Digital Commons Network^™

Application Of Near-Infrared Spectroscopy For Hay Evaluation At Different Degrees Of Sample Preparation, Eun Chan Jeong, Kun Jun Han, Farhad Ahmadi, Yan Fen Li, Li Li Wang, Young Sang Yu, Jong Geun Kim

Faculty Publications

Objective: A study was conducted to quantify the performance differences of the near-infrared spectroscopy (NIRS) calibration models developed with different degrees of hay sample preparations. Methods: A total of 227 imported alfalfa (Medicago sativa L.) and another 360 imported timothy (Phleum pratense L.) hay samples were used to develop calibration models for nutrient value parameters such as moisture, neutral detergent fiber, acid detergent fiber, crude protein, and in vitro dry matter digestibility. Spectral data of hay samples prepared by milling into 1-mm particle size or unground were separately regressed against the wet chemistry results of the abovementioned parameters. Results: The …

Secondary Production And Biomass In Mussel Assemblages Relate To Species Richness And Stream Size But Not Life History, Jonathan W. Lopez, Carla L. Atkinson, Angela K. Burrow, Garrett W. Hopper, Wendell R. Haag

Faculty Publications

Increases in species richness with habitat area (species–area relationship, or SAR) and increases in ecosystem function with species richness (biodiversity–ecosystem functioning, or BEF) are widely studied ecological patterns. Incorporating functional trait analysis into assemblage datasets may help clarify interpretations of SAR and BEF relationships in natural ecological systems. For example, life history theory can be used to make predictions about what species are most important in generating ecosystem function given a certain set of environmental conditions. We used quantitative assemblage data for freshwater mussels at nine sites in western Alabama, USA, to test for SAR and BEF relationships. At each …

A Longitudinal Evaluation Of Personalized Intrinsic Network Topography And Cognitive Decline In Parkinson's Disease, Renxi Li, Vincent Pozorski, Kevin Dabbs, Maureen Haebig, Christopher R. Cox, Colleen Pletcher, Alexandra Wey, Amy Barzgari, Frances Theisen, Ozioma Okonkwo, Catherine L. Gallagher

Faculty Publications

Resting state functional magnetic resonance imaging (R-fMRI) offers insight into how synchrony within and between brain networks is altered in disease states. Individual and disease-related variability in intrinsic connectivity networks may influence our interpretation of R-fMRI data. We used a personalized approach designed to account for individual variation in the spatial location of correlation maxima to evaluate R-fMRI differences between Parkinson's disease (PD) patients who showed cognitive decline, those who remained cognitively stable and cognitively stable controls. We compared fMRI data from these participant groups, studied at baseline and 18 months later, using both network-based statistics (NBS) and calculations of …

Wood Ducks And Hooded Mergansers As Interspecific Brood Parasites: An Evaluation Of Parasitic Egg Survival, Dylan L. Bakner, Kevin M. Ringelman, Larry A. Reynolds, Richard M. Kaminski, Scott E. Stephens, J. Brian Davis

Faculty Publications

Conspecific and interspecific brood parasitism are alternate reproductive strategies more pervasive in waterfowl than in any other group of birds. While previous research has measured costs incurred by nest hosts incubating parasitized clutches, few studies have focused on the relative success of parasites. Here, we evaluated the success of wood duck (Aix sponsa) and hooded merganser (Lophodytes cucullatus) eggs laid parasitically in Louisiana and Mississippi. We monitored nest boxes, assigned eggs in each nest as host or parasitic, and determined the number of eggs that hatched and failed. Across all study areas (1994–1999 and 2020–2023), we monitored 1750 wood duck …

Wood Duck Nest Survival And Duckling Recruitment Is Minimally Affected By Interspecific Brood Parasitism From Hooded Mergansers And Black-Bellied Whistling-Ducks, Dylan L. Bakner, Kevin M. Ringelman, Larry A. Reynolds

