Digital Commons Network^™

Stream Response To A Dam Removal: Mill Creek, Davenport, Ca, Jessica J. Williamson

Master's Theses

Dams have many effects on stream morphology and ecology, including a loss of sediment supply downstream, reduced access to the entire stream for aquatic fauna, and a flooded area upstream of the dam. Dams are a hurdle for migrating organisms such as anadromous fish, which is a group of concern. An over 100-year-old dam on Mill Creek, a stream draining a coastal watershed in central California, was removed in the fall of 2021. The site is in the Santa Cruz Mountains, where endangered salmonids such as steelhead, Oncorhynchus mykiss, have historically lived. To study the change in the stream from …

Separation And Surface Examination Of Spacecraft Cabin Particulates, Grace A. Belancik

Master's Theses

Particulate matter in the atmosphere is a known detriment to human health, but several factors affect any particulate’s particular toxicity including particle size, surface area, and chemical composition. Extensive studies have been conducted to examine particulate hazards on Earth, but in crewed spacecraft, like the International Space Station (ISS), the particulate environment is wholly unique due to both the controlled environment and lack of gravity. Atmospheric sampling studies are underway, but another convenient source of airborne particulates for analysis is the contents of the vacuum bags used by the astronauts to clean the air vents. However, no method currently exists …

Endocrine Responses To Two Distinct Foraging Contexts In The Bonobo (Pan Paniscus), Lauren Mitchell

Master's Theses

In gregarious animals, a social structure characterized by female dominance is relatively rare. However, bonobos (Pan paniscus), one of the two species most closely related to humans, are characterized by partial female dominance, with females forming close social bonds. In contrast, chimpanzees (Pan troglodytes), a close relative of the bonobo, are characterized by strong male-male bonding and social dominance with female chimpanzees lacking close social bonds. There is a lack of consensus concerning the reasons for these behavioral differences in Pan, specifically, the physiological processes responsible for female dominance in bonobos. The role of hormones …

Design, Synthesis, And Nmr-Guided Characterization Of A Targeted Covalent Inhibitor-Like Molecule Against Ivyp1 From P. Aeruginosa, Samuel Taylor Moore

Master's Theses

Multi-drug resistance poses a serious threat to future generations and historical antibiotic pipelines; consequently, the medical and economic burdens associated with treating multidrug-resistant bacteria are substantiated. In this context, P. aeruginosa (PA) emerges as one of the most significant healthcare challenges, being a leading cause of resistance-associated mortality worldwide. Despite modern efforts to combat these poor outcomes, drug-resistant cases continue to rise, and the need for novel antibiotic treatment is apparent. To this end, we investigated relevant resistance mechanisms and past antibiotic targets within PA, and in doing so, we identified relationships between peptidoglycan biology and a periplasmic protein, Inhibitor …

Host Response To Implantation Of A Poly N-Isopropylarylamide Injectable Cell Therapy Vehicle, Cole Matthew Burk

Master's Theses

There is a need to develop novel and effective therapies targeting end-stage peripheral arterial occlusive disease (PAOD). Inducing collateral arteriogenesis is a possible novel treatment that produces a natural bypass for blood flow, a promising solution to the long-term issues seen with current treatments. Regenerative therapies, and progenitor cells specifically, have demonstrated great promise in repair after injury and disease. While most progenitor or stem cells have poor efficacy in this context, muscle progenitor cells, or myoblasts, have encouraging results. Myoblasts enhance arteriogenesis and secrete cytokines or chemokines that recruit monocytes to injury sites. Implanting these adherent cells in a …

Design And Testing Of A Prototype Prosthesis For Pediatric Upper-Limb Transradial Amputees To Provide Adjustable Size And Modular Characteristics, Paul Heli

Master's Theses

This study was conducted to develop a financially accessible body-powered upper-limb prosthetic socket that can be adjusted to maintain fit and function for a growing child with a transradial amputation. The main objectives of the study were to design, manufacture, and test a device that was comfortable, functional, affordable, and adjustable. The socket was designed to be comfortable using global variables controlling the computer-aided design (CAD) model size with user-specific measurements. Comfort was also incorporated using shape-forming of the socket for specific residual limb features. The device was designed to perform the two main functions of suspension, or attachment to …

