Digital Commons Network^™

Malivhu: A Comprehensive Bioinformatics Resource For Filtering Sars And Mers Virus Proteins By Their Classification, Family And Species, And Prediction Of Their Interactions Against Human Proteins, David Guevara-Barrientos, Rakesh Kaundal

Computer Science Student Research

COVID 19 pandemic is still ongoing, having taken more than 6 million human lives with it, and it seems that the world will have to learn how to live with the virus around. In consequence, there is a need to develop different treatments against it, not only with vaccines, but also new medicines. To do this, human-virus protein-protein interactions (PPIs) play a key part in drug-target discovery, but finding them experimentally can be either costly or sometimes unreliable. Therefore, computational methods arose as a powerful alternative to predict these interactions, reducing costs and helping researchers confirm only certain interactions instead …

Simulating The Long-Term Response Of Forest Succession To Climate Change In The Boreal Forest Of Northern Ontario, Canada, Guy R. Larocque, F. Wayne Bell, Eric B. Searle, Stephen J. Mayor, Thomas Schiks, Parvin Kalantari

Aspen Bibliography

The effect of climate change on forest dynamics is likely to increase in importance in the forthcoming decades. For this reason, it is essential to predict the extent to which changes in temperature, precipitation, and atmospheric CO₂ might affect the development of forest ecosystems and successional pathways. The gap model ZELIG-CFS was used to simulate the potential long-term effects of climate change on species-specific annual change in mean basal area and stand density under two scenarios of representative concentration pathways (RCP), 4.5 and 8.5, for the boreal forest region of Ontario, Canada, where mean temperature, precipitation, and atmospheric CO …

Assimilating Satellite-Derived Snow Cover And Albedo Data To Improve 3-D Weather And Photochemical Models, Colleen Jones, Huy Tran, Trang Tran, Seth Lyman

Chemistry and Biochemistry Faculty Publications

During wintertime temperature inversion episodes, ozone in the Uinta Basin sometimes exceeds the standard of 70 ppb set by the US Environmental Protection Agency. Since ozone formation depends on sunlight, and less sunlight is available during winter, wintertime ozone can only form if snow cover and albedo are high. Researchers have encountered difficulties replicating high albedo values in 3-D weather and photochemical transport model simulations for winter episodes. In this study, a process to assimilate MODIS satellite data into WRF and CAMx models was developed, streamlined, and tested to demonstrate the impacts of data assimilation on the models’ performance. Improvements …

Cognitive Reappraisal: The Bridge Between Cognitive Load And Emotion, Rebecca Brockbank, David F. Feldon

Instructional Technology and Learning Sciences Faculty Publications

Within this integrative review, cognitive load theory (CLT) is asserted as a powerful framework for conceptualizing human cognitive processes within learning. The relationship between cognition and emotion is then examined and further integrated within the scope of CLT. Emotion regulation strategies are discussed and adaptive strategies are proposed as being of particular relevance to broadening the theoretical and practical impacts of CLT. Central to the argument of this review is the use of cognitive reappraisal as a potential mitigator of cognitive load. Cognitive reappraisal involves reframing or reassessing understandings or beliefs that underlie an emotional response, which may mitigate cognitive …

Body Length Determines Flow Refuging For Rainbow Trout (Oncorhynchus Mykiss) Behind Wing Dams, Terry R. Dial, Laura A. Collins, James C. Liao, Bret W. Tobalske

Environment and Society Faculty Publications

Complex hydrodynamics abound in natural streams, yet the selective pressures these impose upon different size classes of fish are not well understood. Attached vortices are produced by relatively large objects that block freestream flow, which fish routinely utilize for flow refuging. To test how flow refuging and the potential harvesting of energy (as seen in Kármán gaiting) varies across size classes in rainbow trout (Oncorhynchus mykiss; fingerling, 8 cm; parr, 14 cm; adult, 21 cm; n = 4 per size class), we used a water flume (4,100 L; freestream flow at 65 cm s^-1) and created …

Neuromorphic Star Tracking Using Monte Carlo Localization, Connor Gisburne, Alex Warren, Steven Allen, Michael Bantel, Justin James

Small Satellite Conference

Accurate attitude determination ensures precise payload sensor alignment and optimal solar panel positioning, enhancing data collection and power efficiency while ensuring stable orbit maintenance. The most accurate method of attitude determination is star tracking. Star trackers collect an image of a star field and utilize a catalog of known star positions to calculate the orientation of the system relative to the stars. The errors present in this method of attitude determination tend to be on the order of ten arcseconds or less. Using traditional collection techniques, attitude estimates can be provided at update rates of 1 to 10 Hz and …