Faculty Publications

In the southeastern United States, wood ducks (Aix sponsa) have historically experienced interspecific brood parasitism (IBP) primarily from hooded mergansers (Lophodytes cucullatus), but the recent northward expansion of black-bellied whistling-ducks (Dendrocygna autumnalis) has added a new complexity to these interactions. We monitored nest boxes in Louisiana to evaluate the influence IBP had on wood duck daily nest survival rate (after, DSR) and duckling recruitment. We monitored 1,295 wood duck nests from 2020−2023 and found 112 (8.7%) were parasitized by hooded mergansers and 148 (11.5%) by whistling-ducks. Parasitic egg-laying by hooded mergansers lowered wood duck DSR, while DSR for nests parasitized …

Potential Effects Of Traffic Noise On Anuran Call Characteristics In Louisiana, Usa During Winter, Jane M. Kunberger, Ty J. Price, Chloe Crawford, Allison A. Vestal-Laborde, Ashley M. Long

Faculty Publications

Urban environments expose wildlife to levels of anthropogenic noise they would not experience in rural areas (e.g., traffic noise), and research suggests that many species adjust their acoustic signals for optimal transmission in urban soundscapes. However, our understanding of anuran (order Anura) responses to noise pollution in urban environments of the southeastern United States is limited, particularly for species that can breed during winter. Our goal was to examine how vocal anuran advertisement call characteristics during winter varied with increasing distance from roadways in bottomland hardwoods of Louisiana, USA. We deployed acoustic recording units at two sites (i.e., rural and …

In Vitro Culture Alters Cell Lineage Composition And Cellular Metabolism Of Bovine Blastocyst, Hao Ming, Mingxiang Zhang, Sandeep Rajput, Deirdre Logsdon, Linkai Zhu, William B. Schoolcraft, Rebecca L. Krisher, Zongliang Jiang, Ye Yuan

Faculty Publications

Profiling bovine blastocyst transcriptome at the single-cell level has enabled us to reveal the first cell lineage segregation, during which the inner cell mass (ICM), trophectoderm (TE), and an undefined population of transitional cells were identified. By comparing the transcriptome of blastocysts derived in vivo (IVV), in vitro from a conventional culture medium (IVC), and in vitro from an optimized reduced nutrient culture medium (IVR), we found a delay of the cell fate commitment to ICM in the IVC and IVR embryos. Developmental potential differences between IVV, IVC, and IVR embryos were mainly contributed by ICM and transitional cells. Pathway …

Reading Colonial Transitions: Archival Evidence And The Archaeology Of Indigenous Action In Nineteenth-Century California, Lee M. Panich, Gustavo Flores, Michael Wilcox, Monica V. Arellano

Faculty Publications

Archaeologists in North America and elsewhere are increasingly examining long-term Indigenous presence across multiple colonial systems, despite lingering conceptual and methodological challenges. We examine this issue in California, where archaeologists and others have traditionally overlooked Native persistence in the years between the official closing of the region's Franciscan missions in the 1830s and the onset of US settler colonialism in the late 1840s. In particular, we advocate for the judicious use of the documentary record to ask new questions of Indigenous life during this short but critical period, when many Native Californians were freed from the missions and sought new …

Children’S Reading Of Visuals In Informational Picturebooks And Biographies, Sunah Chung

Faculty Publications

Visuals in picturebooks play an important role in supporting children’s reading comprehension and literacy development. This qualitative case study analyzes three American families’ shared reading practices at home by analyzing their online surveys for family literacy environments, reading logs for a month, mother interviews, and video observation of their shared reading at home. The analysis of the collected data categorizes children’s responses to visuals into three major themes: reflecting personal preferences and thoughts on visuals, interpreting visuals based on prior knowledge, and misreading visuals that interfere with understanding content. The discussion focuses on the roles of visuals in informational picturebooks …

Multifunctional Nanoparticles Of Porphyrins And Phthalocyanines: Review Of Synthetic Strategies And Emerging Applications, Olajumoke Helen Olubowale, Quynh Do, Neepa Kuruppu Arachchige, Deja Gabrielle Hebert, Jayne C. Garno

