Digital Commons Network^™

Using Moss As An Inexpensive Air Pollution Bioindicator For Environmental Equity In Santa Clara Country, California, Tam Dan Tran

Master's Theses

Toxins pervade urban areas and pose long-term health risks to humans. I examine moss as an affordable bioindicator and assess whether moss monitor results reflect other air quality (AQ) indicators, environmental factors, and social vulnerability. Specifically, I investigate (1) whether moss is an effective atmospheric pollution indicator and (2) whether low-income or high-lead-risk neighborhoods experience greater exposure to air pollution. I set out Hypnum cupressiforme moss for two months of exposure in 28 Santa Clara County locations and then measured chromium, zinc, nickel, and the loss of chlorophyll fluorescence in the moss tissue. I gathered real-time particulate matter (PM2.5) measurements …

Mammal Response To Wildfire In Redwood Forests In Northern California, Kristine Doerr

Master's Theses

California has historically experienced recurrent wildfires that have shaped many of the region’s unique ecosystems such as coast redwood (Sequoia sempervirens) forests. Redwood forests, particularly old-growth redwoods, are vital habitats for many wildlife species. Still, these long-living, fire-resistant trees are facing altered fire regimes due to fire suppression and climate change. The 2020 CZU Lightning Complex Fire was a consequence of these changes and significantly altered the landscape of the Santa Cruz Mountain region. This study analyzes mammal recovery after wildfire in high and low fire severity locations of the CZU Fire using two camera trap grids. The high-severity grid …

Exploring Community Adaptation To Public Safety Power Shutoff Events: Findings From Two Case Studies Of Unincorporated Mountain Communities In Southern California, Ramiro M. Brown

Master's Theses

As aging electrical infrastructure in the US continues to succumb to unyielding weather patterns brought on by climate change, there is an urgency among Investor-Owned Utilities (IOUs) to reduce the likelihood of their equipment sparking a wildfire. Public Safety Power Shutoffs (PSPS) – the intentional de-energization of the electrical grid on high fire weather danger days – have become a staple in IOU Wildfire Mitigation Plans (WMPs) since 2018 as one way to avoid wildfire ignitions via electrical infrastructure. One criticism of PSPS events is that they create their own hazard by cutting off power to thousands – sometimes millions-of …

Relationship Between Depression, Rumination, And Emotionally Valenced Working Memory Performance, Dewey Tran

Master's Theses

Working memory is limited in capacity and easily disrupted such that mood states and competing cognitive processes can impair performance. Rumination is highly associated with depression that may contribute to impaired working memory but has not often been studied. The goal of this study was to elucidate the relationship between depression severity, ruminative state, and working memory performance. Participants completed a baseline assessment of depression severity, rumination (trait and state), and working memory then randomly assigned to a rumination or control groups, followed by a second assessment. I hypothesized working memory would be explained by an interaction between depression severity …

Enhancing Cross-Cultural Communication In Low-Resource Language Conversational Agents, Hardi V. Trivedi

Master's Theses

Recent advancements in natural language processing (NLP) and large language models (LLMs) have facilitated the development of systems capable of generating human-like responses across a wide range of tasks. However, the majority of research has focused predominantly on English, overlooking the vast linguistic diversity globally. For true global inclusivity, extending research to other languages is crucial, particularly as it can significantly benefit various sectors such as business, healthcare, government, and education. A major challenge in this expansion is the scarcity of digital data available and the limited number of pre-trained models for low-resource languages. Our research specifically addresses these challenges …

The Effects Of Stress On Attentional Networks, Alice Tsvinev

Master's Theses

The human brain has developed mechanisms to aid our survival, including attentional networks and stress response. Attentional shifts allow humans to react accordingly to their environment, following innate processes like fight or flight. Prolonged exposure to acute stress interferes with such cognitive processes as attention and working memory, impacting attentional systems. The present study examined the effects of acute stress on visual attention processes, specifically focusing on the orienting, alerting, and executive attention networks. 49 participants were randomly placed in either a stress or non-stress condition, then asked to reflect on either stressful or positive moments in their lives, respectively. …

Win-Win Ecology: Can Mosses Promote Dudleya Germination To Restore California Quarries?, Kate L. Worrell

