Digital Commons Network^™

The Role Of Individual Specialization In Migration Phenology And How Restored Habits Are Used By Native And Nonnative Fishes, Austin Garner

All Graduate Theses and Dissertations, Fall 2023 to Present

Native fish species around the world have declined due to habitat loss, habitat fragmentation, and the spread of non-native species. Because these problems often happen at the same time and interact, recovery efforts can stall unless they address all of the factors limiting a species' comeback. The June sucker (Chasmistes liorus), native only to Utah Lake, UT, has declined for many of these reasons, though its recovery effort has made significant progress due in large part to a successful hatchery program. Yet, the recovery efforts have not yet been able to establish a self-sustaining population in Utah Lake, …

Investigation Of Yy Production Methods For Invasive Channel Catfish Ictalurus Punctatus Population Management, Andrew M. Wisniewski

All Graduate Theses and Dissertations, Fall 2023 to Present

Aquatic invasive species are one of the leading causes of native fish declines in the Southwestern United States. Channel Catfish Ictalurus punctatus were introduced into the Colorado River Basin, including the San Juan River, New Mexico, Colorado, and Utah for fishery enhancement during the 20th century. This introduction has contributed to the decline of native species and despite intensive mechanical removal efforts, the Channel Catfish population has persisted in the San Juan River. The Trojan Sex Chromosome approach is a promising eradication strategy that proposes the production and release of Trojan sex chromosome carriers (YY) to skew a targeted population’s …

Drought And Diet Breadth: Does Insect Specialization Influence Herbivory When Plants Are Under Stress?, Jakob Palmer

All Graduate Theses and Dissertations, Fall 2023 to Present

Climate change will alter precipitation worldwide, causing more frequent and severe drought events worldwide. Drought affects many ecological processes, including plant-herbivore interactions, which are critical to biodiversity and ecosystem health. A variety of plant characteristics can influence herbivory – such as how hairy, nutritious, or toxic a leaf is – and drought has been shown to alter many of these traits. Unique characteristics of herbivore species are also important: herbivores can either feed on a variety of plants (generalists) or a group of closely related plants (specialists). Specialists can cope with traits of the plants they eat, while generalists are …

Microbes In Pollination Systems: Effects On Pollinator Health, Floral Traits, Nectar Robbing, And Plant Fitness, Valerie Nicole Martin

All Graduate Theses and Dissertations, Fall 2023 to Present

Flowers produce nectar to attract pollinators, but nectar is also a habitat for yeasts and bacteria that arrive via pollinators, robbers, and other visitors. These microbes consume nectar sugars and release byproducts that change the smell and taste of nectar. Whether these changes affect how pollinators find and choose flowers, and whether they ultimately affect how many seeds a plant produces, is not well understood. In this dissertation, I studied how a common nectar yeast and a plant-associated bacterium affect the scent of wildflowers, the behavior of bumble bees and hummingbirds, and plant reproduction in montane meadows in central Colorado. …

Cadmium Biosorption By Fusarium Venenatum And Its Application In Functional Permeable Materials For Metal Removal, Bradley Lawson

All Graduate Theses and Dissertations, Fall 2023 to Present

Heavy metals are pollutants of increasing concern as continued industrialization and urbanization have escalated the discharge of these toxins into aquatic environments. Cadmium (Cd) is a metal of particular concern due to its acute toxicity and high mobility in aquatic ecosystems. Given these characteristics Cd poses significant health risks to both humans and aquatic ecosystems. The continued development of sustainable, low-cost remediation technology is imperative to manage metal pollution.

This research explores the use of fungal-based remediation systems to remove Cd from contaminated water. Living biomass of the filamentous fungus Fusarium venenatum was evaluated as a biosorbent material for Cd …

A Data-Driven Nutrient Density Scoring Framework For Beef Using Principal Component Analysis, Teja Vuppala

All Graduate Theses and Dissertations, Fall 2023 to Present

Beef is one of the most nutrient-rich foods in the human diet, providing high-quality protein, iron, omega-3 fatty acids, B vitamins, and a wide range of other compounds important to health. However, current nutrition scoring systems used on food labels were designed to compare different foods to one another — for example, beef versus broccoli — and do not work well for judging the nutritional quality of different beef samples relative to each other. A grass-fed steak and a conventionally-finished steak can carry nearly identical Nutrition Facts panels while differing substantially in their content of omega-3 fatty acids, vitamins, and …

Behavioral And Landscape Factors Affecting The Effectiveness Of Egg-Bait Management For Common Ravens In The Great Basin, Usa, Sierra L. Pederson

