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Environmental Gradients And The Evolution Of Successional Habitat Specialization: A Test Case With 14 Neotropical Forest Sites, Susan G. Letcher, Jesse R. Lasky, Robin L. Chazdon, Natalia Norden, S. Joseph Wright, Jorge A. Meave, Eduardo A. Pérez-García, Rodrigo Muñoz, Eunice Romero-Pérez, Ana Andrade, José Luis Andrade, Patricia Balvanera, Justin M. Becknell, Tony V. Bentos, Radika Bhaskar, Frans Bongers, Vanessa Boukili, Pedro H.S. Brancalion, Ricardo G. César, Deborah A. Clark, David B. Clark, Dylan Craven, Alexander Defrancesco, Juan M. Dupuy, Bryan Finegan, Eugenio González-Jiménez, Jefferson S. Hall, Kyle E. Harms, José Luis Hernández-Stefanoni, Peter Hietz, Deborah Kennard, Timothy J. Killeen, Susan G. Laurance Sep 2015

Environmental Gradients And The Evolution Of Successional Habitat Specialization: A Test Case With 14 Neotropical Forest Sites, Susan G. Letcher, Jesse R. Lasky, Robin L. Chazdon, Natalia Norden, S. Joseph Wright, Jorge A. Meave, Eduardo A. Pérez-García, Rodrigo Muñoz, Eunice Romero-Pérez, Ana Andrade, José Luis Andrade, Patricia Balvanera, Justin M. Becknell, Tony V. Bentos, Radika Bhaskar, Frans Bongers, Vanessa Boukili, Pedro H.S. Brancalion, Ricardo G. César, Deborah A. Clark, David B. Clark, Dylan Craven, Alexander Defrancesco, Juan M. Dupuy, Bryan Finegan, Eugenio González-Jiménez, Jefferson S. Hall, Kyle E. Harms, José Luis Hernández-Stefanoni, Peter Hietz, Deborah Kennard, Timothy J. Killeen, Susan G. Laurance

Faculty Publications

© 2015 British Ecological Society. Successional gradients are ubiquitous in nature, yet few studies have systematically examined the evolutionary origins of taxa that specialize at different successional stages. Here we quantify successional habitat specialization in Neotropical forest trees and evaluate its evolutionary lability along a precipitation gradient. Theoretically, successional habitat specialization should be more evolutionarily conserved in wet forests than in dry forests due to more extreme microenvironmental differentiation between early and late-successional stages in wet forest. We applied a robust multinomial classification model to samples of primary and secondary forest trees from 14 Neotropical lowland forest sites spanning a …


Developmental Changes In Hypoxic Exposure And Responses To Anoxia In Drosophila Melanogaster, Viviane Callier, Steven C. Hand, Jacob B. Campbell, Taylor Biddulph, Jon F. Harrison Sep 2015

Developmental Changes In Hypoxic Exposure And Responses To Anoxia In Drosophila Melanogaster, Viviane Callier, Steven C. Hand, Jacob B. Campbell, Taylor Biddulph, Jon F. Harrison

Faculty Publications

© 2015. Published by The Company of Biologists Ltd. Holometabolous insects undergo dramatic morphological and physiological changes during ontogeny. In particular, the larvae of many holometabolous insects are specialized to feed in soil, water or dung, inside plant structures, or inside other organisms as parasites where they may commonly experience hypoxia or anoxia. In contrast, holometabolous adults usually are winged and live with access to air. Here, we show that larval Drosophila melanogaster experience severe hypoxia in their normal laboratory environments; third instar larvae feed by tunneling into a medium without usable oxygen. Larvae move strongly in anoxia for many …


Nonparametric Estimation Of Interspecific Spatio-Temporal Niche Separation Between Two Lady Beetles (Coleoptera: Coccinellidae) In Bt Cotton Fields, Zeng Bin Lu, Pei Jian Shi, Gadi V.P. Reddy, Lin Mao Li, Xing Yuan Men, Feng Ge Sep 2015

Nonparametric Estimation Of Interspecific Spatio-Temporal Niche Separation Between Two Lady Beetles (Coleoptera: Coccinellidae) In Bt Cotton Fields, Zeng Bin Lu, Pei Jian Shi, Gadi V.P. Reddy, Lin Mao Li, Xing Yuan Men, Feng Ge

