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Incorporation Of Carbon Dioxide Production And Transport Module Into A Soil-Plant-Atmosphere Continuum Model, Sahila Beegum, Wenguang Sun, Dennis Timlin, Zhuangji Wang, David Fleisher, Vangimalla R. Reddy, Chittaranjan Ray Jun 2023

Incorporation Of Carbon Dioxide Production And Transport Module Into A Soil-Plant-Atmosphere Continuum Model, Sahila Beegum, Wenguang Sun, Dennis Timlin, Zhuangji Wang, David Fleisher, Vangimalla R. Reddy, Chittaranjan Ray

Nebraska Water Center: Faculty Publications

Carbon dioxide release from agricultural soils is influenced by multiple factors, including soil (soil properties, soil-microbial respiration, water content, temperature, soil diffusivity), plant (carbon assimilation, rhizosphere respiration), atmosphere (climate, atmospheric carbon dioxide), etc. Accurate estimation of the carbon dioxide (CO2) fluxes in the soil and soil respiration (CO2 flux between soil and atmosphere) requires a process-based modeling approach that accounts for the influence of all these factors. In this study, a module for CO2 production via root and microbial respiration and diffusion-based carbon dioxide transport is developed and integrated with MAIZSIM (a process-based maize crop growth …


Peer Review Of Teaching: Et Theory, Deficit Irrigation And Consumptive Use, Derek M. Heeren, Saleh Taghvaeian Jun 2023

Peer Review Of Teaching: Et Theory, Deficit Irrigation And Consumptive Use, Derek M. Heeren, Saleh Taghvaeian

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

A BSE Peer Review of Teaching was carried out for a graduate level course on Advanced Irrigation Management. This course has been offered for several years; each time improvements are made, but there is always a need for additional improvement. In particular, ET theory, deficit irrigation, and consumptive use are topics that the students struggle to grasp. These topics involve a relatively high level of math for an MS-level (800-level) Agricultural Systems Technology course, and the available materials on these topics either were not well developed or were not a good fit for this class. The primary objective was to …


Students’ Knowledge Of And Attitudes Toward Dairy Production: A Survey Methodology Report, Heather Akin, Babatope Akinyemi, Julia Mcquillan, Tami Brown-Brandl Jun 2023

Students’ Knowledge Of And Attitudes Toward Dairy Production: A Survey Methodology Report, Heather Akin, Babatope Akinyemi, Julia Mcquillan, Tami Brown-Brandl

Department of Agricultural Leadership, Education, and Communication: Faculty Publications

This report presents findings from a pilot survey conducted among undergraduate and graduate students (N = 410) at the University of Nebraska-Lincoln about students’ perspectives on technology usage, consumption, and sustainability in dairy production systems. An interdisciplinary research team developed the survey instrument and report. The main purpose of this pilot study was to create and administer survey items to support further research on experiential education and outreach opportunities related to robotics in small-scale dairy production and rural economic development. Descriptive findings indicated that most students had some familiarity with dairy production and the nutritional aspects of dairy products …


Search For Nonresonant Higgs Boson Pair Production In The Four Leptons Plus Twob Jets Final State In Proton-Proton Collisions At √S = 13 Tev, A. Tumasyan Jun 2023

Search For Nonresonant Higgs Boson Pair Production In The Four Leptons Plus Twob Jets Final State In Proton-Proton Collisions At √S = 13 Tev, A. Tumasyan

Department of Physics and Astronomy: Faculty Publications

The first search for nonresonant production of Higgs boson pairs (HH) with one H decaying into four leptons and the other into a pair of b quarks is presented, using proton-proton collisions recorded at a center-of-mass energy of √s = 13 TeV by the CMS experiment. The analyzed data correspond to an integrated luminosity of 138 fb−1. A 95% confidence level upper limit of 32.4 is set on the signal strength modifier μ, defined as the ratio of the observed HH production rate in the HH ⟶ ZZ*b[] ⟶ 4ℓb[] decay channel to the standard model (SM) …


Search For Nonresonant Higgs Boson Pair Production In The Four Leptons Plus Twob Jets Final State In Proton-Proton Collisions At √S = 13 Tev, Armen R. Tumasyan, Cma Collaboration Jun 2023

