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Impact Of Basal Diet On Obesity Phenotype Of Recipient Mice Following Fecal Microbiome Transfer From Obese Or Lean Human Donors, Daphne Michelle Rodriguez Jimenez

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The composition of the gut microbiome can be affected by environmental factors, such as diet. The Western dietary pattern is associated with microbiome dysbiosis and adverse health outcomes, including obesity and metabolic disorders. The objective of this study was to examine the effect of gut microbiota from lean or obese human donors on metabolism and weight gain in recipient mice fed one of three basal diets: 1) the standard AIN93G diet, which promotes rodent health; 2) the total Western diet (TWD), which mimics the American dietary pattern and promotes inflammation-associated colorectal carcinogenesis; and 3) a 45% high fat diet-induced obesity …

Gene-Environment Interaction: Brain-Derived Neurotrophic Factor (Bdnf) As A Moderating Factor For The Effects Of Exercise And Diet On Cognitive And Mental Health: The Cache County Study On Memory In Aging, Chelsea L. Sanders

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Cache County Study on Memory in Aging, funded by the National Institute on Aging, studied longitudinal changes in memory and aging over 12 years’ follow-up in a population-based sample of 5,092 older adults in semirural Cache County, UT. Among the extensive interview procedures, researchers collected information regarding the participants’ demographics, health, genetic factors, diet, physical activity, and cognitive abilities. This study has allowed researchers to investigate how genetic and modifiable lifestyle factors interact to predict health, cognitive function, and psychological wellbeing in older adults.

Diet and exercise are important lifestyle factors in maintaining cognitive health and psychological wellbeing throughout …

The Effects Of Enhanced Flows On Community Structure And Ecosystem Functioning In A Montane Utah River System, Joshua A. Epperly

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Due to growing human demands for freshwater within the last century, manmade flow alterations are now a common characteristic of rivers worldwide. Alterations to the volume and timing of flows in rivers are known to negatively impact aquatic biodiversity, biological productivity and ecosystem functions such as nutrient cycling. While previous research has focused on the effects of flow reductions and spates, there is a lack of knowledge on how high flows across longer timespans (i.e. ‘enhanced flows’) impact the structure of river communities and the integrity of ecosystem functions.

The Utah Reclamation, Mitigation and Conservation Commission has expressed interest in …

Development And Characterization Of Reporter-Expressing Zika Viruses, Michael E. Woolley

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In recent years, Zika virus (ZIKV) has garnered worldwide attention due to its epidemic spread throughout the Americas and due to the newly recognized link between ZIKV infection and neurological diseases, including microcephaly and Guillain-Barré syndrome. ZIKV is a mosquito-borne member of the genus Flavivirus, which includes the other prominent human pathogens Japanese encephalitis virus, West Nile virus, dengue virus, and yellow fever virus. Many questions about the biology of ZIKV and how it causes disease remain unanswered. Furthermore, there currently are no vaccines or licensed antiviral drugs available to treat ZIKV infection. The goal of this study was to …

Impacts Of Phragmites Australis Management On Wetland Plant Community Recovery, Seedbank Composition, And The Physical Environment In The Chesapeake Bay, Eric L. G. Hazelton

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Biological invasions have adverse economic, cultural, and ecological effects worldwide. Among the most impactful in North America is the invasion of Phragmites australis (Phragmites), a large-scale clonal grass that rapidly colonizes wetlands. Phragmites crowds out native plants and alters habitat for native fauna. In doing so, Phragmites also alters human access to water resources and has adverse economic effects, including decreasing property value, inhibiting recreational use, and limiting populations of game species.