The Bosuns Locker: A Universal Payload Enclosure For In Space Manufacturing & Robotic Assembly In Space, Noah Gladden, Rahul Rughani, Dave Barnhart

Small Satellite Conference

Arkisys is dedicated to enabling payloads to reach LEO that don't have a free-flying requirement. Our unique Port Module is an autonomous long-duration modular orbital platform designed to host payloads and servicing technologies in any orbit with a simple process, with the first roll-out in LEO. It will enable our customers to qualify and test their hardware in orbit in less than 90 days!

Biosentinel: Leading The Way For Deep Space Cubesat Missions, Jeff Homan, Matthew Napoli, Cheryle Kong, Jesse Fusco, Robert Nakamura

Small Satellite Conference

BioSentinel, a 6U spacecraft launched on Artemis-I in November 2022, is one of the longest operating CubeSats beyond cislunar space. The successful subsystem design with COTS components has become a template for future deep space missions, and the lessons learned from over a year and a half of operations enable their improved performance.

A Compact High-Resolution Ion & Neutral Time-Of-Flight Mass Spectrometer For Advanced Space Applications, Lucas Anderson, Chad Fish, Gregory Miller, Ryan Blase

Small Satellite Conference

We present the design, development, and testing of four novel, compact, high-precision Time-Of-Flight (TOF) Mass Spectrometers (MS) for integration with the next generation of space flight platforms. These MS instruments are capable of sampling both ions and neutral elements and are designed to integrate with a variety of space flight vehicles, including sounding rockets and small satellites (ESPA & 12U CubeSats or larger). One of the four flight instruments has been prototyped as a sounding rocket payload with a SWAP of approximately ~8 kg, and ~15 W using a 12-bit 3.2Gs/s analog-to-digital converter data acquisition system (With a Time to …

A ‘Nuclear Bomb’ Or Just ‘A Joke’? Groundwater Models May Help Communicate Nuanced Risks To The Great Salt Lake, Matthew D. Laplante, Piyush Dahal, Shih-Yu Simon Wang, Kirsti Hakala, Avik Mukherjee

Plants, Soils, and Climate Faculty Publications

The Great Salt Lake entered the zeitgeist of environmental concern in 2022 when a coalition of scientists and activists warned in a highly publicized report that the lake might be just five years away from complete desiccation, a possibility one state official warned was tantamount to an “environmental nuclear bomb”. Shortly thereafter, an unpredicted and unprecedented pluvial winter resulted in an increase in inflow, temporarily halting the lake’s decline and prompting Utah’s governor to mock the dire prediction as “a joke”, an outcome that speaks to the tension between agenda-setting and trust-building that researchers face when sharing worst-case warnings, particularly …

Modelling Climate Effects On Site Productivity And Developing Site Index Conversion Equations For Jack Pine And Trembling Aspen Mixed Stands, Mahadev Sharma

Aspen Bibliography

Forest site productivity estimates are crucial for making informed forest resource management decisions.These estimates are valuable both for the tree species currently growing in the stands and for those being considered for future stands. Current models are generally designed for pure stands and do not account for the influence of climate on tree growth. Consequently, site index (SI) conversion equations were developed specifically for jack pine (Pinus banksiana Lamb.) and trembling aspen (Populus tremuloides Michx.) trees grown in naturally originated mixed stands. This work involved sampling 186 trees (93 of each species) from 31 even-aged mixed stands (3 …

Te Pūnaha Ātea -1 (Tpa-1), A Capability Development And Validation Mission From New Zealand, Ben Taylor, Vernon Lewis, Jason Shore, Mahima Seth, Annalisa Tresoldi, Mattia Longato, Guglielmo Aglietti, Chris Jackson

Small Satellite Conference

We report an overview of the Te Pūnaha Ātea -1 (TPA-1) 3U CubeSat and its payloads, which is manifested for an upcoming launch. Within the context of the New Zealand space sector, the mission is aimed at developing and validating capability in mission delivery and operations through in-house processes and infrastructure. The mission includes four payloads comprising: a deployable/stowable inspection boom, an integrated Raspberry Pi based Earth observation and deployables imager, thermal monitoring payload and miniaturised dragsail for end-of-life disposal. The first mission by Te Pūnaha Ātea - Space Institute represents an important step along the path to becoming the …