All Graduate Theses and Dissertations, Fall 2023 to Present

Common Ravens have become increasingly common across the Great Basin of the western USA, largely because human activities, such as roads, agriculture, livestock operations, and human-made structures, provide them with abundant food, water, and nesting sites. As raven numbers have grown, so has their impact on vulnerable species like the greater sage-grouse. Like many other ground-nesting species, greater sage-grouse eggs and chicks are especially susceptible to predation. To help reduce raven numbers in sensitive areas, wildlife managers often place hard-boiled chicken eggs treated with a toxin (DRC-1339) on the landscape, expecting that ravens will die after eating these eggs and …

Affective And Cognitive Factors Contributing To Male-Female Differences In Mathematics, Sarah N. Herod

All Graduate Theses and Dissertations, Fall 2023 to Present

Math differences between men and women have been studied for several decades, with original theories suggesting a biological reason for the differences and more new ones suggesting multiple factors, such as self-efficacy, anxiety, and spatial ability, may be responsible for these apparent differences. Additionally, most research into math differences between the sexes involves the use of a composite score, rather than examining the different sub-domains of math separately. The purpose of the current study was to examine the relationship between sex and math performance within the context of an individual's belief and attitudes towards math and spatial information. Seventy-one participants …

'Fast' And 'Slow' Water Handling Strategies Explain Pinyon Pine Decline And Juniper Expansion, M. Faraz Rehman

All Graduate Theses and Dissertations, Fall 2023 to Present

Across the western United States, pinyon and juniper woodlands are changing with pinyon pine trees dying back while juniper becoming more abundant. Previous studies suggested that pinyon may lose more water during drier periods. But water loss is only part of the story. Water inputs, or how plants absorb water, are also likely to be important, but rarely well understood. To better understand this, we measured how pinyon and juniper absorb water from different soil depths and how actively they lose water through their leaves. Measurements were made over two years at three sites that ranged from more dry to …

The Evolution Of Hymenopteran Recombination Rates, Timothy John Delory

All Graduate Theses and Dissertations, Fall 2023 to Present

Individuals of some species mix their DNA frequently when producing sex cells, while others do so much less. Hymenopterans (ants bees and wasps) are especially useful for understanding this variation for several reasons. They show large differences in this frequency of shuffling, or rate of recombination, have well-studied genomes, and vary widely in how they live and reproduce. I capitalized on these features examines how recombination rates have evolved in this group at the trait, and gene level.

First, I revisited long-standing ideas about why recombination rates differ among these species, incorporating more than a decade of new research. This …

Fibrous Protein Biomaterials: Characterization Of Solitary Bee Silk And Cocoons, And Development Of Recombinant Hagfish And Bee Silk Materials, Oran Wasserman

All Graduate Theses and Dissertations, Fall 2023 to Present

This dissertation explores two complementary aspects of fibrous protein biomaterials: the characterization of understudied naturally occurring solitary bee silk and cocoons; and recombinant expression and biomaterial formation of recombinant hagfish intermediate filaments (rHIF) and a single Osmia lignaria Say (Hymenoptera: Megachilidae) silk protein. Some solitary bee species, which make up about 75% of all bee species, spin silk to construct protective cocoons during development. Despite the importance of silk and cocoons to the solitary bees' life history, their properties remain largely unexplored. This dissertation presents a novel method for isolating and testing individual silk fibers without interfering with the development …

Integrating Hydrology And Human Water Footprints: A Case Study Of The Great Salt Lake Basin, Rachel Lynne Seeley

All Graduate Theses and Dissertations, Fall 2023 to Present

Global demand for water is outrunning supply, and how we account for water is part of the problem. Many water management frameworks are based solely on how much physical water moves through rivers, aquifers, and other water bodies, missing the water that is embedded in food and other products a region produces and exports. This study developed a new, generalizable water accounting framework that incorporates this “hidden water,” known as virtual water, into water management and applied the framework in the Great Salt Lake Basin.

The Great Salt Lake is shrinking, and an often-overlooked driver of the lake’s decline is …

Secure Agricultural Futures: Re-Defining And -Imagining Agricultural Water Landscapes In The Us West, Britta L. Schumacher

All Graduate Theses and Dissertations, Fall 2023 to Present

Aridity is swiftly becoming the US West’s new normal. As agricultural communities adjust to persistent growing-season scarcity, they find their livelihoods under increasing threat. This points to the urgency of finding paths toward more secure water futures. A piece of this future puzzle includes water (re-)distribution – taking excess from one place and delivering it to another in need. To begin thinking about (re-)distribution, this dissertation engages with three mixed-methods and multiscale studies. The first study pairs county-level data across the 11 westernmost US states with survey data collected from individual producers in Utah to assess past and current trends …