The efforts described in this dissertation are a component of a large, multidisciplinary effort to better understand the anthropogenic stressors to Chesapeake Bay, Maryland, at the …

A Modern Plague: U.S. Racial And Ethnic Vaccination Disparities During The 2009 H1n1 Influenza Pandemic, Andrew E. Burger

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

On June 11, 2009 the World Health Organization announced that a novel strain of H1N1 influenza was being classified a Phase 6 pandemic, the highest level of alarm indicating that the disease was present worldwide and its spread was inevitable. While seasonal influenza epidemics occur annually, the 2009 H1N1 strain was the first novel pandemic influenza since the 1968 Hong Kong flu. The 2009 H1N1 pandemic provides a case study of how the U.S. population responded to an emergent and potentially lethal infectious disease. The richness and variety of public health data presents an opportunity to examine predictors of vaccination …

Association Learning Via Deep Neural Networks, Trevor J. Landeen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Deep learning has been making headlines in recent years and is often portrayed as an emerging technology on a meteoric rise towards fully sentient artificial intelligence. In reality, deep learning is the most recent renaissance of a 70 year old technology and is far from possessing true intelligence. The renewed interest is motivated by recent successes in challenging problems, the accessibility made possible by hardware developments, and dataset availability.

The predecessor to deep learning, commonly known as the artificial neural network, is a computational network setup to mimic the biological neural structure found in brains. However, unlike human brains, artificial …

The Use Of Microfluidics And Dielectrophoresis For Separation, Concentration, And Identification Of Bacteria, Cynthia Hanson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Typical bacterial analysis involves culturing and visualizing colonies on an array of agar plates. The growth patterns and colors among the array are used to identify the bacteria. For fast growing bacteria such as Escherichia coli, analysis will take one to two days. However, slow growing bacteria such as mycobacteria can take weeks to identify. In addition, there are some species of bacteria that are viable but nonculturable. This lengthy analysis time is unacceptable for life-threatening infections and emergency situations. It is clear that to decrease the analysis of the bacteria, the culturing and growth steps must be avoided. …

Investigations Of Polyhydroxyalkanoate Secretion And Production Using Sustainable Carbon Sources, Chad L. Nielsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Polyhydroxyalkanoates (PHAs) are a type of biologically-produced plastic known for their biocompatibility and biodegradability. They have the potential to replace petroleum-based plastics as an environmentally-friendly alternative. This is beneficial because the release of plastics into environments such as the ocean and the buildup of plastics in landfills are major concerns facing society today. Currently, however, PHAs are significantly more expensive than their petroleum-based counterparts. This is largely due to the cost of carbon sources and of extracting the bioplastics from bacteria. The goal of these studies was to examine replacing traditional carbon sources used in PHA production like sugar and …

Breeding Season Ecology And Demography Of Lesser Scaup (Aythya Affinis) At Red Rock Lakes National Wildlife Refuge, Jeffrey M. Warren

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

It is hypothesized that individuals make reproductive decisions based on current assessments of their physiological condition and environmental conditions. For female lesser scaup (Aythya affinis), breeding occurs after an energetically costly spring migration. Increasing fat reserves (i.e., ‘body condition’) prior to breeding allows a female to produce a larger clutch of eggs, but time spent gaining body condition is costly in terms of time allowed to raise ducklings before freezing conditions in the fall. In Chapter 2 I explored rate of pre-breeding body condition gain in female lesser scaup, and how that rate influenced clutch size. Spring phenology, …

Targeted-Grazing As A Fuels Reduction Treatment: Evaluation Of Vegetation Dynamics And Utilization Levels, Travis Decker

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Wildfires have caused concern as they have increased in severity and intensity over the last few decades. Land managers have sought management actions to mitigate the risk of wildfire by reducing fuel loads, thus decreasing wildfire intensity. Camp Williams is a National Guard camp near Bluffdale, Utah, where small arms and artillery training occurs. Managers at Camp Williams have created fuel breaks by implementing targeted sheep and goat grazing to remove fine fuel and thin brush. Management objectives set utilization of fine fuels (herbaceous) at 80% by weight. Questions arose regarding the ecological impact of the prescribed grazing rates in …

Foraging Behavior, Taxonomy, And Morphology Of Bees (Hymenoptera: Apoidea), With An Emphasis On Perdita (Hymenoptera: Andrenidae), Zachary M. Portman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Bees are the most important pollinators of flowering plants and are necessary for pollinating both wild plants and many of the crops that produce the food we eat. There are many different species of bees, with about 20,000 species worldwide and 4,000 species in the United States. Even though bees are important pollinators, there is still much we do not know about how many species there are and their biology. In order to better understand the species and their biology, I performed three projects that help fill these gaps by reviewing the species of a poorly known bee group, examining …

