Digital Commons Network^™

Oxidative Stress Responses And Nutrient Starvation In Mchm Treated Saccharomyces Cerevisiae, Michael C. Ayers, Zachary N. Sherman, Jennifer E. G. Gallagher

Faculty & Staff Scholarship

In 2014, the coal cleaning chemical 4-methylcyclohexane methanol (MCHM) spilled into the water supply for 300,000 West Virginians. Initial toxicology tests showed relatively mild results, but the underlying effects on cellular biology were underexplored. Treated wildtype yeast cells grew poorly, but there was only a small decrease in cell viability. Cell cycle analysis revealed an absence of cells in S phase within thirty minutes of treatment. Cells accumulated in G1 over a six-hour time course, indicating arrest instead of death. A genetic screen of the haploid knockout collection revealed 329 high confidence genes required for optimal growth in MCHM. These …

Analysis Of Land Use Change: Theoretical And Modeling Approaches, Helen Briassoulis

Web Book of Regional Science

This Web Book provides information on basic concepts and trends in land use change, and then reviews the state of the art in land use theory and empirical modeling. It concludes by summarizing the main issues pertaining to theories and models of land use change, discusses selected issues in of a more general concern in the context of the analysis of land use change and outlines future research directions.

Regional Impact Models, William A. Schaffer

Web Book of Regional Science

This survey of regional input-output models and their use in impact analysis evolved from over twenty years of experience in constructing regional economic models and in teaching about them. Its objectives are to present this family of models in an easily understood format, to show that the models we use in economics are well-structured, and to provide a basis for understanding applications of these models in impact analysis. The models are presented in such a way that understanding the logic and algebra of the simplest economic-base model leads to an understanding of the only slightly more complex regional and interregional …

Key Concepts In Sustainable Development, William Grunkemeyer, Myra Moss

Web Book of Regional Science

The question we are concerned with in this document is whether sustainable development can be a community wide priority and behavior that expands, and perhaps even at times replaces, existing priorities and behaviors. The materials contained in this document are intended to help both those entering the sustainability discussion and those with a rich history of implementing sustainable activities to consider ways traditional development leadership can be integrated into current sustainable development efforts. Included in our effort to encourage this integration is a history of the sustainable development concept, a review and discussion regarding the actual definition of sustainability, a …

2020 Symposium Brochure

Programs

No abstract provided.

Dispelling The Myths About Open Access: Making Informed Choices About Open Access Publishing Opportunities, Susan Arnold

2020 Library Immersion Program for Graduate Students

This workshop will discuss open access vs. traditional publishing venues and will include a section about predatory publishers' practices. Resources that are available to help find appropriate journals in which to publish will be demonstrated, and WVU Libraries' sources of assistance for open access publishing will be outlined.

Localized Cytokine Responses To Total Knee Arthroplasty And Total Knee Revision Complications, Nicole Prince, Julia A. Penatzer, Matthew J. Dietz, Jonathan W. Boyd

Faculty & Staff Scholarship

Background

The study of localized immune-related factors has proven beneficial for a variety of conditions, and one area of interest in the field of orthopaedics is the impact of implants and localized infections on immune response. Several cytokines have shown increased systemic concentrations (in serum/plasma) in response to implants and infection, but tissue-level cytokines have not been investigated as thoroughly.

Methods

This exploratory study investigated tissue-level cytokines in a cohort of patients (N = 17) in response to total knee arthroplasty and total knee revision to better understand the immune response to implants and localized infection (e.g., prosthetic joint infection). …

The United Postal Service—The One Word That Makes All The Difference, Jena Martin, Matthew Titolo

Law Faculty Scholarship

In recent months, the United States Postal Service (USPS) has taken center stage on a number of intersecting issues in our society: the pandemic; the upcoming election (through mail-in voting) and the controversy surrounding the appointment of Louis DeJoy to the position of Postmaster General. President Donald Trump has frequently made derogatory remarks regarding the Postal Service, calling it a “joke,” and has made repeated statements encouraging its privatization. However, President Trump’s rhetoric (as well as the rhetoric of others before him) obfuscates the critical mission of the USPS – to provide service to every American in the country; not …