Harnessing Cubesat Technology For Precision Pesticide Management In Egyptian Agriculture, Motaz El Sayed, Salem Abdou, Abdelhamid Sherif

Small Satellite Conference

This paper presents the development of an autonomous spraying robot designed to optimize agricultural practices through precise pesticide application, facilitated by the integration of real-time satellite data. The robot utilizes multispectral imaging from satellites, including NDVI and thermal data, to assess crop health and identify specific needs for intervention. The system aims to significantly reduce the volume of chemicals used in farming by targeting only the areas that require treatment, thus minimizing environmental impact while maintaining or enhancing crop yield. By employing advanced algorithms for data processing and machine operation, the robot autonomously navigates through fields, delivering pesticides in an …

A Systematic Review Of The Prevalence Of Late Identified Hearing Loss In Childhood, Karen Muñoz, Dylan Chan, Donald Goldberg, Diana Ortiz, Valerie James Abbott, Karl White

Communicative Disorders and Deaf Education Faculty Publications

Objectives

The objective of this systematic review was to assess the evidence about the prevalence of permanent hearing loss for children not identified from newborn hearing screening (NHS).

Design

Articles were grouped into three categories based on the methodological approach: (1) all participants received diagnostic testing, (2) otoacoustic emission (OAE) or pure tone screening was completed and those not passing were referred for a diagnostic test, and (3) data were retrieved from archival records. Study characteristics, prevalence, and contextual factors were synthesised and narratively described.

Study Sample

30 peer-reviewed articles.

Results

Prevalence of permanent hearing loss per 1,000 children ranged …

Tremblings, August 2024, Western Aspen Alliance

Tremblings

Function over form: the benefits of aspen for Greater Sage-grouse

Michel T. Kohl, Associate Professor of Wildlife Management and Wildlife Extension Specialist, University of Georgia

David Dahlgren, Associate Professor and Rangeland Wildlife Extension Specialist, Utah State University

Sage-grouse, and their elaborate springtime breeding displays, are an icon of Western landscapes. Yet, sage-grouse (a sagebrush obligate species) have been facing decades-long declines due to the loss of habitat. Historically, the species ranged across 13 western states and two Canadian provinces. Today, they occur across < 50% of that range, and abundance has declined 80% since 1965 and almost 40% since 2002. Despite this, it was determined in 2015 that the sage-grouse did not warrant Endangered Species protection due to the strength of wide-spread collaborative conservation actions.

Evaluating The Cost Of Gain And Financial Returns Of Cattle Fed Hydroponically Produced Barley Fodder, Lex Peterson

All Graduate Reports and Creative Projects, Fall 2023 to Present

Hydroponically produced fodder continues to garner attention as a feed source within livestock production. This attention in part is due to a belief that hydroponically produced fodder is more efficient in its use of inputs such as water when compared to conventional feeds. Water efficiency is especially appealing in areas like the Intermountain West region of the U.S where water availability is often constrained. This analysis looks to understand how using hydroponically produced barley fodder to finish steers compares economically to finishing steers on a nutritionally equivalent conventional finishing ration. To do so, a stochastic simulation model is constructed to …

Sustainable Waste-To-Bioproducts Engineering Center Laboratory Safety Project, Claudine Mock

All Graduate Reports and Creative Projects, Fall 2023 to Present

Laboratory accidents are common in teaching and research labs; these accidents can be injurious or even fatal. The consequences of each type of laboratory accident are different based on the activities performed and the hazardous materials used in each facility. However, the most common issue related to laboratory accidents is the lack of proper safety measures (e.g., poor handling of hazardous materials, not reporting incidents immediately, etc.). This project aimed to establish and strengthen best practices and procedures to ensure laboratory safety at the Utah State University Sustainable Waste-to-Bioproducts Engineering Center. To achieve this goal, different practices and measures were …

Balancing The Scales: Evaluating Variables Of Greatest Impact To Profit Margins When Finishing Cattle, Ryan Bake

All Graduate Reports and Creative Projects, Fall 2023 to Present

This study examines the risk associated with finishing cattle in a feedlot, specifically in the context of historically high cattle prices and quality grade grid marketing systems that have not adjusted to these elevated prices. The analysis also looks at performance factors that drive profitability differences in pens of cattle in a commercial feedlot, and how market factors also impact profitability. Regression analysis determines the significance of performance variables such as days on feed, average daily gain, feed conversion rates, and carcass characteristics on pen profitability. The impact of cattle breeding and pre-feedlot management of the cattle are also considered …