Faculty Publications

Predaceous lady beetles are important natural enemies of many insect pests in agro-ecosystem. The altered agricultural practices associated with widespread adoption of Bt cotton may have potential effects on the spatio-temporal patterns of predaceous lady beetles, as the composition and abundance of nontarget sucking pests have been changed in Bt cotton fields. In the current study, the spatio-temporal patterns of two important lady beetles, Harmonia axyridis (Pallas) (Coleoptera: Coccinellidae) and Propylea japonica (Thunberg) (Coleoptera: Coccinellidae), were surveyed in Bt cotton fields. A nonparametric method associated with Monte Carlo tests was used to address and test whether niche segregation occurred between …


Production Of Inbred Larvae Through Self-Fertilization Using Oocytes And Cryopreserved Sperm From The Same Individuals After Sex Reversal In Eastern Oyster Crassostrea Virginica, Huiping Yang, Yan Wang, Ximing Guo, Terrence R. Tiersch Sep 2015

Production Of Inbred Larvae Through Self-Fertilization Using Oocytes And Cryopreserved Sperm From The Same Individuals After Sex Reversal In Eastern Oyster Crassostrea Virginica, Huiping Yang, Yan Wang, Ximing Guo, Terrence R. Tiersch

Faculty Publications

The eastern oyster Crassostrea virginica can change sex which makes self-fertilization possible if sperm can be cryopreserved. In this study, small (~1 year old) and large (~2-3 years old) oysters were biopsied for sperm collection. Survival of the biopsied oysters after 1 year was 50% for small oysters and 17% for large oysters. Oocytes were collected from sex-reversed females, and self-fertilized with cryopreserved sperm. Of the 24 cryopreserved samples, 14 individuals had ≤1% fertility when crossed with oocytes from unrelated females, indicating that the cryopreserved sperm had reduced fertility. The other 10 individuals had a fertility of 39 ± 25% …


The Challenges Of Resolving A Rapid, Recent Radiation: Empirical And Simulated Phylogenomics Of Philippine Shrews, Thomas C. Giarla, Jacob A. Esselstyn Sep 2015

The Challenges Of Resolving A Rapid, Recent Radiation: Empirical And Simulated Phylogenomics Of Philippine Shrews, Thomas C. Giarla, Jacob A. Esselstyn

Faculty Publications

Phylogenetic relationships in recent, rapid radiations can be difficult to resolve due to incomplete lineage sorting and reliance on genetic markers that evolve slowly relative to the rate of speciation. By incorporating hundreds to thousands of unlinked loci, phylogenomic analyses have the potential to mitigate these difficulties. Here, we attempt to resolve phylogenetic relationships among eight shrew species (genus Crocidura) from the Philippines, a phylogenetic problem that has proven intractable with small (< 10 loci) data sets. We sequenced hundreds of ultraconserved elements and whole mitochondrial genomes in these species and estimated phylogenies using concatenation, summary coalescent, and hierarchical coalescent methods. The concatenated approach recovered a maximally supported and fully resolved tree. In contrast, the coalescent-based approaches produced similar topologies, but each had several poorly supported nodes. Using simulations, we demonstrate that the concatenated tree could be positively misleading. Our simulations also show that the tree shape we tend to infer, which involves a series of short internal branches, is difficult to resolve, even if substitution models are known and multiple individuals per species are sampled. As such, the low support we obtained for backbone relationships in our coalescent-based inferences reflects a real and appropriate lack of certainty. Our results illuminate the challenges of estimating a bifurcating tree in a rapid and recent radiation, providing a rare empirical example of a nearly simultaneous series of speciation events in a terrestrial animal lineage as it spreads across an oceanic archipelago.


Testosterone Might Not Be Necessary To Support Female Aggression In Incubating Northern Cardinals, M. Susan Devries, Caitlin P. Winters, Jodie M. Jawor Sep 2015

Testosterone Might Not Be Necessary To Support Female Aggression In Incubating Northern Cardinals, M. Susan Devries, Caitlin P. Winters, Jodie M. Jawor

Faculty Publications

Testosterone's (T) influence on male aggression has been well established in many vertebrate species, but the impact of T on female aggressive behaviour is poorly understood. Among birds, a link between T and female aggression is plausible, as females of many species exhibit a seasonal peak in T concentrations at the onset of breeding when social instability is greatest and they may have circulating T through much of the breeding season. However, investigations examining the relationship between T and female aggression are few and have yielded conflicting results, with experimentally or endogenously elevated T supporting aggressive behaviour in females of …