Development Of A Pressure Sensing System Coupled With Deployable Machine Learning Models For Assessing Residual Limb Fit In Lower Limb Prosthetics, Maxwell D. Lewter

Master's Theses

Lower limb amputations pose significant challenges for patients, with over 150,000 cases annually in the U.S., leading to a high demand for effective prosthetics. However, only 43% of lower limb prosthetic users report satisfaction, primarily due to issues with socket fit, which is critical for comfort, stability, and preventing injury. This study presents a deployable sensing system for potentially real-time monitoring of prosthetic socket fit by using pressure sensors and convolutional neural networks (CNNs) to analyze the pressure distribution within the socket. A novel CNN architecture, utilizing both dilated and strided convolutions, is proposed to effectively capture spatial-temporal patterns in …

Thermal Modeling Of Cooling Time Of Submarine Dacite Lapilli Tuff: Brothers Volcano, Kermadec Arc, Kyler Byrd

Master's Theses

Little is known about submarine volcanoes' eruptive histories and styles, even though they are essential to developing island arc systems and represent the second largest volcanic systems on Earth. Scientific drilling allows for the opportunity to study these systems. This study focused on two drill sites on Brothers volcano from IODP Expedition 376: Site U1528, located on the resurgent cone, and Site U1530, located on the caldera rim. Expedition researchers analyzed samples for clast radius, density, thermal conductivity, and specific heat. This data was then entered into the heat transfer equation of a sphere to create a cooling curve model …

Increasing Pride Skills For Child Engagement Using Ipcit With Children With Autism Spectrum Disorder, Jordan Etherington

Master's Theses

Many children with autism spectrum disorder display elevated levels of problem behaviors, such as aggression and defiance, in addition to symptoms characteristic of autism, such as deficits in social communication and interaction. Parent Child Interaction Therapy (PCIT) is a behavioral parent training program designed to improve problem behavior in young children by teaching parents to use skills that reinforce appropriate behaviors. In addition, the interactive nature of PCIT may help children with autism increase the rates at which they engage and interact with their caregivers. There are many barriers to treatment completion in PCIT, including high attrition rates due to …

Quantifying The Mechanisms Behind Carbon Sequestration And Soil Health Following Compost Application In A Rangeland Chronosequence, Grace Damaschino

Master's Theses

Compost application to rangelands has the potential to sequester carbon (C) and add essential plant nutrients to the soil. The California Department of Food and Agriculture's (CDFA) Healthy Soils Project (HSP) provides financial support to farmers and landowners to implement innovative practices that promote soil health. The CDFA is currently recommending compost application rates of 6-10 tons per acre; however, previous research suggests that degraded soils may require a larger dose of compost to overcome limitations, therefore this recommendation might not meet soil health or soil carbon sequestration objectives. This study examines the compost rate effects on soil health, while …

Induced Systemic Resistance Against Nematodes By Plant Growth-Promoting Microbes In Potatoes, Cole Grannan

Master's Theses

Biofertilizers consist of plant growth-promoting microorganisms that establish symbiotic relationships with plant roots and stems. These beneficial microbes play a crucial role in enhancing plant defenses against various threats including insects, nematodes, and microbial pathogens. The purpose of this study was to investigate the effectiveness of two fungal biofertilizers (an endophytic strain of Beauveria bassiana (BA) and a mixture of arbuscular mycorrhizal (AM) fungi), specifically their ability to induce systemic resistance against plant- parasitic nematodes (PPNs) in potatoes (Solanum tuberosum cv. Masquerade) under controlled greenhouse conditions. The study utilized soil collected from Colorado State University’s San Luis Valley (SLV) Research …

Rape Beyond Fantasy: Exploring The Influence Of Booktok's Erotica And Dark Romance Literature On Young Adult Perceptions Of Consent And Boundaries, Teagan Bailey Fortune

Master's Theses

Advances in technology and media, particularly TikTok, have had a significant impact on the younger generation. BookTok, a community that emerged from TikTok, is a platform where users can promote, share, and discuss book recommendations, using “spice level” or chili emojis to indicate the rating of explicit content. While recommendations often focus on erotica and dark romance fiction, concerns arise when such content glamorizes and normalizes rape culture, especially for young adults (YA). The normalization of toxic relationships can potentially influence YA perceptions of consent and boundaries. This study explores how YA perceive rape culture and consent in erotica and …

