master's Theses

Columbine, Sandy Hook, Parkland: these are words that represent moments in history where schools should have become unprecedented sites of tragedy and isolated events. Except Columbine occurred in 1999, Sandy Hook in 2012, and Parkland in 2016, making them almost commonplace alongside hundreds of other mass shootings in the US. In place of gun regulation, schools are mandated to conduct active shooter drills, which mimic actual shootings through simulated events including the use of rubber bullets and masked actors to produce visceral reactions. Research has shown that these drills have produced trauma and desensitization among teachers, administrators, and counselors; but …

Interplay Between Human Microbiota And Celiac Disease, John James Colgan

Master's Theses

Celiac disease is an autoimmune disorder of the small intestine in which gluten, an energy-storage protein in wheat and other cereals, elicits an immune response leading to villous atrophy. Despite a strong genetic component, the disease arises sporadically over the lifetime leading us to hypothesize the microbiome might be a trigger. Here, we re-examined 16S data from 3 prior studies examining celiac disease and the microbiome with newer computational tools: the dada2 and PICRUSt 2 pipelines. Our results both confirmed findings of previous studies and generated new data regarding the celiac microbiome of India and Mexico. The datasets were also …

Interrogating Antagonistic Differences Among Pseudomonas Aeruginosa Cdia Alleles, Haotian Yang

Master's Theses

Bacteria are complex social organisms that live within mixed communities where microorganisms compete for limited resources. We studied Contact-Dependent Growth Inhibition (CDI), a particular type of competition mediated by a type 5b, or two-partner, secretion system that is widely spread among Gram-negative bacteria. CdiB and CdiA make up the two-partner secretion system that mediates CDI. CdiB translocates CdiA to the cell surface, and CdiA delivers its C-terminal toxin domain to the target cell. The C-terminal toxin (Tox) domain of CdiA is highly diverse. We studied Tox domains of various Pseudomonas aeruginosa clinical isolates. We found different strains that contain unique …