Digital Commons Network^™

Dispersal Distance Determines The Exponent Of The Spatial Taylor's Power Law, Pei Jian Shi, Hardev S. Sandhu, Gadi V.P. Reddy

Faculty Publications

The equation describing a power-law relationship between the mean and variance of population abundance in space or time is known as Taylor's power law (TPL), initially observed in samples of insects. Factors determining the TPL exponent are of particular concern to ecologists because the observations of the exponent usually range 1-2. Recent studies have suggested that TPL is caused solely by statistical artifacts rather than biological processes, with the corresponding statistical models lacking linkages to explicit population demography. In this study, we used two special forms of the Neyman-Scott cluster point process to study the effect of offspring dispersal distance …

Membrane-Dependent Activities Of Human 15-Lox-2 And Its Murine Counterpart Implications For Murine Models Of Atherosclerosis, Gunes Bender, Erin E. Schexnaydre, Robert C. Murphy, Charis Uhlson, Marcia E. Newcomer

Faculty Publications

© 2016 by The American Society for Biochemistry and Molecular Biology, Inc. The enzyme encoded by the ALOX15B gene has been linked to the development of atherosclerotic plaques in humans and in a mouse model of hypercholesterolemia. In vitro, these enzymes, which share 78% sequence identity, generate distinct products from their substrate arachidonic acid: the human enzyme, a 15-S-hydroperoxy product; and the murine enzyme, an 8-S-product. We probed the activities of these enzymes with nanodiscs as membrane mimics to determine whether they can access substrate esterified in a bilayer and characterized their activities at the membrane interface. We observed that …

Comparison Of Permanganate-Oxidizable Carbon And Mineralizable Carbon For Assessment Of Organic Matter Stabilization And Mineralization, Tunsisa T. Hurisso, Steve W. Culman, William R. Horwath, Jordon Wade, Deandra Cass, Joshua W. Beniston, Timothy M. Bowles, A. Stuart Grandy, Alan J. Franzluebbers, Meagan E. Schipanski, Shawn T. Lucas, Carmen M. Ugarte

Faculty Publications

Permanganate-oxidizable C (POXC) and mineralizable C (as determined by short-term aerobic incubation of rewetted soil) are measures of active organic matter that may provide early indication of soil C stabilization and mineralization processes. To date, the relationship between these two promising active organic matter tests has not been comprehensively evaluated, and little is known about their functional role in the soil ecosystem. Here, we examined the relationship between POXC and mineralizable C across a wide range of soil types, management histories, and geographic locations across the United States (13 studies, 76 total sites; n = 1071) and the ability of …

An Expanded Evaluation Of Protein Function Prediction Methods Shows An Improvement In Accuracy, Yuxiang Jiang, Tal Ronnen Oron, Wyatt T. Clark, Asma R. Bankapur, Daniel D'Andrea, Rosalba Lepore, Christopher S. Funk, Indika Kahanda, Karin M. Verspoor, Asa Ben-Hur, Da Chen Emily Koo, Duncan Penfold-Brown, Dennis Shasha, Noah Youngs, Richard Bonneau, Alexandra Lin, Sayed M.E. Sahraeian, Pier Luigi Martelli, Giuseppe Profiti, Rita Casadio, Renzhi Cao, Zhaolong Zhong, Jianlin Cheng, Adrian Altenhoff, Nives Skunca, Christophe Dessimoz, Tunca Dogan, Kai Hakala, Suwisa Kaewphan, Farrokh Mehryar, Tapio Salakoski, Filip Ginter, Hai Fang, Ben Smithers, Matt Oates, Julian Gough, Petri Törönen, Patrik Koskinen, Liisa Holm, Ching-Tai Chen, Wen-Lian Hsu, Kevin Bryson, Domenico Cozzetto, Federico Minneci, David T. Jones, Samuel Chapan, Dukka Bkc, Ishita K. Khan, Daisuke Kihara, Dan Ofer, Nadav Rappoport, Amos Stern, Elenia Cibrian-Uhalte, Paul Denny, Rebecca E. Foulger, Reija Hieta, Duncan Legge, Ruth C. Lovering, Michele Magrane, Anna N. Melidoni, Prudence Mutowo-Meullenet, Klemens Pichler, Aleksandra Shypitsyna, Biao Li, Pooya Zakeri, Sarah Elshal, Léon-Charles Tranchevent, Sayoni Das, Natalie L. Dawson, David Lee, Jonathan G. Lees, Ian Stilltoe, Prajwal Bhat, Tamás Nepusz, Alfonso E. Romero, Rajkumar Sasidharan, Haixuan Yang, Alberto Paccanaro, Jesse Gillis, Adriana E. Sedeño-Cortés, Paul Pavlidis, Shou Feng, Juan M. Cejuela, Tatyana Goldberg, Tobias Hamp, Lothar Richter, Asaf Salamov, Toni Gabaldon, Marina Marcet-Houben, Fran Supek, Qingtian Gong, Wei Ning, Yuanpeng Zhou, Weidong Tian, Marco Falda, Paolo Fontana, Enrico Lavezzo, Stefano Toppo, Carlo Ferrari, Manuel Giollo, Damiano Piovesan, Silvio C.E. Tosatto, Angela Del Pozo, José M. Fernández, Paolo Maietta, Alfonso Valencia, Michael L. Tress, Alfredo Benso, Stefano Di Carlo, Gianfranco Politano, Alessandro Savino, Hafeez Ur Rehman, Matteo Re, Marco Mesiti, Giorgio Valentini, Joachim W. Bargsten, Aalt D.J. Van Dijk, Branislava Gemovic, Sanja Glisic, Vladmir Perovic, Veljko Veljkovic, Nevena Veljkovic, Danillo C. Almeida-E-Silva, Ricardo Z.N. Vencio, Malvika Sharan, Jörg Vogel, Lakesh Kansakar, Shanshan Zhang, Slobodan Vucetic, Zheng Wang, Michael J.E. Sternberg, Mark N. Wass, Rachael P. Huntley, Maria J. Martin, Claire O'Donovan, Peter N. Robinson, Yves Moreau, Anna Tramontano, Patricia C. Babbitt, Steven E. Brenner, Michal Linial, Christine A. Orengo, Burkhard Rost, Casey S. Greene, Sean D. Mooney, Iddo Friedberg, Predrag Radivojac