Ephemeral Legacy, Allison Hall

Master's Theses

Recently, my thoughts have centered on the problem of legacy. How do we forge bonds with other humans? What happens on an interpersonal level when these humans pass away, or when we pass, and they continue in life? How do queer spaces consistently offer deeper phenomena of interpersonal legacies; how does death operate as generational catalyst? I am particularly interested in putting these questions in the context of queer spaces. In queer culture, kinship is formed in ways that break from typical western notions of kinship. Despite being incoherent to western notions of family, queer bonds are extremely strong (Bradway …

Investigating Nekton Response To Changing Salinities In The Mississippi Sound: An Experimental And Statistical Approach, Adam Murray

Master's Theses

The Mississippi Sound provides nursery habitats for many coastal species and is recognized for its commercial fisheries. Previous freshening events linked to the Bonnet Carré Spillway, a Mississippi River flood diversion structure, proved catastrophic for oyster populations in the Mississippi Sound, but effects on mobile fish and shellfish species are not well-defined. The planned Mid-Breton Sediment Diversion (MBSD), an initiative to combat wetland loss, is also forecasted to lower salinities in the region, increasing the need to better understand responses of commercially and ecologically important species to freshening events. The objective of this study was to characterize effects of salinity …

Geomorphic Assessment And Flow Modeling Of Pearl Darter (Percina Aurora) Habitat In The Pascagoula River Watershed, Malia Davidson

Master's Theses

Freshwater ecosystems are complex ecosystems driven by hydrologic, geomorphic, and biological processes. Considering both abiotic and biotic factors is important to understanding resident species habitat. Geomorphology is a known, but often neglected factor in habitat assessment for freshwater fishes. A crucial feature commonly seen in alluvial stream systems are sandbars, which are dynamic and variable sediment structures that are known to have many associated species. One such species is the Pearl Darter, Percina aurora, a federally threatened species that only resides in the Pascagoula River watershed. Despite its status, habitat preference remains unclear. To fill this knowledge gap, I …

Lack Of Inflammatory Response In Mouse Embryonic Cells To Listeria Infection, Damilola Oyebode

Master's Theses

Approximately 1 in 5 pregnancies in the United States results in miscarriage, with a significant percentage of these losses attributed to failed implantation due to immunological challenges encountered by the early embryo. Recent research has shown that key cell types within mouse blastocysts, including embryonic stem cells (ESCs) and trophoblast stem cells (TSCs), exhibit remarkable resilience against the cytotoxic effects associated with viral infections and embryotoxic cytokines, such as TNFα and IFNγ, both of which are known to hinder blastocyst development. However, the immune properties of the preimplantation stage embryo, specifically the blastocyst, remain poorly understood. Using mouse cell model, …

Juvenile And Subadult Gulf Sturgeon (Acipenser Desotoi) Use Of The Pascagoula River Estuary, Sarah Stovall

Master's Theses

Gulf Sturgeon (GS) are an anadromous species currently listed as “Threatened” under the Endangered Species Act. They reside in habitats across the northern Gulf of Mexico including coastal rivers, estuaries, and marine waters, making annual migrations between freshwater and marine habitats for spawning/summer resting and feeding, respectively. Since past studies prioritize adult movement, understanding how and when juvenile and subadult GS use the Pascagoula River estuary (PRE), a complex, bifurcated river delta federally designated as critical habitat is necessary to improve conservation efforts. My thesis assessed juvenile and subadult GS use of the PRE across four years (2020-2024) by analyzing …

Exploring The Therapeutic Benefits Of Dance In The Academic Schedule: The Effects On Stress Among High School Students, Amanda Polanowski

Master's Theses

The purpose of this study was to gain insight into the minds of dance students about the stress they experienced as a result of their academic schedules and extracurriculars. The following research questions informed this study:

Q1 Does incorporating dance into the academic schedule lower stress in high school students?

Q2 In what mental state are students before and after taking dance class?

Q3 Does dance provide mental health benefits for high school students?