Household Water Security: An Analysis Of Water Affect In The Context Of Hydraulic Fracturing In West Virginia, Appalachia, Bethani Turley, Martina Angela Caretta

Faculty & Staff Scholarship

Hydraulic fracturing has been booming in the last decade in the United States. While natural gas extraction and production has improved the national energy security, it has raised questions around the water security of those communities where extraction is taking place. Both scientists and residents are concerned about hydraulic fracturing’s impacts on surface- and groundwater, especially regarding how hydraulic fracturing impacts residents’ access to safe household well water. In the past decade, the Marcellus Shale has been developed in Northwestern West Virginia, yet the human geography dimensions of oil and gas extraction in West Virginia remain to be investigated. This …

Blood Substitution Therapy Rescues The Brain Of Mice From Ischemic Damage, Xuefang Ren, Heng Hu, Imran Farooqi, James W. Simpkins

Faculty & Staff Scholarship

Acute stroke causes complex, pathological, and systemic responses that have not been treatable by any single medication. In this study, using a murine transient middle cerebral artery occlusion stroke model, a novel therapeutic strategy is proposed, where blood replacement (BR) robustly reduces infarctions and improves neurological deficits in mice. Our analyses of immune cell subsets suggest that BR therapy substantially decreases neutrophils in blood following a stroke. Electrochemiluminescence detection demonstrates that BR therapy reduces cytokine storm in plasma and ELISA demonstrates reduced levels of matrix metalloproteinase-9 (MMP-9) in the plasma and brains at different time points post-stroke. Further, we have …

Accessing The Functional Capabilities Of The Tick Microbiome Through Metagenomics, Darin Lee Shrewsberry Jr

Graduate Theses, Dissertations, and Problem Reports (ETD)

The black-legged tick Ixodes scapularis is a common ectoparasite of animals and an obligate blood feeder, attaching to a host animal and taking a blood meal once per life stage (i.e. 3 times during its life). Unfortunately for the tick, blood represents a nutrient poor diet largely consisting of lipids and proteins but notably lacking in essential nutrients such a B vitamins (e.g., biotin, riboflavin, niacin) Other exclusive blood feeders such as the tsetse fly harbor symbiotic bacteria that provision B-complex vitamins to their host. I. scapularis harbors Rickettsia buchneri an endoparasitic bacterium that intriguingly possesses two copies of a …

In Vitro Assessment Of Deleterious Impacts Of Organomodified Nanoclays And Their Incinerated Byproducts On Human Cells, Andrew Philip White

Graduate Theses, Dissertations, and Problem Reports (ETD)

Organomodified nanoclays (ONCs: i.e., smectite clays with different organic coatings), act as nanofillers in applications ranging from automotive, to aerospace, and biomedical implementations. Because of their large utilization, ONC industry is projected to be a U.S. $3.3 billion industry by 2023. However, emerging studies showed that ONCs and ONC-nanocomposites could harbor health risks upon pulmonary exposure and along their life cycle, namely during synthesis, handling, use, manipulation, and disposal. Specifically, the potential for exposure and adverse effects on human health primarily includes release of dry particulate during handling, manipulation, release during use, and release during the end-of-life disposal or recycling …

Trees, Fungi, Insects: How Host Plant Genetics Builds A Community, Sandra Jeanne Simon

Graduate Theses, Dissertations, and Problem Reports (ETD)

Organisms, such as fungi and insects, can cause millions of acres of agricultural and forest damage, while others provide billions of dollars in ecological services such as education, aesthetic enjoyment, pollination, and gardening. Plant breeding and biotechnology can potentially help establish a balance between the proliferation of detrimental pests and attraction of beneficial insects. Variation in plant physiological and morphological characteristics are extremely important in the ability of host tissues to support many different types of organisms. When that variation is genetically heritable in a plant population, shifts in the underlying genes can have predictable consequences in structuring entire ecosystems. …

The Role Of Genotype In Saccharomyces Cerevisiae Resistance To 4-Methylcyclohexanemethanol, Michael C. Ayers

Graduate Theses, Dissertations, and Problem Reports (ETD)