Search For Nonresonant Higgs Boson Pair Production In The Four Leptons Plus Twob Jets Final State In Proton-Proton Collisions At √S = 13 Tev, Armen R. Tumasyan, Cma Collaboration

Department of Physics and Astronomy: Faculty Publications

The first search for nonresonant production of Higgs boson pairs (HH) with one H decaying into four leptons and the other into a pair of b quarks is presented, using proton-proton collisions recorded at a center-of-mass energy of √s = 13 TeV by the CMS experiment. The analyzed data correspond to an integrated luminosity of 138 fb−1. A 95% confidence level upper limit of 32.4 is set on the signal strength modifier μ, defined as the ratio of the observed HH production rate in the HH ⟶ ZZ*bb[bar] ⟶ 4ℓb[bar] decay channel to the standard model (SM) …


Defining Open Scholarly Infrastructure: A Review Of Relevant Literature, Saman Goudarzi, Richard Dunks Jun 2023

Defining Open Scholarly Infrastructure: A Review Of Relevant Literature, Saman Goudarzi, Richard Dunks

Copyright, Fair Use, Scholarly Communication, etc.

This report outlines IOI’s initial attempt towards a framework for understanding open infrastructure for research and scholarship. For this report, we examined a body of literature that includes works across the fields of anthropology, scholarly communications, international development studies, science and technology studies, and infrastructure studies. ....

This review also makes clear that the distinguishing feature between open infrastructure and its commercially-run and -operated counterparts is the fact that its value lies not just in its ability to support productive functions but how it fosters positive and desirable social practices and values. It is insufficient to simply assert certain values …


A Flexible Ot Testbed For Evaluating On-Device Implementations Of Iec-61850 Goose, Matthew Boeding, Michael Hempel, Hamid Sharif, Juan Lopez Jr., Kalyan Perumalla Jun 2023

A Flexible Ot Testbed For Evaluating On-Device Implementations Of Iec-61850 Goose, Matthew Boeding, Michael Hempel, Hamid Sharif, Juan Lopez Jr., Kalyan Perumalla

Department of Electrical and Computer Engineering: Faculty Publications

The growing convergence of Information Technology and Operational Technology has enhanced communication and visibility across power grids. This, coupled with the growing use of Distributed Energy Resources in power grids, has enhanced the grid capabilities while also creating a larger attack surface for malicious actors. A common protocol vulnerable to these attacks is the IEC-61850 GOOSE protocol due to its low-latency requirements, multicast packet delivery method, and lack of encryption. In this paper, we evaluate the security implications of different hardware implementations of this protocol by contrasting device response and recovery of two commercial off-the-shelf Intelligent Electronic Devices from separate …


Agris: Wind-Adaptive Wideband Reconfigurable Intelligent Surfaces For Resilient Wireless Agricultural Networks At Millimeter-Wave Spectrum, Shuai Nie, M. C. Vuran Jun 2023

Agris: Wind-Adaptive Wideband Reconfigurable Intelligent Surfaces For Resilient Wireless Agricultural Networks At Millimeter-Wave Spectrum, Shuai Nie, M. C. Vuran

School of Computing: Faculty Publications

Wireless networks in agricultural environments are unique in many ways. Recent measurements reveal that the dynamics of crop growth impact wireless propagation channels with a long-term seasonal pattern. Additionally, short-term environmental factors, such as strong wind, result in variations in channel statistics. Next-generation agricultural fields, populated by autonomous tractors, drones, and high-throughput sensing systems, require high-throughput connectivity infrastructure, resulting in the future deployment of high-frequency networks, where they have not been deployed before. More specifically, when millimeter-wave (mmWave) communication systems, a viable candidate for 5G and 6G high-throughput solutions, are deployed for higher throughput, these issues become more prominent due …


Maize Nitrogen Uptake, Grain Nitrogen Concentration And Root-Zone Residual Nitrate Nitrogen Response Under Center Pivot, Subsurface Drip And Surface (Furrow) Irrigation, Suat Irmak, Ali T. Mohammed, Matthew Drudik Jun 2023

Maize Nitrogen Uptake, Grain Nitrogen Concentration And Root-Zone Residual Nitrate Nitrogen Response Under Center Pivot, Subsurface Drip And Surface (Furrow) Irrigation, Suat Irmak, Ali T. Mohammed, Matthew Drudik