Legend Trips And Vernacular Film Theory: Spooky Encounters In Tiktok Mediated Legend Trips, Drew Holley

All Graduate Reports and Creative Projects, Fall 2023 to Present

In this thesis I looked at how legend tripping is mediated through the affordances of new social technologies and apps, specifically TikTok. Short video formats allowed for folk cinematography to spread legend narratives and at the same time create more visual online landscapes for people to interact with. I defined folk cinematography as the way in which people make videos based on a vernacular level. This has been based on people having more access to video making tools and learning from informal patterns such as trends on sites like TikTok. Because of this, I explored how audiences participate in a …

Tales In The Teeth: Using Isotopic Analysis To Understand The Paleoecology And Social Behavior Of Brontotheres Of The Intermountain Basins During The Middle Eocene, John Michael Michalski

All Graduate Reports and Creative Projects, Fall 2023 to Present

Isotopic analysis has been a common practice used in paleontology to study ancient ecosystems, and the lives of animals therein. Oxygen isotopic analysis is of particular importance not only because of its use in studying paleoecology, diet, and migration, but also its use in studying mountain elevation, and its impact on ancient ecosystems. I use stable oxygen isotopic analysis to study the habits and ecology of brontotheres from intermountain basins surrounding the Uinta Mountains of Utah and Wyoming, USA. I studied the oxygen isotopes from 16 fossil specimens of teeth, most of which belonged to brontotheres, including the genera Palaeosyops …

Developing Educational Tools For Sustainable Stormwater Management, Lauren Houskeeper

All Graduate Reports and Creative Projects, Fall 2023 to Present

Rapid population growth and development in Western states are exerting strain on the region’s limited water resources. Urbanization exacerbates this issue by increasing impervious surfaces, limiting infiltration of precipitation during storm events and snowmelt, which results in changes to hydrologic conditions with higher runoff volumes and higher peak flows. Stormwater transports pollutants as it flows across impervious surfaces, discharging high volumes of runoff and elevated loads of urban contaminants into receiving waters. The amount of pollution entering waterways continually increases as urban areas expand. Utah is currently experiencing a rapid transition from undeveloped to developed landscapes, necessitating the implementation of …

Shedding Light On Past Ice-Free Intervals In Northwest Greenland: Luminescence Dating Of The Base Of The Camp Century Ice Core, Hawke Woznick

All Graduate Theses and Dissertations, Fall 2023 to Present

The goal of this thesis is to provide greater resolution on the age and character of the subglacial sediment recovered from the base of the Camp Century ice core, northwestern Greenland. Geochemical analysis indicated that the upper sub-ice sediments were geochemically different and experienced greater weathering than the basal unit underlying a one-meter silty ice lens. Analysis of feldspars within the very fine sand fraction indicates they are dominated by potassium feldspar. Sediment was dated using luminescence, which provides an age for the last time sediment was exposed to light. Luminescence analysis returned ages around 420 thousand years old, which …

The Sustainable Sites Initiative As It Applies To Existing Parks In Logan Utah, Randall Smith

All Graduate Reports and Creative Projects, Fall 2023 to Present

The Intermountain West of the United States consists of a variety of climates and landscapes. Despite their diversity, all of these regions face similar issues, such as water shortage, lack of biodiversity, invasion of non-native plant species, land development, and population growth. The pursuit of sustainability has become imperative in order to meet the needs of the present, while simultaneously safeguarding the ability of future generations to meet their own needs. Many influential landscape architects have advocated for sustainable design; namely, Frederick Law Olmsted, Ian McHarg, and Laurie Olin. However, sustainability is used too often as a generic buzzword, diminishing …

Method Development For The Extraction And Analysis Of Per- And Polyfluoroalkyl Substances (Pfas) In Wastewater And Biosolids, Victoria Krull

All Graduate Theses and Dissertations, Fall 2023 to Present

Per and poly-fluorinated alkyl substances (PFAS) are manufactured chemicals that have water and grease repellant properties and do not readily biodegrade. PFAS are present in many consumer products and end up in waste systems and the environment. Studies have shown that PFAS can have adverse health effects on humans and animals.