Genetic Divergence Of An Avian Endemic On The Californian Channel Islands, Amy G. Wilson, Yvonne Chan, Sabrina S. Taylor, Peter Arcese Aug 2015

Genetic Divergence Of An Avian Endemic On The Californian Channel Islands, Amy G. Wilson, Yvonne Chan, Sabrina S. Taylor, Peter Arcese

Faculty Publications

The Californian Channel Islands are near-shore islands with high levels of endemism, but extensive habitat loss has contributed to the decline or extinction of several endemic taxa. A key parameter for understanding patterns of endemism and demography in island populations is the magnitude of inter-island dispersal. This paper estimates the extent of migration and genetic differentiation in three extant and two extinct populations of Channel Island song sparrows (Melospiza melodia graminea). Inter-island differentiation was substantial (G''ST: 0.14-0.37), with San Miguel Island having the highest genetic divergence and lowest migration rates. Santa Rosa and Santa Cruz Island populations were less diverged …


Molecular Approaches For Improving Desiccation Tolerance: Insights From The Brine Shrimp Artemia Franciscana, Steven C. Hand, Michael A. Menze Aug 2015

Molecular Approaches For Improving Desiccation Tolerance: Insights From The Brine Shrimp Artemia Franciscana, Steven C. Hand, Michael A. Menze

Faculty Publications

© 2015, Springer-Verlag Berlin Heidelberg. Main conclusion: We have evaluated the endogenous expression and molecular properties of selected Group 3 LEA proteins fromArtemia franciscana, and the capacity of selected Groups 1 and 3 proteins transfected into various desiccation-sensitive cell lines to improve tolerance to drying. Organisms inhabiting both aquatic and terrestrial ecosystems frequently are confronted with the problem of water loss for multiple reasons—exposure to hypersalinity, evaporative water loss, and restriction of intracellular water due to freezing of extracellular fluids. Seasonal desiccation can become severe and lead to the production of tolerant propagules and entry into the state of anhydrobiosis …


Younger And Older Coastal Fishers Face Catastrophic Loss After Hurricane Katrina, Katie E. Cherry, Loren D. Marks, Rachel Adamek, Bethany A. Lyon Aug 2015

Younger And Older Coastal Fishers Face Catastrophic Loss After Hurricane Katrina, Katie E. Cherry, Loren D. Marks, Rachel Adamek, Bethany A. Lyon

Faculty Publications

Hurricanes are associated with environmental destruction and traumatic stress for directly affected communities. In this chapter, we compare and contrast younger and older commercial fishers from two south Louisiana coastal parishes (counties) who experienced profound losses in the 2005 Hurricanes Katrina and Rita. Content analysis of narrative data based on open-ended interview questions yielded three core themes: (1) Materialism and True Colors Revealed: Despicable Deeds and Acts of Grace after the Storm, (2) Helping Efforts Across Denominations: God was Using his People to help His [Other] People, and (3) Historical Ties that Bind: Old Roots and New Connections. Themes 1 …


Co-Extinction In A Host-Parasite Network: Identifying Key Hosts For Network Stability, Tad Dallas, Emily Cornelius Aug 2015

Co-Extinction In A Host-Parasite Network: Identifying Key Hosts For Network Stability, Tad Dallas, Emily Cornelius

Faculty Publications

Parasites comprise a substantial portion of total biodiversity. Ultimately, this means that host extinction could result in many secondary extinctions of obligate parasites and potentially alter host-parasite network structure. Here, we examined a highly resolved fish-parasite network to determine key hosts responsible for maintaining parasite diversity and network structure (quantified here as nestedness and modularity). We evaluated four possible host extinction orders and compared the resulting co-extinction dynamics to random extinction simulations; including host removal based on estimated extinction risk, parasite species richness and host level contributions to nestedness and modularity. We found that all extinction orders, except the one …


Co-Extinction In A Host-Parasite Network: Identifying Key Hosts For Network Stability, Tad Dallas, Emily Cornelius Aug 2015

Co-Extinction In A Host-Parasite Network: Identifying Key Hosts For Network Stability, Tad Dallas, Emily Cornelius

Faculty Publications

Parasites comprise a substantial portion of total biodiversity. Ultimately, this means that host extinction could result in many secondary extinctions of obligate parasites and potentially alter hostparasite network structure. Here, we examined a highly resolved fish-parasite network to determine key hosts responsible for maintaining parasite diversity and network structure (quantified here as nestedness and modularity). We evaluated four possible host extinction orders and compared the resulting co-extinction dynamics to random extinction simulations; including host removal based on estimated extinction risk, parasite species richness and host level contributions to nestedness and modularity. We found that all extinction orders, except the one …