Department of Agricultural and Biological Systems Engineering: Faculty Publications

While the impact(s) of irrigation and nitrogen (N) levels on crop yields have been investigated separately, research lacks about how different irrigation methods coupled with different N application timing strategies under full and limited irrigation levels effect yield, soil nitrate nitrogen (NO3-N) residual and stover N uptake. Knowledge of these dynamics can help to establish effective water and N management guidelines for the same crop under different irrigation methods and irrigation levels. This research investigated maize (Zea mays L.) residual soil NO3-N concentration and stover and grain N uptake response to water under different irrigation …


Ten Principles For Bird-Friendly Forestry: Conservation Approaches In Natural Forests Used For Timber Production, Nico Arcilla, Māris Strazds Jun 2023

Ten Principles For Bird-Friendly Forestry: Conservation Approaches In Natural Forests Used For Timber Production, Nico Arcilla, Māris Strazds

Center for Great Plains Studies: Staff and Fellows Publications

Bird–forestry relationships have been the subject of research and conservation initiatives for decades, but there are few reviews of resulting recommendations for use by forest managers. We define “bird-friendly forestry” as forest management that applies recommendations from research seeking to reconcile logging with bird conservation in natural forests used for timber production. We reviewed relevant studies to synthesize 10 principles of bird-friendly forestry: (1) protect and enhance vertical structure through uneven-aged silviculture; (2) leave abundant dead wood in different decay stages; (3) maintain residual large green trees; (4) create and maintain sufficient amounts of uncut reserves and corridors; (5) maximize …


Restoration Of Normal Blood Flow In Atherosclerotic Arteries Promotes Plaque Stabilization, Morgan A. Schake, Ian Mccue, Evan T. Curtis, Thomas J. Ripperda Jr., Samuel Harvey, Bryan T. Hackfort, Anna Fitzwater, Yiannis S. Chatzizisis, Forrest Kievit, Ryan M. Pedrigi Jun 2023

Restoration Of Normal Blood Flow In Atherosclerotic Arteries Promotes Plaque Stabilization, Morgan A. Schake, Ian Mccue, Evan T. Curtis, Thomas J. Ripperda Jr., Samuel Harvey, Bryan T. Hackfort, Anna Fitzwater, Yiannis S. Chatzizisis, Forrest Kievit, Ryan M. Pedrigi

Department of Mechanical and Materials Engineering: Faculty Publications

Blood flow is a key regulator of atherosclerosis. Disturbed blood flow promotes atherosclerotic plaque development, whereas normal blood flow protects against plaque development. We hypothesized that normal blood flow is also therapeutic, if it were able to be restored within atherosclerotic arteries. Apolipoprotein E-deficient (ApoE-/-) mice were initially instrumented with a blood flow-modifying cuff to induce plaque development and then five weeks later the cuffwas removed to allowrestoration of normal blood flow. Plaques in decuffed mice exhibited compositional changes that indicated increased stability compared to plaques in mice with the cuff maintained. The therapeutic benefit of decuffingwas comparable …


Protocol To Develop A Synthetic Biology Toolkit For The Non-Model Bacterium R. Palustris, Mark Kathol, Cheryl Immethun, Rajib Saha Jun 2023

Protocol To Develop A Synthetic Biology Toolkit For The Non-Model Bacterium R. Palustris, Mark Kathol, Cheryl Immethun, Rajib Saha

Department of Chemical and Biomolecular Engineering: Faculty Publications

Numerous biology tools are developed to work for model organisms, which, however, do not work effectively in non-model organisms. Here, we present a protocol for developing a synthetic biology toolkit for Rhodopseudomonas palustris CGA009, a non-model bacterium with unique metabolic properties. We describe steps for introducing and characterizing biological devices in nonmodel bacteria, such as the utilization of fluorescence markers and RT-qPCR. This protocol may also be applicable for other non-model organisms. For complete details on the use and execution of this protocol, please refer to Immethun et al..1


A Complete Telomere-To-Telomere Assembly Of The Maize Genome, Jian Chen, Zijian Wang, Kaiwen Tan, Wei Huang, Junpeng Shi, Tong Li, Jiang Hu, Kai Wang, Chao Wang, Beibei Xin, Haiming Zhao, Weibin Song, Matthew B. Hufford, James C. Schnable, Weiwei Jin, China Agricultural University, Hainan Yazhou Bay Seed Laboratory Jun 2023

