Digital Commons Network^™

Development And Field Testing Of An Interactive Transit Station Information System (Itsis) Using Connected Vehicle Technologies, Huadong Meng, Jacob Tsao, Kun Zhou, Justin Picar, Bradley Mizuno, Wei-Bin Zhang

Faculty Publications

The objective of Interactive Transit Station Information System (ITSIS) is to better inform transit travelers during their trips and to enable dynamic transit operations to better serve travelers. The ultimate goal is to make transit more friendly and attractive to the traveling population such that transit will become a viable choice for travel and an integrated part of the solution for congestion relief. This report documents a research effort to develop and test a ITSIS prototype that uses Connected Vehicle technologies to enable the real-time interaction between passengers and transit systems at bus stations. The reports summarizes the findings from …

Comparison Of Ecosystem Processes In A Woodland And Prairie Pond With Different Hydroperiods, Daniel J. Hornbach, Mark C. Hove, Mira W. Ensley-Field, Matthew R. Glasenapp, Ian A. Goodbar, J. Douglas Harman, Benjamin D. Huber, Emily A. Kangas, Kira X. Liu, Molly Stark-Ragsdale, Long K. Tran

Faculty Publications

Shallow lakes and ponds constitute a significant number of water bodies worldwide. Many are heterotrophic, indicating that they are likely net contributors to global carbon cycling. Climate change is likely to have important impacts on these waterbodies. In this study, we examined two small Minnesota ponds; a permanent woodland pond and a temporary prairie pond. The woodland pond had lower levels of phosphorus and phytoplankton than the prairie pond. Using the open water oxygen method, we found the prairie pond typically had a higher level of gross primary production (GPP) and respiration (R) than the woodland pond, although the differences …

Fenugreek Supplementation During High-Fat Feeding Improves Specific Markers Of Metabolic Health, Eric J. Knott, Allison J. Richard, Randall L. Mynatt, David Ribnicky, Jacqueline M. Stephens, Annadora Bruce-Keller

Faculty Publications

© 2017 The Author(s). To assess the metabolically beneficial effects of fenugreek (Trigonella foenum-graecum), C57BL/6J mice were fed a low- or high-fat diet for 16 weeks with or without 2% (w/w) fenugreek supplementation. Body weight, body composition, energy expenditure, food intake, and insulin/glucose tolerance were measured regularly, and tissues were collected for histological and biochemical analysis after 16 weeks of diet exposure. Fenugreek did not alter body weight, fat mass, or food intake in either group, but did transiently improve glucose tolerance in high fat-fed mice. Fenugreek also significantly improved high-density lipoprotein to low-density lipoprotein ratios in high fat-fed mice …

Swim Bladder Morphology Changes With Female Reproductive State In The Mouth-Brooding African Cichlid Astatotilapia Burtoni, Julie M. Butler, Sarah M. Whitlow, Anwei P. Gwan, Prosanta Chakrabarty, Karen P. Maruska

Faculty Publications

© 2017. Published by The Company of Biologists Ltd. Journal of Experimental Biology. Mouth brooding is an extreme form of parental care in which the brooding parent carries the developing young in their buccal cavity for the duration of development. Brooding fish need to compensate for the brood weight on the anterior portion of their body. For fishes with a compartmentalized swim bladder, gas distribution between the chambers may aid in regulating buoyancy during brooding. To test this hypothesis, we took radiographs of Astatotilapia burtoni to compare the swim bladder morphology of gravid, mouth-brooding and recovering females. Following spawning, females …

Intramyocellular Lipid Droplet Size Rather Than Total Lipid Content Is Related To Insulin Sensitivity After 8 Weeks Of Overfeeding, Jeffrey D. Covington, Darcy L. Johannsen, Paul M. Coen, David H. Burk, Diana N. Obanda, Philip J. Ebenezer, Charmaine S. Tam, Bret H. Goodpaster, Eric Ravussin, Sudip Bajpeyi