The chemical 4-methylcyclohexanemethanol (MCHM) spilled in the Elk River near Charleston, WV in January 2014, impacting the drinking water of 300,000 residents. Initial studies on MCHM following the spill attempted to characterize its toxicological effects in animals, but largely ignored characterization of its effects on cellular pathways and metabolism. In this study, I used this chemical as a novel stressor for the model eukaryote S. cerevisiae to explore the relationship of genotype and stress phenotypes. Initial exploration characterized the stress phenotype of MCHM in yeast through growth assays, cell cycle analysis, and transcriptomic data. MCHM exposure caused cells to arrest …

Targeting The Nt17 Of The Huntingtin Protein Via Natural And Chemical Modifications: Impact On Aggregation And Membrane Interactions, Faezeh Sedighi

Graduate Theses, Dissertations, and Problem Reports (ETD)

Huntington Disease (HD) is a fatal neurodegenerative disorder caused by an expanded polyglutamine domain (polyQ) in the first exon of the huntingtin protein (htt-exon1). The major hallmark of HD is the accumulation of aggregates into proteinaceous inclusion bodies. PolyQ expansion in huntingtin promotes self-assembly into a variety of toxic aggregates such as oligomers, fibrils, and amorphous aggregates. The resulting heterogeneous mixture of distinct species makes it difficult to assign a toxic function to specific aggregate structures. In addition, htt interacts with a variety of membranous surfaces. The first 17 amino acids (Nt17) of htt directly flanking the polyQ domain functions …

The Interplay Of Progestins, Matrix Metalloproteinases, And The Aging Brain, Keyana Nicole Porter

Graduate Theses, Dissertations, and Problem Reports (ETD)

Progestins are synthetic hormones that are designed to mimic the biological actions of progesterone. They, however, possess other pharmacological actions and properties, in addition to their progestational activities. Medroxyprogesterone Acetate (MPA) is a progestin used globally in the hormonal contraceptive, Depo Provera®, by women in their reproductive prime and is a major compound found in hormone therapy (HT) formulations used by menopausal women. MPA is used by approximately 1 in 5 adolescents and adult women in the United States who are sexually active. Globally, nearly 48 million women utilize injectable contraceptives to prevent pregnancy, with most users utilizing MPA as …

Obese Zucker Rats As A Reverse Translational Model Of Human Left Ventricular Hypertrophy, Mackenzie Shelby Newman

Graduate Theses, Dissertations, and Problem Reports (ETD)

Heart failure is a lifelong disability that for over half of those affected leads to mortality within five years after initial diagnosis. Left ventricular hypertrophy (LVH) is one of the most reliable independent predictors of heart failure. Pathological LVH is irreversible, but early diagnosis is often missed due to its asymptomatic nature. Obese Zucker rats (OZR), which develop obesity due to dysfunctional leptin signaling, naturally exhibit a LVH that mimics the obese human condition. Animal models are necessary because human donor tissue is scarce. The central hypothesis is that genes and proteins that are differentially expressed during development of LVH, …

Association Of Diet Quality With Fall Risk Among Community-Dwelling Older Adults In A Fall-Prevention Program, Jae Hyun Kim

Graduate Theses, Dissertations, and Problem Reports (ETD)

Falls are a serious threat to older adults' quality of life. Evidence is lacking regarding the influence of diet on fall risk factors. This study aims to assess the relationship between diet, functional measures, and fall risk among older adults participating in a fall-prevention intervention. Cross-sectional analysis of baseline data from 192 participants with an average age of 70.9 years was conducted using Chi-square tests, t-test, Wilcoxon test, and nominal logistic analysis. Based on Dietary Screening Tool (DST) scores, 39.5% of participants were classified as nutritionally being “at-risk,” 46.1% were at “possible-risk,” and 14.4% were “not-at-risk.” Fall risk was assessed …

Effect Of Sire Breed On Grass-Based Lamb Production, Camren L. Maierle

Graduate Theses, Dissertations, and Problem Reports (ETD)

Improvement of lamb performance in low-input operations may prove vital for the sustainability of eastern US sheep production. Maintaining growth while improving carcass conformation using terminal sire crossbreeding systems may increase value in a pasture-based system. Therefore, the aim of this study was to compare effects of terminal sire breed on parasitism, growth, marketability of grazing lambs. Suffolk (SU; n = 2) and Texel (TX; n = 2) sires were mated to commercial ewes at the WVU Organic Farm. April-born lambs were managed on pasture as one group until weaning (mid-June), then were separated into 3 replicates per sire breed. …

