Digital Commons Network^™

Data Visualization, Dimensionality Reduction, And Data Alignment Via Manifold Learning, Andrés Felipe Duque Correa

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The high dimensionality of modern data introduces significant challenges in descriptive and exploratory data analysis. These challenges gave rise to extensive work on dimensionality reduction and manifold learning aiming to provide low dimensional representations that preserve or uncover intrinsic patterns and structures in the data. In this thesis, we expand the current literature in manifold learning developing two methods called DIG (Dynamical Information Geometry) and GRAE (Geometry Regularized Autoencoders). DIG is a method capable of finding low-dimensional representations of high-frequency multivariate time series data, especially suited for visualization. GRAE is a general framework which splices the well-established machinery from kernel …

Rainfall Increases Alpha And Has No Effect On The Beta Diversity Of Animal-Dispersed Shrubs In Panama, Rosemary Hopson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Climate patterns affect where plants can grow and survive. In tropical areas, the main form of precipitation is rain, and rainfall has been demonstrated to influence tree species distributions. For this thesis, I examined the relationship between rainfall and the diversity of animal-dispersed tropical shrubs. To do this, I used data on shrub diversity collected in the summer of 2017. Plots were established across the Isthmus of Panama, from the drier Pacific side to the wetter Atlantic side, to survey animal-dispersed shrubs. I analyzed three metrics of diversity that weigh rare and common species differently. The first weighs rare species …

Quantifying Floral Resource Availability Using Unmanned Aerial Systems And Machine Learning Classifications To Predict Bee Community Structure, Jesse Anjin Tabor

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bees are important for agricultural and non-agricultural ecosystems because they pollinate both wild plants and commercial crops. Flowers provide pollen and nectar resources that bees use to survive and reproduce. Measuring the relationship between the floral community and bee community may help apiarists and land managers to make informed decisions in managing wild and domesticated bee species. Manual methods to describe and count flowering vegetation is costly in time and personnel. Unmanned aerial vehicle (UAV) technology may be an efficient way to describe and count flowering vegetation on a large scale. UAVs with classification analysis and ground transect surveys were …

Event-Based Obstacle Detection With Commercial Lidar, Chaz Cornwall

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Computerized obstacle detection for moving vehicles is becoming more important as vehicle manufacturers make their systems more autonomous and safe. However, obstacle detection must operate quickly in dynamic environments such as driving at highway speeds. A unique obstacle detection system using 3D changes in the environment is proposed. Furthermore, these 3D changes are shown to contain sufficient information for avoiding obstacles. To make the system easy to integrate onto a vehicle, additional processing is implemented to remove unnecessary dependencies. This system provides a method for obstacle detection that breaks away from typical systems to be more efficient.

Pronghorn Space-Use Ecology In Utah, Veronica A. Winter

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Pronghorn are viewed as a quintessential part of the landscape in the American West. Found only in western North America, pronghorn is a unique species, having historic ranges within prairie, shrubland-steppe, and desert habitat across the continental west. Even though they have been present on this landscape since the last ice age, little is known of pronghorn ecology. There has been growing concern over the impact anthropogenic features, such as development, agriculture, and roads are having on migration, seasonal range conditions, and overall population dynamics. The aim of this thesis is to investigate factors that may be important for pronghorn …

Design Of Environment Aware Planning Heuristics For Complex Navigation Objectives, Carter D. Bailey

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A heuristic is the simplified approximations that helps guide a planner in deducing the best way to move forward. Heuristics are valued in many modern AI algorithms and decision-making architectures due to their ability to drastically reduce computation time. Particularly in robotics, path planning heuristics are widely leveraged to aid in navigation and exploration. As the robotic platform explores and navigates, information about the world can and should be used to augment and update the heuristic to guide solutions. Complex heuristics that can account for environmental factors, robot capabilities, and desired actions provide optimal results with little wasted exploration, but …