Faculty Publications

© 2017 The Obesity Society Objective: Intramyocellular lipid (IMCL) is inversely related to insulin sensitivity in sedentary populations, yet no prospective studies in humans have examined IMCL accumulation with overfeeding. Methods: Twenty-nine males were overfed a high-fat diet (140% caloric intake, 44% from fat) for 8 weeks. Measures of IMCL, whole-body fat oxidation from a 24-hour metabolic chamber, muscle protein extracts, and muscle ceramide measures were obtained before and after the intervention. Results: Eight weeks of overfeeding did not increase overall IMCL. The content of smaller lipid droplets peripherally located in the myofiber decreased, while increases in larger droplets correlated …

Incorporating Flaxseed (Linum Usitatissimum) Oil Into Queso Blanco At Different Stages Of The Cheese Manufacturing Process, Cristhiam Gurdian, Vondel Reyes, Emmanuel Kyereh, Franklin Bonilla, Cesar Galindo, Alexander Chouljenko, Kevin Mis Solval, Charles Boeneke, Joan M. King, Subramaniam Sathivel

Faculty Publications

The objective of this study was to evaluate the physicochemical and microbial properties of queso blanco (QB) with flaxseed oil (FO) incorporated at different stages of the cheese manufacturing process. Whole milk was homogenized, coagulated with citric acid, salted with NaCl, and the resulting curds were pressed. Then QBFO was produced by incorporating FO during homogenization (QBFO-H), coagulation (QBFO-C), or salting (QBFO-S). The cheeses were stored at 8 °C for 30 days. Significantly lower lipid oxidation in QB was observed when FO was added during coagulation or salting compared to homogenization. However, lipid oxidation values of QBFO-H did not exceed …

Comparison Of Five Methods For Parameter Estimation Under Taylor's Power Law, Peijian Shi, David A. Ratkowsky, Ningtao Wang, Yang Li, Lei Zhao, Gadi V.P. Reddy, Bai Lian Li

Faculty Publications

Taylor's power law (TPL) can be applied to the mean-variance relationship for various quantities, e.g., population densities over space and time, biomass of plants in the growth processes, developmental rates and growth rates of arthropods at different temperatures, etc. When TPL holds in the grouped data (e.g., the biomass of plants at different investigation times with limited replicates at each investigation), we must consider the heterocedasticity when carrying out the parameter estimation for a given mathematical model. We propose two new target functions based on TPL and attempt to more accurately estimate the model parameter(s). By capturing the mean-variance relationship, …

Challenges In Development Of Sperm Repositories For Biomedical Fishes: Quality Control In Small-Bodied Species, Leticia Torres, Yue Liu, Amy Guitreau, Huiping Yang, Terrence R. Tiersch

Faculty Publications

Quality control (QC) is essential for reproducible and efficient functioning of germplasm repositories. However, many biomedical fish models present significant QC challenges due to small body sizes (<5 >cm) and miniscule sperm volumes (<5 >μL). Using minimal volumes of sperm, we used Zebrafish to evaluate common QC endpoints as surrogates for fertilization success along sequential steps of cryopreservation. First, concentrations of calibration bead suspensions were evaluated with a Makler® counting chamber by using different sample volumes and mixing methods. For sperm analysis, samples were initially diluted at a 1:30 ratio with Hanks' balanced salt solution (HBSS). Motility was evaluated by …

Effect Of Lactation On Conceptus-Maternal Interactions At The Initiation Of Implantation In Cattle: I. Effects On The Conceptus Transcriptome And Amino Acid Composition Of The Uterine Luminal Fluid, Niamh Forde, Constantine A. Simintiras, Roger G. Sturmey, Alexander Graf, Eckhard Wolf, Helmut Blum, Pat Lonergan