Vulnerability Of High-Elevation Endemic Salamanders To Climate Change: A Case Study With The Cow Knob Salamander (Plethodon Punctatus), Carl D. Jacobsen, Donald J. Brown, William D. Flint, Thomas K. Pauley, Kurt A. Buhlmann, Joseph C. Mitchell

Faculty & Staff Scholarship

Rapid contemporary climate change is a potential threat to long-term persistence of montane wildlife species because they often have narrow thermal tolerances and have limited potential to shift their distributions. The Appalachian Mountain region in the eastern United States is a global biodiversity hotspot for woodland salamanders (genus Plethodon), many of which are high-elevation endemic species. Robust assessments of the vulnerability of high-elevation endemic salamanders to climate change, including delineation of future potential climate refugia, are needed to guide climate change adaptations strategies. The Cow Knob Salamander (Plethodon punctatus) is a species of conservation concern found at …

Breastfeeding Duration Is Associated With Regional, But Not Global, Differences In White Matter Tracts, Christopher E. Bauer, James W. Lewis, Julie Julie Brefczynski-Lewis, Chris Frum, Margeaux M. Schade, Marc W. Haut, Hawley E. Montgomery-Downs

Faculty & Staff Scholarship

Extended breastfeeding through infancy confers benefits on neurocognitive performance and intelligence tests, though few have examined the biological basis of these effects. To investigate correlations with breastfeeding, we examined the major white matter tracts in 4–8 year-old children using diffusion tensor imaging and volumetric measurements of the corpus callosum. We found a significant correlation between the duration of infant breastfeeding and fractional anisotropy scores in left-lateralized white matter tracts, including the left superior longitudinal fasciculus and left angular bundle, which is indicative of greater intrahemispheric connectivity. However, in contrast to expectations from earlier studies, no correlations were observed with corpus …

The Transition From Planar To En Echelon Morphology In A Single Vein In Shale: Insights From X-Ray Computed Tomography Scanning, Graham Dm Andrews, Sarah R. Brown, Johnathan Moore, Dustin Crandall, Paige Mackey

Faculty & Staff Scholarship

En echelon fractures and veins are among the most common and distinctive geological structures, yet their three-dimensional forms and relationships to surrounding structures are commonly unclear. X-ray computed tomography (CT) offers an unrivaled ability to examine structures within rocks in three dimensions, and it is applied here to a sample of drill core from the Marcellus Shale of southwestern Pennsylvania (USA). CT images yield qualitative and quantitative data on the transition from a pyrite-rich planar vein to an en echelon veinlet array, and on the heterogeneity of veinlets within the array. Using a combination of three- and two-dimensional images, geometric …

Light Interception And Growth In Pastures Under Ideal And Stressful Conditions On The Allegheny Plateau, Edward Barrow Rayburn

Faculty & Staff Scholarship

No abstract provided.

Comparative Study Of The Fife And Drum Blues Traditions Of Othar Turner And The Preservation, Development, And Innovation Of Sharde Thomas And The Rising Stars Fife And Drum Band, Donnie Ryan Jobe

Graduate Theses, Dissertations, and Problem Reports (ETD)

Othar Turner held the Fife and Drum Blues traditions of North Mississippi for decades. Since his passing in 2003, his granddaughter Sharde Thomas has taken over as the keeper of these traditions. The musical characteristics of Othar are still present in Sharde’s music today, however her interpretations have shaped these current traditions. This research discusses heritage and folklore theories of scholars Rodney Harrison, Martha Sims, and Martine Stephens as a lens to evaluate Sharde’s musical interpretations and compares them to Othar’s last recordings before his passing. This document provides a model for how these musical characteristics and interpretations relate and …

An Interactive Mobile Equipment Task-Training With Virtual Reality, Lazar Zujovic

Graduate Theses, Dissertations, and Problem Reports (ETD)