An Evaluation Of Landscape, Climate, And Management Impacts On Bumble Bees (Hymenoptera: Apidae: Bombus) In Agroecosystems, Morgan Elizabeth Christman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bumble bees play pivotal roles in pollinating wild and cultivated plant communities. Unfortunately, bumble bee populations are declining due to disturbances such as landscape conversion and climate change. Additionally, traps used to monitor pest insect populations often capture bumble bees, leading to a concern that trap captures increase bumble bee mortality. First, I studied bumble bee communities based on land cover and weather variables in agricultural fields in Utah. Bumble bee communities were more diverse in agricultural fields with more agricultural land in the surrounding area, low temperatures, and high humidity during the growing season, and less diverse in fields …

Dynamic System Discovery With Recursive Physics-Informed Neural Networks, Jarrod Mau

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This thesis presents a novel method, recursive Physics informed neural network, to learn the right hand side of differential equations. The neural network takes in data, then trains, and then acts as a proxy for the differential equation which can be used for modeling. We show the theoretical superiority of the recursive approach. We also use computer simulations to demonstrate the proved properties.

Biodiversity And Foraging Preferences Of Bee Communities At Pinnacles National Park Over Time, Abigail M. E. Lehner

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bees are considered to be the most important animal pollinator, providing billions of dollars in pollination services each year. Despite their importance in both natural and agricultural settings, the status of most native bees is unknown. Native bees are subject to a variety of threats including habitat loss, pesticide use, and climate change. Yet, monitoring programs have been implemented in few natural areas. Pinnacles National Park, PNP, in California is one of the only natural areas to have a large historical dataset on bees across decades with surveys conducted in 1996, 1997, 1998, 1999, 2002, 2011, and 2012. These surveys …

Cuo Nanoparticles Solubility As Influenced By Soil Pore Water, Native Microorganisms, And Wheat Rhizosphere Chemistry In A Sand Matrix, Dakota Sparks

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Nanoparticles (NPs) are particles less than 100 nm (~4 millionths of an inch) in a direction. NPs, due to their small size, are used in a variety of products, such as silver (Ag) NPs as an antimicrobial in clothes. Copper Oxide (CuO) NPs are used in electronics as semiconductors and other fields as antimicrobials and purposefully or accidentally end up in the environment. Copper (Cu) is a necessary nutrient for plants, but at higher amounts is toxic to plants and beneficial soil microbes.

In order to understand how the CuO NPs interacts with plants, wheat seedlings were grown in sand …

Holocene Chronostratigraphy Of Dune Fields In Southern Utah: Geomorphic Record Of Past Aridity In The Central Colorado Plateau, Harriet S. Cornachione

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The southwestern United States is characterized by dry climate, and droughts are common. The region is currently in an extreme drought that began in 2000 CE and has lasted longer than any previous drought in at least 500 years. Models predict greater future climate extremes under human-caused climate change. Understanding of the natural range of climate variability is important to put these changes in context. Sedimentary archives of past sand dune activity can help extend the available instrumental observations (last century) and tree-ring records (last millennium).

Sand dunes are landforms that are sensitive to aridity and decreased vegetation cover. They …

Conservation Genetics Of A Declining Bumble Bee In Western North America; The Influence Of Geography, Dispersal Limitation, And Anthopogenic Activity, Ashley T. Rohde

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Conservation biology addresses the problem of species loss by identifying species in need of protection. Conservation biology has subfields to address different aspects of biodiversity loss, including genetics and sociology. I used genetic approaches to assess the conservation status of western bumble bees, a bumble bee species of conservation concern.