Student stress was evaluated before the study using a questionnaire as well as before and after each dance class through surveys. Eighteen students participated in a …

Policies And Price Controls On The Research And Development Of Orphan Drugs In The United States And The European Union, Bena Pearl Filipczak Smith

Master's Theses

There is substantive literature surrounding the impact of price controls on the research and development (R&D) of new pharmaceutical products. The European Union (EU) and United States (US) are often studied in contrast to examine the influence of price controls as the US has fewer pharmaceutical price controls than the EU.

We find moderate evidence that the US spent more on annual domestic pharmaceutical R&D than the EU between 2004 and 2021, on average, before and after adjusting for GDP growth per capita and year. We find strong evidence that the US increased annual domestic R&D spending at a faster …

Techno-Economic Analysis Of Waste Plastic Gasification, Henrik Don-Yor Ketting

Master's Theses

The increasing generation of plastic waste and its environmental impact has driven interest in alternative disposal methods such as gasification. This study presents a techno-economic analysis of the gasification of waste plastics, specifically polypropylene (PP) and polyethylene (PE), to produce syngas. A two-stage process—thermal decomposition followed by steam reforming—was simulated using Aspen Plus. The simulation results were validated against experimental data available in the literature. The economic analysis was conducted by estimating the capital and operating costs of the gasification plant, considering factors such as feedstock costs, energy requirements, and syngas purification systems. Net Present Value Calculations were used to …

Are College Students' Grocery Shopping Habits Consistent With The Mediterranean Diet Guidelines? A Preliminary Report, Montana Grace Ayala

Master's Theses

The number of people diagnosed with cardiovascular disease, hypertension, obesity, and diabetes mellitus continues to grow. The Mediterranean diet has been shown to reduce the risks of developing heart disease. Fruit and vegetable consumption is low across the country. Improving fruit and vegetable consumption for adults might start with improving intake earlier in life because it can influence better food habits. Following the Mediterranean diet at a young age can prevent chronic diseases from developing. It is well known that college students have diets that are not consistent with healthy eating habits and can be influenced by the need for …

Machine Learning-Driven Process Analysis And Optimization In Solid-State Welding And Fusion-Based Additive Manufacturing, Radif Uddin Ahmed

Master's Theses

In the modern era of advanced manufacturing, optimizing process parameters is pivotal in ensuring the quality and reliability of sophisticated component fabrication. This study presents a novel, data-driven approach to parameter optimization in two cutting-edge manufacturing techniques: Friction Stir Welding (FSW) and Laser Powder Bed Fusion (LPBF). By leveraging machine learning methodologies, this research addresses the critical challenge of efficiently determining optimal process parameters, a task traditionally relying on time-consuming and resource-intensive trial-and-error methods. This study will lead to a robust data-driven framework for process analysis of more advanced manufacturing techniques like the Additive Friction Stir Deposition (AFSD) process. Friction …

Creatine And Depression In Rodents: A Meta-Analysis, Ruchika S. Tirupachur

Master's Theses

Traditional treatments for major depression are based on the monoamine deficiency hypothesis, and they fail to achieve remission in a substantial portion of patients. Newer evidence suggests the pathophysiology of depression is a more complex story, highlighting a need for research in alternative therapies. Mounting evidence shows a linkage between depression and the supplement creatine monohydrate (CRMH). Research in rodent models suggests that CRMH may both alleviate depressive symptoms and enhance the efficacy of standard antidepressants like SSRIs. The following study describes findings from a combined fixed- and random-effects meta-analysis based on four empirical studies investigating the effect of CRMH …

The Impacts Of Recreational Infrastructure On Mammal Use Of Riparian Zones In Northern California Regional Parks, Emily A. Matthews

Master's Theses

Public lands have been important for the protection of riparian habitats; however, many public lands are also used for recreation, which can reduce mammal habitat use. Understanding how mammals are affected by recreation in riparian areas can help guide management decisions. The goal of this research is to understand the effect of recreation on mammal use of riparian habitats in two popular East Bay Regional Parks, Charles Lee Tilden and Wildcat Canyon, and to map the extent of that impact. Cameras were deployed in the riparian areas of a high, moderate, and low development site (Alvarado, Tilden, and Wildcat Canyon) …