Faculty Publications

Approximately 65-75 days postpartum (dpp), the estrous cycles of nonlactating (dried off immediately postpartum: n = 12) and lactating (n = 13) Holstein Friesian cows were synchronized and on day 7 a single blastocyst derived from superovulated nulliparous Holstein Friesian heifers was transferred to each cow. A control group of nulliparous heifers (n = 8) were synchronized, inseminated to a standing heat, and slaughtered on the same day as nonlactating and lactating recipients (day 19; estrus = day 0). The uterine horn ipsilateral to the corpus luteum was flushed with 10 ml phosphate-buffered saline and the conceptus, and uterine luminal …

A 100-Year Review: Yogurt And Other Cultured Dairy Products, Kayanush J. Aryana, Douglas W. Olson

Faculty Publications

The history of the last 100 years of the science and technology of yogurt, sour cream, cultured butter, cultured buttermilk, kefir, and acidophilus milk has been one of continuous development and improvement. Yogurt leads the cultured dairy product category in terms of volume of production in the United States and recent research activity. Legal definitions of yogurt, sour cream and acidified sour cream, and cultured milk, including cultured buttermilk, are presented in the United States Code of Federal Regulations and summarized here. A tremendous amount of research has been done on traditional and novel ingredients, starter cultures and probiotics, mix …

Quantity And Quality Limit Detritivore Growth: Mechanisms Revealed By Ecological Stoichiometry And Co-Limitation Theory, Halvor M. Halvorson, Erik Sperfeld, Michelle A. Evans-White

Faculty Publications

Resource quantity and quality are fundamental bottom-up constraints on consumers. Best understood in autotroph-based systems, co-occurrence of these constraints may be common but remains poorly studied in detrital-based systems. Here, we used a laboratory growth experiment to test limitation of the detritivorous caddisfly larvae Pycnopsyche lepida across a concurrent gradient of oak litter quantity (food supply) and quality (phosphorus : carbon [P:C ratios]). Growth increased simultaneously with quantity and quality, indicating co-limitation across the resource gradients. We merged approaches of ecological stoichiometry and co-limitation theory, showing how co-limitation reflected shifts in C and P acquisition throughout homeostatic regulation. Increased growth …

"I Was Not Ready To Die Yet": William Stowell's Utah War Ordeal, Kenneth L. Alford Ph.D., R. Devan Jensen

Faculty Publications

In the fall of 1857, young wives Cynthia Jane Stowell and Sophronia Stowell bade fare­well to their husband, William R. R. Stowell, a lieutenant in the Utah militia working to hinder the US Army from entering Utah Territory. That winter they received word that William had been captured and was being held prisoner at Camp Scott, in present-day Wyoming. The Utah War arose from a complex web of causes and motivations: federal and Utah territorial authorities often clashed regarding Mormon authority and influence in the territorial court sys­tem, the mail service, policies regarding American-Indian relations, polygamy, and the moral character …

Trading Off Sound Pressure Level And Average Power Production For Wind Farm Layout Optimization, Eric Tingey, Andrew Ning

Faculty Publications

This research explores the trade-offs between a wind farm’s average power production and noise impact on nearby observers. Two specific wind farm designs were studied and optimized using the FLORIS wake model and an acoustic model based on semi-empirical turbine noise calculations. It was found in the two wind farms that the average power production could be increased, up to 8.01% in one and 3.63% in the other, ignoring sound level considerations. Including a noise restriction in the optimization had a minimal impact on the optimal average power production within about a five-decibel range. Past this range, sound limitations decreased …

John E. Davis (William H. Norman) -- A Galvanized Yankee In Utah, Kenneth L. Alford Ph.D.