The western bumble bee is a bumble bee species that ranges from Alaska to New Mexico and as far east as Wyoming and Colorado. This species is disappearing in some places. It may soon be listed as endangered in the United States and is already listed as endangered in parts …

Soil Genesis Across A Climo-Lithosequence Of Western Haleakalā, Maui, Ryan C. Hodges

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The soils of western Haleakalā are incredibly diverse due to two primary reasons: 1) they receive varying levels of rainfall based on location relative to Haleakalā, and 2) volcanic vents upwind of the area indicate that volcanic ash has blanketed much of western Haleakalā in the past. Ash can weather to form short-range-order materials, which contribute to the classification of andic soil properties. Due to their structure, short-range-order materials impart soil behavior that creates benefits and challenges in land management. Therefore, an understanding of how these soils formed and differ, and where andic soils occur is crucial.

The objectives of …

Management Of Garlic Mustard (Alliaria Petiolata), Sahara Mustard (Brassica Tournefortii), And Elongated Mustard (Brassica Elongata) In Utah, Natalie Layne Fronk

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The invasive mustard species Sahara mustard (Brassica tournefortii), garlic mustard (Alliaria petiolata) and elongated mustard (Brassica elongata) negatively impact a variety of ecological systems across the state of Utah. The distribution of these species in Utah is relatively limited at the current time. If prompt action is taken, it may be possible to contain and manage these species before irreparable ecological and agricultural damage occurs. For this reason, all three mustards are listed by the State of Utah as weeds of high priority for management.

This project tested multiple strategies to determine effective species-specific …

Investigating Cause-Specific Mortality Of Sheep To Determine The Impacts Of Carnivores On Domestic Livestock, Nathan Jacob Floyd

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Livestock and carnivores interact in ways that are considered conflict throughout the world. In the western United States, livestock are often grazed on public lands in close proximity to predators in their natural habitat, and can be killed as prey. Livestock losses to predators can threaten rancher’s livelihoods. Sheep and lambs are especially vulnerable to predators due to their small size and lack of defensive abilities. To reduce the impacts that predators have on livestock, it is important for ranchers and wildlife biologists to have an accurate understanding of how many livestock die and are killed by predators when grazing …

High-Isolation Antenna Technique For Cubesat-Borne, Continuous-Waveform Radar, Logan E. Voigt

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Radar is important in target tracking, imaging, and weather prediction applications. As technology is increasingly miniaturized, there is a push for smaller radar. Research and exploration in outer space also benefit from small, low-power technologies. The NASA Jet Propulsion Laboratory’s RainCube was the first successful CubeSat-borne radar. A CubeSat is a type of small satellite that conforms to specific size and weight standards. Radar technology benefits from additional research on how to further miniaturize radar payloads.

Integrating the transmit and receive antennas on the solar panels removes the need for antenna-deployment mechanisms, preserving space on the CubeSat. This thesis also …

The Personal Is Still Political: An Analysis Of Jessica Valenti's Contemporary Feminine Style, Michala M. Zilkey

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In 2016, Jessica Valenti’s memoir, Sex Object, was published. Sex Object describes Valenti’s experiences of sexualization and objectification in a personal and anecdotal format. The feminine style, a rhetorical style that bridges the divide between norms of femininity and expectations of public oration, has been heralded as essential for advancing the feminist movement. This thesis asks the question, to what extent does contemporary feminists’ rhetoric mirror and diverge from earlier iterations of the feminine style? I argue that Valenti’s employs a feminine style that utilizes relational norms and self-disclosure to illustrate the personal as political and the political as …

Urban Soil Chemical And Nutrient Management Issues Facing Emerging Small Grower Enterprises In Utah, Frank E. Oliver

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Knowledge of both soil quality and contamination has become increasingly important with the growth of urban agriculture in Utah and the United States as whole. Land is also a common limiting factor in urban agriculture, so it is important to maximize yield and net returns. In order to meet these demands, three studies were conducted across key urban agriculture sites along the Wasatch Front: 1) an urban soil survey to assess soil contamination, 2) an urban soil survey to evaluate macronutrient and salinity levels, and 3) a nitrogen fertilizer management trial for dahlia (Dahlia pinnata), a cut flower …

Institutional Betrayal Related To Sexual Trauma In Military Service Members And Veterans: An Examination Of Posttraumatic Sequelae, Felicia Andresen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Military sexual harassment and/or assault (MSH/A) is pervasive and destructive. MSH/A survivors who believe the institution played a role in the traumatic experience by failing to respond in a supportive manner or for failing to keep them safe may feel betrayed by the military itself, a concept referred to as institutional betrayal. Previous research suggests it is more harmful to be abused by trusted others or institutions due to the violation of trust. This two-study dissertation explored experiences of MSH/A-related institutional betrayal to identify survivors at-risk for worse posttraumatic outcomes.