Master's Theses

Human actions directly damage habitat for native plants; restoration ecology facilitates successful plant re-establishment in these environments. Open-pit mines leave behind steep, rocky, and nutrient-deficient habitats that are some of the most degraded ecosystems on the planet. Dudleya or ‘live-forevers’— a genus of native California succulent plants that contains many rare, threatened, or endangered species — grow on rocky cliffs and may create a successful reclamation-restoration story. However, Dudleya germination is poorly understood. Much of the literature on Dudleya cites a single field report suggesting that bryophytes facilitate germination, but no previous experiments have evaluated this proposal. In this study, …

Information About A Racial Demographic Shift May Influence Tolerance For Outgroup Contact, Yvonne N. Phan

Master's Theses

When exposed to information about a demographic shift towards a non-White majority in America, White individuals tend to prefer interactions and settings within their own ethnic group over minority ethnic groups. This behavior may suggest that future inter-racial dynamics in the U.S. could be characterized by resistance from White individuals. To understand how other racial groups respond to information about a racial demographic shift, I collected data on three measures of outgroup tolerance from a multiracial sample of students from San Jose State University’s participant database after exposing them to information about a racial demographic shift driven by a Hispanic …

The Moderating Role Of Meaningful Work On The Relationship Between Loss Of Self-Identity And Psychological Well-Being In Retired Collegiate Athletes, Sarah M. Kurd

Master's Theses

Collegiate athletes are a focal point for many universities. These student-athletes work most of their lives to make it to the university level. Many collegiate athletes aspire to make it to the professional level after they graduate from college, but only a rare handful make it to the top. The rest of the athlete population retires and is placed into a world of “normalcy,” but the transition out of athletics can be very challenging, impacting a person’s psychological well-being. Most of these athletes will have to work a professional job after leaving sports. The present study aimed to examine the …

The Impacts Of Recreational Infrastructure On Mammal Use Of Riparian Zones In Northern California Regional Parks, Emily A. Matthews

Master's Theses

Public lands have been important for the protection of riparian habitats; however, many public lands are also used for recreation, which can reduce mammal habitat use. Understanding how mammals are affected by recreation in riparian areas can help guide management decisions. The goal of this research is to understand the effect of recreation on mammal use of riparian habitats in two popular East Bay Regional Parks, Charles Lee Tilden and Wildcat Canyon, and to map the extent of that impact. Cameras were deployed in the riparian areas of a high, moderate, and low development site (Alvarado, Tilden, and Wildcat Canyon) …

A Trailside Study Of A Coast Redwood Forest Understory Specis, Trillium Ovatum, In The Santa Cruz Mountains, Mary Yan

Master's Theses

To fully understand one of the world’s greatest terrestrial carbon sinks, the coast redwood forest, a co-occurring species may be the key to unique and accessible opportunities to collectively monitor the health of this important habitat. I investigated the relationship between hiking trails and Trillium ovatum within the redwood forests of three California State Parks. Utilizing quadrats across 115 one-meter plots and 58 10-meter transects, T. ovatum occurrence and abundance were recorded and analyzed with factors including proximity to trails, distance from streams, elevation, slope, canopy cover, duff depth, co-occurring understory species, and tree species dominance. Results indicated a higher …

An Assessment Of Anthropogenic Injuries On White Sharks (Carcharodon Carcharias) In Central California, Kaitlyn Yee

Master's Theses

As human activities increasingly impact marine ecosystems, understanding the effects of anthropogenic activity on white sharks is important for their continued conservation. Human-induced injuries are observed in many shark species. Such injuries have been found to have physiological and ecological impacts. Four sites in Central California off the coasts of Aptos, Año Nuevo Island, Southeast Farallon Island, and Point Reyes are all known areas of white shark aggregation with varying levels of human use and protection. Utilizing a vast video database, this study evaluated the effects of natural and non-natural anthropogenic shark injury types across all locations, age classes, and …