Faculty Publications

There is considerable research interest in the synthesis and characterization of organic-based nanoparticles because of the wide range of nanomaterials that can be designed with useful functional properties. With emerging research in the synthesis of organic nanoparticles comprised of porphyrins and phthalocyanines, there is a challenge to prepare multifunctional nanoparticles with the desired properties, size, and composition that are stable in environments that are exposed to stresses of pH, oxidation, or heat. This review describes innovative strategies that have been reported for synthesizing nanoparticles of porphyrins and phthalocyanines for applications. The tunability of the structure of porphyrinoid molecules through synthetic …

Colombia As A Future Tourism Destination From U.S. Travelers’ Perspective, Maricela I. Montes-Guerra, Natalia Zapata-Cuervo, Miyoung Jeong Ph.D.

Faculty Publications

This research identified the perceptions of U.S. travelers regarding Colombia as a potential tourism destination, including their perception of risk. The framework of destination image and travelers’ behavior, including perceived risk, cognitive and affective images, and perceived value for the trip, was adopted. Data for these behaviors were collected using a self-administered online survey with U.S. citizens who had not visited Colombia. Hypotheses were tested employing Confirmatory Factor Analysis and the Partial Least Squares method to analyze the measurement and structural models. The results indicated that U.S. citizens had a positive affective and cognitive perception of Colombia, which led to …

Fighting Erasure And Dispossession In The San Francisco Bay Area: Putting Archaeology To Work For The Muwekma Ohlone Tribe, Lee M. Panich, Monica V. Arellano, Michael Wilcox, Gustavo Flores

Faculty Publications

The Muwekma Ohlone Tribe has long been involved in the archaeology and stewardship of their ancestral homelands, both through their own cultural resource management (CRM) firm and though collaborations with academic and CRM archaeologists. In this article, we build on the past 40 years of archaeological collaborations in the southern San Francisco Bay region and offer examples of how archaeologists can support tribal heritage and environmental stewardship by using the traditional purview of material culture in combination with a broader array of evidence and concerns. As presented in our brief case studies, the Muwekma Ohlone Tribe and scholars are working …

Age, Growth, And Mortality Of Blackfin Tuna In The Gulf Of Mexico, E. M. Gutierrez, E. T. Lang, M. S. Lovell, J. Lang, B. J. Falterman, S. R. Midway, M. A. Dance

Faculty Publications

Objective: An otolith-based aging approach was used to evaluate age and growth relationships, sexual dimorphism in growth, and derive mortality estimates for Blackfin Tuna Thunnus atlanticus in the Gulf of Mexico (GOM). Methods: Blackfin Tuna (n = 395) were sampled from recreational fisheries and aged from 0 to 13 years, representing an increase over previous estimates of longevity for the species. Result: Rapid growth was exhibited during the first two years of life, and the Richards growth function provided a better fit (L∞ = 907 mm, k = 0.112 /year, a = 1.05, b = 0.25) to the data compared …

Selection Of Host Plants For Production Of Clanis Bilineata (Lepidoptera: Sphingidae), Xiaofeng Li, Mingming Guo, Kebin Li, Song Li, Honglin Feng, Jiwei Fan

Faculty Publications

Clanis bilineata Walker (Lepidoptera: Sphingidae), a burgeoning edible insect, is experiencing rising demand in China and other regions. Despite this interest, larval production is currently constrained by the limitations of artificial production technologies, particularly the selection of optimal host plants. This study rigorously evaluated the performance of C. bilineatha larvae on four main host plants: round-leaf soybean, pointed-leaf soybean, black locust, and kudzu. Preference tests demonstrated that the larvae were most attracted to black locust (34.76 ± 4.65%), with subsequent preferences for kudzu (25.00 ± 6.12%), round-leaf soybean (23.17 ± 2.79%), and pointed-leaf soybean (14.02 ± 4.74%). No significant preference …

Assessing The Long-Term Effects Of Conservation Agriculture On Cotton Production In Northeast Louisiana Using The Denitrification–Decomposition Model, Janntul Ferdush, Changyoon Jeong, Hwangju Jeon, Jim Wang, Kyoung Ro, Xi Zhang, Meesook Lee