Improving the quality of equipment training for the Heavy Equipment Operators (HEO) is a critical task in the ever-lasting effort to improve safety and eliminate equipment-related injuries in mining environments. Traditional miner training includes the use of hardcopy documents and video instructions. However, modern mobile and computer technology offers tremendous potential to improve the training process. One major responsibility for the heavy-machine operators is proper machine inspection. Establishing new training methods that utilize modern technologies—such as 360-degree images, videos, and Virtual Reality—and implementing computers for training purposes have a potential to help new operators learn how to conduct proper machine …

Advancing Quantitative Understanding Of Escherichia Coli Concentrations In A Contemporary Mixed Land-Use Watershed, In West Virginia, Usa, Fritz Petersen

Graduate Theses, Dissertations, and Problem Reports (ETD)

A scarcity of field-based research investigating the relationships between E. coli (fecal matter) concentration, suspended particulate matter (SPM; including size distribution), physicochemical parameters (water temperature, pH, SPC, DO, chloride) and land use practices and the importance of these relationships, particularly for human health, policy makers, and water resource managers, provided the impetus for this research. A 22-site, nested-scale, experimental watershed study design was implemented to investigate E. coli concentrations and the aforementioned relationships in a contemporary mixed land use watershed in the Appalachian region of the eastern United States. Results from a reduced (n=4 sites) study showed SPM in the …

The Role Of High-Fat Diets In Exacerbating Cognitive Deficits After Traumatic Brain Injury, Michelle A. Frankot

Graduate Theses, Dissertations, and Problem Reports (ETD)

Traumatic brain injury (TBI) can cause chronic psychiatric-like impairments that may be driven by inflammation in the brain. In the current study, inflammation was upregulated using a high-fat diet (HFD) to assess the role of inflammation in TBI-induced deficits. Rats were randomly assigned to receive an HFD or calorie-matched low-fat diet (LFD) for the duration of the experiment. After two weeks of free access to their respective diets, rats began behavioral training on the Rodent Gambling Task (RGT), during which they were allowed to freely choose to nosepoke in one of four holes in a standard operant chamber. Responses in …

Evaluating The Use Of The M-Vac® Wet Vacuum System To Recover Dna From Cotton Fabric, Phillip Reilly Irion

Graduate Theses, Dissertations, and Problem Reports (ETD)

With the current state of the field of forensic biology, collecting DNA from evidence samples may pose some difficulty. Traditional methods for collection of DNA from biological fluids and touch samples include cuttings, scrapings, and the double swab method. While all of these methods have benefits, they also have their drawbacks. In order to more efficiently collect DNA from an evidence sample, novel approaches need to be explored. This novel approach is the microbial vacuum (M-Vac®) Wet Vacuum System.

This system utilizes a sterile collection solution and a vacuum to collect DNA material from evidence samples. While it is similar …

Making Space For Writing: Makerspace Activities And Academic Language In A Middle School Science Classroom, Ashley Stewart

Graduate Theses, Dissertations, and Problem Reports (ETD)

Over recent decades, the maker movement has expanded from the private sector, libraries, and higher education institutions to K-12 schools. While many studies provide implications of STEM and maker activities and their effects on learning in informal settings, few have framed such investigations within the context of a makerspace in K-12 schools. Furthermore, few have investigated maker activities and writing, particularly in developing academic language features. Prior research suggests that secondary students struggle to apply academic language features. Meanwhile, they are motivated to engage in STEM and maker activities. This mixed methods case study attempted to make a connection between …

Effect Of Western Diet And Caloric Substitution With Apple Pomace On Fatty Acid Composition And Gene Expression In The Hypothalamus Of Growing Female Sprague-Dawley Rats, Ayad Abdulhamid Alawadi

Graduate Theses, Dissertations, and Problem Reports (ETD)

The hypothalamus plays a major role in regulating food-intake and energy-expenditure. Hypothalamic dysfunction implicated in neurodegenerative diseases is characterized by diet-induced neuroinflammation and energy dysregulation. Apple pomace, a waste byproduct of processing, is rich in polyphenols and soluble fibers, has the potential to ameliorate diet-inducing inflammation. The objective of this study was to determine the effects of Western diet and caloric substitution of Western diet with 10% apple pomace on brain fatty acid composition and gene expression related to hypothalamic function and health in growing female rats. Growing female Sprague-Dawley rats (age 22-29 days) were randomly assigned (n=8 rats/group) to …