Creatine And Depression In Rodents: A Meta-Analysis, Ruchika S. Tirupachur

Master's Theses

Traditional treatments for major depression are based on the monoamine deficiency hypothesis, and they fail to achieve remission in a substantial portion of patients. Newer evidence suggests the pathophysiology of depression is a more complex story, highlighting a need for research in alternative therapies. Mounting evidence shows a linkage between depression and the supplement creatine monohydrate (CRMH). Research in rodent models suggests that CRMH may both alleviate depressive symptoms and enhance the efficacy of standard antidepressants like SSRIs. The following study describes findings from a combined fixed- and random-effects meta-analysis based on four empirical studies investigating the effect of CRMH …

Hypoxic Incubator: Improving Robustness/Reliability And Demonstrating Physiological Efficacy, Damon Dennis Tan

Master's Theses

The Microphysiological Systems Laboratory aims to develop colorectal cancer tumor models under a hypoxic environment to assess model response to pharmaceutical compounds in vitro. To perform relevant studies, researchers have attempted to use different hypoxic inducing strategies such as a nitrogen pod and hypoxic incubator to recreate in vivo physiological responses to hypoxia. However, studies would be interrupted due to incubator functionality failure. To ensure successful and physiologically relevant studies, I improved and verified the robustness and reliability of a hypoxic incubator previously designed and manufactured in the lab. Through the testing and iterating design processes, I engineered and implemented …

3d Printed Microfluidic Fabrication Methodology, Characterization, Mechanical Design, And Applications In Electrostatic Artificial Muscles And Benthic Microbial Fuel Cells, Terak B. Hornik

Master's Theses

The fabrication of microfluidic devices often requires specialized methods. The development of these methods requires careful characterization and understanding of the processes involved. Using primarily PolyJet 3D printing technology, microfluidics offers a wide scope of applications such as microfluidic benthic microbial fuel cells (MBMFCs) and electrostatic artificial muscles. MBMFCs benefit from the confinement of the microbes resulting in close proximity between the electrode and the organisms. Using a modular design called the Sponge, assembly and upscaling is possible. Electrostatic artificial muscles benefit from a microfluidic approach due to the non-linearity of electrostatic attraction creating disproportionate benefits when miniaturized. When designed …

Hardware Control Unit For Trusted Program Verification System, Jake Owen Alt

Master's Theses

Trust in the underlying hardware is the foundational step towards trusting the correctness and integrity of a software application. However, verifying that today's extremely complex processors work exactly as intended has not been feasible, as evidenced by several recent hardware bugs. Trustworthy, formally verified processors currently forego intricate performance enhancements such as out-of-order execution, hampering them substantially versus their less secure counterparts.

The Containment Architecture with Verified Output (CAVO) system solves this problem by isolating the host system and requiring the result of each instruction to be validated by a small, trusted hardware module called the Sentry. Any transmissions to …

“Get Out Of The House Before It Kills You”: Haunted Housewives And The Feminist Gothic In Ira Levin’S Rosemary’S Baby And The Stepford Wives, Sarah Jeffries

Master's Theses

Ira Levin’s works Rosemary’s Baby and The Stepford Wives have been cultural touchstones since their releases in 1967 and 1972, respectively, with their legacy as iconic American horror stories cemented by successful film adaptations. At the surface level, these stories can be read as tales about unfortunate housewives that face unusual horrors. Rosemary Woodhouse finds herself trapped in a gothic New York City apartment building, the Bramford, where her husband and neighbors collude to force her to carry and birth Satan’s son, like a perverse Virgin Mary. Joanna Ebert is similarly stuck in suburban Stepford, Connecticut where she discovers the …

Sadomasochistic Sensations: A Phenomenological Analysis Of Black Ontology, Embodiment, And Transcendence, Sam Forrey

Master's Theses

Over the past fifteen years, feminists have challenged the notion that sexual sadomasochism perpetuates racial and gender-based violence, and instead claim that the practice can be a powerful site to control and subvert oppression. In this thesis, I contribute to this growing discourse and argue that sensations experienced during practices of Black sexual sadomasochism and attention to the feelings and affects that arise from them can be used to mediate Black being in a violently antiblack United States. Through applications of Black feminist thought, Black anti-humanism, and phenomenology, I claim that antiblack oppression denies Black people the experience of tactile …