Faculty Publications

Conservation agriculture (CA) aims to sustain agricultural production, soil, and environmental health in agroecosystems and has been promoted throughout the United States. The adoption of CA in cotton (Gossypium hirsutum) systems provides both agronomic and environmental benefits. Yet, there is limited information on the long-term effects of CA practices on crop yield and adaptation strategies. An integrated CA system, that is, cover crops with no-tillage (NT) instead of conventional agriculture, was implemented in the long-term field experiments and assessed with an integrated biogeochemical model. Using the denitrification–decomposition model, this study estimated the effects of four different cover crops, for example, …

Targeting Cancers With Ohsv-Based Oncolytic Viral Immunotherapy, Rakin Tammam Nasar, Ifeanyi Kingsley Uche, Konstantin G. Kousoulas

Faculty Publications

The recent success of cancer immunotherapies, such as immune checkpoint inhibitor (ICIs), monoclonal antibodies (mAbs), cancer vaccines, and adoptive cellular therapies (ACTs), has revolutionized traditional cancer treatment. However, these immunotherapeutic modalities have variable efficacies, and many of them exhibit adverse effects. Oncolytic viral Immunotherapy (OViT), whereby viruses are used to directly or indirectly induce anti-cancer immune responses, is emerging as a novel immunotherapy for treating patients with different types of cancer. The herpes simplex virus type-1 (HSV-1) possesses many characteristics that inform its use as an effective OViT agents and remains a leading candidate. Its recent clinical success resulted in …

A Theory Of Genetic Dimensions In The Law, Yaniv Heled, Liza Vertinsky, Ana Santos Rutschman

Faculty Publications

Since the biotechnology revolution of the 1970s, genetic science and genetic technology have captured the public imagination. They have become a centerpiece of how we understand ourselves, our relationship with other humans, other living beings, our environment, and—indeed—with the universe. Through this evolution of understanding, genetic phenomena have acquired many meanings, some rooted in objective reality and others subjective and dependent on individual perceptions and sentiments.

However, legal decision-making and policymaking have not kept pace and reflect only a partial understanding of the multiple dimensions of genetic phenomena, which are forced into narrowing legal pathways, neglecting vital interests. As the …

Spatial Roost Networks And Resource Selection Of Female Wild Turkeys, Nicholas W. Bakner, Erin E. Ulrey, Patrick H. Wightman, Nick A. Gulotta, Bret A. Collier, Michael J. Chamberlain

Faculty Publications

Wildlife demography is influenced by behavioural decisions, with sleep being a crucial avian behaviour. Avian species use roost sites to minimize thermoregulation costs, predation risk and enhance foraging efficiency. Sleep locations are often reused, forming networks within the home range. Our study, focusing on female eastern wild turkeys (Meleagris gallopavo silvestris) during the reproductive season, used social network analysis to quantify both roost site selection and network structure. We identified roost networks which were composed of a small percentage of hub roost sites connecting satellite roosts. Hub roosts were characterized by greater values of betweenness (β = 0.62, s.e. = …

Trophic Interactions In Microbiomes Influence Plant Host Population Size And Ecosystem Function, Jiaqi Tan, Na Wei, Martin M. Turcotte

Faculty Publications

Plant microbiomes that comprise diverse microorganisms, including prokaryotes, eukaryotes and viruses, are the key determinants of plant population dynamics and ecosystem function. Despite their importance, little is known about how species interactions (especially trophic interactions) between microbes from different domains modify the importance of microbiomes for plant hosts and ecosystems. Using the common duckweed Lemna minor, we experimentally examined the effects of predation (by bacterivorous protists) and parasitism (by bacteriophages) within microbiomes on plant population size and ecosystem phosphorus removal. Our results revealed that the addition of predators increased plant population size and phosphorus removal, whereas the addition of parasites …

Police-Made Law, Brenner M. Fissell

Faculty Publications

This Article presents evidence that police are writing laws that they enforce. This newly discovered phenomenon compounds the existing understanding of police “making” law through the exercise of discretion. They make law in a far more direct way, functioning as quasi-legislators at the local level—identifying a social problem, drafting an offense to address it, and directly proposing their offense for enactment. The conduct targeted, and the reasons for doing so, are diverse. For example, in one city a police chief successfully criminalized public intoxication so that intoxicated people would go to jails instead of hospitals; in another, a chief pushed …