Study #1 evaluated whether PTSD explained the relationship between …

Teacher Home Visits: Changes In Perceptions Of Key Stakeholders, Kevin R. Thomas

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Teacher home visits have been shown to improve student attendance, academics and to reduce behavior issues. Three groups are involved: the student, the teacher, and the family (or parent). This research focused on determining if and how the teacher home visit changes the perspectives, expectations, and relationships of these three groups. A survey followed by interviews of some of the students, parents, and teachers was used. The surveys and the interviews were evaluated. Results indicated that perceptions and relationships between stakeholders were improved. Due to low participation rates, results must be interpreted with caution. With these considerations in mind, I …

Bugs Buy Steady Releases From Hydropower Producers To Encourage More Synergistic Reservoir Management, Moazzam Ali Rind

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Hydropower generated from dams has significant economic value, however, that value is achieved at the cost of native ecosystem devastation. Here, we have estimated loss in hydropower revenue due to inclusion of the steady low flow days –Bug Flow Experiments. We developed a linear optimization model and constraint method that restrict the number of steady low flow days while maximizes the hydropower revenue generation. The results suggested that increase in release volume will benefit both the objectives (win-win scenario), energy price differential between on-and off-peak periods controls the position and shape of tradeoff curves, and offset release does not have …

Evaluating Microbial Safety Of Food Products And Processes In Small Scale Food Services, Processors And Manufacturers, Sujan Acharya

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study evaluated microbial safety of relatively new and modified food products prepared especially by small-scale foodservice establishments and home producers. In the first part, microbial safety during fermentation at room temperature was evaluated. Chapter 3 monitored Listeria monocytogenes and Escherichia coli O157 survival during Sauerkraut’s natural fermentation. Chapter 4 evaluated the survival of acid-adapted E.coli O157 during kombucha fermentation and in kombucha-fruit blend during refrigeration. During both fermentations, the pathogens were inactivated before the recommended duration of fermentation. However, E.coli O157 introduced after fermentation survived in kombucha-fruit blends during refrigerated storage. The second part (Chapter 5) evaluated the safety …

A Social-Ecological Approach To Understanding The Structure, Function, And Challenges Faced By Fisheries, Chase C. Lamborn

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Fisheries throughout the world play many important roles, and they are also subject to many pressures. The tension between roles and pressures is increasing, and as a result, many fisheries are being utilized to, or over their capacity, which ultimately threatens their sustainability. To address these challenges, this dissertation provides insights and tools to help us better understand fisheries and the challenges they face. The first study explores the impacts of an earlier spring runoff in Montana. Earlier runoff has resulted in lower and warmer summer flows, which is stressing coldwater species like trout. This stress is affecting fishing quality, …

Emotional Support Animal Partnerships: A Multimethod Investigation, Jillian Ferrell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Emotional Support Animals (ESAs) are increasing in prevalence and awareness, though not all the publicity and attention have been positive. Many people, including housing officials, persons with disabilities, health professionals, and the general public are confused about the roles and rights of ESAs. Misunderstandings, lack of awareness, and fraud have led to dangerous and inappropriate situations for humans and animals alike despite overwhelming evidence of powerful therapeutic benefits of the human animal bond.