Faculty Publications

An interesting and intriguing story about William H. Norman, who served in the Confederate Army during the American Civil War as an infantry rifleman from Georgia, was captured by Union troops in December 1864 outside of Nashville, Tennessee, and was then incarcerated as a prisoner-of-war in Camp Douglas, Illinois. As a Confederate prisoner, the federal government gave him the option of remaining in the camp or renouncing his Confederate loyalty and enlisting in the Union Army. Like thousands of his fellow prisoners, he chose the second option and became a "galvanized Yankee." A few months later (after the end of …

Iron Retention In Iron-Fortified Rice And Use Of Iron-Fortified Rice To Treat Women With Iron Deficiency: A Pilot Study, J. N. Losso, N. Karki, J. Muyonga, Y. Wu, K. Fusilier, G. Jacob, Y. Yu, J. C. Rood, J. W. Finley, F. L. Greenway

Faculty Publications

Objectives 1. Evaluate the effect of washing and cooking iron-fortified rice on iron retention and bioavailability. 2. Evaluate the effect of iron-fortified rice on women with iron deficiency anemia Methods 1. Iron-fortified rice (18 mg/100 g as FeSO4) was cooked in Baton Rouge, Louisiana (C), rinsed and cooked (RC), fried and cooked (FC), cooked with extra water (CW), or soaked and cooked with extra water (SCW), and iron retention was determined. 2. Rice samples were cooked in Kampala, Uganda in a lab (C-Uganda) and households using traditional cooking method (TC-Uganda) and iron retention were determined. 3. Seventeen women with iron …

Beyond “Obtaining An Fba”: The Logic And Utility Of Addressing Function When Attending To Problem Behavior, Paul Mooney, Joseph B. Ryan

Faculty Publications

No abstract provided.

Colorful Seashells: Identification Of Haem Pathway Genes Associated With The Synthesis Of Porphyrin Shell Color In Marine Snails, Suzanne T. Williams, Anne E. Lockyer, Patricia Dyal, Tomoyuki Nakano, Celia K. C. Churchill, Daniel Isaac Speiser

Faculty Publications

Very little is known about the evolution of molluskan shell pigments, although Mollusca is a highly diverse, species rich, and ecologically important group of animals comprised of many brightly colored taxa. The marine snail genus Clanculus was chosen as an exceptional model for studying the evolution of shell color, first, because in Clanculus margaritarius and Clanculus pharaonius both shell and foot share similar colors and patterns; and second, because recent studies have identified the pigments, trochopuniceus (pink-red), and trochoxouthos (yellow-brown), both comprised of uroporphyrin I and uroporphyrin III, in both shell and colored foot tissue of these species. These unusual …

One Good Plaintiff Is Not Enough, Aaron-Andrew P. Bruhl

Faculty Publications

This Article concerns an aspect of Article III standing that has played a role in many of the highest-profile controversies of recent years, including litigation over the Affordable Care Act, immigration policy, and climate change. Although the federal courts constantly emphasize the importance of ensuring that only proper plaintiffs invoke the federal judicial power, the Supreme Court and other federal courts have developed a significant exception to the usual requirement of standing. This exception holds that a court entertaining a multiple-plaintiff case may dispense with inquiring into the standing of each plaintiff as long as the court finds that one …

Relational Struggles And Experiential Immediacy In Religious American Families, David C. Dollahite, Loren D. Marks, Kaity Pearl Young

Faculty Publications

Qualitative family scholar Kerry Daly has called for more theory addressing understudied dimensions including religion, everyday experiences, and time. Herein we address all three of these dimensions as we empirically examine and theorize Ono relational struggles among religious families. We also explore what we term experiential immediacy–defined as the personal and temporal proximity to participant-reported lived experience. Based on qualitative analyses of in-depth interviews with 198 highly religious families (N = 476 individuals), we identified four types of relational struggles created by religious involvement: burdens, disunities, abuses, and offenses. We also offer a conceptual framework of experiential immediacy grounded …

Attractiveness As A Function Of Skin Tone And Facial Features: Evidence From Categorization Studies, Elena V. Stepanova, Michael J. Strube

Faculty Publications

Participants rated the attractiveness and racial typicality of male faces varying in their facial features from Afrocentric to Eurocentric and in skin tone from dark to light in two experiments. Experiment 1 provided evidence that facial features and skin tone have an interactive effect on perceptions of attractiveness and mixed-race faces are perceived as more attractive than single-race faces. Experiment 2 further confirmed that faces with medium levels of skin tone and facial features are perceived as more attractive than faces with extreme levels of these factors. Black phenotypes (combinations of dark skin tone and Afrocentric facial features) were rated …