Managing For Multiple Objectives In Southwestern Forests: Evaluating The Trade-Offs Between Enhancing Mexican Spotted Owl Nest Habitat And Mitigating Potential Crown Fire, Daniel C. Deane Mckenna

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Forest Inventory and Analysis (FIA), the United States’ forest census, measured sixty-six Mexican spotted owl nest stands in order gain insight into the structure and composition of the nest habitat of this threatened species. I used these data, along with the greater FIA database and the Forest Vegetation Simulator to explore questions surrounding the management of Mexican spotted owl habitat, specifically how to balance the objective of sustaining and enhancing nest habitat in face of increasing forest fire size and severity in the Southwest. My research consisted of three studies. The first study quantified the structure and composition of …

Pruning Strategies For High Density ‘Montmorency' Tart Cherry, Sheriden M. Hansen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The tart cherry (Prunus cerasus) is the most significant fruit tree crop in Utah, accounting for roughly 51% of the total statewide commercial fruit acreage. In order to accommodate harvesting equipment, tart cherries are grown in conventional orchards with large trees spaced up to 5.5 meters apart. New methods of harvest are adapted to smaller trees in tighter spaced high density (HD) orchards. HD orchards bear fruit earlier in the orchard life than conventional orchards, but likely require different pruning and management strategies, which have not yet been determined for tart cherry. Experimental HD orchards were used to …

Evaluating Water Filtration And Disinfection For Household, Using Slow Sand Filters Plus Solar Disinfection, Mariana Demitry

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In this research, a household water treatment system was built and evaluated as a trial for improving the drinking water quality of the Nile River for the low-income communities. The system consisted of household-scale slow sand filters, and transparent polyethylene terephthalate-bottles for solar disinfection. The evaluation of the system depended on the removal/inactivation of some surrogates for the reference pathogens, and turbidity. The reference pathogens are pathogens specified by the World Health Organization to evaluate the efficiency of the household water treatment options. They were chosen to represent the classes of pathogens in water (bacteria, viruses, protozoa). The surrogates used …

In-Situ Educational Research From Concept To Classroom Implementation: A Multiple Paper Dissertation, David Mark Weiss

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

An educational researcher sought to collaborate with a classroom instructor to introduce problem-based learning as a new teaching intervention. First, a classroom instructor was approached to consider how a problem-based learning instructional approach might fit with their existing curriculum plan. The researcher and the classroom teacher used a discussion framework to decide together how to best design a professional learning course meant to prepare the teacher to use the new techniques in their classroom. The teacher took the professional learning course and subsequently designed his own problem-based learning course. That course was then delivered to undergraduate students in a college …

Advancement To The Highest Faculty Ranks In Academic Stem: Explaining The Gender Gap At Usu, Helga Van Miegroet

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Science and technology (S&T) disciplines at universities are still largely dominated by men, and few women are found in the highest employment ranks. Using the faculty data from Utah State University, this thesis explores the factors that help explain the difference in career trajectory between men and women in the S&T colleges. While there were few women in S&T colleges prior to the 1990s, more women have been hired since then, and the lower ranks of the faculty corps are starting to reflect the gender composition of the doctoral degree holders in the different fields. This is not the case …

Using Remotely Piloted Aircraft And Infrared Technology To Detect And Monitor Greater Sage-Grouse, Thomas R. Thompson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In wildlife management, using cutting edge technology and science to monitor greater sage-grouse (Centrocercus urophasianus; sage-grouse) populations, enables land managers to better assess the impact of their management decisions. Having precise counts of sage-grouse lek attendance, and specifically male lek attendance, is an important metric used to evaluate population status and response to conservation actions (Gifford et.al, 2013, Dahlgren et al., 2016). Leks are seasonal breeding sites where males perform a ritualistic courtship dance for females.