A Complete Telomere-To-Telomere Assembly Of The Maize Genome, Jian Chen, Zijian Wang, Kaiwen Tan, Wei Huang, Junpeng Shi, Tong Li, Jiang Hu, Kai Wang, Chao Wang, Beibei Xin, Haiming Zhao, Weibin Song, Matthew B. Hufford, James C. Schnable, Weiwei Jin, China Agricultural University, Hainan Yazhou Bay Seed Laboratory

Department of Agronomy and Horticulture: Faculty Publications

A complete telomere-to-telomere (T2T) finished genome has been the long pursuit of genomic research. Through generating deep coverage ultralong Oxford Nanopore Technology (ONT) and PacBio HiFi reads, we report here a complete genome assembly of maize with each chromosome entirely traversed in a single contig. The 2,178.6 Mb T2T Mo17 genome with a base accuracy of over 99.99% unveiled the structural features of all repetitive regions of the genome. There were several super-long simple-sequence-repeat arrays having consecutive thymine–adenine– guanine (TAG) tri-nucleotide repeats up to 235 kb. The assembly of the entire nucleolar organizer region of the 26.8 Mb array with …


Long-Term Degradation Mechanisms In Application-Implemented Radical Thin Films, Ewa Malgorzata Nowik-Boltyk, Tobias Junghoefer, Mathias Glaser, Erika Giangrisostomi, Ruslan Ovsyannikov, Shuyang Zhang, Chan Shu, Andrzej Rajca, Arrigo Calzolari, M. Benedetta Casu Jun 2023

Long-Term Degradation Mechanisms In Application-Implemented Radical Thin Films, Ewa Malgorzata Nowik-Boltyk, Tobias Junghoefer, Mathias Glaser, Erika Giangrisostomi, Ruslan Ovsyannikov, Shuyang Zhang, Chan Shu, Andrzej Rajca, Arrigo Calzolari, M. Benedetta Casu

Department of Chemistry: Faculty Publications

Blatter radical derivatives are very attractive due to their potential applications, ranging from batteries to quantum technologies. In this work, we focus on the latest insights regarding the fundamental mechanisms of radical thin film (long-term) degradation, by comparing two Blatter radical derivatives. We find that the interaction with different contaminants (such as atomic H, Ar, N, and O and molecular H2, N2, O2, H2O, and NH2) affects the chemical and magnetic properties of the thin films upon air exposure. Also, the radical-specific site, where the contaminant interaction takes place, plays …


Stepwise Assembly Of Quinary Multivariate Metal−Organic Frameworks Via Diversified Linker Exchange And Installation, Yuchen Hu, Xin Zhang, Rebecca Shu Hui Khoo, Christian Fiankor, Xu Zhang, Jian Zhang Jun 2023

Stepwise Assembly Of Quinary Multivariate Metal−Organic Frameworks Via Diversified Linker Exchange And Installation, Yuchen Hu, Xin Zhang, Rebecca Shu Hui Khoo, Christian Fiankor, Xu Zhang, Jian Zhang

Department of Chemistry: Faculty Publications

Multivariate MOFs (MTV-MOFs) constructed from multiple components with atomistic precision hold the promise for many fascinating developments in both fundamental sciences and applications. Sequential linker installation can be an effective method to introduce different functional linkers into an MOF that contains coordinatively unsaturated metal sites. However, in many cases, these linkers must be installed according to a specific sequence and the complete synthetic flexibility and freedom is yet to be realized. Here, we rationally decreased the size of the primary ligand used in NPF-300, a Zr-MOF with scu topology (NPF = Nebraska Porous Framework), and synthesized its isostructure, NPF-320. NPF-320 …


Floodwater Drainage Assessment Of Offutt Air Force Base, Nebraska, 2020–22, Christopher M. Hobza Jun 2023

Floodwater Drainage Assessment Of Offutt Air Force Base, Nebraska, 2020–22, Christopher M. Hobza

United States Geological Survey: Water Reports and Publications

Offutt Air Force Base, south of Omaha, Nebraska, experienced major flooding during the March 2019 flood event because of the proximity of the base to the confluence of the Missouri River and nearby tributaries, which exceeded flood stages. Postflood, standing water remained through much of the year, attracting waterfowl and other birds and posing a major safety risk to aircraft. The United States Geological Survey, in cooperation with the United States Air Force, began a study in 2020 to describe the hydrologic processes that affect the persistence of standing water on Offutt Air Force Base.