Viability Assessment Of Bovine Embryos: A Public Dataset And Deep Learning Baselines, Erfan Khayyati

All Graduate Theses and Dissertations, Fall 2023 to Present

Improving the success rates of cattle breeding is essential for sustainable agriculture, global food security, and high-quality livestock production. Currently, determining whether a lab-grown bovine embryo is healthy enough for a successful pregnancy requires highly trained experts to manually evaluate days of continuous time-lapse video footage. This process is not only incredibly time-consuming but also highly subjective; human reviewers often suffer from visual fatigue when tracking subtle, microscopic cellular changes over a seven-day period, leading to significant disagreement among even top experts on an embryo’s true potential. Furthermore, assessing bovine embryos is notoriously difficult due to their dark, lipid-dense cellular …

Divergent Belowground Strategies Of Savanna Grasses Under Varying Fire Regimes, Abigail C. Schmidt

All Graduate Theses and Dissertations, Fall 2023 to Present

Savannas are unique ecosystems, where trees and grasses live together across the landscape, not quite forming full forests or open grasslands. The ability for trees and grass to coexist is largely the result of widespread disturbances, such as fire. Fire in savannas is largely thought of in how it maintains plants above ground, however, fire also plays a key role in ecosystem and plant processes belowground. First, fire can change how soil nutrients, namely phosphorus, are cycled. Phosphorus is a key nutrient that plants need to function, and plants acquire phosphorus through their roots. Frequent fire can enhance phosphorus availability, …

Stability Of The Apogee Galvanic Cell Sensors In The Utah State University Biological Oxygen Demand System, Tia Lawrence, Carson Richards, Bruce Bugbee

Techniques and Instruments

The Utah State University Crop Physiology Laboratory has developed a six-chamber biological oxygen demand (BOD) system to quantify respiration (Kusuma & Bugbee, 2020). Like all instruments, accuracy depends on the ability to get a zero in empty containers. Here we report the signal output and zero stability in empty containers over a five-day interval.

Summer Research Internships In Agricultural Biotechnology For Off-Campus Undergraduate Students, Aaron J. Thomas

Funded Research Records

No abstract provided.

Career: New Insights Into The Ancient Carbon Cycle From Siliceous Deep-Sea Sediments, Donald Penman

Funded Research Records

No abstract provided.

Inhibiting Chikungunya Virus Protease Using Mtase-Like Domain Interactions For Novel Antiviral Therapies, Justin G. Julander

Funded Research Records

No abstract provided.

Mechanistic Determination Of Host Environmental Impacts On Shigella Virulence, Nicholas E. Dickenson

Funded Research Records

No abstract provided.

Integrating Nutrition And Stress Into Life History Stages Of Wild Free-Ranging Female Pronghorn, Cole A. Bleke, Eric M. Gese, Juan J. Villalba, Shane B. Roberts, Susannah S. French

Wildland Resources Student Research

Studies addressing seasonal changes in diet quality and hormones are important for understanding the interactions between ecology and physiology. We collected fecal samples from free-ranging adult female pronghorn (Antilocapra americana) to examine the relationships between indicators of nutrition and glucocorticoid activity. This occurred during three population-level, life-history-correlated sampling periods across five subpopulations. We evaluated nutrition via fecal nitrogen, fecal 2,6-diaminopimelic acid (DAPA), and assessed glucocorticoid activity using fecal glucocorticoid metabolites (FGM). We found positive relationships between fecal nitrogen and DAPA, whereas DAPA and fecal nitrogen with FGM varied in influence and strength, depending upon life history stage. Generally, …

Snap Challenge In Teacher Education, Eric Hogan, Sean Forbes, Carey E. Andrzejewski

Journal on Empowering Teaching Excellence

Access the online Pressbooks version of this article here.

Training pre-service teachers often focuses on educating them about issues they will see in their own classrooms. One such issue is food insecurity. Food insecurity is defined by limited or uncertain access to nutritionally adequate and safe foods or the ability to acquire acceptable foods in socially acceptable ways (Rabbitt et al., 2023a). This article focuses on pre-service teachers' experiences while engaging in the SNAP Challenge to learn more about food insecurity while also learning how food impacts student learning and motivation. Participants in the study discussed how living off the …

Advocating For A Care-Based Ethic: Stories Of Pregnancy And Birth From Caregivers Of Children With Down Syndrome, Lydia Ocasio-Stoutenburg, Nayma Sultana Mim

Developmental Disabilities Network Journal

Down syndrome (DS) impacts about 1 in every 640 childbirths in the United States. While quality of life has improved for people with DS, systemic inequities and deficit-based perceptions have persisted throughout history, with material impacts on people with DS and their caregivers. Researchers have documented how caregivers of children with DS have had negative experiences with healthcare providers and genetic counselors, whose biased views about DS translate into subtle and overt pressures. Few studies explicitly focus on the experiences of Caregivers of Color, multilingual families, as well as families with varying economic experiences who have children with DS. This …

Colostrum Management For Dairy Calves: Key Practices For Calf Health And Performance, Drew Swartz, Jacob Hadfield, Kalen Taylor, Maggi Mathews

All Current Publications

This fact sheet provides practical recommendations for dairy producers to improve colostrum management and support calf health and performance.