Our case study examined if a Remotely Piloted Aircraft (RPA) was effective in detecting, and counting, sage-grouse during the lek season (early …

The Influence Of Multiyear Drought-Driven Habitat Loss On The Bear Lake Sculpin (Cottus Extensus) And The Bear Lake Strain Of The Bonneville Cutthroat Trout (Oncorhynchus Clarkii Utah), Hayley C. Glassic

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Multiyear drought is expected to increase in occurrence and severity in dry regions across the world, such as the American Southwest, endangering native species and ecosystem health. The effects of multiyear drought are often worsened by human water use for consumption, energy production, and agriculture, which, in lakes and reservoirs, cause reduced lake elevation. Reductions in lake elevation may leave previously submerged habitat stranded along shorelines and make tributaries inaccessible to fishes. Here, we show that decreasing lake elevation, associated with drought and water withdrawal, reduces the availability of shoreline cobble habitat to fishes and increases tributary distance by creating …

Effect Of High Intensity Ultrasound On The Crystallization Behavior Of Interesterified Fats, Jeta Vijay Kadamne

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The process of partial hydrogenation produces trans fats and the fats that undergo this process are called partially hydrogenated fats (PHF). Clinical studies have shown a strong association between PHF and coronary heart diseases. In 2015 The U.S. Food and Drug Administration removed the Generally recognized as safe or "GRAS" status of PHF. These fats were used in confectionary, margarines, shortenings, doughnuts, cookies, cakes, etc. The PHF serve a function in food by providing a higher shelf life and a desired harder structure due to their higher melting point. Hence, the food industry is currently looking for PHF alternatives which …

Elucidating Molecular Interactions Of Shigella Type Three Secretion System Components Critical For Pathogenesis, R. Alan Burgess

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Shigella are pathogenic bacteria which commonly infect human hosts through the fecal-oral route. As the causative agent of shigellosis, a disease characterized by severe diarrhea, nausea, and vomiting, Shigella are responsible for an estimated 90 million infections and 100,000 deaths each year. With the emergence of antibiotic resistant strains of Shigella, the need for alternative treatments methods has become critical to fighting outbreaks of shigellosis and drug resistant strains. One such method is to target the infection system of the bacteria, called the type three secretion system (T3SS). The T3SS includes a complex needle and syringe-like apparatus that is …

A Qualitative Analysis Exploring The Development Of Problematic Sexual Behaviors In Adolescent Males With Developmental Disabilities, Maria J. Watters

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Adolescents with developmental disabilities (DD) experience regular physical and sexual development. Some adolescents with developmental disabilities engage in problematic sexual behaviors (PSB). In order to be able to address the needs of this population in terms of prevention of PSB, and provision of effective treatment after PSB has begun, their experience must be understood and contributing factors identified. It is with this in mind that this study was designed, with the purpose being the exploration of the experiences of adolescents with DD who have engaged in sexually problematic behaviors, including compulsive or addictive patterns of behavior, and to identify the …

Evaluation Of A Side-By-Side Full-Scale Biofiltration Conversion In A Nutrient-Limited Environment, Stetson S. Bassett

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In order to meet increasing water demands and more stringent regulations drinking water treatment plant managers must continually look to new treatment strategies and optimization techniques. One such strategy is to eliminate chlorine residual before filtration, allowing indigenous bacteria already present in the source water to grow on the filter media. These microorganisms help improve effluent water quality by increasing organic and inorganic contaminant removal. The process is known as biological filtration, or biofiltration. The implications of converting a conventional filtration plant (not specifically designed for biofiltration) to a biofiltration plant are still not well understood. Therefore, the purpose of …

Does Neighborhood Context Matter? A Multilevel Analysis Of Neighborhood Disadvantage And Sleep Health, Carlyn E. Graham

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Childhood is one of the most important stages for physical and cognitive growth during the life course. For young children, sleep is one of the major contributors to healthy development; poor sleep quality and short sleep duration can detrimentally affect developmental progress. In addition to physiological contributors to poor sleep, social factors may affect young children’s sleep. Prior findings suggest that demographic and socioeconomic characteristics, such as race and parent’s educational attainment, may contribute to sleep health for children. Furthermore, limited prior research suggests that neighborhood attributes may affect sleep for both children and adults alike. To my knowledge, no …