Faculty Publications

Background: A major bottleneck in our understanding of the molecular underpinnings of life is the assignment of function to proteins. While molecular experiments provide the most reliable annotation of proteins, their relatively low throughput and restricted purview have led to an increasing role for computational function prediction. However, assessing methods for protein function prediction and tracking progress in the field remain challenging.

Results: We conducted the second critical assessment of functional annotation (CAFA), a timed challenge to assess computational methods that automatically assign protein function. We evaluated 126 methods from 56 research groups for their ability to predict …

Chlorhexidine-Induced Elastic And Adhesive Changes Of Escherichia Coli Cells Within A Biofilm, Anne E. Murdaugh, Nicole Rodgers

Faculty Publications

Chlorhexidine is a widely used, commercially available cationic antiseptic. Although its mechanism of action on planktonic bacteria has been well explored, far fewer studies have examined its interaction with an established biofilm. The physical effects of chlorhexidine on a biofilm are particularly unknown. Here, the authors report the first observations of chlorhexidine-induced elastic and adhesive changes to single cells within a biofilm. The elastic changes are consistent with the proposed mechanism of action of chlorhexidine. Atomic force microscopy and force spectroscopy techniques were used to determine spring constants and adhesion energy of the individual bacteria within an Escherichia coli biofilm. …

Survival Of High-Risk Pediatric Neuroblastoma Patients In A Developing Country, Joseph C. Easton, Sergio Gomez, Peter H. Asdahl, J. Michael Conner, Alcira B. Flynn, Claudia Ruiz, Rohit P. Ojha

Faculty Publications

Little information is available about survival of high‐risk pediatric neuroblastoma patients in developing countries. We aimed to assess survival among high‐risk pediatric neuroblastoma patients in La Plata, Argentina. Individuals eligible for our cohort were aged4 yr at diagnosis, 54% were male, and 62% had adrenal neuroblastoma. We observed 18 deaths, and the median survival time of our study population was 1.7 yr. The five‐yr overall survival probability was 24% (95% CL: 10%, 41%). In contrast, five‐yr survival of high‐risk neuroblastoma patients ranges between 23% and 76% in developed countries. Survival among high‐risk neuroblastoma patients is generally poor regardless of geographic …

Phragmites Australis As A Model Organism For Studying Plant Invasions, Laura A. Meyerson, James T. Cronin, Petr Pyšek

Faculty Publications

© 2016, Springer International Publishing Switzerland. The cosmopolitan reed grass Phragmites australis (Poaceae) is an intensively studied species globally with a substantial focus in the last two decades on its invasive populations. Here we argue that P. australis meets the criteria to serve as a model organism for studying plant invasions. First, as a dominant species in globally important wetland habitats, it has generated significant pre-existing research, demonstrating a high potential for funding. Second, this plant is easy to grow and use in experiments. Third, it grows abundantly in a wide range of ecological systems and plant communities, allowing a …

Biological Control Of Invasive Phragmites Australis Will Be Detrimental To Native P. Australis, James T. Cronin, Erik Kiviat, Laura A. Meyerson, Ganesh P. Bhattarai, Warwick J. Allen

Faculty Publications

No abstract provided.