Existing site data, reviewed in …


Nonlinear Impact-Echo Test For Quantitative Evaluation Of Asr Damage In Concrete, Clayton Malone, Hongbin Sun, Jinying Zhu Jun 2023

Nonlinear Impact-Echo Test For Quantitative Evaluation Of Asr Damage In Concrete, Clayton Malone, Hongbin Sun, Jinying Zhu

Department of Civil and Environmental Engineering: Faculty Publications

Nonlinear acoustic methods demonstrate high sensitivity for concrete damage evaluation. Among these methods, nonlinear resonance acoustic methods have been widely used in laboratory tests on small scale test samples. In this study, a nonlinear impact-echo (IE) method was proposed for concrete damage evaluation, in which the IE frequency shift was measured at different impact force levels. The nonlinear IE test is similar to the nonlinear impact resonance acoustic spectroscopy (NIRAS) test in the experimental setup and analysis method. How- ever, the nonlinear IE test excites a local thickness resonance mode of a member instead of the global resonance vibration. Therefore, …


Nonlinear Impact-Echo Test For Quantitative Evaluation Of Asr Damage In Concrete, Clayton Malone, Hongbin Sun, Jinying Zhu Jun 2023

Nonlinear Impact-Echo Test For Quantitative Evaluation Of Asr Damage In Concrete, Clayton Malone, Hongbin Sun, Jinying Zhu

Department of Civil and Environmental Engineering: Faculty Publications

Nonlinear acoustic methods demonstrate high sensitivity for concrete damage evaluation. Among these methods, nonlinear resonance acoustic methods have been widely used in laboratory tests on small scale test samples. In this study, a nonlinear impact-echo (IE) method was proposed for concrete damage evaluation, in which the IE frequency shift was measured at different impact force levels. The nonlinear IE test is similar to the nonlinear impact resonance acoustic spectroscopy (NIRAS) test in the experimental setup and analysis method. How- ever, the nonlinear IE test excites a local thickness resonance mode of a member instead of the global resonance vibration. Therefore, …


Toward Low Carbon Footprint And Lightweight Masonry Alkali-Activated Material, Zina Ebrahim, Mohammad Mastali, Marc Maguire Jun 2023

Toward Low Carbon Footprint And Lightweight Masonry Alkali-Activated Material, Zina Ebrahim, Mohammad Mastali, Marc Maguire

Durham School of Architectural Engineering and Construction: Faculty Publications

The portland cement concrete industry and the masonry industry are undergoing changes in response to skilled labor shortages and concerns over climate and pollution. There may be interest from parts of the industry in lower carbon footprint and lightweight masonry products. Toward this aim, the use of hemp shiv--the woody core of the hemp plant--in alkali-activated concrete was investigated herein and shown to have a wide range of impacts on the hardened state characteristics of a material suitable for structural concrete masonry units (CMUs) in accordance with ASTM C90 requirements. Hemp shiv is well known for its use in hempcrete, …


Optical Characterization Of Isothermal Spin State Switching In An Fe(Ii) Spin Crossover Molecular And Polymer Ferroelectric Bilayer, Saeed Yazdani, Kourtney Collier, Grace Yang, Jared Phillips, Ashley Dale, Aaron Mosey, Samuel Grocki, Jian Zhang, Anne E. Shanahan, Ruihua Cheng, Peter A. Dowben Jun 2023

Optical Characterization Of Isothermal Spin State Switching In An Fe(Ii) Spin Crossover Molecular And Polymer Ferroelectric Bilayer, Saeed Yazdani, Kourtney Collier, Grace Yang, Jared Phillips, Ashley Dale, Aaron Mosey, Samuel Grocki, Jian Zhang, Anne E. Shanahan, Ruihua Cheng, Peter A. Dowben