Phenology Of A Southern Population Of Mountain Pine Beetle (Dendroctonus Ponderosae), Anne Elise Mcmanis

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Mountain pine beetle (Dendroctonus ponderosae, Hopkins) is a major disturbance agent in pine ecosystems of western North America. Adaptation to local climates has resulted in primarily univoltine (one generation per year) generation timing across a thermally diverse latitudinal gradient. We hypothesized that this pattern in total development time is shaped by selection for slower developmental rates, altered developmental thresholds, or oviposition rates in southern populations inhabiting warmer climates. To investigate traits responsible for latitudinal differences we measured lifestage-specific development of southern mountain pine beetle eggs, larvae and pupae across a range of temperatures. We also describe and model …

Novel Treatments For Native Forb Restoration In The Great Basin, Adam J. Fund

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Public land management agencies, conservation organizations, and landowners are interested in expanding the diversity of plant species used in rangeland restoration seedings. While the restoration of native grasses and shrubs in the Great Basin has become increasingly successful, restoration of native forbs continues to be problematic. In the Great Basin, soil water availability and soil fungal pathogens are thought to limit to restoration success. During the course of two years, we conducted two field experiments at three sites in the Great Basin that spanned a latitudinal gradient encompassing different precipitation and temperature patterns.

In the first experiment, we evaluated two …

Learning Logic: A Mixed Methods Study To Examine The Effects Of Context Ordering On Reasoning About Conditionals, Christina W. Lommatsch

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Logical statements are prevalent in mathematics, the sciences, law, and many areas of everyday life. The most common logical statements are conditionals, which have the form “If H..., then C...,” where “H” is a hypothesis (or condition) to be satisfied and “C” is a conclusion to follow. Reasoning about conditionals is a skill that is only superficially understood by most individuals and depends on four main conditional contexts (e.g., intuitive, abstract, symbolic, or counterintuitive). The purpose of this study was to test a theory about the effects of context ordering on reasoning about conditionals. To test the theory, the researcher …

Characterization Of Black Walnut Genotypes For Resistance To Thousand Cankers Disease, Frost Hardiness And Other Desirable Horticultural Traits, J. Elisa Lauritzen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The black walnut, Juglans nigra L., is native to the United States (USA) and is a valuable timber and nut tree. Just before the beginning of the 21st century, several western states observed a decline in the health and, later, death of black walnut trees. The pathogen-vector complex now known as thousand cankers disease (TCD) was shown to be the cause. The disease, caused by Geosmithia morbida Kolařik, is vectored by the walnut twig beetle (WTB), Pityophthorus juglandis Blackman. Thousands of WTB will swarm and enter a tree vectoring the fungus at each entry point where cankers then develop, quickly …

Changing Nonhuman Impulsive Choice, C. Renee Renda

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Preference for smaller-sooner over larger-later rewards characterizes one type of impulsivity—impulsive choice. Impulsive choice is related to a number of maladaptive behaviors including substance abuse, pathological gambling, and poor health behaviors. As such, interventions designed to reduce impulsive choice may have therapeutic benefits. The purpose of this dissertation was to explore two methods to change nonhuman impulsive choice. In doing so, we hope to provide a baseline that future research can use to assess variables that are less amenable to human research (e.g., drug self-administration following reductions in impulsive choice). In Chapter 2, we failed to reduce nonhuman impulsive choice …

Characterization Of Lactose Fatty Acid Esters For Their Microbial Growth Inhibitory Activity And Emulsification Properties, Seung-Min Lee

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Sugar esters, substances made from bonding fatty acid tails to a sugar head, can play a number of key roles in food systems from antimicrobial agents to emulsifiers. These unique and very useful properties result from their water-loving and water-avoiding ends. Lactose, a sugar found in milk, based esters are important, as they are environmentally friendly and inexpensive, however, they are not very well understood. I created four different types of lactose esters: lactose monooctanoate (LMO), lactose monodecanoate (LMD), lactose monolaurate (LML) and lactose monomyristate (LMM), and then compared them to each other to see which would be the best …