Response To Blossey And Casagrande: Ecological And Evolutionary Processes Make Host Specificity At The Subspecies Level Exceedingly Unlikely, Ganesh P. Bhattarai, Warwick J. Allen, James T. Cronin, Erik Kiviat, Laura A. Meyerson

Faculty Publications

No abstract provided.

Characterization Of The Drosophila Beaf-32a And Beaf-32b Insulator Proteins, S. V. Satya Prakash Avva, Craig M. Hart

Faculty Publications

© 2016 Avva, Hart. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Data implicate the Drosophila 32 kDa Boundary Element-Associated Factors BEAF-32A and BEAF-32B in both chromatin domain insulator element function and promoter function. They might also function as an epigenetic memory by remaining bound to mitotic chromosomes. Both proteins are made from the same gene. They differ in their N-terminal 80 amino acids, which contain single DNA-binding BED fingers. The remaining 200 amino …

N-Terminal Lipid Modification Is Required For The Stable Accumulation Of Cyanoq In Synechocystis Sp. Pcc 6803, Andrea D. Juneau, Laurie K. Frankel, Terry M. Bricker, Johnna L. Roose

Faculty Publications

© 2016 Juneau et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. The CyanoQ protein has been demonstrated to be a component of cyanobacterial Photosystem II (PS II), but there exist a number of outstanding questions concerning its physical association with the complex. CyanoQ is a lipoprotein; upon cleavage of its transit peptide by Signal Peptidase II, which targets delivery of the mature protein to the thylakoid lumenal space, the N-terminal cysteinyl residue …

Multidimensional Solid-State Nmr Spectroscopy Of Plant Cell Walls, Tuo Wang, Pyae Phyo, Mei Hong

Faculty Publications

© 2016 Elsevier Inc. Plant biomass has become an important source of bio-renewable energy in modern society. The molecular structure of plant cell walls is difficult to characterize by most atomic-resolution techniques due to the insoluble and disordered nature of the cell wall. Solid-state NMR (SSNMR) spectroscopy is uniquely suited for studying native hydrated plant cell walls at the molecular level with chemical resolution. Significant progress has been made in the last five years to elucidate the molecular structures and interactions of cellulose and matrix polysaccharides in plant cell walls. These studies have focused on primary cell walls of growing …

Is Exposure To Macondo Oil Reflected In The Otolith Chemistry Of Marsh-Resident Fish?, Paola C. López-Duarte, F. Joel Fodrie, Olaf P. Jensen, Andrew Whitehead, Fernando Galvez, Benjamin Dubansky, Kenneth W. Able

Faculty Publications

© 2016 López-Duarte et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Genomic and physiological responses in Gulf killifish (Fundulus grandis) in the northern Gulf of Mexico have confirmed oil exposure of resident marsh fish following the Macondo blowout in 2010. Using these same fish, we evaluated otolith microchemistry as a method for assessing oil exposure history. Laser-ablation inductively-coupled-plasma mass spectrometry was used to analyze the chemical composition of sagittal otoliths to assess …

Do Ploidy Level And Nuclear Genome Size And Latitude Of Origin Modify The Expression Of Phragmites Australis Traits And Interactions With Herbivores?, Laura A. Meyerson, James T. Cronin, Ganesh P. Bhattarai, Hans Brix, Carla Lambertini, Magdalena Lučanová, Shelby Rinehart, Jan Suda, Petr Pyšek

Faculty Publications

© 2016, Springer International Publishing Switzerland. We studied the relationship between genome size and ploidy level variation and plant traits for the reed grass Phragmites australis. Using a common garden approach on a global collection of populations in Aarhus, Denmark, we investigated the influence of monoploid genome size and ploidy level on the expression of P. australis growth, nutrition and herbivore-defense traits and whether monoploid genome size and ploidy level play different roles in plant trait expression. We found that both monoploid genome size and latitude of origin contributed to variation in traits that we studied for P. australis, with …