The Skin Microbiome And Cutaneous T-Cell Lymphoma, Gail Hillary Lantaca Enriquez

Master's Theses

Skin microbiota is associated with disease activity in cutaneous T-cell lymphoma (CTCL). A common treatment for CTCL, narrowband ultraviolet B (nbUVB) phototherapy, has shown to shape the skin microbiome in association with disease improvement in other skin disorders such as atopic dermatitis. To assess the effect of nbUVB phototherapy on the skin microbiome, we performed a longitudinal analysis of skin samples of CTCL patients receiving nbUVB. We found that the treatment led to increased bacterial diversity and reduced abundances of Staphylococcus aureus and Staphylococcus lugdunensis, both bacteria known to be pathogenic. These findings imply that nbUVB treatment changes the skin …

Associations Between Neighborhood Factors And Adherence In Youth With Spina Bifida: The Mediating Role Of Parental Stress And Youth Internalizing Symptoms, Breana Lyn Bryant

Master's Theses

Spina bifida (SB) is a birth defect that impacts physical, medical, and neuropsychological functioning. Physical complications like hydrocephalus and bladder dysfunction require daily adherence to complex medical regimens. Additionally, youth with SB are more likely to have symptoms of anxiety and depression which can impact their ability to master their regimens. Evidence in other pediatric populations have examined the impact of family factors, like parental stress, and individual-level predictors of self-management outcomes, yet few have examined how the broader context, like neighborhoods, impact outcomes. Therefore, the current study examined (1) the level of the neighborhood vulnerability and acute healthcare services …

Lactobacillus-Mediated Phage Induction And Inhibition Of Growth Of Escherichia Coli, Natalie Stegman

Master's Theses

Bacterial species inhabit both the “healthy” and symptomatic female urinary tract. Lactobacillus species are frequently dominant members of the healthy urinary tract microbiota (urobiome), and thus have been associated with the lack of lower urinary tract symptoms (LUTS). In contrast, colonization by Escherichia coli is the most common cause of urinary tract infections (UTIs). Prior research has found that strains of Lactobacillus can inhibit the growth of uropathogens such as E. coli as well as vaginosis-associated pathogens. Investigations into the means by which lactobacilli inhibit pathogenic growth have primarily focused on their production of hydrogen peroxide (H2O2) and lactic acid, …

Rebuilding Risk Assessment Tools And Evaluating Their Effect On Recidivism In Illinois, Cristina Penate

Master's Theses

This study seeks to examine the relationship between alternative measures of criminal history and recidivism in a cohort of convicted individuals released from prison in Illinois between 2010 and 2015. The current study expands on prior research by examining the relationship between prior criminal history and recidivism using alternative measures of both to account for potential bias resulting from differential policing activities that may lead to convictions. Traditionally, risk assessment instruments have relied on an individual’s total prior convictions for any offense and any re-arrest after release from prison. The current research developed a more nuanced measure of prior convictions …

Transcriptome-Wide Association Study Of The Plasma Proteme Reveals Cis And Trans Regulatory Mechanisms Underlying Complex Traits, Henry Wittich

Master's Theses

Most genetic variants associated with complex human traits exist in non-coding regions, and thus the mechanism by which they affect a trait can be unclear. Genetic regulation of transcription and translation are key mechanisms through which genetic variants impact traits. Quantitative trait locus (QTL) mapping studies leverage data produced by advanced sequencing and assay technology to identify variants associated with the abundance of a molecular trait like RNA expression (eQTL) or protein levels (pQTL). While proximal genetic variants (cis-acting), like those in promoter or enhancer regions of genes, tend to have the largest effect sizes on RNA transcript and protein …

Understanding Teachers’ Responses To Parental Demands In The Midst Of Competing Responsibilities, Kathryn Battafarano

Master's Theses

This study builds upon a plethora of educational research and focuses specifically on middle school grade level teachers. I predominantly utilized qualitative interviews to understand how teachers respond to parental demands; these answers were supplemented by some quantitative data about their schools. The study configures information about teachers’ school environments and requirements, teachers’ interactions with parents, and how teachers deal with parental demands in relation to other demands and requirements. Effort was made to investigate how teacher experience, teaching style, and subject matter as well as school type (e.g., socio-economic makeup of the school) and school location influence parental demands …