Using Moss As An Inexpensive Air Pollution Bioindicator For Environmental Equity In Santa Clara Country, California, Tam Dan Tran

Master's Theses

Toxins pervade urban areas and pose long-term health risks to humans. I examine moss as an affordable bioindicator and assess whether moss monitor results reflect other air quality (AQ) indicators, environmental factors, and social vulnerability. Specifically, I investigate (1) whether moss is an effective atmospheric pollution indicator and (2) whether low-income or high-lead-risk neighborhoods experience greater exposure to air pollution. I set out Hypnum cupressiforme moss for two months of exposure in 28 Santa Clara County locations and then measured chromium, zinc, nickel, and the loss of chlorophyll fluorescence in the moss tissue. I gathered real-time particulate matter (PM2.5) measurements …

An Assessment Of Anthropogenic Injuries On White Sharks (Carcharodon Carcharias) In Central California, Kaitlyn Yee

Master's Theses

As human activities increasingly impact marine ecosystems, understanding the effects of anthropogenic activity on white sharks is important for their continued conservation. Human-induced injuries are observed in many shark species. Such injuries have been found to have physiological and ecological impacts. Four sites in Central California off the coasts of Aptos, Año Nuevo Island, Southeast Farallon Island, and Point Reyes are all known areas of white shark aggregation with varying levels of human use and protection. Utilizing a vast video database, this study evaluated the effects of natural and non-natural anthropogenic shark injury types across all locations, age classes, and …

A Trailside Study Of A Coast Redwood Forest Understory Specis, Trillium Ovatum, In The Santa Cruz Mountains, Mary Yan

Master's Theses

To fully understand one of the world’s greatest terrestrial carbon sinks, the coast redwood forest, a co-occurring species may be the key to unique and accessible opportunities to collectively monitor the health of this important habitat. I investigated the relationship between hiking trails and Trillium ovatum within the redwood forests of three California State Parks. Utilizing quadrats across 115 one-meter plots and 58 10-meter transects, T. ovatum occurrence and abundance were recorded and analyzed with factors including proximity to trails, distance from streams, elevation, slope, canopy cover, duff depth, co-occurring understory species, and tree species dominance. Results indicated a higher …

Swim Bladder Morphology Influences The Responses Of Nearshore Rockfishes To Barotrauma, Molly K. Alvino

Master's Theses

Rockfishes (Sebastes spp.) are ecologically and economically important fishes in the continental shelf and slope regions of the Eastern Pacific Ocean. All species within the Sebastes genus have a buoyancy organ, the swim bladder, which is sensitive to rapid changes in pressure that occur when fish are caught and brought up to the surface. Although all rockfishes have swim bladders, pressure-related injuries (barotrauma) affect rockfish species differently. I determined whether swim bladder morphology can explain differences in barotrauma among semi-pelagic (Blue and Olive rockfish) and benthic (Gopher and Vermilion rockfish) species that occupy different habitat zones. Seven different swim bladder …

Mammal Response To Wildfire In Redwood Forests In Northern California, Kristine Doerr

Master's Theses

California has historically experienced recurrent wildfires that have shaped many of the region’s unique ecosystems such as coast redwood (Sequoia sempervirens) forests. Redwood forests, particularly old-growth redwoods, are vital habitats for many wildlife species. Still, these long-living, fire-resistant trees are facing altered fire regimes due to fire suppression and climate change. The 2020 CZU Lightning Complex Fire was a consequence of these changes and significantly altered the landscape of the Santa Cruz Mountain region. This study analyzes mammal recovery after wildfire in high and low fire severity locations of the CZU Fire using two camera trap grids. The high-severity grid …

The Effects Of Full-Body Photo-Editing On Female Body Image, Claire E. Mcelhern

Master's Theses

Over the past decade, the use of photo-based social media sites has seen an exponential increase. Although these sites can be beneficial for connecting with others, the editing and modification of images posted to social media has also produced adverse effects on some who use them. The aim of the present study was to assess whether partaking in a full-body photo-editing task would have a significant effect on weight dissatisfaction, appearance dissatisfaction and body confidence, compared to a control condition. Female college participants were first asked about their general Instagram use, and then were given a baseline Visual Analog Scale …