Pine Grosbeak (Pinicola Enucleator) Exhibit Collective Vocal Behavior During Foraging Bouts, Stefani A. Crabtree, Thomas J. Crabtree

Environment and Society Faculty Publications

Pine Grosbeaks (Pinicola enucleator) are boreal finches whose winter ecology and social behavior remain only sporadically documented due to their remote distributions and irruptive dispersions. From 18 December 2023 to 6 March 2024, we conducted repeated daily observations of a flock of up to twelve P. Enucleator occupying a temporary wintering range in an urban neighborhood in Oregon. During these observations, we documented a previously undescribed collective vocalization associated with feeding. Comparison with 2674 archived Pine Grosbeak recordings from major bioacoustic repositories revealed that no clear matches between our recording and archives could be established. The low amplitude …

Queer, Hybrid Participatory Design: Relational Practices And Norms For Coalition Building With Rural, Lgbtq+ Communities, Luettamae Lawrence, Maureen Boyle, Chasity Mayo, Catherine A. Rushworth, Moira Anderson, Dorothy Wallis, Jayme Walters

Instructional Technology and Learning Sciences Faculty Publications

This paper examines the first year of collaboration between the Bear River Region LGBTQ+ Community Coalition and queer residents in rural northern Utah, United States, using a hybrid participatory design (PD) approach. Using Yep’s queer relationality theory, we examine how hybrid spaces were designed and iteratively adapted to support inclusion, care, and collective agency among LGBTQ+ community members. Drawing on Community Coalition Action Theory and queer PD, we analyze four cases from May 2024 to June 2025 including workshops and regular meetings to explore how relational practices evolved across different formats and phases of coalition development. In this paper, we …

Colostrum Management For Dairy Calves: Technical Guidelines For Consultant Evaluation And Implementation, Drew Swartz, Jacob Hadfield, Kalen Taylor, Maggi Mathews

All Current Publications

This fact sheet provides a technical overview of colostrum management in dairy calves, including evaluation methods and evidence-based recommendations for consultants, educators, and students.

Creating Sustainable School And Home Gardens: Managing Rainwater, Lawrence Krissek, Kathy Cabe Trundle

All Current Publications

Rainscaping can help solve drainage problems, reduce erosion, improve water quality, and conserve soil by effectively managing rainwater movement across the landscape. It can also provide environments with increased biodiversity while reducing the need for supplemental watering.  The details of rainscaping your garden are very site-specific, affected by the amount of space and money available, your garden’s physical and weather/climate characteristics, and your garden goals. This resource sheet addresses the use of natural methods to ensure efficient rainwater management.

A Provable Semi-Infinite Programming Approach For Solving Constrained Dynamic Games, Tyler C. Gardner, Matthew W. Harris, Logan Lancaster

Mechanical and Aerospace Engineering Student Publications and Presentations

Many engineering problems must account for the non-cooperative decisions and actions of multiple players. These problems can be modeled within a game-theoretic framework. The approach herein is to model such problems as mathematical games, convert them to semi-infinite programs, and utilize a semi-infinite program solver whose output is provably an ϵ-optimal Nash equilibrium. The approach is successfully benchmarked on two low-dimensional problems. Two types of higher-dimensional linear quadratic dynamic games are then investigated: ones where each player’s problem is convex and ones where at least one player’s problem is nonconvex. Within each type, variations based on information structure, control …

Fire–Climate–Vegetation Linkages In A Quaking Aspen Forest During The Late Holocene, R. Justin Derose, Jesse L. Morris

Wildland Resources Faculty Publications

Fire plays an important role in shaping forested ecosystems around the globe. Unlike many other fire-driven forest types, our understanding of pre-settlement fire behavior in quaking aspen (Populus tremuloides) systems is limited. To better understand the frequency and severity of fires in a putatively stable quaking aspen forest, a small, key watershed was selected for sediment coring to reconstruct fire history, vegetation change, and climatic variability. The study aim was to explore the fire–climate–vegetation linkages in an aspen-dominated catchment. For the past ~4000 years this basin has been dominated by quaking aspen but also subalpine fir (Abies …