Employing Digital Pcr For Enhanced Detection Of Perinatal Toxoplasma Gondii Infection: A Cross-Sectional Surveillance And Maternal-Infant Outcomes Study In El Salvador, Mary K. Lynn, Marvin Stanley Rodriguez Aquino, Pamela Michelle Cornejo Rivas, Xiomara Miranda, David F. Torres-Romero, Hanson Cowan, Madeleine M. Meyer, Willber D. Castro-Godoy, Mufaro Kanyangarara Ph.D., Stella Coker Watson Self Ph.D., Ms, Berry A. Campbell, Melissa Nolan Ph.D., Mph

Faculty Publications

Toxoplasma gondii is a parasitic infection that can be transmitted in utero, resulting in fetal chorioretinitis and other long-term neurological outcomes. If diagnosed early, pregnancy-safe chemotherapeutics can prevent vertical transmission. Unfortunately, diagnosis of acute, primary infection among pregnant women remains neglected, particularly in low-and-middle-income countries. Clinically actionable diagnosis is complex due to the commonality of infection during childhood and early adulthood which spawn long-last antibody titers and historically unreliable direct molecular diagnostics. The current study employed a cross-sectional T. gondii perinatal surveillance study using digital PCR, a next generation molecular diagnostic platform, and a maternal-fetal outcomes survey to ascertain …

Theory And Tools: The Future Of Technology-Based Learning (Slides), Andrew S. Gibbons Iii

Faculty Publications

We are entering a narrow passage that will see great instability in learning technology, instruction, and distance education. My purpose is to talk about two changes that I believe will redirect the entire future of technology-based education.

Techno-Economic Optimization Of A Hybrid Energy System With Limited Grid Connection In Pursuit Of Net Zero Carbon Emissions For New Zealand, Daniel Hill, Shafiqur Rahman Tito, Michael Walmsley, John Hedengren

Faculty Publications

As New Zealand moves towards net zero carbon emissions by 2050, multiple factors must be considered including increased electrical load due to electrification, variability of renewable energy generators, required storage capacity, system economics and limitations on grid transmission capacity. Complex and region-specific interactions between the various design choices involved are likely to require an understanding of a range of optimal and near-optimal designs for proposed micro-grid systems as opposed to a single optimal point. This work develops a novel multiscale optimization algorithm for optimization from a univariate capacity optimization approach to a multivariate one. This enhanced algorithm is applied to …

Detection Of Ochyromera Ligustri (Coleoptera: Curculionidae: Curculioninae) In Ligustrum Spp. (Oleaceae) Using Newly Developed Pcr Primers, Ilgoo Kang, Amy Roda, Brandi Misiaszek, Tanner Sparks, Rodrigo Diaz

Faculty Publications

Ligustrum spp. (Oleaceae) have become invasive species in the US and negatively affect native plant diversity and richness in forests. Ochyromera ligustri (Coleoptera: Curculionidae) is considered a potential biological control agent in the US because adults feed on the foliage and larvae are seed-feeders of Ligustrum spp. To discover the relationships between O. ligustri and Ligustrum spp., fruit dissections or rearing and field observations are required. In the current research project, novel PCR primers were developed to rapidly detect the DNA of O. ligustri in molecular analyses without rearing and observation. The developed PCR primers worked even with 0.01 ng …

Speech, Voice, And Language Outcomes Following Deep Brain Stimulation: A Systematic Review, Fatemeh Tabari, Joel I. Berger, Oliver Flouty, Brian Copeland, Jeremy D. Greenlee, Karim Johari