Department of Physics and Astronomy: Faculty Publications

Using optical characterization, it is evident that the spin state of the spin crossover molecular complex [Fe{H2B(pz)2}2(bipy)] (pz = tris(pyrazol-1-1y)-borohydride, bipy = 2,2′-bipyridine) depends on the electric polarization of the adjacent polymer ferroelectric polyvinylidene fluoride-hexafluoropropylene (PVDF-HFP) thin film. The role of the PVDF-HFP thin film is significant but complex. The UV–Vis spectroscopy measurements reveals that room temperature switching of the electronic structure of [Fe{H2B(pz)2}2(bipy)] molecules in bilayers of PVDF-HFP/[Fe{H2B(pz)2}2(bipy)] occurs as a function of ferroelectric polarization. The retention of voltage-controlled nonvolatile changes …


Cometrics: A New Software Tool For Behavior‑Analytic Clinicians And Machine Learning Researchers, Walker S. Arce, Seth G. Walker, Morgan L. Hurtz Jun 2023

Cometrics: A New Software Tool For Behavior‑Analytic Clinicians And Machine Learning Researchers, Walker S. Arce, Seth G. Walker, Morgan L. Hurtz

Department of Electrical and Computer Engineering: Faculty Publications

Cometrics is a Microsoft Windows compatible clinical tool for the collection and recording of frequency- and duration-based target behaviors, physiological signals, and video data. This software package is designed to record in-vivo observational and physiological data. In addition, we have included features that allow observers to capture video from real-time camera feeds and import saved video for retroactive data collection. By using Microsoft Excel-based spreadsheets, also called keystroke files, assessment and treatment sessions are exported into a single document using the click of a button. Integrated interobserver agreement metrics allow comparisons across primary and reliability observers, with the output exported …


How Land Surface Characteristics Influence The Development Of Flash Drought Through The Drivers Of Soil Moisture And Vapor Pressure Deficit, Lauren E. L. Lowman, Jordan I. Christian, Eric Hunt Jun 2023

How Land Surface Characteristics Influence The Development Of Flash Drought Through The Drivers Of Soil Moisture And Vapor Pressure Deficit, Lauren E. L. Lowman, Jordan I. Christian, Eric Hunt

School of Natural Resources: Faculty Publications

As global mean temperature rises, extreme drought events are expected to increasingly affect regions of the United States that are crucial for agriculture, forestry, and natural ecology. A pressing need is to understand and anticipate the conditions under which extreme drought causes catastrophic failure to vegetation in these areas. To better predict drought impacts on ecosystems, we first must understand how specific drivers, namely, atmospheric aridity and soil water stress, affect land surface processes during the evolution of flash drought events. In this study, we evaluated when vapor pressure deficit (VPD) and soil moisture thresholds corresponding to photosynthetic shutdown were …


The Association Between Drought Exposure And Respiratory-Related Mortality In The United States From 2000 To 2018, Yeongjin Gwon, Yuanyuan Ji, Jesse E. Bell, Azar M. Abadi, Jesse D. Berman, Austin Rau, Ronald D. Leeper, Jared Rennie Jun 2023

The Association Between Drought Exposure And Respiratory-Related Mortality In The United States From 2000 To 2018, Yeongjin Gwon, Yuanyuan Ji, Jesse E. Bell, Azar M. Abadi, Jesse D. Berman, Austin Rau, Ronald D. Leeper, Jared Rennie

Daugherty Water for Food Global Institute: Faculty Publications

Climate change has brought increasing attention to the assessment of health risks associated with climate and extreme events. Drought is a complex climate phenomenon that has been increasing in frequency and severity both locally and globally due to climate change. However, the health risks of drought are often overlooked, especially in places such as the United States, as the pathways to health impacts are complex and indirect. This study aims to conduct a comprehensive assessment of the effects of monthly drought exposure on respiratory mortality for NOAA climate regions in the United States from 2000 to 2018. A two-stage model …


Coupling Dendroecological And Remote Sensing Techniques To Assess The Biophysical Traits Of Juniperus Virginiana And Pinus Ponderosa Within The Semi-Arid Grasslands Of The Nebraska Sandhills, R. Allen, Anastasios Mazis, Brian Wardlow, P. Cherubini, J. Hiller, David A. Wedin, Tala Awada Jun 2023

