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Mobile Dna Elements In Primate And Human Evolution, Jinchuan Xing, David J. Witherspoon, David A. Ray, Mark A. Batzer, Lynn B. Jorde Dec 2007

Mobile Dna Elements In Primate And Human Evolution, Jinchuan Xing, David J. Witherspoon, David A. Ray, Mark A. Batzer, Lynn B. Jorde

Faculty Publications

Roughly 50% of the primate genome consists of mobile, repetitive DNA sequences such as Alu and LINE1 elements. The causes and evolutionary consequences of mobile element insertion, which have received considerable attention during the past decade, are reviewed in this article. Because of their unique mutational mechanisms, these elements are highly useful for answering phylogenetic questions. We demonstrate how they have been used to help resolve a number of questions in primate phylogeny, including the human-chimpanzee- gorilla trichotomy and New World primate phylogeny. Alu and LINE1 element insertion polymorphisms have also been analyzed in human populations to test hypotheses about …


The Barbarous Voice Of Democracy: American Captivity In Barbary And The Multicultural Specter, Jacob Rama Berman Dec 2007

The Barbarous Voice Of Democracy: American Captivity In Barbary And The Multicultural Specter, Jacob Rama Berman

Faculty Publications

No abstract provided.


Adtrees For Sequential Data And N-Gram Counting, Robert Van Dam, Dan A. Ventura Oct 2007

Adtrees For Sequential Data And N-Gram Counting, Robert Van Dam, Dan A. Ventura

Faculty Publications

We consider the problem of efficiently storing n-gram counts for large n over very large corpora. In such cases, the efficient storage of sufficient statistics can have a dramatic impact on system performance. One popular model for storing such data derived from tabular data sets with many attributes is the ADtree. Here, we adapt the ADtree to benefit from the sequential structure of corpora-type data. We demonstrate the usefulness of our approach on a portion of the well-known Wall Street Journal corpus from the Penn Treebank and show that our approach is exponentially more efficient than the naïve approach to …


Envisioning The Constitution, Thomas P. Crocker Oct 2007

Envisioning The Constitution, Thomas P. Crocker

Faculty Publications

If one of the more persistent problems of constitutional interpretation, particularly of the Bill of Rights, is that we lack a clear view of it, then it would appear that how we see the Constitution is as important as how we read it. What clauses we see as connected in order to form comprehensive values, such as federalism or rights protections, are not so much products of constitutional interpretation as constitutional vision. To obtain a view of the Constitution, we have to do more than derive semantic meaning from diverse articles and clauses. To have a vision of the Constitution …


Toward A Population Health Model Of Segmented Assimilation: The Case Of Low Birth Weight In Los Angeles, Brian K. Finch, Nelson Lim, William Perez, D. Phuong Do Oct 2007

Toward A Population Health Model Of Segmented Assimilation: The Case Of Low Birth Weight In Los Angeles, Brian K. Finch, Nelson Lim, William Perez, D. Phuong Do

Faculty Publications

The authors adapt the segmented assimilation theory to a model population health, which posits that assimilation is actually harmful to migrants' health. The authors also specify models of individual and contextual factors to indirectly test the theory of segmented assimilation - a theory that posits interactions between individual and residential circumstances. Using Year 2000 vital statistics data merged with 2000 U.S. census data from Los Angeles County, the authors model the probability of being born low birth weight among the native and foreign born. Results confirm an immigrant advantage at the individual level and protective effects of immigrant coresidence at …


Toward The Fulfillment Of The Gog And Magog Prophecy Of Ezekiel 38-39, Jiri Moskala Oct 2007

Toward The Fulfillment Of The Gog And Magog Prophecy Of Ezekiel 38-39, Jiri Moskala

Faculty Publications

No abstract provided.


Provincial Development In China: Lessons From Eu Regional Policy Experience, Phillip J. Bryson, Keren Sun Sep 2007

Provincial Development In China: Lessons From Eu Regional Policy Experience, Phillip J. Bryson, Keren Sun

Faculty Publications

Regional development in the Chinese provinces and in the regions of the EU countries are evaluated and compared. Development efforts in southern Italy, northeast England and eastern Germany are reviewed along with EU, Community-wide regional development programs. Equity concerns suggest promotion of regional policy, but the pursuit of maximum national economic growth would avoid it, since it sacrifices some economic growth. The impact of FDI and domestic investments on individual Chinese provinces is compared with their impact in Europe. There is an implicit contrast between public sector regional development programs and more effective private foreign direct investments.