The Macroecology Of Infectious Diseases: A New Perspective On Global-Scale Drivers Of Pathogen Distributions And Impacts, Patrick R. Stephens, Sonia Altizer, Katherine F. Smith, A. Alonso Aguirre, James H. Brown, Sarah A. Budischak, James E. Byers, Tad A. Dallas, T. Jonathan Davies, John M. Drake, Vanessa O. Ezenwa, Maxwell J. Farrell, John L. Gittleman, Barbara A. Han, Shan Huang, Rebecca A. Hutchinson, Pieter Johnson, Charles L. Nunn, David Onstad, Andrew Park, Gonzalo M. Vazquez-Prokopec, John P. Schmidt, Robert Poulin

Faculty Publications

© 2016 John Wiley & Sons Ltd/CNRS. Identifying drivers of infectious disease patterns and impacts at the broadest scales of organisation is one of the most crucial challenges for modern science, yet answers to many fundamental questions remain elusive. These include what factors commonly facilitate transmission of pathogens to novel host species, what drives variation in immune investment among host species, and more generally what drives global patterns of parasite diversity and distribution? Here we consider how the perspectives and tools of macroecology, a field that investigates patterns and processes at broad spatial, temporal and taxonomic scales, are expanding scientific …

Host-Induced Silencing Of Fusarium Culmorum Genes Protects Wheat From Infection, Wanxin Chen, Christine Kastner, Daniela Nowara, Ely Oliveira-Garcia, Twan Rutten, Yusheng Zhao, Holger B. Deising, Jochen Kumlehn, Patrick Schweizer

Faculty Publications

Plants producing antisense or double-stranded RNA molecules that target specific genes of eukaryotic pests or pathogens can become protected from their attack. This beneficial effect was also reported for plant-fungus interactions and is believed to reflect uptake of the RNAs by the fungus via an as yet unknown mechanism, followed by target gene silencing. Here we report that wheat plants pre-infected with Barley stripe mosaic virus (BSMV) strains containing antisense sequences against target genes of the Fusarium head blight (FHB) fungus F. culmorum caused a reduction of corresponding transcript levels in the pathogen and reduced disease symptoms. Stable transgenic wheat …

Impact Of Ground-Applied Termiticides On The Above-Ground Foraging Behavior Of The Formosan Subterranean Termite, Gregg Henderson, Bal K. Gautam, Cai Wang

Faculty Publications

We conducted a laboratory study to determine the impact of ground-applied termiticides on the above-ground foraging behavior of Coptotermes formosanus. Two concentrations (1 and 10 ppm) each of three termiticides, viz. fipronil, imidacloprid and chlorantraniliprole, were tested. After one month post-treatment (fipronil 10 ppm was run for 12 days only and all other treatments were run for one month), fipronil had the lowest percentage of survival (3%-4%) at both concentrations. Termite survival ranged from 31% to 40% in the case of imidacloprid treatments and 10 ppm chlorantraniliprole. However, 1 ppm chlorantraniliprole did not cause significant mortality compared to the controls. …

Altered Developmental Trajectories For Impulsivity And Sensation Seeking Among Adolescent Substance Users, Nora E. Charles, Stacy R. Ryan, Bethany C. Bray, Charles W. Mathias, Ashley Acheson, Donald M. Doherty

Faculty Publications

A number of studies have associated impulsivity and sensation seeking with level of substance use and risk for developing a substance use disorder. These relationships may be particularly apparent during adolescence, when developmental changes in impulsivity and sensation seeking occur at the same time as increased opportunities for substance use. To examine this, the current study measured impulsivity and sensation seeking from pre-adolescence to mid-adolescence in a sample of youth, the majority of whom were identified as being at risk for developing a substance use disorder based on their family history of substance use disorders. Youth were separated into those …

Sequence Capture Versus Restriction Site Associated Dna Sequencing For Shallow Systematics, Michael G. Harvey, Brian Tilston Smith, Travis C. Glenn, Brant C. Faircloth, Robb T. Brumfield

Faculty Publications

© 2016 The Author(s). Sequence capture and restriction site associated DNA sequencing (RAD-Seq) are two genomic enrichment strategies for applying next-generation sequencing technologies to systematics studies. At shallow timescales, such as within species, RAD-Seq has been widely adopted among researchers, although there has been little discussion of the potential limitations and benefits of RAD-Seq and sequence capture. We discuss a series of issues that may impact the utility of sequence capture and RAD-Seq data for shallow systematics in non-model species. We review prior studies that used both methods, and investigate differences between the methods by re-analyzing existing RAD-Seq and sequence …