Coupling Dendroecological And Remote Sensing Techniques To Assess The Biophysical Traits Of Juniperus Virginiana And Pinus Ponderosa Within The Semi-Arid Grasslands Of The Nebraska Sandhills, R. Allen, Anastasios Mazis, Brian Wardlow, P. Cherubini, J. Hiller, David A. Wedin, Tala Awada

School of Natural Resources: Faculty Publications

Woody species encroachment is occurring within the semi-arid grasslands of the Nebraska Sandhills U.S., primarily driven by native Juniperus virginiana and Pinus ponderosa, altering ecosystems and the services they provide. Effective, low cost, and cross-scale monitoring of woody species growth and performance is necessary for integrated grassland and forest management in the face of climate variability and change. In this study, we sought to establish a relationship between remote sensing-derived vegetation indices (VIs), tree dendrochronological (raw and standardized tree ring width) measurements, and the abiotic environment [(precipitation, temperature, Palmer Drought Severity Index (PDSI), and soil water content (0–300 cm …


Movement Of Striacosta Albicosta (Smith) (Lepidoptera: Noctuidae) Larvae On Transgenic Bt And Non-Bt Maize, Débora G. Montezano, Thomas E. Hunt, Priscila M. Colombo Da Luz, Kelsey Karnik, Stephen D. Kachman, Ana Maria Velez, Julie A. Peterson Jun 2023

Movement Of Striacosta Albicosta (Smith) (Lepidoptera: Noctuidae) Larvae On Transgenic Bt And Non-Bt Maize, Débora G. Montezano, Thomas E. Hunt, Priscila M. Colombo Da Luz, Kelsey Karnik, Stephen D. Kachman, Ana Maria Velez, Julie A. Peterson

Department of Entomology: Faculty Publications

Exposure of lepidopteran pests to Bacillus thuringiensis (Bt) proteins has been shown to affect the behavior of larvae, including increased movement and avoidance of Bt-expressing plants or diet. Therefore, we hypothesized that the behavior of western bean cutworm, Striacosta albicosta (Smith) (Lepidoptera: Noctuidae), an important pest of maize, could be affected when exposed to Bt plants. To test this hypothesis, we conducted a series of artificial arena and on-plant experiments to determine S. albicosta neonate behavior when exposed to Bt and non-Bt plant tissue. Video tracking experiments presented neonate larvae with the choice of Bt or non- …


Addressing Secondary Traumatic Stress, Burnout, Resilience And Turnover In The Child Welfare Workforce: Results From A 6-Month, Cluster-Randomized Control Trial Of Resilience Alliance, Rebecca Orsi-Hunt, Courtney L. Harrison, Kayla E. Rockwell, Anita P. Barbee Jun 2023

Addressing Secondary Traumatic Stress, Burnout, Resilience And Turnover In The Child Welfare Workforce: Results From A 6-Month, Cluster-Randomized Control Trial Of Resilience Alliance, Rebecca Orsi-Hunt, Courtney L. Harrison, Kayla E. Rockwell, Anita P. Barbee

QIC-WD Journal Articles

Introduction: US child welfare agencies have historically struggled with workforce retention and turnover. As part of the Quality Improvement Center for Workforce Development in Child Welfare, we tested an adaptation of the Resilience Alliance (RA) model in a large, Midwestern state to address workplace stress, burnout and actual workforce turnover. RA is a 24-week, facilitated program designed to mitigate the impact of secondary traumatic stress among child welfare professionals, and to therefore increase job satisfaction, resilience and optimism and to decrease turnover, stress reactivity and burnout.

Methods: Supervisory units of caseworkers and supervisors were randomized to the RA treatment …


Next-Generation Sequencing Data-Based Association Testing Of A Group Of Genetic Markers For Complex Responses Using A Generalized Linear Model Framework, Zheng Xu, Song Yan, Cong Wu, Qing Duan, Sixia Chen, Yun Li Jun 2023

Next-Generation Sequencing Data-Based Association Testing Of A Group Of Genetic Markers For Complex Responses Using A Generalized Linear Model Framework, Zheng Xu, Song Yan, Cong Wu, Qing Duan, Sixia Chen, Yun Li