Sympathy And The Non-Human: Max Scheler’S Phenomenology Of Interrelation, David Dillard-Wright Sep 2007

Sympathy And The Non-Human: Max Scheler’S Phenomenology Of Interrelation, David Dillard-Wright

Faculty Publications

German phenomenologist and sociologist Max Scheler accorded sympathy a central role in his philosophy, arguing that sympathy enables not only ethical behaviour, but also knowledge of animate and inanimate others. Influenced by Catholicism and especially St Francis, Scheler envisioned a broad, cosmic sympathy forming the hidden basis for all human values, with the “higher” religious, artistic, philosophic and other cultural values enabled by a more basic regard for non-human nature and insights gained from the human situation within the non-human world. Sympathy for the non-human is thus both integral and fundamental to the cultivation of other values in the development …


Gis Aided Archaeological Research Of El Camino Real De Los Tejas With Focus On The Landscape And River Crossings Along El Camino Carretera., Jeffrey M. Williams Aug 2007

Gis Aided Archaeological Research Of El Camino Real De Los Tejas With Focus On The Landscape And River Crossings Along El Camino Carretera., Jeffrey M. Williams

Faculty Publications

Many generations of indigenous pathways through the forests of eastern Texas have their origins obscured in antiquity. Utilized by early European explorers, these pathways became modified through heavy use and the expansions and improvements needed to accommodate easy passage of European horses and carts and finally the heavy wagons of Anglo-American settlers. The first road through Texas, El Camino Real de Los Tejas, utilized portions of these early trails.

El Camino Carretera (known as the cart road) is an early segment of El Camino Real de los Tejas that crossed the Sabine River at the boundary between Texas and Louisiana. …


Assessment Of Genetic Diversity In The Usda And Cip-Fao International Nursery Collections Of Quinoa (Chenopodium Quinoa Willd.) Using Microsatellite Markers, S. A. Christensen, D. B. Pratt, C. Pratt, P. T. Nelson, M. R. Stevens, Eric N. Jellen, Craig E. Coleman, Daniel J. Fairbanks, A. Bonifacio, Michael J. Maughan Aug 2007

Assessment Of Genetic Diversity In The Usda And Cip-Fao International Nursery Collections Of Quinoa (Chenopodium Quinoa Willd.) Using Microsatellite Markers, S. A. Christensen, D. B. Pratt, C. Pratt, P. T. Nelson, M. R. Stevens, Eric N. Jellen, Craig E. Coleman, Daniel J. Fairbanks, A. Bonifacio, Michael J. Maughan

Faculty Publications

Quinoa (Chenopodium quinoa Willd.) is a staple food crop for millions of impoverished rural inhabitants of Andean South America where it has been cultivated for millennia. Interest in quinoa, due largely to its superior nutritional characteristics, is fuelling a growing export market and has led to an increased focus on genetic research and the development of quinoa breeding programmes throughout South America. The success of these breeding programmes will rely heavily on the development of core germplasm collections and germplasm conservation. We report the development of a set of fluorescence-tagged microsatellite molecular markers that can be used to characterize genetic …


Elusive Identities: Indigeneity And Nation - States In Central America, David Carey Jul 2007

Elusive Identities: Indigeneity And Nation - States In Central America, David Carey

Faculty Publications

No abstract provided.


A Constitutional Conundrum Of Second Amendment Commas, William W. Van Alstyne Jul 2007

A Constitutional Conundrum Of Second Amendment Commas, William W. Van Alstyne

Faculty Publications

Prompted by the court’s decision in Parker v. District of Columbia, this series of correspondence discusses the effect possible forms of punctuation may have on the Second Amendment. The article makes comments on the important grammars during the founding and also two possible writings of the Second Amendment that contain different sets of punctuation.


Zouave Stories: Gender, Catholic Spirituality, And French Responses To The Roman Question, Carol E. Harrison Jun 2007

Zouave Stories: Gender, Catholic Spirituality, And French Responses To The Roman Question, Carol E. Harrison

Faculty Publications

No abstract provided.