Three studies provide insight into various perspectives involved in ESA partnership experiences and development. Each study provides a theoretical, quantitative, and qualitative approach, respectively, to explore the …

Conservation Conflict: Rare Plant Conservation And Energy Development And Potential In The Colorado Plateau, Joshua Carrell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Colorado Plateau provides numerous sources of energy, particularly natural oil and gas. This energy potential is being actively extracted for consumption on both public and private lands. Elements of biodiversity (e.g., listed and sensitive plant and animal species) are distributed among all land tenures, yet the laws protecting them can vary depending if they occur on public, private, or tribal land. Therefore, it is necessary to understand the geographic ranges of threatened, endangered, and sensitive species and their relationship to land ownership to preserve habitat and conserve species populations. I developed species distribution models (SDMs) to examine the predicted …

Spatial-Temporal Responses Of Cow Elk To Targeted And Non-Targeted Hunting Risk, Randall Mcbride

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Predation is one of the most important interspecies interactions that affect a wildlife population. Predator-prey interactions may cause species to shift their behavior, such as changing the use of their habitat in both space and time, based on their ability to assess risk. Wildlife population responses to predation stresses have been studied in the past, but individuals' responses to these stresses have not been studied in fine detail. For this study, cow elk were collared with GPS collars, and hunters carried hand-held GPS units. GPS locations were taken at 10-minute intervals for both cow elk and hunters during the hunting …

Examining The Effectiveness Of Explicit, Systematic Mathematics Vocabulary Instruction For Students With Learning Difficulties And Disabilities In A Specialized Setting, Kristen R. Rolf

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Many students in the United States are not proficient in mathematics. Mathematics vocabulary is one area that may impact students’ understanding of and engagement with mathematics. This dissertation investigated the implementation, effectiveness, and teacher’s perceptions of a program for teaching mathematics vocabulary necessary for fourth grade and beyond.

This study randomly assigned 30 students (11-14 years old) to receive mathematics vocabulary instruction or not. Three teachers at a school for students with learning difficulties and disabilities administered mathematics vocabulary and mathematics achievement tests to all of their students before teaching the program to 17 of the students. A research assistant …

Modeling A Pandemic: Investigating Student Learning About Disease Spread In The Context Of Agent-Based Modeling, Siyu Wu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The COVID-19 pandemic has highlighted a need for students to learn about public health issues, including the transmission of disease and methods for the prevention of epidemics. This study presents data from a project focused on developing computational microworlds to help middle school students learn about these topics. The microworld is designed to help students model and test their ideas about how a disease spreads through a population and how an epidemic can be prevented. I employed a lab-based case study approach to conduct one-on-one 1.5-hour interviews through Zoom with four middle-school students (ages 12-14). During the interview, the student …

Using Cytoplasmic Biopsies To Determine Bovine Oocyte Quality, Madison Lindsey

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Embryos resulting from assisted reproductive technologies, such as in vitro fertilization (IVF) or intracytoplasmic sperm injection (ICSI), develop with lower efficiencies than embryos resulting from their in vivo counterparts. The reasons behind the developmental discrepancies remain largely unknown. Because the egg is the primary determinant of embryo developmental success, it is reasonable to consider inherent egg quality as a possible cause. The hypothesis for this project is that there are distinct mRNA transcript patterns, or molecular “fingerprints,” that distinguish high- versus low-quality eggs developing within the same environment. In this study, a small cytoplasmic biopsy was removed from 40 eggs …

Natural History And Development Of Melittobia Acasta On Megachile Rotunda , Alan R. Anderson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Alfalfa is one of the most economically important crops in North America. To produce alfalfa seed, a pollinator must release plant reproductive organs by applying pressure to keel petals. The alfalfa leafcutting bee, Megachile rotundata, is the primary commercial pollinator of alfalfa. U.S. bee managers struggle to maintain populations due to many mortality factors. One cause is attack from parasitoid wasps such as Melittobia acasta. Females can lay hundreds of eggs and have multiple generations, which can decimate bee stocks. Chapter Two investigates the life cycle and base temperature that allows development of M. acasta on bee hosts. …