Looking For The Silver Lining: Benefit Finding After Hurricanes Katrina And Rita In Middle-Aged, Older, And Oldest-Old Adults, Katie E. Stanko, Katie E. Cherry, Kyle S. Ryker, Farra Mughal, Loren D. Marks, Jennifer Silva Brown, Patricia F. Gendusa, Marisa C. Sullivan, John Bruner, David A. Welsh, L. Joseph Su, S. Michael Jazwinski Aug 2015

Looking For The Silver Lining: Benefit Finding After Hurricanes Katrina And Rita In Middle-Aged, Older, And Oldest-Old Adults, Katie E. Stanko, Katie E. Cherry, Kyle S. Ryker, Farra Mughal, Loren D. Marks, Jennifer Silva Brown, Patricia F. Gendusa, Marisa C. Sullivan, John Bruner, David A. Welsh, L. Joseph Su, S. Michael Jazwinski

Faculty Publications

Looking for potentially positive outcomes is one way that people cope with stressful events. In two studies, we examined perceived “silver linings” after the 2005 Hurricanes Katrina and Rita among indirectly affected adults. In Study 1, middle-aged (ages 47–64 years), older (ages 65–89 years), and oldest-old (ages 90–95 years) adults in the Louisiana Healthy Aging Study (LHAS) responded to an open-ended question on perceived silver linings in a longitudinal assessment carried out during the immediate impact (1 to 4 months after landfall) and post-disaster recovery phase (6 to 14 months post-storm). Qualitative grounded theory methods were employed to analyze these …


Food Insecurity Reported By Children, But Not By Mothers, Is Associated With Lower Quality Of Diet And Shifts In Foods Consumed, Jennifer Bernal, Edward A. Frongillo Jr., Juan A. Rivera Aug 2015

Food Insecurity Reported By Children, But Not By Mothers, Is Associated With Lower Quality Of Diet And Shifts In Foods Consumed, Jennifer Bernal, Edward A. Frongillo Jr., Juan A. Rivera

Faculty Publications

Household food security shows little indication of nutrient inadequacy among children, according to reports made by parents. We examined the associations of food insecurity as reported by children and mothers with children’s consumption of energy, macronutrients such as vitamin A, calcium, iron and zinc, and selected foods, and whether these associations differed by child’s gender. This cross-sectional study had non-probabilistic 128 Venezuelan mother–child pairs. We assessed food insecurity and management strategies in children using 10- and nine-item instruments, respectively. Mothers’ report of food insecurity came from a previously validated 12-item instrument. Nutrient intake of children was assessed with a 67-item …


Investigation Of Stilbenoids As Potential Therapeutic Agents For Rotavirus Gastroenteritis, Judith M. Ball, Fabricio Medina-Bolivar, Katelyn D. Defrates, Emily Hambleton, Megan E. Hurlburt, Lingling Fang, Tianhong Yang, Luis Nopo-Olazabal, Richard L. Atwill, Pooj Ghai, Rebecca D. Parr Aug 2015

Investigation Of Stilbenoids As Potential Therapeutic Agents For Rotavirus Gastroenteritis, Judith M. Ball, Fabricio Medina-Bolivar, Katelyn D. Defrates, Emily Hambleton, Megan E. Hurlburt, Lingling Fang, Tianhong Yang, Luis Nopo-Olazabal, Richard L. Atwill, Pooj Ghai, Rebecca D. Parr

Faculty Publications

Rotavirus (RV) infections cause severe diarrhea in infants and young children worldwide. Vaccines are available but cost prohibitive for many countries and only reduce severe symptoms. Vaccinated infants continue to shed infectious particles, and studies show decreased efficacy of the RV vaccines in tropical and subtropical countries where they are needed most. Continuing surveillance for new RV strains, assessment of vaccine efficacy, and development of cost effective antiviral drugs remain an important aspect of RV studies. This study was to determine the efficacy of antioxidant and anti-inflammatory stilbenoids to inhibit RV replication. Peanut (A. hypogaea) hairy root cultures were induced …


How Diverse Detrital Environments Influence Nutrient Stoichiometry Between Males And Females Of The Co-Occurring Container Mosquitoes Aedes Albopictus, Ae. Aegypti, And Culex Quinquefasciatus, Donald A. Yee, Michael G. Kaufman, Nnaemeka F. Ezeakacha Aug 2015