Faculty Publications

Background Deep brain stimulation (DBS) reliably ameliorates cardinal motor symptoms in Parkinson’s disease (PD) and essential tremor (ET). However, the effects of DBS on speech, voice and language have been inconsistent and have not been examined comprehensively in a single study. Objective We conducted a systematic analysis of literature by reviewing studies that examined the effects of DBS on speech, voice and language in PD and ET. Methods A total of 675 publications were retrieved from PubMed, Embase, CINHAL, Web of Science, Cochrane Library and Scopus databases. Based on our selection criteria, 90 papers were included in our analysis. The …

Exploring Pathways Toward Open-Hardware Ecosystems To Safeguard Genetic Resources For Biomedical Research Communities Using Aquatic Model Species, Yue Liu, Jack C. Koch, Lucía Arregui, Allyssa Oune, Sarah Bodenstein, Maria T. Gutierrez-Wing, Terrence R. Tiersch

Faculty Publications

Development of reliable germplasm repositories is critical for preservation of genetic resources of aquatic species, which are widely utilized to support biomedical innovation by providing a foundational source for naturally occurring variation and development of new variants through genetic manipulations. A significant barrier in repository development is the lack of cryopreservation capability and reproducibility across the research community, posing great risks of losing advances developed from billions of dollars of research investment. The emergence of open scientific hardware has fueled a new movement across biomedical research communities. With the increasing accessibility of consumer-level fabrication technologies, such as three-dimensional printers, open …

Transitioning From A Research Protocol To A Scalable Applied Pathway For Xenopus Laevis Sperm Cryopreservation At A National Stock Center: The Effect Of Cryoprotectants, Lucía Arregui, Jack C. Koch, Terrence R. Tiersch

Faculty Publications

Sperm cryopreservation is a critical tool for safeguarding and managing valuable genetic resources. Protocols for cryopreservation of Xenopus laevis sperm were available but lacking sperm quality evaluation and scalability and the outcomes were inconsistent. The goal of this study was to begin developing a center-level cryopreservation pathway for this species by integrating French straws as containers that would facilitate germplasm repository development. The objectives were to analyze the effect of: (1) three sperm concentrations (33, 50, and 100 × 106 sperm/mL) on post-thaw fertilization, (2) three final concentrations (2.5%, 5%, and 10%) of dimethyl sulfoxide, methanol, and dimethylformamide (DMFA) on …

Song And Genetic Divergence Within A Subspecies Of White-Crowned Sparrow (Zonotrichia Leucophrys Nuttalli), Amy Rongyan Luo, Sara Lipshutz, Jennifer Phillips, Robb T. Brumfield, Elizabeth Perrault Derryberry

Faculty Publications

Animal culture evolves alongside genomes, and the two modes of inheritance-culture and genes-interact in myriad ways. For example, stable geographic variation in culture can act as a reproductive barrier, thereby facilitating genetic divergence between "cultural populations."White-crowned sparrows (Zonotrichia leucophrys) are a well-established model species for bird song learning and cultural evolution, as they have distinct, geographically discrete, and culturally transmitted song types (i.e., song dialects). In this study, we tested the hypothesis that divergence between culturally transmitted songs drives genetic divergence within Nuttall's white-crowned sparrows (Z. l. nuttalli). In accordance with sexual selection theory, we hypothesized that cultural divergence between …

The Sequential Direct And Indirect Effects Of Mountain Uplift, Climatic Niche, And Floral Trait Evolution On Diversification Dynamics In An Andean Plant Clade, Agnes S. Dellinger, Laura Lagomarsino, Fabián Michelangeli, Stefan Dullinger, Stacey D. Smith

Faculty Publications

Why and how organismal lineages radiate is commonly studied through either assessing abiotic factors (biogeography, geomorphological processes, and climate) or biotic factors (traits and interactions). Despite increasing awareness that both abiotic and biotic processes may have important joint effects on diversification dynamics, few attempts have been made to quantify the relative importance and timing of these factors, and their potentially interlinked direct and indirect effects, on lineage diversification. We here combine assessments of historical biogeography, geomorphology, climatic niche, vegetative, and floral trait evolution to test whether these factors jointly, or in isolation, explain diversification dynamics of a Neotropical plant clade …

In The Spotlight—Early Career Researcher, Patricia Schneider

Faculty Publications

No abstract provided.