School of Computing: Faculty Publications

To study the relationship between genetic variants and phenotypes, association testing is adopted; however, most association studies are conducted by genotype-based testing. Testing methods based on next-generation sequencing (NGS) data without genotype calling demonstrate an advantage over testing methods based on genotypes in the scenarios when genotype estimation is not accurate. Our objective was to develop NGS data-based methods for association studies to fill the gap in the literature. Single-variant testing methods based on NGS data have been proposed, including our previously proposed single-variant NGS data-based testing method, i.e., UNC combo method. The NGS data-based group testing method has been …


Curated And Harmonized Gut Microbiome 16s Rrna Amplicon Data From Dietary Fiber Intervention Studies In Humans, Cynthia I. Rodriguez, Ali Keshavarzian, Bruce R. Hamaker, Feitong Liu, Genelle R. Lunken, Heather Rasmussen, Hongwei Zhou, Julien Tap, Kelly S. Swanson, Maria Ukhanova, Marion Leclerc, Martin Gotteland, Paola Navarrete, Petia Kovatcheva-Datchary, Wendy J. Dahl, Jennifer B. H. Martiny Jun 2023

Curated And Harmonized Gut Microbiome 16s Rrna Amplicon Data From Dietary Fiber Intervention Studies In Humans, Cynthia I. Rodriguez, Ali Keshavarzian, Bruce R. Hamaker, Feitong Liu, Genelle R. Lunken, Heather Rasmussen, Hongwei Zhou, Julien Tap, Kelly S. Swanson, Maria Ukhanova, Marion Leclerc, Martin Gotteland, Paola Navarrete, Petia Kovatcheva-Datchary, Wendy J. Dahl, Jennifer B. H. Martiny

Department of Nutrition and Health Sciences: Faculty Publications

Next generation amplicon sequencing has created a plethora of data from human microbiomes. The accessibility to this scientific data and its corresponding metadata is important for its reuse, to allow for new discoveries, verification of published results, and serving as path for reproducibility. Dietary fiber consumption has been associated with a variety of health benefits that are thought to be mediated by gut microbiota. To enable direct comparisons of the response of the gut microbiome to fiber, we obtained 16S rRNA sequencing data and its corresponding metadata from 11 fiber intervention studies for a total of 2,368 samples. We provide …


Next-Generation Sequencing Data-Based Association Testing Of A Group Of Genetic Markers For Complex Responses Using A Generalized Linear Model Framework, Zheng Xu, Song Yan, Cong Wu, Qing Duan, Sixia Chen, Yun Li Jun 2023

Next-Generation Sequencing Data-Based Association Testing Of A Group Of Genetic Markers For Complex Responses Using A Generalized Linear Model Framework, Zheng Xu, Song Yan, Cong Wu, Qing Duan, Sixia Chen, Yun Li

School of Computing: Faculty Publications

To study the relationship between genetic variants and phenotypes, association testing is adopted; however, most association studies are conducted by genotype-based testing. Testing methods based on next-generation sequencing (NGS) data without genotype calling demonstrate an advantage over testing methods based on genotypes in the scenarios when genotype estimation is not accurate. Our objective was to develop NGS data-based methods for association studies to fill the gap in the literature. Single-variant testing methods based on NGS data have been proposed, including our previously proposed single-variant NGS data-based testing method, i.e., UNC combo method. The NGS data-based group testing method has been …


Family Strengths Among Native American Families And Families Living In Poverty: Preventing Adverse Childhood Experiences, Natira Mullet, Emily A. Waterman, Katie Edwards, Briana Simon, Skyler Hopfauf, Ramona Herrington Jun 2023

Family Strengths Among Native American Families And Families Living In Poverty: Preventing Adverse Childhood Experiences, Natira Mullet, Emily A. Waterman, Katie Edwards, Briana Simon, Skyler Hopfauf, Ramona Herrington

Nebraska Center for Research on Children, Youth, Families, and Schools: Faculty Publications

Objective: The purpose of this study was to understand how youth, caregivers, and community professionals perceive family strengths and adverse childhood experiences (ACEs) in their community. Specifically, this study was focused on the protective role of caregivers and families, positive youth development, and how Native American families and families living in poverty support adolescents’ social–emotional development and help them thrive in the face of adversity.

Background: Research documents the concerning rates and negative outcomes of ACEs. However, very little research has examined the views of families and professionals on how to prevent ACES among these populations.

Method: Participants were youth …