How Diverse Detrital Environments Influence Nutrient Stoichiometry Between Males And Females Of The Co-Occurring Container Mosquitoes Aedes Albopictus, Ae. Aegypti, And Culex Quinquefasciatus, Donald A. Yee, Michael G. Kaufman, Nnaemeka F. Ezeakacha

Faculty Publications

Allocation patterns of carbon and nitrogen in animals are influenced by food quality and quantity, as well as by inherent metabolic and physiological constraints within organisms. Whole body stoichiometry also may vary between the sexes who differ in development rates and reproductive allocation patterns. In aquatic containers, such as tree holes and tires, detrital inputs, which vary in amounts of carbon and nitrogen, form the basis of the mosquito-dominated food web. Differences in development times and mass between male and female mosquitoes may be the result of different reproductive constraints, which could also influence patterns of nutrient allocation. We examined …


Altered Structure And Function Of Astrocytes Following Status Epilepticus., Wilcox Ks, Gee Jm, Gibbons Mb, Tvrdik P, White Ja Aug 2015

Altered Structure And Function Of Astrocytes Following Status Epilepticus., Wilcox Ks, Gee Jm, Gibbons Mb, Tvrdik P, White Ja

Faculty Publications

No abstract provided.


Genotype-By-Sequencing Of The Plant-Pathogenic Fungi Pyrenophora Teres And Sphaerulina Musiva Utilizing Ion Torrent Sequence Technology, Jared M. Leboldus, Kasia Kinzer, Jonathan Richards, Zhu Ya, Changhui Yan, Timothy L. Friesen, Robert Brueggeman Aug 2015

Genotype-By-Sequencing Of The Plant-Pathogenic Fungi Pyrenophora Teres And Sphaerulina Musiva Utilizing Ion Torrent Sequence Technology, Jared M. Leboldus, Kasia Kinzer, Jonathan Richards, Zhu Ya, Changhui Yan, Timothy L. Friesen, Robert Brueggeman

Faculty Publications

Genetic and genomics tools to characterize host-pathogen interactions are disproportionately directed to the host because of the focus on resistance. However, understanding the genetics of pathogen virulence is equally important and has been limited by the high cost of denovo genotyping of species with limited marker data. Non-resource-prohibitive methods that overcome the limitation of genotyping are now available through genotype-by-sequencing (GBS). The use of a two-enzyme restriction-associated DNA (RAD)-GBS method adapted for Ion Torrent sequencing technology provided robust and reproducible high-density genotyping of several fungal species. A total of 5783 and 2373 unique loci, 'sequence tags', containing 16441 and 9992 …


Point Of No Return From Water Loss In Coptotermes Formosanus (Isoptera: Rhinotermitidae), Bal K. Gautam, Gregg Henderson Aug 2015

Point Of No Return From Water Loss In Coptotermes Formosanus (Isoptera: Rhinotermitidae), Bal K. Gautam, Gregg Henderson

Faculty Publications

Describing desiccation stages based on the physical appearance of termites has not been evaluated previously. Formosan subterranean termites were studied to determine the rate of water loss, singly and in groups, in the laboratory. The stages of water loss are described based on changes in physical appearance and percent total body water loss evaluated at 2- to 8-h time intervals up to 32 h.Workers in groups lost water slower than individual worker trials. Weight loss was linear over time for worker groups and individuals, as was individual soldier only trials. Water loss in individual workers was significantly faster than in …


Infectious Disease And Red Wolf Conservation: Assessment Of Disease Occurrence And Associated Risks, Kristin E. Brzeski, Rebecca B. Harrison, William T. Waddell, Karen N. Wolf, David R. Rabon, Sabrina S. Taylor Aug 2015

Infectious Disease And Red Wolf Conservation: Assessment Of Disease Occurrence And Associated Risks, Kristin E. Brzeski, Rebecca B. Harrison, William T. Waddell, Karen N. Wolf, David R. Rabon, Sabrina S. Taylor

Faculty Publications

Infectious diseases pose a significant threat to global biodiversity and may contribute to extinction. As such, establishing baseline disease prevalence in vulnerable species where disease could affect persistence is important to conservation. We assessed potential disease threats to endangered red wolves (Canis rufus) by evaluating regional (southeastern United States) disease occurrences in mammals and parasite prevalence in red wolves and sympatric coyotes (Canis latrans) in North Carolina. Common viral pathogens in the southeast region, such as canine distemper and canine parvovirus, and numerous widespread endoparasites could pose a threat to the red Wolf population. The most prevalent parasites in red …