Population Genetic Structure Of Apple Scab (Venturia Inaequalis (Cooke) G. Winter) In Iran, Leila Ebrahimi, Khalil Berdi Fotuhifar, Mohammad Javan Nikkhah, Mohammad Reza Naghavi, Niranjan Baisakh

Faculty Publications

The population genetic structure of 278 Venturia inaequalis isolates, collected from different apple cultivars of eighteen different provinces in Iran, was investigated using 22 polymorphic microsatellite markers. Analysis of molecular variation, Bayesian clustering and Nei's genetic distance analyses based on 88 microsatellite alleles indicated substantial levels of gene flow among the collection sites. Ninety three percent of the variation was observed among the individuals within the populations and only 7% variation was observed among the populations. Structure analysis grouped the isolates into two populations. Maximum number of pathogen genotypes (44) was observed in the North of Iran that grows various …

Uranium Isotope Fractionation During Coprecipitation With Aragonite And Calcite, Xinming Chen, Stephen J. Romaniello, Achim D. Herrmann, Laura E. Wasylenki, Ariel D. Anbar

Faculty Publications

© 2016 Elsevier Ltd. Natural variations in 238U/235U of marine calcium carbonates might provide a useful way of constraining redox conditions of ancient environments. In order to evaluate the reliability of this proxy, we conducted aragonite and calcite coprecipitation experiments at pH ~7.5 and ~8.5 to study possible U isotope fractionation during incorporation into these minerals.Small but significant U isotope fractionation was observed in aragonite experiments at pH ~8.5, with heavier U isotopes preferentially enriched in the solid phase. 238U/235U of dissolved U in these experiments can be fit by Rayleigh fractionation curves with fractionation factors of 1.00007 + 0.00002/-0.00003, …

Is This Relevant? Physician Perceptions, Clinical Relevance, And Religious Content In Clinical Interactions, Aaron B. Franzen

Faculty Publications

Despite wide support among physicians for practicing patient-centered care, clinical interactions are primarily driven by physicians’ perception of relevance. While some will perceive a connection between religion and patient health, this relevance will be less apparent for others. I argue that physician responses when religious/spiritual topics come up during clinical interactions will depend on their own religious/spiritual background. The more central religion is for the physician, the greater his or her perception of religion's impact on health outcomes and his or her inclusion of religion/spirituality within clinical interactions. Using a nationally representative sample of physicians in the United States and …

Detecting Precontact Anthropogenic Microtopographic Features In A Forested Landscape With Lidar: A Case Study From The Upper Great Lakes Region, Ad 1000-1600, Meghan L. Howey, Franklin B. Sullivan, Jason Tallant, Robert Vande Kopple, Michael W. Palace

Faculty Publications

Forested settings present challenges for understanding the full extent of past human landscape modifications. Field-based archaeological reconnaissance in forests is low-efficiency and most remote sensing techniques are of limited utility, and together, this means many past sites and features in forests are unknown. Archaeologists have increasingly used light detection and ranging (lidar), a remote sensing tool that uses pulses of light to measure reflecting surfaces at high spatial resolution, to address these limitations. Archaeology studies using lidar have made significant progress identifying permanent structures built by large-scale complex agriculturalist societies. Largely unaccounted for, however, are numerous small and more practical …

Cannabis-Related Episodic Memory Deficits And Hippocampal Morphological Differences In Healthy Individuals And Schizophrenia Subjects, Derin J. Cobia, Matthew J. Smith, James L. Reilly, Jodi Gilman, Andrea G. Roberts, Kathryn I. Alpert, Lei Wang, Hans C. Breiter, John G. Csernansky

Faculty Publications

Cannabis use has been associated with episodic memory (EM) impairments and abnormal hippocampus morphology among both healthy individuals and schizophrenia subjects. Considering the hippocampus' role in EM, research is needed to evaluate the relationship between cannabis-related hippocampal morphology and EM among healthy and clinical groups. We examined differences in hippocampus morphology between control and schizophrenia subjects with and without a past (not current) cannabis use disorder (CUD). Subjects group-matched on demographics included 44 healthy controls (CON), 10 subjects with a CUD history (CON-CUD), 28 schizophrenia subjects with no history of substance use disorders (SCZ), and 15 schizophrenia subjects with a …

River Discharge: In State Of The Climate In 2015., R. M. Holmes, Alexander I. Shiklomanov, Suzanne E. Tank, James W. Mcclelland, M. Tretiakov

Faculty Publications

No abstract provided.