Queer Futurity Needs Queer Grief: An Analysis Of The U.S. Public Response To Queer Loss, Jordan Nicole Mckinnon

Master's Theses

Grief is an inevitable part of the human experience. However, communities, especially those where a majority of members have disprivileged identities, experience disenfranchised grief, or grief that is not openly acknowledged, socially accepted, or publicly mourned. Members of the LGBTQIA+ (lesbian, gay, bisexual, transgender, queer, intersex, asexual, plus other identities not encompassed in the acronym) community, and their allies can experience a type of disenfranchised grief known as queer grief. I argue that everyone, not just allies and members of the LGBTQIA+ community, should recognize and publicly acknowledge queer grief, because if queer lives lost are not recognized as worthy …

Investigation Of Temperature, Solution Strength, And Applied Stress Effects On Cation Exchange Processes In Different Geosynthetic Clay Liner Products, Kendra Fuller

Master's Theses

An extensive laboratory test program was conducted to analyze and compare the cation exchange processes in three different varieties of sodium bentonite (Na-B) geosynthetic clay liners (GCLs) over increased conditioning durations up to 32 days and investigate the effects of temperature, solution strength, and applied stress. The goal of this test program was to establish whether the variables of temperature, solution strength, and applied stress improved or degraded the engineering properties of GCLs in laboratory testing and municipal solid waste (MSW) landfill applications. The GCLs were conditioned in liquids of increasing ionic strength, using deionized water and 2, 50, and …

History & Evolution Of Plastic Mulching Technology: An Ethnography Of California Strawberry Plasticulture, Kalea Conrad

Master's Theses

This ethnography draws on key informant interviews and participant observation to produce a case study about plastic mulching as an important industry standard in specialty crop production. It documents the historic adoption and present role of plastic mulching technology in California strawberry production and addresses the characteristics of commercial standard management that inhibit the adoption of alternative mulching practices. It complements extensive research on strawberry pathology and fumigation, breeding innovations, fertilizer and pesticide treatments, and maximization of yields to incorporate participants’ lived experiences and knowledge of mulch origins, the technology adoption process, mulch benefits and drawbacks, the state of agricultural …

Design And Implementation Of An Inverted Short Baseline Acoustic Positioning System, Jakob Frabosilio

Master's Theses

This document details the design, implementation, testing, and analysis of an inverted short baseline acoustic positioning system. The system presented here is an above-water, air-based prototype for an underwater acoustic positioning system; it is designed to determine the position of remotely-operated underwater vehicles (ROVs) and autonomous underwater vehicles (AUVs) in the global frame using a method that does not drift over time.

A ground-truth positioning system is constructed using a stacked hexapod platform actuator, which mimics the motion of an AUV and provides the true position of an ultrasonic microphone array. An ultrasonic transmitter sends a pulse of sound towards …

Validation Of Mobile Devices In Arbitrary Locations Against Force Plate Standard For Balance Assessment, German J. Ellsworth

Master's Theses

With balance assessment being essential to the prediction of fall risk and detection and assessment of motor disorders, increasing clinical accessibility to objective balance metrics is essential. Work has been done validating center of mass (COM) acceleration metrics against well regarded force plate center of pressure (COP) position standards for mobile device data acquisition systems, but most research is restricted to devices being close to the COM or strapped in a harness configuration. Through the use of rigid body kinematics and the inverted pendulum model, this study develops novel methodology for calculating COM acceleration using mobile devices in arbitrary positions, …

Barriers To And Solutions For Fuel Treatments In The Central California Coast Ranges, Sierra Dawn Lyman

Master's Theses

In recent years, the Western United States has experienced an increase in fire activity due to multiple factors, including anthropogenic climate change, historical forest management focused on suppression, and the expanding wildland urban interface (WUI). In response, California is working to accelerate the pace and scale of forest management and fire hazard reduction efforts. Although fuel treatment projects are being implemented, they often encounter various barriers. While existing literature highlights these barriers, it tends to overlook the solutions being applied in practice to overcome them. Using an ethnographic approach that includes key informant interviews and participant observation in four sites …