Effects Of Feeding Baleage To Beef Calves On Performance, Rumen Fermentation, And Metabolic Response During The Fall Backgrounding Period, R. M. Martin, R. S. Walker, M. T. Kearney, C. C. Williams Aug 2015

Effects Of Feeding Baleage To Beef Calves On Performance, Rumen Fermentation, And Metabolic Response During The Fall Backgrounding Period, R. M. Martin, R. S. Walker, M. T. Kearney, C. C. Williams

Faculty Publications

A total of 180 spring-born beef calves (BW = 217 ± 20.6 kg) were fed bermudagrass (Cynodon dactylon) or rye (Secale cereale) and ryegrass (Lolium multiflorum) baleage to evaluate performance, blood metabolites, rumen fermentation, and forage refusal for 60 d after weaning. Calves were stratified by BW, sex, and breed to 1 of 9 paddocks and fed 1 of 3 diets: 47-d-regrowth bermudagrass hay (BERH), 43-d-regrowth bermudagrass baleage (BERB), or late-bloom ryeryegrass baleage (LRRG). A CP liquid supplement was provided ad libitum for 60 d. Calves were weighed on d -1, 0, 29, 30, 60, and 61 for comparison of …


A Multiple Endpoint Analysis Of The Effects Of Chronic Exposure To Sediment Contaminated With Deepwater Horizon Oil On Juvenile Southern Flounder And Their Associated Microbiomes, Nancy J. Brown-Peterson, Michelle Krasnec, Ryan Takeshita, Caitlin N. Ryan, Kimberly J. Griffitt, Claire Lay, Gregory D. Mayer, Keith M. Bayha, William E. Hawkins, Jeffrey Morris, Robert J. Griffitt Aug 2015

A Multiple Endpoint Analysis Of The Effects Of Chronic Exposure To Sediment Contaminated With Deepwater Horizon Oil On Juvenile Southern Flounder And Their Associated Microbiomes, Nancy J. Brown-Peterson, Michelle Krasnec, Ryan Takeshita, Caitlin N. Ryan, Kimberly J. Griffitt, Claire Lay, Gregory D. Mayer, Keith M. Bayha, William E. Hawkins, Jeffrey Morris, Robert J. Griffitt

Faculty Publications

Exposure to oiled sediments can negatively impact the health of fish species. Here, we examine the effects of chronic exposure of juvenile southern flounder, Paralichthys lethostigma, to a sediment-oil mixture. Oil:sediment mixtures are persistent over time and can become bioavailable following sediment perturbation or resuspension. Juvenile flounder were exposed for 32 days under controlled laboratory conditions to five concentrations of naturally weathered Macondo MC252 oil mixed into uncontaminated, field-collected sediments. The percent composition of individual polycyclic aromatic hydrocarbons (PAHs) of the weathered oil did not change after mixing with the sediment. Spiked exposure sediments contained 0.04–395 mg/kg tPAH50 (sum of …


Configuring Learning Theory To Support Teaching, David Kirshner Jul 2015

Configuring Learning Theory To Support Teaching, David Kirshner

Faculty Publications

No abstract provided.


Big Data: Challenges And Opportunities For Digital Libraries, Richard Hacken Jul 2015

Big Data: Challenges And Opportunities For Digital Libraries, Richard Hacken

Faculty Publications

Presented as a Keynote Address to the International Conference on Computing in Engineering and the Sciences in Istanbul, Turkey, on July 30, 2015.

This is an abstract of the speech:

Thanks to technological progress, thanks to the copious Internet, thanks to geometrically burgeoning social media and to quickly proliferating sensors, the flood of data available to us is surging larger and larger, faster and faster. Paradigms for management and analysis are at the core of data-driven businesses and institutions, fueling the velocity of scientific research and development. The phrase “Big Data” was itself coined by scientists as they manipulated exploding …


Phytochrome Diversity In Green Plants And The Origin Of Canonical Plant Phytochromes, Fay Wei Li, Michael Melkonian, Carl J. Rothfels, Juan Carlos Villarreal, Dennis W. Stevenson, Sean W. Graham, Gane Ka Shu Wong, Kathleen M. Pryer, Sarah Mathews Jul 2015