There are many challenges to processing and analyzing samples containing PFAS including: adsorption of PFAS to equipment, contamination from equipment containing PFAS, and the high sensitivity needed to analyze for PFAS in the parts per trillion detection range. The United States Environmental Protection Agency (EPA) has been developing methods …

An Online Scientific Twitter World: Social Network Analysis Of #Sciencetwitter, #Scicomm, And #Academictwitter, Man Zhang

All Graduate Theses and Dissertations, Fall 2023 to Present

Understanding who makes up online social worlds as well as how information flows within those communities is important as more people access news, research topics, collaborate with others, and entertain themselves. This study identified and classified the people discussing scientific topics on Twitter, determined the type of social network, and described the member composition of this online world. Scientists, the public, and educators formed this online world. They built connections by initiating activities and interacting with others, which created the Community Clusters social network structure. All three categories of people are in positions of influence in this network leading and …

Birds, Bees, And The Babies: Study Of The Influence Of Self-Efficacy On Parent-Child Sex Communication, Cassandra M. Craig

All Graduate Theses and Dissertations, Fall 2023 to Present

Previous studies show that parents tend to be uncomfortable discussing sexual topics with their children, such as menstruation, masturbation, and/or condom use. This study offers a look at the part confidence plays in a parent's intentions to talk to their kids about such topics. The results indicated that the confidence parents feel about discussing sexual topics is not related to how much their own parents talked with them about sex. However, the confidence they feel that could be coming from other models, like social media or peers, is related to how much parents intend to talk with their own children …

Microbiome Assembly And Function In The Solitary Mason Bee, Osmia Lignaria (Megachilidae), Bailey Crowley

All Graduate Theses and Dissertations, Fall 2023 to Present

Animal-microbe interactions can influence host biology, ecology, and evolution. The assembly and function of microbes found within animal hosts oftentimes depends on which species are involved. Advances in sequencing technologies have permitted the exploration of host-microbe interactions in a variety of animals, including bees. Early research aimed at understanding the microbiomes of social bees, such as honey bees and bumble bees, found that microbes prevent the spoilage of stored pollen, breakdown indigestible nutrients into smaller molecules available for uptake by the host, and also protect the host from pathogens. When environmental stressors, such as increased temperatures, disrupt the microbiome, the …

Validating A Scale Of Psychological Flexibility And Inflexibility For Older Adolescents, Caleb Douglas Farley

All Graduate Theses and Dissertations, Fall 2023 to Present

Psychological flexibility (PF) is a skill that is related to various mental health experiences in adults. Higher levels of PF seem related to greater wellbeing. Given increases in mental health problems with youth, measuring PF and its inverse, psychological inflexibility (PI), might be useful for identifying those teenagers at risk for mental health challenges and referring them to appropriate interventions. To date, most measures of PF and PI are only available for adults older than 18, and, while theory suggests PF and PI are important for adolescent mental health, little research has examined the validity of these claims. This multipaper …

The Interactions Between Drought Tolerant Corn Hybrids And Plant Water-Stress On Weeds And Their Host Capability For Spider Mites, Mercy Adhiambo Odemba

All Graduate Theses and Dissertations, Fall 2023 to Present

With climate change, it is predicted that more frequent high temperatures and drought severity will lead to an increase in damage caused by pests that thrive under these conditions. Spider mite outbreaks, for example, are associated with plant waterstress and there is evidence that some weeds are more resilient and adapted to drought than some crops, leading to major concerns for the management of these two pest types. Weeds directly compete with crops for limited resources, but what is unclear is which weeds harbor spider mites and whether they exacerbate the impact of spider mites on corn crops under water-stressed …

California Condor Feeding Habitat, Vigilance, And Competition With Avian Scavengers In Southern Utah, Usa, Alex Blanche

All Graduate Theses and Dissertations, Fall 2023 to Present

Independent foraging is needed for the reintroduction of a species to be successful, but it can cause cascades in interconnected ecological communities. California condors (Gymnogyps californianus) were reintroduced to the Colorado Plateau in 1996, and the population has continued to grow with yearly releases of captive individuals. However, little is known about foraging behavior of condors and their potential competitors. Carrion is a risky food source, and there is a tradeoff between vigilance and feeding. Altering behavior can maximize caloric intake while minimizing risk. Here, I investigate habitat selection, vigilance, and interspecific interactions among condors, golden eagles ( …