Epstein-Barr Viral Micrornas Target Caspase 3, Cecelia Harold, Diana Cox, Kasandra J. Riley

Faculty Publications

The Epstein-Barr virus (EBV) is a ubiquitous herpesvirus that transforms B cells and causes several malignancies including Burkitt’s lymphoma. EBV differentially expresses at least 49 mature microRNAs (miRNAs) during latency in various infected epithelial and B cells. Recent high-throughput studies and functional assays have begun to reveal the function of the EBV miRNAs suggesting roles in latency, cell cycle control, and apoptosis. In particular, the central executioner of apoptosis, Caspase 3 (CASP3), was proposed as a target of select EBV miRNAs. However, whether CASP3 is truly a target of EBV miRNAs, and if so, which specific miRNAs target CASP3 is …

An Ultrasensitive Electrogenerated Chemiluminescence-Based Immunoassay For Specific Detection Of Zika Virus, Dhiraj Acharya, Pradip Bastola, Linda Le, Amber M. Paul, Estefania Fernandez, Michael S. Diamond, Wujian Miao, Fengwei Bai

Faculty Publications

Zika virus (ZIKV) is a globally emerging mosquito-transmitted flavivirus that can cause severe fetal abnormalities, including microcephaly. As such, highly sensitive, specific, and cost-effective diagnostic methods are urgently needed. Here, we report a novel electrogenerated chemiluminescence (ECL)-based immunoassay for ultrasensitive and specific detection of ZIKV in human biological fluids. We loaded polystyrene beads (PSB) with a large number of ECL labels and conjugated them with anti-ZIKV monoclonal antibodies to generate anti-ZIKV-PSBs. These anti-ZIKV-PSBs efficiently captured ZIKV in solution forming ZIKV-anti-ZIKV-PSB complexes, which were subjected to measurement of ECL intensity after further magnetic beads separation. Our results show that the anti-ZIKV-PSBs …

Crystal Structure Of Carboxyltransferase From Staphylococcus Aureus Bound To The Antibacterial Agent Moiramide B, Molly A. Silvers, Svetlana Pakhomova, David B. Neau, William C. Silvers, Nicholas Anzalone, Carol M. Taylor, Grover L. Waldrop

Faculty Publications

© 2016 American Chemical Society. The dramatic increase in the prevalence of antibiotic-resistant bacteria has necessitated a search for new antibacterial agents against novel targets. Moiramide B is a natural product, broad-spectrum antibiotic that inhibits the carboxyltransferase component of acetyl-CoA carboxylase, which catalyzes the first committed step in fatty acid synthesis. Herein, we report the 2.6 Å resolution crystal structure of moiramide B bound to carboxyltransferase. An unanticipated but significant finding was that moiramide B bound as the enol/enolate. Crystallographic studies demonstrate that the (4S)-methyl succinimide moiety interacts with the oxyanion holes of the enzyme, supporting the notion that an …

Examining The Effects Of Chromatic Aberration, Object Distance, And Eye Shape On Image-Formation In The Mirror-Based Eyes Of The Bay Scallop Argopecten Irradians, Daniel Isaac Speiser, Yakir Luc Gagnon, Raghav K. Chhetri, Amy L. Oldenburg, Sönke Johnsen

Faculty Publications

The eyes of scallops form images using a concave spherical mirror and contain two separate retinas, one layered on top of the other. Behavioral and electrophysiological studies indicate that the images formed by these eyes have angular resolutions of about 2°. Based on previous ray-tracing models, it has been thought that the more distal of the two retinas lies near the focal point of the mirror and that the proximal retina, positioned closer to the mirror at the back of the eye, receives light that is out-of-focus. Here, we propose three mechanisms through which both retinas may receive focused light: …

Examining The Effects Of Chromatic Aberration, Object Distance, And Eye Shape On Image-Formation In The Mirror-Based Eyes Of The Bay Scallop Argopecten Irradians, Daniel Isaac Speiser, Yakir Luc Gagnon, Raghav K. Chhetri, Amy L. Oldenburg, Sönke Johnsen

Faculty Publications

The eyes of scallops form images using a concave spherical mirror and contain two separate retinas, one layered on top of the other. Behavioral and electrophysiological studies indicate that the images formed by these eyes have angular resolutions of about 28. Based on previous ray-tracing models, it has been thought that the more distal of the two retinas lies near the focal point of the mirror and that the proximal retina, positioned closer to the mirror at the back of the eye, receives light that is out-of-focus. Here, we propose three mechanisms through which both retinas may receive focused light: …