Membership In A Particular Social Group: International Journalists And U.S. Asylum Law, Edward L. Carter, Brad Clark Jun 2007

Membership In A Particular Social Group: International Journalists And U.S. Asylum Law, Edward L. Carter, Brad Clark

Faculty Publications

At least thirty non-U.S. journalists in the last decade have argued in U.S. Courts of Appeal that U.S. immigration authorities erroneously denied their asylum applications based on persecution in their native countries. ... Still, journalists persecuted in their home countries for their journalism work might better fit the statutory qualifications for asylum --primarily persecution on account of race, religion, nationality, political opinion or membership in a "particular social group"--than the U.S. immigration system sometimes acknowledges. ... Finally, and most importantly, the asylum seeker bears the burden to establish that he or she is unable or unwilling to return to his …


Active Learning For Part-Of-Speech Tagging: Accelerating Corpus Annotation, George Busby, Marc Carmen, James Carroll, Robbie Haertel, Deryle W. Lonsdale, Peter Mcclanahan, Eric K. Ringger, Kevin Seppi Jun 2007

Active Learning For Part-Of-Speech Tagging: Accelerating Corpus Annotation, George Busby, Marc Carmen, James Carroll, Robbie Haertel, Deryle W. Lonsdale, Peter Mcclanahan, Eric K. Ringger, Kevin Seppi

Faculty Publications

In the construction of a part-of-speech annotated corpus, we are constrained by a fixed budget. A fully annotated corpus is required, but we can afford to label only a subset. We train a Maximum Entropy Markov Model tagger from a labeled subset and automatically tag the remainder. This paper addresses the question of where to focus our manual tagging efforts in order to deliver an annotation of highest quality. In this context, we find that active learning is always helpful. We focus on Query by Uncertainty (QBU) and Query by Committee (QBC) and report on experiments with several baselines and …


Active Sovereignty, Timothy Zick Apr 2007

Active Sovereignty, Timothy Zick

Faculty Publications

No abstract provided.


Maya And Nahuatl In The Teaching Of Spanish, Anne Fountain, Catherine Fountain Mar 2007

Maya And Nahuatl In The Teaching Of Spanish, Anne Fountain, Catherine Fountain

Faculty Publications

No abstract provided.


Situating Accountability: Seeking Salvation For The Core Concept Of Modern Governance, Melvin J. Dubnick Feb 2007

Situating Accountability: Seeking Salvation For The Core Concept Of Modern Governance, Melvin J. Dubnick

Faculty Publications

The obsessive and extensive attention given to “accountability” over the past several years has not been matched by sufficient attention to the concept’s place and role in modern governance. Its undisciplined application in rhetorical, critical and analytic contexts has reduced the concept to a pointless and free-floating label that has lost its value as a meaningful term of art in the study of government and political life. This paper is an effort to remedy that circumstance – to seek a form of “salvation” for the idea of accountability by engaging in an effort to “situate” the concept linguistically, functionally, historically …


Human–Robot Interaction: A Survey, Michael A. Goodrich, Alan C. Schultz Feb 2007

Human–Robot Interaction: A Survey, Michael A. Goodrich, Alan C. Schultz

Faculty Publications

Human–Robot Interaction (HRI) has recently received considerable attention in the academic community, in labs, in technology companies, and through the media. Because of this attention, it is desirable to present a survey of HRI to serve as a tutorial to people outside the field and to promote discussion of a unified vision of HRI within the field. The goal of this review is to present a unified treatment of HRI-related problems, to identify key themes, and discuss challenge problems that are likely to shape the field in the near future. Although the review follows a survey structure, the goal of …


From Alps To Alpnet (And Beyond), Deryle W. Lonsdale Jan 2007

From Alps To Alpnet (And Beyond), Deryle W. Lonsdale

Faculty Publications

Nestled in the Wasatch range of the Rocky Mountains in northern Utah lies scenic Utah Valley. Home to Brigham Young University (BYU) and a host of foreign-speaking residents, the setting also served as a hotbed throughout the 1980's for the machine translation (MT) industry. To fully appreciate this narrative the chronologically prior story of BYU's Translation Sciences Institute (TSI)—which has not yet been written— would need to be consulted. When the Church1 withdrew funding for the project, the TSI team disbanded. Some former participants remained at BYU, others left the university to work for industrial corporations, and the majority remained …


Second Language Acquisition From A Mcneillian Perspective, Gale Stam Jan 2007

Second Language Acquisition From A Mcneillian Perspective, Gale Stam

Faculty Publications

Most second language acquisition research has concentrated on learners’ speech. This paper argues that it is necessary to look at both learners’ speech and gesture in order to better understand second language acquisition. It provides a summary of the second language acquisition process and the types of studies that have been conducted in the field. It discusses how gesture can be used to investigate learners’ thinking for speaking.