Supporting Individuals With Autism Spectrum Disorder In Understanding And Coping With Complex Social Emotional Issues, Kaitlyn P. Ahlers, Terisa P. Gabrielsen, Danielle Lewis, Anna M. Brady, April Litchford

Faculty Publications

Core deficits in autism spectrum disorder (ASD) center around social communication and behavior. For those with ASD, these deficits complicate the task of learning how to cope with and manage complex social emotional issues. Although individuals with ASD may receive sufficient academic and basic behavioral support in school settings, supports for dealing with complex social emotional issues are more difficult to access, even though these issues significantly impact student learning. When addressing these challenging social- and emotional-based issues, school and professional personnel need more specific instructional skill sets and resources to effectively and compassionately support students with ASD. In this …

Examining The Relationship Between Park Neighborhoods, Features, Cleanliness, And Condition With Observed Weekday Park Usage And Physical Activity: A Case Study, Kerry Hamilton, Andrew T. Kaczynski, Melissa L. Fair, Lucie Levesque

Faculty Publications

Background. Little research has comprehensively explored how park features, quality indicators, and neighborhood environments are associated with observed park usage and physical activity (PA). This case study examined whether weekday park usage and PA differ by neighborhood type, across numerous categories of park features, and according to park feature condition and cleanliness. Methods. Direct observation was used to capture the number of users and PA levels within 143 park features in 6 parks (3 urban, 3 suburban) over the course of six weeks. Audits of park environments assessed the type, condition, and cleanliness of all features and amenities. …

A Communal Catalogue Reveals Earth's Multiscale Microbial Diversity, Luke R. Thompson, Jon G. Sanders, Daniel Mcdonald, Amnon Amir, Joshua Ladau, Kenneth J. Locey, Robert J. Prill, Anupriya Tripathi, Sean M. Gibbons, Gail Ackermann, Jose A. Navas-Molina, Stefan Janssen, Evguenia Kopylova, Yoshiki Vázquez-Baeza, Antonio González, James T. Morton, Siavash Mirarab, Zhenjiang Zech Xu, Lingjing Jiang, Mohamed F. Haroon, Jad Kanbar, Qiyun Zhu, Se Jin Song, Tomasz Kosciolek, Nicholas A. Bokulich, Joshua Lefler, Colin J. Brislawn, Gregory Humphrey, Sarah M. Owens, Jarrad Hampton-Marcell, Donna Berg-Lyons, Valerie Mckenzie, Noah Fierer

Faculty Publications

© 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. Our growing awareness of the microbial world's importance and diversity contrasts starkly with our limited understanding of its fundamental structure. Despite recent advances in DNA sequencing, a lack of standardized protocols and common analytical frameworks impedes comparisons among studies, hindering the development of global inferences about microbial life on Earth. Here we present a meta-analysis of microbial community samples collected by hundreds of researchers for the Earth Microbiome Project. Coordinated protocols and new analytical methods, particularly the use of exact sequences instead of clustered operational taxonomic units, enable …

Msaabcr Operon Is Involved In Persister Cell Formation In Staphylococcus Aureus, Gyan S. Sahukhal, Shanti Pandey, Mohamed O. Elasri

Faculty Publications

Background

Persister cells comprise a phenotypic variant that shows extreme antibiotic tolerance resulting in treatment failures of bacterial infections. While this phenomenon has posed a great threat in public health, mechanisms underlying their formation in Staphylococcus aureus remain largely unknown. Increasing evidences of the presence of persister cells in recalcitrant infections underscores the great urgency to unravel the mechanism by which these cells develop. Previously, we characterized msaABCR operon that plays roles in regulation of virulence, biofilm development and antibiotic resistance. We also characterized the function of MsaB protein and showed that MsaB is a putative transcription factor that binds …

Inspiring Change, Kerstin Mcpherson, Hayley Randle, Rachel Roberts, Sharon Schoenmaker, Kim M. Thompson, Skye Wassens

Faculty Publications

No abstract provided.