Phytochrome Diversity In Green Plants And The Origin Of Canonical Plant Phytochromes, Fay Wei Li, Michael Melkonian, Carl J. Rothfels, Juan Carlos Villarreal, Dennis W. Stevenson, Sean W. Graham, Gane Ka Shu Wong, Kathleen M. Pryer, Sarah Mathews

Faculty Publications

© 2015 Macmillan Publishers Limited. All rights reserved. Phytochromes are red/far-red photoreceptors that play essential roles in diverse plant morphogenetic and physiological responses to light. Despite their functional significance, phytochrome diversity and evolution across photosynthetic eukaryotes remain poorly understood. Using newly available transcriptomic and genomic data we show that canonical plant phytochromes originated in a common ancestor of streptophytes (charophyte algae and land plants). Phytochromes in charophyte algae are structurally diverse, including canonical and non-canonical forms, whereas in land plants, phytochrome structure is highly conserved. Liverworts, hornworts and Selaginella apparently possess a single phytochrome, whereas independent gene duplications occurred within …


Urban Evolution: The Role Of Water, Sujay S. Kaushal, William H. Mcdowell, Wilfred M. Wollheim, Tamara A. Newcomer Johnson, Paul M. Mayer, Kenneth T. Belt, Michael J. Pennino Jul 2015

Urban Evolution: The Role Of Water, Sujay S. Kaushal, William H. Mcdowell, Wilfred M. Wollheim, Tamara A. Newcomer Johnson, Paul M. Mayer, Kenneth T. Belt, Michael J. Pennino

Faculty Publications

The structure, function, and services of urban ecosystems evolve over time scales from seconds to centuries as Earth’s population grows, infrastructure ages, and sociopolitical values alter them. In order to systematically study changes over time, the concept of “urban evolution” was proposed. It allows urban planning, management, and restoration to move beyond reactive management to predictive management based on past observations of consistent patterns. Here, we define and review a glossary of core concepts for studying urban evolution, which includes the mechanisms of urban selective pressure and urban adaptation. Urban selective pressure is an environmental or societal driver contributing to …


Directional Dominance On Stature And Cognition In Diverse Human Populations, Peter K. Joshi, Tonu Esko, Hannele Mattsson, Niina Eklund, Ilaria Gandin, Teresa Nutile, Anne U. Jackson, Claudia Schurmann, Albert V. Smith, Weihua Zhang, Yukinori Okada, Alena Stančáková, Jessica D. Faul, Wei Zhao, Traci M. Bartz, Maria Pina Concas, Nora Franceschini, Stefan Enroth, Veronique Vitart, Stella Trompet, Xiuqing Guo, Daniel I. Chasman, Jeffrey R. O'Connel, Tanguy Corre, Suraj S. Nongmaithem, Yuning Chen, Massimo Mangino, Daniela Ruggiero, Michela Traglia, Aliki Eleni Farmaki, Tim Kacprowski, Andrew Bjonnes, Ashley Van Der Spek Jul 2015

Directional Dominance On Stature And Cognition In Diverse Human Populations, Peter K. Joshi, Tonu Esko, Hannele Mattsson, Niina Eklund, Ilaria Gandin, Teresa Nutile, Anne U. Jackson, Claudia Schurmann, Albert V. Smith, Weihua Zhang, Yukinori Okada, Alena Stančáková, Jessica D. Faul, Wei Zhao, Traci M. Bartz, Maria Pina Concas, Nora Franceschini, Stefan Enroth, Veronique Vitart, Stella Trompet, Xiuqing Guo, Daniel I. Chasman, Jeffrey R. O'Connel, Tanguy Corre, Suraj S. Nongmaithem, Yuning Chen, Massimo Mangino, Daniela Ruggiero, Michela Traglia, Aliki Eleni Farmaki, Tim Kacprowski, Andrew Bjonnes, Ashley Van Der Spek

Faculty Publications

Homozygosity has long been associated with rare, often devastating, Mendelian disorders, and Darwin was one of the first to recognize that inbreeding reduces evolutionary fitness. However, the effect of the more distant parental relatedness that is common in modern human populations is less well understood. Genomic data now allow us to investigate the effects of homozygosity on traits of public health importance by observing contiguous homozygous segments (runs of homozygosity), which are inferred to be homozygous along their complete length. Given the low levels of genome-wide homozygosity prevalent in most human populations, information is required on very large numbers of …