Tolerance And Democracy Instead Of Fundamentalism And Empire, Guillermo C. Hansen Jan 2007

Tolerance And Democracy Instead Of Fundamentalism And Empire, Guillermo C. Hansen

Faculty Publications

No abstract provided.


A Reformation Is A Terrible Thing To Waste: A Promising Theology For An Emerging Missional Church, Gary M. Simpson Jan 2007

A Reformation Is A Terrible Thing To Waste: A Promising Theology For An Emerging Missional Church, Gary M. Simpson

Faculty Publications

No abstract provided.


Ecclesial Communion, God's Publicity And Global Citizenship, Gary M. Simpson Jan 2007

Ecclesial Communion, God's Publicity And Global Citizenship, Gary M. Simpson

Faculty Publications

No abstract provided.


Tolerance And Democracy Instead Of Fundamentalism And Empire, Guillermo C. Hansen Jan 2007

Tolerance And Democracy Instead Of Fundamentalism And Empire, Guillermo C. Hansen

Faculty Publications

No abstract provided.


Teacher-Written Feedback: Student Perceptions, Teacher Self-Assessment, And Actual Teacher Performance, Wendy Baker, Julie L. Montgomery Jan 2007

Teacher-Written Feedback: Student Perceptions, Teacher Self-Assessment, And Actual Teacher Performance, Wendy Baker, Julie L. Montgomery

Faculty Publications

Most research in second language (L2) writing has focused on students’ perceptions more than teachers’ self-assessment of teacher-written feedback. This study’s purpose was to investigate: (1) how much local and global written feedback teachers give, (2) how their self-assessments and students’ perceptions of this feedback coordinate, and (3) how well teachers’ self-assessments match their actual performance. Teachers and students in an intensive English as a second language (ESL) program were surveyed about their perceptions of teacher written feedback on compositions. These surveys were compared to teachers’ actual written feedback. Results indicated that teachers’ self-assessments and student perceptions of teacher-written feedback …


Why Learning French First Is Better Than Learning German First, Wendy Baker-Smemoe, Laura Catharine Smith Jan 2007

Why Learning French First Is Better Than Learning German First, Wendy Baker-Smemoe, Laura Catharine Smith

Faculty Publications

This study investigated whether differences in cross-language similarity between English-French and English-German vowels would translate into differences in accurately identifying and discriminating French and German vowels (i.e., Iii, /y/, and /u/). In addition, this study investigated whether these same differences in cross-language perception would also translate into differences in accurately identifying and discriminating vowels in a novel third language. The results suggest that learners exposed to a language with a greater perceived difference with the LI are more able to generalize their perception of their L2 vowels to a novel L3.


Judges As Humans: Interdisciplinary Research And The Problems Of Institutional Design, Chad M. Oldfather Jan 2007

Judges As Humans: Interdisciplinary Research And The Problems Of Institutional Design, Chad M. Oldfather

Faculty Publications

The article takes up the question of how best to put the increasing amount of interdisciplinary scholarship on courts and judges to work in service of institutional design and reform. The analysis focuses on the analysis from a recent book, Judges and Their Audiences: A Perspective on Judicial Behavior, by Lawrence Baum. The book provides an appropriate vehicle for this analysis because of what might be called its multi-interdisciplinarity. In it, Baum, a political scientist, draws on social psychology to critique political science models of judicial behavior.

I argue that analyses such as Baum's are important not only for their …


The Underlying Causes Of Divergent First Amendment Interpretations, Scott C. Idleman Jan 2007

The Underlying Causes Of Divergent First Amendment Interpretations, Scott C. Idleman

Faculty Publications

No abstract provided.


A Tribute To Roger Groot, Frank O. Bowman Iii Jan 2007

A Tribute To Roger Groot, Frank O. Bowman Iii

Faculty Publications

A Tribute to Roger Groot