The Association Between Gastro-Oesophageal Reflux Disease And Subsequent Rheumatoid Arthritis Occurrence: A Nested Case–Control Study From Taiwan, Herng-Ching Lin, Sudha Xirasagar, Cha-Ze Lee, Chung-Chien Huang, Chao-Hung Chen

Faculty Publications

Objective Gastro-oesophageal reflux disease (GORD) is a common comorbidity among patients with rheumatoid arthritis (RA). While GORD has been attributed to the antirheumatic medications, no studies of human cohorts have investigated a link between GORD and RA. This study investigates whether GORD is associated with a subsequent RA diagnosis over a 5-year follow-up using a population-based dataset.

Setting Taiwan

Participants We used data from the Taiwan Longitudinal Health Insurance Database. The study group consisted of 13 645 patients with an ambulatory claim showing a GORD diagnosis. We used propensity score matching to select 13 645 comparison patients (one per study …

Commercial Sexual Exploitation Of Youth In The United States: A Qualitative Systematic Review, Michelle Hampton, Michelle Lieggi

Faculty Publications

Background:Homeless, runaway, and transgender youth are at high risk for commercial sexual exploitation in the United States. Research examining this phenomenon is growing but requires synthesis to facilitate its use by professionals who serve this population. The purpose of this review was to aggregate the qualitative evidence regarding commercially sexually exploited youth (CSEY) in the United States.Methods:The search included published and unpublished qualitative studies with current or former CSEY who reside in the United States.Results:There were 19 studies included in the review with a total of 795 participants. Eight themes were identified and grouped into three broader categories: experiences that …

Multiple Species Of Cuckoos Are Superior Predictors Of Bird Species Richness In Asia, Anders Pape Møller, Federico Morelli, Yanina Benedetti, Timothy Mousseau, Tongping Su, Bo Zhou, Piotr Tryjanowski, Wei Liang

Faculty Publications

The abundance and the presence of common cuckoos Cuculus canorus have been shown to predict species richness of birds across Europe, while there are no such analyses available for other continents where species richness of parasitic cuckoos is larger. Here, we tested whether species richness of birds increased with the number of cuckoo species in two study areas in China and one in Japan. We also tested whether species richness of birds can be predicted by the number of cuckoo individuals. Furthermore, we compared the strength of association between overall bird species richness and species richness of cuckoos, Paridae, Corvidae, …

Organizational Learning In A College Of Nursing: A Learning History, Bret Lyman, Lisa A. Cowan, Hannah C. Hoyt

Faculty Publications

Background: College of nursing leaders can foster organizational learning as a means of achieving their desired organizational outcomes. Organizational learning has not previously been studied in colleges of nursing, leaving college administrators and faculty little guidance as they strive to improve outcomes in their own colleges.

Objectives: The purpose of this study was to discover new insights related to organizational learning in a college of nursing.

Design: The learning history method was used to document and describe organizational learning in a college of nursing.

Setting: This study was conducted with a college of nursing situated in a private, religious-based university …

An Undergraduate Laboratory Manual For Analyzing A Crispr Mutant With A Predicted Role In Regeneration, Susan Walsh, Ashley Becker, Paxton S. Sickler, Damian G. Clarke, Erin Jimenez

Faculty Publications

Exposing students to undergraduate research has reportedly improved students’ development of knowledge and skills in the laboratory, self-efficacy, satisfaction with their research, retention, and perseverance when faced with obstacles. Furthermore, utilizing authentic course-based undergraduate research experiences (CUREs) includes all students enrolled in the class, giving those who may not otherwise have access to an independent undergraduate research project an opportunity to engage in the scientific process in context of an original, unanswered question. In the fall of 2016, second semester introductory biology students conducted a semester-long research project on the transcription factor Lin28a to determine the effect of Lin28a on …