Exposure To Deepwater Horizon Crude Oil Burnoff Particulate Matter Induces Pulmonary Inflammation And Alters Adaptive Immune Response, Sridhar Jaligama, Zaili Chen, Jordy Saravia, Nikki Yadav, Slawomir M. Lomnicki, Tammy R. Dugas, Stephania A. Cormier Jul 2015

Exposure To Deepwater Horizon Crude Oil Burnoff Particulate Matter Induces Pulmonary Inflammation And Alters Adaptive Immune Response, Sridhar Jaligama, Zaili Chen, Jordy Saravia, Nikki Yadav, Slawomir M. Lomnicki, Tammy R. Dugas, Stephania A. Cormier

Faculty Publications

© 2015 American Chemical Society. The "in situ burning" of trapped crude oil on the surface of Gulf waters during the 2010 Deepwater Horizon (DWH) oil spill released numerous pollutants, including combustion-generated particulate matter (PM). Limited information is available on the respiratory impact of inhaled in situ burned oil sail particulate matter (OSPM). Here we utilized PM collected from in situ burn plumes of the DWH oil spill to study the acute effects of exposure to OSPM on pulmonary health. OSPM caused dose-and time-dependent cytotoxicity and generated reactive oxygen species and superoxide radicals in vitro. Additionally, mice exposed to OSPM …


Deep Characterization Of The Microbiomes Of Calophya Spp. (Hemiptera: Calophyidae) Gall-Inducing Psyllids Reveals The Absence Of Plant Pathogenic Bacteria And Three Dominant Endosymbionts, Will A. Overholt, Rodrigo Diaz, Erin Rosskopf, Stefan J. Green, William A. Overholt Jul 2015

Deep Characterization Of The Microbiomes Of Calophya Spp. (Hemiptera: Calophyidae) Gall-Inducing Psyllids Reveals The Absence Of Plant Pathogenic Bacteria And Three Dominant Endosymbionts, Will A. Overholt, Rodrigo Diaz, Erin Rosskopf, Stefan J. Green, William A. Overholt

Faculty Publications

© This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. Bacteria associated with sap-feeding insect herbivores include not only symbionts that may increase their hosts' fitness but also harmful plant pathogens. Calophya spp. gall-inducing psyllids (Hemiptera: Calophyidae) are being investigated for their potential as biological control agents of the noxious weed, Brazilian peppertree (Schinus terebinthifolia), in Florida. Although there are no examples of plant pathogen transmission by …


Demographic Comparison Of Sweetpotato Weevil Reared On A Major Host, Ipomoea Batatas, And An Alternative Host, I. Triloba, Gadi V.P. Reddy, Hisn Chi Jul 2015

Demographic Comparison Of Sweetpotato Weevil Reared On A Major Host, Ipomoea Batatas, And An Alternative Host, I. Triloba, Gadi V.P. Reddy, Hisn Chi

Faculty Publications

In this study, we collected life table data for the sweetpotato weevil, Cylas formicarius, grown on Ipomoea batatas and Ipomoea triloba, and analyzed them using an age-stage, two-sex life table. We also demonstrated the growth potential of C. formicarius on these two host plants by using population projection. These data will be useful to the growers to the selection or eradication of host plants in an integrated control strategy for C. formicarius for the entire area of the targeted areas. We found that C. formicarius developed faster on I. batatas than on I. triloba. The developmental times of the larval …


Longitudinal Relations Between Prosocial Television Content And Adolescents’ Prosocial And Aggressive Behavior: The Mediating Role Of Empathic Concern And Self-Regulation, Laura M. Padilla-Walker, Sarah M. Coyne, Kevin M. Collier, Matthew G. Nielson Jul 2015

Longitudinal Relations Between Prosocial Television Content And Adolescents’ Prosocial And Aggressive Behavior: The Mediating Role Of Empathic Concern And Self-Regulation, Laura M. Padilla-Walker, Sarah M. Coyne, Kevin M. Collier, Matthew G. Nielson

Faculty Publications

The current study examined longitudinal cross-lagged associations between prosocial TV (content and time) and prosocial and aggressive behavior during adolescence, and explored the mediating role of empathic concern and self-regulation. Participants were 441 adolescents who reported on their 3 favorite TV shows at 2 time points, approximately 2 years apart (M age of child at Time 3 􏰀= 13.31, SD 􏰀= 1.06; 52% female; M age of child at Time 5 =􏰀 15.27, SD =􏰀 1.06). Results suggested that prosocial content at Time 3 was negatively associated with aggressive behavior 2 years later, and aggressive behavior at Time 3 was …